RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FHDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137460

Ensembl transcript IDs: ENST00000511601.6

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AATCCAGCATTCTACCAGGGGCTGCCACCCATCTGCAGGGAAGCCTaGCCTGCAACCATGAGGCCCTCAAGGCTCATACTCCACTGCTCA +
Preference number: 1 (lower is better)
Translates to: NPAFYQGLPPICREA*PATMRPSRLILHCS
Trigger: TGAGCAGTGGAGTATGAGCCTTGAGGGCCTCATGGTTGCAGGGCAGGCTTCCCTGCAGATGGGTGGCAGCCCCTGGTAGAATGCTGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 90 bp GGTGACTTCCCAAAGTCACCCAGCATCCATGATAGAGGAAGGGCCTaGGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTC +
Preference number: 1 (lower is better)
Translates to: GDFPKSPSIHDRGRA*ELGTQGSSKRSRSL
Trigger: GAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCCCAGGCCCTTCCTCTATCATGGATGCTGGGTGACTTTGGGAAGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 90 bp GGACTGTGCCATCCCAACAGCGTCACTAGCAGTGGCACCAGTGGCTaGTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCATCCTCG +
Preference number: 1 (lower is better)
Translates to: GLCHPNSVTSSGTSG*FICNKDMLPLSPSS
Trigger: CGAGGATGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACTGCTAGTGACGCTGTTGGGATGGCACAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 90 bp CTAGCAGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTaGCTCTTTCCCCATCCTCGTCCCAGAAGTCAGTCTTCACCGTCT +
Preference number: 1 (lower is better)
Translates to: LAVAPVAALSVTKTC*LFPHPRPRSQSSPS
Trigger: AGACGGTGAAGACTGACTTCTGGGACGAGGATGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 90 bp TCACTAGCAGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATaGTGCCTCTTTCCCCATCCTCGTCCCAGAAGTCAGTCTTCACCG +
Preference number: 1 (lower is better)
Translates to: SLAVAPVAALSVTKT*CLFPHPRPRSQSSP
Trigger: CGGTGAAGACTGACTTCTGGGACGAGGATGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACTGCTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR TCA 90 bp CTCACAATGCGCGCCCTGAATACATGGAAGCATCTGATTTCTGTCTaGGTCCAACTTTCCCTCCTGTTCCTAGACAGACTCACACCCAGA +
Preference number: 1 (lower is better)
Translates to: LTMRALNTWKHLISV*VQLSLLFLDRLTPR
Trigger: TCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTCCATGTATTCAGGGCGCGCATTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 90 bp TGGGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTaGTATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTT +
Preference number: 1 (lower is better)
Translates to: WELGTQGSSKRSRSL*YPQIHKLRITCIHF
Trigger: AAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 90 bp AGAAAAGAAGGAAGTGCTGGGAGCACACAAAGAGAGAAGAAAGGCTaGGAGACAGAATGGTTTGCACCTCCCTGTAACCAGAGTGAACAC +
Preference number: 1 (lower is better)
Translates to: RKEGSAGSTQREKKG*ETEWFAPPCNQSEH
Trigger: GTGTTCACTCTGGTTACAGGGAGGTGCAAACCATTCTGTCTCCCAGCCTTTCTTCTCTCTTTGTGTGCTCCCAGCACTTCCTTCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR TCA 90 bp AACTCAGCTGACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATaGCAGGCAACAGTCTGCAGAAGGGAGGTTCTAACGTCAACCACG +
Preference number: 1 (lower is better)
Translates to: NSADLWKLSISNSLR*QATVCRREVLTSTT
Trigger: CGTGGTTGACGTTAGAACCTCCCTTCTGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGTCAGCTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 90 bp GCAGCCTTCACTCAGTTTTATAACAGACACACGAATGGAGGAACATaGGATTGGAAAGACGCACACTGTCAAACAGCCCTGATGCCTTTC +
Preference number: 1 (lower is better)
Translates to: AAFTQFYNRHTNGGT*DWKDAHCQTALMPF
Trigger: GAAAGGCATCAGGGCTGTTTGACAGTGTGCGTCTTTCCAATCCCATGTTCCTCCATTCGTGTGTCTGTTATAAAACTGAGTGAAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 90 bp TCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCACTTaGATCCATTTTCCACCACCATGGACCTTATGCTTTGAACTGTTT +
Preference number: 1 (lower is better)
Translates to: SRSLCYPQIHKLRIT*IHFPPPWTLCFELF
Trigger: AAACAGTTCAAAGCATAAGGTCCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 90 bp TTACTACCGATAAAAGGTAATACAATGATCATCTGCTCACACAGATaGATAGAGAAGTTGTCCACAGGGCTAAGTAAAGCACCACTTCCC +
Preference number: 1 (lower is better)
Translates to: LLPIKGNTMIICSHR*IEKLSTGLSKAPLP
Trigger: GGGAAGTGGTGCTTTACTTAGCCCTGTGGACAACTTCTCTATGCATCTGTGTGAGCAGATGATCATTGTATTACCTTTTATCGGTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAGGAGGGTGGGGTGCATaGGGGAGGTGCGGCCGTCAC +
Preference number: 2 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTGGWGA*GRCGRH
Trigger: GTGACGGCCGCACCTCCCCCATGCACCCCACCCTCC...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR TCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAGCTCTGAGGGAGGCTaGGGTGGGAGGATCACTTGG +
Preference number: 2 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTSSEGG*GGRITW
Trigger: CCAAGTGATCCTCCCACCTCAGCCTCCCTCAGAGCT...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CAA 90 bp TCCCAAAGTCACCCAGCATCCATGATAGAGGAAGGGCCTGGGAGCTaGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATC +
Preference number: 2 (lower is better)
Translates to: SQSHPASMIEEGPGS*VPRVPPRGPDPSAI
Trigger: GATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCCCAGGCCCTTCCTCTATCATGGATGCTGGGTGACTTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGCATCCATCTGGACGCTaGACTGCAGCAGGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMHPSGR*TAAGLS
