Pregenerated sensors for FHL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000022267Ensembl transcript IDs: ENST00000370674.3, ENST00000394153.6, ENST00000394155.8, ENST00000420362.5, ENST00000477080.1, ENST00000477204.5, ENST00000543669.5, ENST00000626004.1, ENST00000628568.1, ENST00000629039.2, ENST00000630278.2, ENST00000630677.1, ENST00000651089.1, ENST00000652745.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCCCCGGCCTCAGCGAGGCCGCCGAAGCCGCAGTACCCAGCCCTaGAAGGCCAGGCAGCCGGGACCGCAGGGACCAGCCCCGAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GPRPQRGRRSRSTQP*KARQPGPQGPAPSG Trigger: GCCGCTCGGGGCTGGTCCCTGCGGTCCCGGCTGCCTGGCCTTCCAGGGCTGGGTACTGCGGCTTCGGCGGCCTCGCTGAGGCCGGGGGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000420362.5 ENST00000651089.1 |
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| CDS GCA 90 bp | ACTGCAGTGAGCCACGATCGTCACTGTTTTCCAGCTGCGTGGGGATaGTCGCCCGCGCAGCTGTCTCGGCGGCGGCGGCCGCTGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: TAVSHDRHCFPAAWG*SPAQLSRRRRPLPA Trigger: TGCAGGCAGCGGCCGCCGCCGCCGAGACAGCTGCGCGGGCGAGCATCCCCACGCAGCTGGAAAACAGTGACGATCGTGGCTCACTGCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652745.1 |
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| CDS GCA 90 bp | GGAGGTCAAGACTGCAGTGAGCCACGATCGTCACTGTTTTCCAGCTaGGTGGGGATGCTCGCCCGCGCAGCTGTCTCGGCGGCGGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GGQDCSEPRSSLFSS*VGMLARAAVSAAAA Trigger: GGCCGCCGCCGCCGAGACAGCTGCGCGGGCGAGCATCCCCACGCAGCTGGAAAACAGTGACGATCGTGGCTCACTGCAGTCTTGACCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652745.1 |
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| CDS CCA 90 bp | GTCAAGACTGCAGTGAGCCACGATCGTCACTGTTTTCCAGCTGCGTaGGGATGCTCGCCCGCGCAGCTGTCTCGGCGGCGGCGGCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: VKTAVSHDRHCFPAA*GCSPAQLSRRRRPL Trigger: CAGCGGCCGCCGCCGCCGAGACAGCTGCGCGGGCGAGCATCCCCACGCAGCTGGAAAACAGTGACGATCGTGGCTCACTGCAGTCTTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652745.1 |
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| CDS CCA 90 bp | ATGATAAGCAAGCCCACATCACGTCTGCCCTCAGGGCCTCCTCCCTaGGAACCCGGGGTGGGAAGGAGGCAGTACCTGCCACAATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: MISKPTSRLPSGPPP*EPGVGRRQYLPQWP Trigger: AGGCCATTGTGGCAGGTACTGCCTCCTTCCCACCCCGGGTTCCCAGGGAGGAGGCCCTGAGGGCAGACGTGATGTGGGCTTGCTTATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477080.1 ENST00000477204.5 |
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| CDS CCA 90 bp | CGGAGGTTGGCGCTGGGAAACAGGGTGAGAGGCAAGCGTTTCCCGTaGCACACTGGGGGCTTCCTAGCTTTAGAGACTGGGTGGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: RRLALGNRVRGKRFP*HTGGFLALETGWLT Trigger: AGTGAGCCACCCAGTCTCTAAAGCTAGGAAGCCCCCAGTGTGCCACGGGAAACGCTTGCCTCTCACCCTGTTTCCCAGCGCCAACCTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000394155.8 ENST00000630677.1 ENST00000651089.1 |
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| CDS TCA 90 bp | GGCAAAGCGGCGCGTGGCGTCTCATTCACTCAGCATTCAGTTTACTaGGCCCTCGCCATGTGCCAAGCTCAGTGCCGGGCTCTGGTGATA | + |
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Preference number: 5 (lower is better) Translates to: GKAARGVSFTQHSVY*ALAMCQAQCRALVI Trigger: TATCACCAGAGCCCGGCACTGAGCTTGGCACATGGCGAGGGCTCAGTAAACTGAATGCTGAGTGAATGAGACGCCACGCGCCGCTTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS TCA 90 bp | GCTGAAGCAGAGGGATTGTTTGCGCCCAGGAGGTCAAGACTGCAGTaGGCCACGATCGTCACTGTTTTCCAGCTGCGTGGGGATGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: AEAEGLFAPRRSRLQ*ATIVTVFQLRGDAR Trigger: GCGAGCATCCCCACGCAGCTGGAAAACAGTGACGATCGTGGCTCACTGCAGTCTTGACCTCCTGGGCGCAAACAATCCCTCTGCTTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652745.1 |
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| CDS CCA 90 bp | AGCGTTTTAACGTCACTCAGAAAGCACCGATGGCAAAGCGGCGCGTaGCGTCTCATTCACTCAGCATTCAGTTTACTGAGCCCTCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SVLTSLRKHRWQSGA*RLIHSAFSLLSPRH Trigger: ATGGCGAGGGCTCAGTAAACTGAATGCTGAGTGAATGAGACGCCACGCGCCGCTTTGCCATCGGTGCTTTCTGAGTGACGTTAAAACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS CCA 90 bp | AGTGCCACCATCCAGAGCGTTTTAACGTCACTCAGAAAGCACCGATaGCAAAGCGGCGCGTGGCGTCTCATTCACTCAGCATTCAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: SATIQSVLTSLRKHR*QSGAWRLIHSAFSL Trigger: TAAACTGAATGCTGAGTGAATGAGACGCCACGCGCCGCTTTGCCATCGGTGCTTTCTGAGTGACGTTAAAACGCTCTGGATGGTGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS TCA 90 bp | CTAGAGGAATATTTAGAGGGGTTGCCATGGAGACGAGGTGCCCTGTaGCCGCTGAAGTTATCTCCAATCAACAGCAGGATTAGGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: LEEYLEGLPWRRGAL*PLKLSPINSRIRMQ Trigger: CTGCATCCTAATCCTGCTGTTGATTGGAGATAACTTCAGCGGTCACAGGGCACCTCGTCTCCATGGCAACCCCTCTAAATATTCCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543669.5 |
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| CDS CCA 90 bp | TGTGTTCTACTTGTGCTTGTGCCAACCCAGGATTTCTGTCATGGGTaGGGACCCCAGCATTATTATTTTAGGATCCAGTGCCTGAATCCC | + |
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Preference number: 5 (lower is better) Translates to: CVLLVLVPTQDFCHG*GPQHYYFRIQCLNP Trigger: GGGATTCAGGCACTGGATCCTAAAATAATAATGCTGGGGTCCCCACCCATGACAGAAATCCTGGGTTGGCACAAGCACAAGTAGAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477080.1 |
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| CDS GCA 90 bp | TACGCCCAAATGAGAAAGCGCTACATACTGTTCACTTCATTCTGTTaGCACAGGCTGTTCTCGCCAGTGTTCTTTAGTCTCCGAGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: YAQMRKRYILFTSFC*HRLFSPVFFSLRVC Trigger: ACACACTCGGAGACTAAAGAACACTGGCGAGAACAGCCTGTGGCAACAGAATGAAGTGAACAGTATGTAGCGCTTTCTCATTTGGGCGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477080.1 ENST00000477204.5 |
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| CDS GCA 90 bp | GGCTGTTCTCGCCAGTGTTCTTTAGTCTCCGAGTGTGTGCGTGTGTaGGAGCATATATGTGTACGCATATATACGTGTATGTATATGTGT | + |
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Preference number: 5 (lower is better) Translates to: GCSRQCSLVSECVRV*EHICVRIYTCMYMC Trigger: ACACATATACATACACGTATATATGCGTACACATATATGCTCGCACACACGCACACACTCGGAGACTAAAGAACACTGGCGAGAACAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477080.1 ENST00000477204.5 |
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| CDS TCA 90 bp | ACAACTTCCAAGGTGCTTCTCCAAATGTCTGTTTATCATATAACATaGGCACTGGCAGTGGATCTGGCTCCCTCATTATCAAGCCGTATT | + |
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Preference number: 5 (lower is better) Translates to: TTSKVLLQMSVYHIT*ALAVDLAPSLSSRI Trigger: AATACGGCTTGATAATGAGGGAGCCAGATCCACTGCCAGTGCTCATGTTATATGATAAACAGACATTTGGAGAAGCACCTTGGAAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394153.6 |
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| CDS TCA 90 bp | AAGATGTTCTGCATACTTCTCCAAATGTCTGTTTATCATATAACATaGGCACTGGCAGTGGATCTGGCTCCCTCATTATCAAGCCGTATT | + |
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Preference number: 5 (lower is better) Translates to: KMFCILLQMSVYHIT*ALAVDLAPSLSSRI Trigger: AATACGGCTTGATAATGAGGGAGCCAGATCCACTGCCAGTGCTCATGTTATATGATAAACAGACATTTGGAGAAGTATGCAGAACATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543669.5 |
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| CDS TCA 90 bp | CTCTCTCTTTTAACATCTTTAGAATATTTTGCCACAGGAGGGCTCTaGTCCAGCCAGAATGTAGAGCACAAGTCACTAGAGGAATATTTA | + |