Trigger: GCTGAGCCCTGCTGCAGTCCAGCGTCCAGATGGATG...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR TCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTTCAGTCTTCACCGTCTaGATCCCAGGAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: AYGEVQLPATDPVWAGETSVFTV*IPGGRR
Trigger: TCTCCTGCCTCCTGGGATTCAGACGGTGAAGACTGA...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR GCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCATGGGGAAGTCCAGTTaGCAGCAACGGACCCTGTGT +
Preference number: 2 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGMGKSS*QQRTLC
Trigger: ACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCAT...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGCAGGCTGGAGTGCAGTaGTGGGGTCCTGGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKQAGVQ*WGPGLK
Trigger: CTTGAGCCCAGGACCCCACCACTGCACTCCAGCCTG...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCGCAACGGACCCTGTGTaGGCAGGTGAAACTCTGAAG +
Preference number: 2 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGATDPV*AGETLK
Trigger: CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGC...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR GCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCGTAACAAAGACATGCTaGCTCTTTCCCCATCCTCGT +
Preference number: 2 (lower is better)
Translates to: LECSGGVLGSSDLPISAFVTKTC*LFPHPR
Trigger: ACGAGGATGGGGAAAGAGGCAGCATGTCTTTGTTAC...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR GCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGCAGGGAAGCCTGCCCTaGAACCATGAGGCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKQGSLP*NHEALK
Trigger: CTTGAGGGCCTCATGGTTGCAGGGCAGGCTTCCCTG...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACATCATGCACGGAGAAGTaGGCAAGCCAGACAATCTTC +
Preference number: 2 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTSCTEK*ASQTIF
Trigger: GAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGA...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR GCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCACTCAGCACAGCAGGCTaGAGTCCACAGGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESLSTAG*SPQASW
Trigger: CCAGGAGGCCTGTGGACTGCAGCCTGCTGTGCTGAG...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTTCGGGATCCGGGCTTTaGGGGAGGGTGGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTSGSGL*GRVGCM
Trigger: CATGCACCCCACCCTCCCCCAAAGCCCGGATCCCGA...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAATACTGAGGATATACTaGCCAAGTGTGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTILRIY*PSVVAH
Trigger: GTGAGCCACCACACTTGGCCAGTATATCCTCAGTAT...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAACTTTGTGGAGCCCTaGAAATACCTACTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTNFVEP*KYLLRA
Trigger: AGCCCTGAGTAGGTATTTCCAGGGCTCCACAAAGTT...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CAA 90 bp CATCATCGAGGCCATGGCCCCACATCTGTGATATGGGAAACAGGCTaGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGAT +
Preference number: 2 (lower is better)
Translates to: HHRGHGPTSVIWETG*GRGGDFPKSPSIHD
Trigger: ATCATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGGGCCATGGCCTCGATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR GCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCAATCTGCAGGGAAGCCTaGCCTGCAACCATGAGGCCC +
Preference number: 2 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESICREA*PATMRP
Trigger: GGGCCTCATGGTTGCAGGGCAGGCTTCCCTGCAGAT...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR TCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACACCTTTAAAACTCAGCTaGCTTATGGAAGCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTPLKLS*LMEAQH
Trigger: ATGCTGAGCTTCCATAAGTCAGCTGAGTTTTAAAGG...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCAGAACGTGCATCCATCTaGACGCTGGACTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESERASI*TLDCSR
Trigger: CCTGCTGCAGTCCAGCGTCCAGATGGATGCACGTTC...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CAA 90 bp CTGGGAGCACACAAAGAGAGAAGAAAGGCTGGGAGACAGAATGGTTaGCACCTCCCTGTAACCAGAGTGAACACAGGTCATAGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: LGAHKERRKAGRQNG*HLPVTRVNTGHSSL
Trigger: AAGGCTGCTATGACCTGTGTTCACTCTGGTTACAGGGAGGTGCAAACCATTCTGTCTCCCAGCCTTTCTTCTCTCTTTGTGTGCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR GCA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGAGTGGCACCAGTGGCTaGTTTATCTGTAACAAAGAC +
Preference number: 2 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMSGTSG*FICNKD
Trigger: GTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR GCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAGGTGCATGGGGGAGGTaGGGCCGTCACAGTAGTGAA +
Preference number: 2 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSAGAWGR*GRHSSE
Trigger: TTCACTACTGTGACGGCCGCACCTCCCCCATGCACC...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR TCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAAGGTCAAAGCTGCAGTaGGCTATGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSARSKLQ*AMIVPL