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Preference number: 5 (lower is better) Translates to: LSLLTSLEYFATGGL*SSQNVEHKSLEEYL Trigger: TAAATATTCCTCTAGTGACTTGTGCTCTACATTCTGGCTGGATCAGAGCCCTCCTGTGGCAAAATATTCTAAAGATGTTAAAAGAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543669.5 |
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| CDS CCA 72 bp | CCTCAGCGAGGCCGCCGAAGCCGCAGTACCCAGCCCTaGAAGGCCAGGCAGCCGGGACCGCAGGGACCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PQRGRRSRSTQP*KARQPGPQGPA Trigger: GGCTGGTCCCTGCGGTCCCGGCTGCCTGGCCTTCCAGGGCTGGGTACTGCGGCTTCGGCGGCCTCGCTGAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420362.5 ENST00000651089.1 |
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| CDS GCA 72 bp | CGCCGTTTCGGCCTCCGACTTCGGAACCCGGTGGCTTaGAGCGGCGCCGAAAGGCCCACCGACGACCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RRFGLRLRNPVA*SGAERPTDDPS Trigger: GGAGGGGTCGTCGGTGGGCCTTTCGGCGCCGCTGCAAGCCACCGGGTTCCGAAGTCGGAGGCCGAAACGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS CCA 72 bp | GCCCACGCCGTTTCGGCCTCCGACTTCGGAACCCGGTaGCTTGCAGCGGCGCCGAAAGGCCCACCGACGACC | + |
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Preference number: 6 (lower is better) Translates to: AHAVSASDFGTR*LAAAPKGPPTT Trigger: GGTCGTCGGTGGGCCTTTCGGCGCCGCTGCAAGCCACCGGGTTCCGAAGTCGGAGGCCGAAACGGCGTGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS GCA 72 bp | AGCCACGATCGTCACTGTTTTCCAGCTGCGTGGGGATaGTCGCCCGCGCAGCTGTCTCGGCGGCGGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SHDRHCFPAAWG*SPAQLSRRRRP Trigger: CGGCCGCCGCCGCCGAGACAGCTGCGCGGGCGAGCATCCCCACGCAGCTGGAAAACAGTGACGATCGTGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652745.1 |
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| CDS CAA 72 bp | ACGCCGTTTCGGCCTCCGACTTCGGAACCCGGTGGCTaGCAGCGGCGCCGAAAGGCCCACCGACGACCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TPFRPPTSEPGG*QRRRKAHRRPL Trigger: GAGGGGTCGTCGGTGGGCCTTTCGGCGCCGCTGCAAGCCACCGGGTTCCGAAGTCGGAGGCCGAAACGGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS CCA 72 bp | GCAGTGAGCCACGATCGTCACTGTTTTCCAGCTGCGTaGGGATGCTCGCCCGCGCAGCTGTCTCGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AVSHDRHCFPAA*GCSPAQLSRRR Trigger: CCGCCGCCGAGACAGCTGCGCGGGCGAGCATCCCCACGCAGCTGGAAAACAGTGACGATCGTGGCTCACTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652745.1 |
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| CDS GCA 72 bp | GACTGCAGTGAGCCACGATCGTCACTGTTTTCCAGCTaGGTGGGGATGCTCGCCCGCGCAGCTGTCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: DCSEPRSSLFSS*VGMLARAAVSA Trigger: CGCCGAGACAGCTGCGCGGGCGAGCATCCCCACGCAGCTGGAAAACAGTGACGATCGTGGCTCACTGCAGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652745.1 |
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| CDS CAA 72 bp | CAAGTCCTCTCTCCACCCGGATGCCTGCCCCGGAGGTaGGCGCTGGGAAACAGGGTGAGAGGCAAGCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: QVLSPPGCLPRR*ALGNRVRGKRF Trigger: GAAACGCTTGCCTCTCACCCTGTTTCCCAGCGCCAACCTCCGGGGCAGGCATCCGGGTGGAGAGAGGACTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394155.8 ENST00000630677.1 ENST00000651089.1 |
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| CDS CCA 72 bp | GCGCTGGGAAACAGGGTGAGAGGCAAGCGTTTCCCGTaGCACACTGGGGGCTTCCTAGCTTTAGAGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: ALGNRVRGKRFP*HTGGFLALETG Trigger: CCCAGTCTCTAAAGCTAGGAAGCCCCCAGTGTGCCACGGGAAACGCTTGCCTCTCACCCTGTTTCCCAGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000394155.8 ENST00000630677.1 ENST00000651089.1 |