Trigger: CAGTGGCACAATCATAGCTCACTGCAGCTTTGACCT...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR GCA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGAGGCCTCCTGGACTGTaGCATCCCAACAGCGTCACT +
Preference number: 2 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQRPPGL*HPNSVT
Trigger: AGTGACGCTGTTGGGATGGCACAGTCCAGGAGGCCT...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR TCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATACTTTTGAATAAAGCCTaGTTCCCCCACTCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: RAVFTRGFVVRCFTISAILLNKA*FPHSAP
Trigger: GGGGGCAGAGTGGGGGAATCAGGCTTTATTCAAAAG...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGGATACCCAAGGCTTATaGGGAAGTCCAGTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQDTQGL*GSPVAS
Trigger: GCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATC...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAAGAGGAGTCGTGAAATaGGCATTGGGTAGAAAAAGT +
Preference number: 2 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSARGVVK*ALGRKS
Trigger: ACTTTTTCTACCCAATGCCCATTTCACGACTCCTCT...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR TCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTAAAATATCTTCATACTaGGGATATACTGGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTKISSY*GYTGQV
Trigger: CACTTGGCCAGTATATCCTCAGTATGAAGATATTTT...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR TCA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGATACATGGAAGCATCTaGTTTCTGTCTGAGTCCAAC +
Preference number: 2 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQIHGSI*FLSESN
Trigger: GTTGGACTCAGACAGAAATCAGATGCTTCCATGTAT...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR TCA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGTTCAACTGTTTCTTTTaGATAAAGCCTGATTCCCCC +
Preference number: 2 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWFNCFF*IKPDSP
Trigger: GGGGGAATCAGGCTTTATTCAAAAGAAACAGTTGAA...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR TCA 72 bp CAGGCTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTaGCCTTCCCATCTCAGCGTTCAGAGTGGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: QAGVQWWGPGLK*PSHLSVQSGWG
Trigger: GCCCCAGCCACTCTGAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 72 bp TTCTACCAGGGGCTGCCACCCATCTGCAGGGAAGCCTaGCCTGCAACCATGAGGCCCTCAAGGCTCATACTC +
Preference number: 3 (lower is better)
Translates to: FYQGLPPICREA*PATMRPSRLIL
Trigger: GAGTATGAGCCTTGAGGGCCTCATGGTTGCAGGGCAGGCTTCCCTGCAGATGGGTGGCAGCCCCTGGTAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CAA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGCGGGGTTTCTCCATGTaGCCTAGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: GEVQLPATDPVWAGETLKRGFSM*PRLVSN
Trigger: GTTCGAGACCAGCCTAGGCAACATGGAGAAACCCCG...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 72 bp GGGAGACACAGCCCATCACAGGATACCCAAGGCTTATaGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTG +
Preference number: 3 (lower is better)
Translates to: GRHSPSQDTQGL*GSPVASNGPCV
Trigger: CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 72 bp CCAAAGTCACCCAGCATCCATGATAGAGGAAGGGCCTaGGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCC +
Preference number: 3 (lower is better)
Translates to: PKSPSIHDRGRA*ELGTQGSSKRS
Trigger: GGACCTCTTGGAGGAACCCTGGGTACCAAGCTCCCAGGCCCTTCCTCTATCATGGATGCTGGGTGACTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 72 bp ATCACAGGATACCCAAGGCTTATGGGGAAGTCCAGTTaGCAGCAACGGACCCTGTGTGGGCAGGTGAAACTC +
Preference number: 3 (lower is better)
Translates to: ITGYPRLMGKSS*QQRTLCGQVKL
Trigger: GAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 72 bp TATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTaGGCAGGTGAAACTCTGAAGCCAGAGAACACAGGA +
Preference number: 3 (lower is better)
Translates to: YGEVQLPATDPV*AGETLKPENTG
Trigger: TCCTGTGTTCTCTGGCTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 72 bp GACCATCATCGAGGCCATGGCCCCACATCTGTGATATaGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCA +
Preference number: 3 (lower is better)
Translates to: DHHRGHGPTSVI*ETGLGRGGDFP
Trigger: TGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGGGCCATGGCCTCGATGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 72 bp AGGTGGAAAGACCTGTGGAGACCATCATCGAGGCCATaGCCCCACATCTGTGATATGGGAAACAGGCTTGGG +
Preference number: 3 (lower is better)
Translates to: RWKDLWRPSSRP*PHICDMGNRLG
Trigger: CCCAAGCCTGTTTCCCATATCACAGATGTGGGGCCATGGCCTCGATGATGGTCTCCACAGGTCTTTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 72 bp GTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATaGTGCCTCTTTCCCCATCCTCGTCCCAGAAGTCAG +
Preference number: 3 (lower is better)
Translates to: VAPVAALSVTKT*CLFPHPRPRSQ
Trigger: CTGACTTCTGGGACGAGGATGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 72 bp GGAAGTGCTGGGAGCACACAAAGAGAGAAGAAAGGCTaGGAGACAGAATGGTTTGCACCTCCCTGTAACCAG +
Preference number: 3 (lower is better)
Translates to: GSAGSTQREKKG*ETEWFAPPCNQ
Trigger: CTGGTTACAGGGAGGTGCAAACCATTCTGTCTCCCAGCCTTTCTTCTCTCTTTGTGTGCTCCCAGCACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CAA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGGTCGTGAAATGGGCATaGGGTAGAAAAAGTCCCATG +
Preference number: 3 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMVVKWA*GRKSPM
Trigger: CATGGGACTTTTTCTACCCAATGCCCATTTCACGAC...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CAA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACACATGGACCTTATGCTTaGAACTGTTTTGTCTACCTG +
Preference number: 3 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTHGPYA*NCFVYL
Trigger: CAGGTAGACAAAACAGTTCAAAGCATAAGGTCCATG...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 72 bp GCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTaGCTCTTTCCCCATCCTCGTCCCAGAAGTCAGTCT +
Preference number: 3 (lower is better)
Translates to: APVAALSVTKTC*LFPHPRPRSQS
Trigger: AGACTGACTTCTGGGACGAGGATGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 72 bp CATCCCAACAGCGTCACTAGCAGTGGCACCAGTGGCTaGTTTATCTGTAACAAAGACATGCTGCCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: HPNSVTSSGTSG*FICNKDMLPLS
Trigger: GGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACTGCTAGTGACGCTGTTGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR GCA 72 bp GGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTaGTATCCACAAATCCACAAACTTAGAATCACTTGC +
Preference number: 3 (lower is better)
Translates to: GTQGSSKRSRSL*YPQIHKLRITC
Trigger: GCAAGTGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR-3UTR CAA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATAGGGAGACAGAATGGTTaGCACCTCCCTGTAACCAGA +
Preference number: 3 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIGRQNG*HLPVTR
Trigger: TCTGGTTACAGGGAGGTGCAAACCATTCTGTCTCCC...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 72 bp TTTTATAACAGACACACGAATGGAGGAACATGGGATTaGAAAGACGCACACTGTCAAACAGCCCTGATGCCT +
Preference number: 3 (lower is better)
Translates to: FYNRHTNGGTWD*KDAHCQTALMP
Trigger: AGGCATCAGGGCTGTTTGACAGTGTGCGTCTTTCCAATCCCATGTTCCTCCATTCGTGTGTCTGTTATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CCA 72 bp ACTCAGTTTTATAACAGACACACGAATGGAGGAACATaGGATTGGAAAGACGCACACTGTCAAACAGCCCTG +
Preference number: 3 (lower is better)
Translates to: TQFYNRHTNGGT*DWKDAHCQTAL
Trigger: CAGGGCTGTTTGACAGTGTGCGTCTTTCCAATCCCATGTTCCTCCATTCGTGTGTCTGTTATAAAACTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR TCA 72 bp AATTTCCCCGTTTCCCAATTAGTCTCAGAGGAGTCGTaGAATGGGCATTGGGTAGAAAAAGTCCCATGTTTT +
Preference number: 3 (lower is better)
Translates to: NFPVSQLVSEES*NGHWVEKVPCF
Trigger: AAAACATGGGACTTTTTCTACCCAATGCCCATTTCACGACTCCTCTGAGACTAATTGGGAAACGGGGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCTCCCCGGACGGGTGCTaGTGGAGCCGCTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGSPDGC*WSRCSP
Trigger: GGGGGAGCAGCGGCTCCAGCAGCACCCGTCCGGGGA...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCGGAGGGCCCCCGGGATaGCAGCTCTGGTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGGGPPG*QLWSPP
Trigger: TGGAGGCGACCAGAGCTGTCATCCCGGGGGCCCTCC...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCGGGCTGCCACCCATCTaGAGGGAAGCCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFGLPPI*REACPA
Trigger: TGCAGGGCAGGCTTCCCTGCAGATGGGTGGCAGCCC...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAGCCATCCTCCAGCGCTaGGCTGAGACTCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTAILQR*AETPQG
Trigger: GCCCTGGGGAGTCTCAGCCCAGCGCTGGAGGATGGC...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGAGGGTGGGGTGCATaGGGGAGGTGCGGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVGGWGA*GRCGRH
Trigger: GTGACGGCCGCACCTCCCCCATGCACCCCACCCTCC...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCCCCTGGAGGTTGAACTaGGCCAGCCCTGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFPWRLN*ASPVTS
Trigger: GCTGGTGACAGGGCTGGCCCAGTTCAACCTCCAGGG...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGCCGGGTCCCCGCCTCTaGGTCTGGAGTCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVPGPRL*VWSRFP
Trigger: AGGGAACCGACTCCAGACCCAGAGGCGGGGACCCGG...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACATCGGGATCCGGGCTTTaGGGGAGGGTGGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTSGSGL*GRVGCM
Trigger: CATGCACCCCACCCTCCCCCAAAGCCCGGATCCCGA...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCGCGACACTGTCCGAGTaGTGCCGGGGGCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGATLSE*CRGLWP
Trigger: TGGCCAAAGCCCCCGGCATCACTCGGACAGTGTCGC...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTGCTGCTCCGGCCAAATaGCCCCAGCTCCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETAAPAK*PQLPSC
Trigger: GCAACTGGGGAGCTGGGGGCATTTGGCCGGAGCAGC...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGCCCTCCCCGGACGGGTaGTGCTGGAGCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMPSPDG*CWSRCS
Trigger: GGAGCAGCGGCTCCAGCAGCACCCGTCCGGGGAGGG...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGACTCTGGGCGCTTCTTaGGGGCCCGGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMTLGAS*GPGHCW
Trigger: CCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGT...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CAA 72 bp CACCCAGCATCCATGATAGAGGAAGGGCCTGGGAGCTaGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCC +
Preference number: 4 (lower is better)
Translates to: HPASMIEEGPGS*VPRVPPRGPDP