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| CDS TCA 72 bp | GCGCGTGGCGTCTCATTCACTCAGCATTCAGTTTACTaGGCCCTCGCCATGTGCCAAGCTCAGTGCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ARGVSFTQHSVY*ALAMCQAQCRA Trigger: AGCCCGGCACTGAGCTTGGCACATGGCGAGGGCTCAGTAAACTGAATGCTGAGTGAATGAGACGCCACGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS CCA 72 bp | CCCGCGGGGCCAGATGGCCGATGGCTAGTGATTCCCTaGGGAGATGGTAGAAGCCCCTGCTCAGATATATCA | + |
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Preference number: 6 (lower is better) Translates to: PAGPDGRWLVIP*GDGRSPCSDIS Trigger: TGATATATCTGAGCAGGGGCTTCTACCATCTCCCCAGGGAATCACTAGCCATCGGCCATCTGGCCCCGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628568.1 |
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| CDS CCA 72 bp | AAACAGGGTGAGAGGCAAGCGTTTCCCGTGGCACACTaGGGGCTTCCTAGCTTTAGAGACTGGGTGGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: KQGERQAFPVAH*GLPSFRDWVAH Trigger: GTGAGCCACCCAGTCTCTAAAGCTAGGAAGCCCCCAGTGTGCCACGGGAAACGCTTGCCTCTCACCCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394155.8 ENST00000626004.1 ENST00000630677.1 ENST00000651089.1 |
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| CDS TCA 72 bp | AGCTCTTCACAGCAGGGGCACCAGAGTCAGACTGCCTaGGCTCAAATACCGGCTCCGCCTCATATTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSSQQGHQSQTA*AQIPAPPHISC Trigger: ACAGCTAATATGAGGCGGAGCCGGTATTTGAGCTCAGGCAGTCTGACTCTGGTGCCCCTGCTGTGAAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630278.2 |
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| CDS GCA 72 bp | AAGCAGAGGGATTGTTTGCGCCCAGGAGGTCAAGACTaGAGTGAGCCACGATCGTCACTGTTTTCCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KQRDCLRPGGQD*SEPRSSLFSSC Trigger: GCAGCTGGAAAACAGTGACGATCGTGGCTCACTGCAGTCTTGACCTCCTGGGCGCAAACAATCCCTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652745.1 |
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| CDS TCA 72 bp | CCTTGTAGCTGGAGGGACCGCAGCTCTTCCACTAACTaGAAGCCCCAAAGTCTCACTTTGGGTTCCATTCCC | + |
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Preference number: 6 (lower is better) Translates to: PCSWRDRSSSTN*KPQSLTLGSIP Trigger: GGGAATGGAACCCAAAGTGAGACTTTGGGGCTTTCAGTTAGTGGAAGAGCTGCGGTCCCTCCAGCTACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370674.3 |
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| CDS TCA 72 bp | AGGGGTTGCCATGGAGACGAGGTGCCCTGTGACCGCTaGAGTTATCTCCAATCAACAGCAGGATTAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: RGCHGDEVPCDR*SYLQSTAGLGC Trigger: GCATCCTAATCCTGCTGTTGATTGGAGATAACTTCAGCGGTCACAGGGCACCTCGTCTCCATGGCAACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543669.5 |
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| CDS CCA 72 bp | ACGTCACTCAGAAAGCACCGATGGCAAAGCGGCGCGTaGCGTCTCATTCACTCAGCATTCAGTTTACTGAGC | + |
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Preference number: 6 (lower is better) Translates to: TSLRKHRWQSGA*RLIHSAFSLLS Trigger: GCTCAGTAAACTGAATGCTGAGTGAATGAGACGCCACGCGCCGCTTTGCCATCGGTGCTTTCTGAGTGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS CCA 72 bp | ATCCAGAGCGTTTTAACGTCACTCAGAAAGCACCGATaGCAAAGCGGCGCGTGGCGTCTCATTCACTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: IQSVLTSLRKHR*QSGAWRLIHSA Trigger: TGCTGAGTGAATGAGACGCCACGCGCCGCTTTGCCATCGGTGCTTTCTGAGTGACGTTAAAACGCTCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629039.2 |
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| CDS TCA 72 bp | ACCCTGTGTTTGAGAAGCCGCCTGGGCAAAGGCTGTTaGACTCTCACTCAGAACCAAGCCTCCAAACAAAGG | + |
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Preference number: 6 (lower is better) Translates to: TLCLRSRLGKGC*TLTQNQASKQR Trigger: CCTTTGTTTGGAGGCTTGGTTCTGAGTGAGAGTTCAACAGCCTTTGCCCAGGCGGCTTCTCAAACACAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370674.3 |
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| CDS CAA 72 bp | CACCCTGTGTTTGAGAAGCCGCCTGGGCAAAGGCTGTaGAACTCTCACTCAGAACCAAGCCTCCAAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: HPVFEKPPGQRL*NSHSEPSLQTK Trigger: CTTTGTTTGGAGGCTTGGTTCTGAGTGAGAGTTCAACAGCCTTTGCCCAGGCGGCTTCTCAAACACAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370674.3 |
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| CDS TCA 72 bp | TATTTAGAGGGGTTGCCATGGAGACGAGGTGCCCTGTaGCCGCTGAAGTTATCTCCAATCAACAGCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: YLEGLPWRRGAL*PLKLSPINSRI Trigger: AATCCTGCTGTTGATTGGAGATAACTTCAGCGGTCACAGGGCACCTCGTCTCCATGGCAACCCCTCTAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543669.5 |
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| CDS GCA 72 bp | AGAGGAATATTTAGAGGGGTTGCCATGGAGACGAGGTaGCCTGTGACCGCTGAAGTTATCTCCAATCAACAG | + |
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Preference number: 6 (lower is better) Translates to: RGIFRGVAMETR*PVTAEVISNQQ Trigger: CTGTTGATTGGAGATAACTTCAGCGGTCACAGGGCACCTCGTCTCCATGGCAACCCCTCTAAATATTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543669.5 |
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| CDS CCA 72 bp | CTTGTGCTTGTGCCAACCCAGGATTTCTGTCATGGGTaGGGACCCCAGCATTATTATTTTAGGATCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LVLVPTQDFCHG*GPQHYYFRIQC Trigger: GCACTGGATCCTAAAATAATAATGCTGGGGTCCCCACCCATGACAGAAATCCTGGGTTGGCACAAGCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477080.1 |
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| CDS GCA 72 bp | ATGAGAAAGCGCTACATACTGTTCACTTCATTCTGTTaGCACAGGCTGTTCTCGCCAGTGTTCTTTAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: MRKRYILFTSFC*HRLFSPVFFSL Trigger: GAGACTAAAGAACACTGGCGAGAACAGCCTGTGGCAACAGAATGAAGTGAACAGTATGTAGCGCTTTCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477080.1 ENST00000477204.5 |
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| CDS TCA 72 bp | AAGGTGCTTCTCCAAATGTCTGTTTATCATATAACATaGGCACTGGCAGTGGATCTGGCTCCCTCATTATCA | + |
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Preference number: 6 (lower is better) Translates to: KVLLQMSVYHIT*ALAVDLAPSLS Trigger: TGATAATGAGGGAGCCAGATCCACTGCCAGTGCTCATGTTATATGATAAACAGACATTTGGAGAAGCACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394153.6 |
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| CDS TCA 72 bp | GGAAGAAGCATGCTTTCATCACTTACTACGCCCAAATaGGAAAGCGCTACATACTGTTCACTTCATTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GRSMLSSLTTPK*ESATYCSLHSV Trigger: AACAGAATGAAGTGAACAGTATGTAGCGCTTTCTCATTTGGGCGTAGTAAGTGATGAAAGCATGCTTCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477080.1 ENST00000477204.5 |
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| CDS TCA 72 bp | TGCATACTTCTCCAAATGTCTGTTTATCATATAACATaGGCACTGGCAGTGGATCTGGCTCCCTCATTATCA | + |
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Preference number: 6 (lower is better) Translates to: CILLQMSVYHIT*ALAVDLAPSLS Trigger: TGATAATGAGGGAGCCAGATCCACTGCCAGTGCTCATGTTATATGATAAACAGACATTTGGAGAAGTATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543669.5 |
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| CDS GCA 72 bp | ACTTTGTATTTACAACCCTTAGAGTTAAAGGAAAACTaGCAAGATGTTCTGCATACTTCTCCAAATGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TLYLQPLELKEN*QDVLHTSPNVC Trigger: ACAGACATTTGGAGAAGTATGCAGAACATCTTGGCAGTTTTCCTTTAACTCTAAGGGTTGTAAATACAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543669.5 |
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