Trigger: GGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCCCAGGCCCTTCCTCTATCATGGATGCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGTGCTGCTGCTGGCACTaGGGGACTGCGGGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMCCCWH*GTAGPY
Trigger: ATAGGGGCCCGCAGTCCCTCAGTGCCAGCAGCAGCA...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGCAGTCCAGGGTCAGTaGGCAGTCGGTGGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVAVQGQ*AVGGVR
Trigger: TCGGACACCACCGACTGCTCACTGACCCTGGACTGC...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCGGGAGGTCTCCTCCATaGCCTGGGAACCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGGRSPP*PGNPGG
Trigger: ACCTCCAGGGTTCCCAGGGCATGGAGGAGACCTCCC...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCGACTGCGGGCCCCTATaGCCCACAGACTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGDCGPL*PTDSSS
Trigger: GGAGCTAGAGTCTGTGGGGCATAGGGGCCCGCAGTC...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGCCCCGCGGCAGCCTCTaGTCTTCGGCGCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKPRGSL*SSAPVE
Trigger: CTCCACAGGCGCCGAAGAGCAGAGGCTGCCGCGGGG...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACACAGGGAAGCCTGCCCTaGAACCATGAGGCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTQGSLP*NHEALK
Trigger: CTTGAGGGCCTCATGGTTGCAGGGCAGGCTTCCCTG...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGATCTGCAGGGAAGCCTaGCCTGCAACCATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKICREA*PATMRP
Trigger: GGGCCTCATGGTTGCAGGGCAGGCTTCCCTGCAGAT...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCGCAAAGCTGGAGTCCTaGTGCCTCACTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFAKLES*CLTSAG
Trigger: GCCTGCAGAAGTGAGGCACCAGGACTCCAGCTTTGC...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCGCATGGTTCTCAGGCTaGGCGGCTGCAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGAWFSG*AAASWC
Trigger: GCACCAGCTTGCAGCCGCCCAGCCTGAGAACCATGC...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTACACGGGGTAGTTCGTaGGGGACGCTGGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETTRGSS*GTLGTD
Trigger: GTCAGTGCCCAGCGTCCCCCACGAACTACCCCGTGT...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGAAGTGCTGCTGTCCTTaGGAGCGGCATCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKKCCCP*ERHPRG
Trigger: ACCCCGAGGATGCCGCTCCCAAGGACAGCAGCACTT...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCACCAGCGTGGTCCGACTaGAGTCCTTCCGACGGAGGG +
Preference number: 4 (lower is better)
Translates to: SHARRSGQARQSSGRHSPPAWSD*SPSDGG
Trigger: CCCTCCGTCGGAAGGACTCCAGTCGGACCACGCTGG...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCCCTGCCCTGCAACCATaGGGCCCTCAAGGCTCATAC +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGPALQP*GPQGSY
Trigger: GTATGAGCCTTGAGGGCCTCATGGTTGCAGGGCAGG...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCGGCCTGAGGTTTGTGTaGAAAGCTGGAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFGLRFV*KAGVLV
Trigger: CACCAGGACTCCAGCTTTGCACACAAACCTCAGGCC...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGTGGGCAGGCCGCCCTTaGAGCTGGGCTCACTATCCA +
Preference number: 4 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMWAGRP*SWAHYP
Trigger: TGGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCA...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCATGCTGCTGGAGCCGCTaGTCCCCCGCGGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPCCWSR*SPAAAS
Trigger: AGAGGCTGCCGCGGGGGAGCAGCGGCTCCAGCAGCA...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTGGTGCATGGGGGAGGTaGGGCCGTCACAGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETGAWGR*GRHSSE
Trigger: TTCACTACTGTGACGGCCGCACCTCCCCCATGCACC...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAGTCTCCTCCATGCCCTaGGAACCCTGGAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTVSSMP*EPWRLN
Trigger: GTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGAC...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGGAGGGGCCTCCGTGTTaGCACTGGGACCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMEGPPC*HWDPPQ
Trigger: CTGCGGAGGGTCCCAGTGCCAACACGGAGGCCCCTC...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGAAGGGCCTGGGAGCTTaGTACCCAGGGTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKKGLGA*YPGFLQ
Trigger: TTGGAGGAACCCTGGGTACCAAGCTCCCAGGCCCTT...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCTTTCGGAGGACACTaGCGCCCTGGCGCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKSFGGH*RPGAEL
Trigger: GAGCTCGGCGCCAGGGCGTCAGTGTCCTCCGAAAGA...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCTGGGTCCTTGCTGATTaGCCTGACTTGGACTCACAG +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFWVLAD*PDLDSQ
Trigger: CTGTGAGTCCAAGTCAGGTCAATCAGCAAGGACCCA...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCACATCGGGGGCAGCCTTaGCATCCTCCAGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPHRGQP*HPPALG
Trigger: GCCCAGCGCTGGAGGATGGCAAGGCTGCCCCCGATG...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATTGGGGGCCCGGGCACTaGTGGCTCGCCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYWGPGH*WLASKC
Trigger: GCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCA...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCAGGTGGAGGAGGTGCTaGAGGAGGTGTCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGRWRRC*RRCLPN
Trigger: ATTGGGCAGACACCTCCTCCAGCACCTCCTCCACCT...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAGGGTTGGAGGAGACTTaGCTGTCCCCCATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTGLEET*LSPISP
Trigger: TGGAGAAATGGGGGACAGCCAAGTCTCCTCCAACCC...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGTGGTGGGTTTGTCCCTaGGCAGGCCGCCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMWWVCP*AGRPCS
Trigger: GCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCA...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCATCAGGGCCCTCGGAGTaGGCGCGGCAGGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: SHARRSGQARQSSGRHSPSGPSE*ARQVLF
Trigger: AAATAAGACCTGCCGCGCCCACTCCGAGGGCCCTGA...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCTCTTGGGCTCTTCTTTaGGACTCTCAGGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGSWALL*DSQGPR
Trigger: CCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAAGA...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATACCCTCCGCAGACTCTaGGCGCTTCTTGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYTLRRL*ALLGGP
Trigger: CGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGT...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGGGATTCTCCCCAGCGTaGTCCGACTGGAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMGFSPA*SDWSPS
Trigger: GGAAGGACTCCAGTCGGACCACGCTGGGGAGAATCC...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTGAACGTGCATCCATCTaGACGCTGGACTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETERASI*TLDCSR
Trigger: CCTGCTGCAGTCCAGCGTCCAGATGGATGCACGTTC...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTGATAGAGGAAGGGCCTaGGAGCTTGGTACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETDRGRA*ELGTQG
Trigger: ACCCTGGGTACCAAGCTCCCAGGCCCTTCCTCTATC...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAGTGTCTGCCCAATCATaGATCCAGGTGCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTVSAQS*IQVLWQ
Trigger: TTGCCACAGCACCTGGATTCATGATTGGGCAGACAC...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGACCCTCCTGCATTCATaGTATTCCCAGCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKTLLHS*YSQPGA
Trigger: TGCTCCAGGCTGGGAATATCATGAATGCAGGAGGGT...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGCATGCTCTCGTTCTCTaGGGCGGTCAGGGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKHALVL*GGQGPH
Trigger: GTGCGGACCCTGACCGCCTCAGAGAACGAGAGCATG...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCACGGAGTTCTGGCGTaGCCACACAGTATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETHGVLA*PHSICA
Trigger: AGCACAGATACTGTGTGGTCACGCCAGAACTCCGTG...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGTTGGTGGTGTCTTCCTaGTGCCCAAAGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKLVVSS*CPKSSS
Trigger: TGAGGAGCTCTTTGGGCAGCAGGAAGACACCACCAA...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCCATCATTCTCACTGCTaGTCCGGCCAAATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGHHSHC*SGQMPP
Trigger: TGGGGGCATTTGGCCGGAGCAGCAGTGAGAATGATG...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGATGGGGAAGTCCAGTTaGCAGCAACGGACCCTGTGT +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVMGKSS*QQRTLC
Trigger: ACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCAT...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCAAGGACACTGACGCCCTaGCGCCGAGCTCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPRTLTP*RRALGK
Trigger: CTTCCCCAGAGCTCGGCGCCAGGGCGTCAGTGTCCT...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATCCCCGCCTCTGGGTCTaGAGTCGGTTCCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYPRLWV*SRFPLS
Trigger: GCTCAGAGGGAACCGACTCCAGACCCAGAGGCGGGG...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGCATCTTTCCTTTTGGTaGGTTTGTCCCTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKHLSFW*VCPWAG
Trigger: GCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATG...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGCTCCGCACGGAGTTCTaGCGTGACCACACAGTATCT +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVLRTEF*RDHTVS
Trigger: AGATACTGTGTGGTCACGCCAGAACTCCGTGCGGAG...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCAGCTCTTCGGCGCCTGTaGAGGCCCTCCGCACGGAGT +
Preference number: 4 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESALRRL*RPSARS
Trigger: ACTCCGTGCGGAGGGCCTCCACAGGCGCCGAAGAGC...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCTCATGCACGGAGAAGTaGGCAAGCCAGACAATCTTC +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFSCTEK*ASQTIF
Trigger: GAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGA...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CAA 72 bp GGCCATGGCCCCACATCTGTGATATGGGAAACAGGCTaGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: GHGPTSVIWETG*GRGGDFPKSPS
Trigger: GCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGGGCCATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCAACTTCCGTAAGGGATTaGGGATTCTCCCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: SHARRSGQARQSSGRHSPTSVRD*GFSPAW
Trigger: CCACGCTGGGGAGAATCCTCAATCCCTTACGGAAGT...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAGGTCAAAGCTGCAGTaGGCTATGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTRSKLQ*AMIVPL
Trigger: CAGTGGCACAATCATAGCTCACTGCAGCTTTGACCT...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGAGCTCTGAGGGAGGCTaGGGTGGGAGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKSSEGG*GGRITW
Trigger: CCAAGTGATCCTCCCACCTCAGCCTCCCTCAGAGCT...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGAGCAACAACTCATGCTaGAGGTGCTCTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKSNNSC*RCSLLS
Trigger: GCTCAGAAGAGAGCACCTTCAGCATGAGTTGTTGCT...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCAAGCTGCCTCAGCTCCTaGGCCTCCCGGTCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESSCLSS*ASRSWL
Trigger: CAACCACGACCGGGAGGCGCAGGAGCTGAGGCAGCT...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTTGTTCTCAGGGTCGCTaGTACCCACAGATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETCSQGR*YPQIPK
Trigger: CTTTGGGATCTGTGGGTAGCAGCGACCCTGAGAACA...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGCCTTTCACCCTCAGCTaGCGCTGCGACACTGTCCGA +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMPFTLS*RCDTVR
Trigger: TCGGACAGTGTCGCAGCGGCAGCTGAGGGTGAAAGG...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGGGCTGTGGAACTTATTaGGCTCCTCAGGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKGCGTY*APQGCR
Trigger: CCGGCAGCCCTGAGGAGCCCAATAAGTTCCACAGCC...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGGGCCGCCCTTGCAGCTaGGCTCACTATCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMGRPCS*AHYPQR
Trigger: TCTCTGTGGATAGTGAGCCCAGCTGCAAGGGCGGCC...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTGGGTCCGCACAGACTTaGCCACTGCCCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTGSAQT*PLPPGS
Trigger: GGAGCCAGGGGGCAGTGGCCAAGTCTGTGCGGACCC...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCACCTCCGTGTTGGCACTaGGACCCTCCGCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPPPCWH*DPPQTL
Trigger: CAGAGTCTGCGGAGGGTCCCAGTGCCAACACGGAGG...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCCGCGCCCTGAATACATaGAAGCATCTGATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFRALNT*KHLISV
Trigger: GACAGAAATCAGATGCTTCCATGTATTCAGGGCGCG...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCGGAGGAACATGGGATTaGAAAGACGCACACTGTCAA +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFGGTWD*KDAHCQ
Trigger: TTGACAGTGTGCGTCTTTCCAATCCCATGTTCCTCC...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGCCATCATCGAGGCCATaGCCCCACATCTGTGATATG +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVPSSRP*PHICDM
Trigger: CATATCACAGATGTGGGGCCATGGCCTCGATGATGG...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAAGGAGGGGACTGTGCTaGGCCCAGGCTCACCGGCTC +
Preference number: 4 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSARRGLC*AQAHRL
Trigger: GAGCCGGTGAGCCTGGGCTCAGCACAGTCCCCTCCT...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCACTTTTGAATAAAGCCTaGTTCCCCCACTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SHARRSGQARQSSGRHSPLLNKA*FPHSAP
Trigger: GGGGGCAGAGTGGGGGAATCAGGCTTTATTCAAAAG...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTGGCTTCTTGAGATGGTaGAAAGCAGCTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETGFLRW*KAAQDS
Trigger: GGAATCCTGAGCTGCTTTTCACCATCTCAAGAAGCC...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTTCTGAGCAGCCCTTaGGGTGAGGCTTTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETLLSSP*GEAFAL
Trigger: TAAAGCAAAAGCCTCACCTCAAGGGCTGCTCAGAAG...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGAAGATCTGTTCTCATaGTTCGAGAGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVEDLFS*FERRRP
Trigger: TGGCCTCCTCCTCTCGAAGCATGAGAACAGATCTTC...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCACCTCAGGGCTGCCGGTaGAGCTCTCCAAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPPQGCR*SSPRRS
Trigger: TGACCTTCTTGGAGAGCTCCACCGGCAGCCCTGAGG...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCATCAGTGAGCAGTCGGTaGTGTCCGAGATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SHARRSGQARQSSGRHSPSVSSR*CPRCRT
Trigger: TGTTCTGCATCTCGGACACCACCGACTGCTCACTGA...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTGTTCGTGGGGGACGCTaGGCACTGACGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTVRGGR*ALTGSW
Trigger: CCAAGACCCCGTCAGTGCCCAGCGTCCCCCACGAAC...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCACAGGCTGGAGTGCAGTaGTGGGGTCCTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESQAGVQ*WGPGLK
Trigger: CTTGAGCCCAGGACCCCACCACTGCACTCCAGCCTG...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGACGAATGGAGGAACATaGGATTGGAAAGACGCACAC +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKTNGGT*DWKDAH
Trigger: GTGTGCGTCTTTCCAATCCCATGTTCCTCCATTCGT...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGGGCTGGGAGACAGAATaGTTTGCACCTCCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMGWETE*FAPPCN
Trigger: GTTACAGGGAGGTGCAAACCATTCTGTCTCCCAGCC...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTAACGTCAACCACGTaGATTCCCCACAAACGCATC +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETLTSTT*IPHKRI
Trigger: GATGCGTTTGTGGGGAATCCACGTGGTTGACGTTAG...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCTATGGGAAACAGGCTTaGGAAGAGGTGGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGYGKQA*EEVVTS
Trigger: GGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATA...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGCTTGGGAAGAGGTGGTaGCTTCCCAAAGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKLGKRW*LPKVTQ
Trigger: CTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAG...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCAGAAGGTGCTCTCTTCTaGGCAGCCCTTGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPEGALF*AALEVR
Trigger: CCTCACCTCAAGGGCTGCTCAGAAGAGAGCACCTTC...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGCGGCGCGCAGACCGCTaGAGCCTCCCGCCGTTGTGT +
Preference number: 4 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWRRADR*SLPPLC
Trigger: ACACAACGGCGGGAGGCTGCAGCGGTCTGCGCGCCG...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTTCCCCAGGGCATCTCTaGCCATGGGTGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTSPGHL*PWVSGC
Trigger: GCAGCCTGACACCCATGGGCAGAGATGCCCTGGGGA...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCGGAGCCTCTCTTTGGTaGTACAACATCTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFGASLW*YNIFPF
Trigger: AAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCC...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATACACAGACTTGGCCACTaGCCCCTGGCTCCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIHRLGH*PLAPPG
Trigger: GCCCGGCGGAGCCAGGGGGCAGTGGCCAAGTCTGTG...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCGTAACAAAGACATGCTaGCTCTTTCCCCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGVTKTC*LFPHPR
Trigger: ACGAGGATGGGGAAAGAGGCAGCATGTCTTTGTTAC...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACACCCAGAGTCATaGACGGAGAAGTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKSHPES*TEKWAS
Trigger: GCTTGCCCACTTCTCCGTGCATGACTCTGGGTGTGA...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCACTCCGGGGCAGGCTGTaGAACTTATTGGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPLRGRL*NLLGSS
Trigger: TGAGGAGCCCAATAAGTTCCACAGCCTGCCCCGGAG...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGGGGGAGGTTCCTGAGTaGTTTGGCACTGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKGEVPE*FGTGLL
Trigger: AAGAAGCCCAGTGCCAAACCACTCAGGAACCTCCCC...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGATACTGAGGATATACTaGCCAAGTGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVILRIY*PSVVAH
Trigger: GTGAGCCACCACACTTGGCCAGTATATCCTCAGTAT...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp TCCCTCCTGTTCCTAGACAGACTCACACCCAGAGTCATGCACGGAGAAGTGGGCCTGATTGACCTGACTTaGACTCACAGAGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLLFLDRLTPRVMHGEVGLIDLT*THRGGK
Trigger: CTTTCCACCTCTGTGAGTCCAAGTCAGGTCAATCAG...GCCCACTTCTCCGTGCATGACTCTGGGTGTGAGTCTGTCTAGGAACAGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGGGGGACGCTGGGCACTaGCGGGGTCTTGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWGDAGH*RGLGLF
Trigger: GAAGAGCCCAAGACCCCGTCAGTGCCCAGCGTCCCC...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCAATCATGAATCCAGGTaGTGTGGCAATATTCCCATT +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFNHESR*CGNIPI
Trigger: AATGGGAATATTGCCACAGCACCTGGATTCATGATT...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGATGTTCCTGCCTGGCTaGCAAGGTCCAGATGTTGGT +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMMFLPG*QGPDVG
Trigger: ACCAACATCTGGACCTTGGCAGCCAGGCAGGAACAT...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATCCACATCATTCTCACTaGTGCTCCGGCCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYPHHSH*CSGQMP
Trigger: GGGCATTTGGCCGGAGCAGCAGTGAGAATGATGTGG...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCACATTCTACCAGGGGCTaGCACCCATCTGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESHSTRG*HPSAGK
Trigger: CTTCCCTGCAGATGGGTGGCAGCCCCTGGTAGAATG...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGGAAGGGAAGACTTGGTaGTGTCTTCCTGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKEGKTW*CLPAAQ
Trigger: TTGGGCAGCAGGAAGACACCACCAAGTCTTCCCTTC...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCATGGTATCTTTCTTTTaGGCTTCCTGTGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: LECSGGVLGSSDLPISAFMVSFF*ASCATK
Trigger: CTTTGTTGCACAGGAAGCCCAAAAGAAAGATACCAT...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATTGCGCCTCCCGGTCGTaGTTGTCCTTAACTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYCASRS*LSLTAL
Trigger: CAAAGCAGTTAAGGACAACCACGACCGGGAGGCGCA...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGCAGGGAGCCTCTCTTTaGTGCTACAACATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMQGASL*CYNIFP
Trigger: AGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTG...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCAGCAACGGACCCTGTGTaGGCAGGTGAAACTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPATDPV*AGETLK
Trigger: CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGC...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGCTTCTCGAGCTTCTCTaGAGGATGAATTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKLLELL*RMNLKF
Trigger: GAACTTTAAATTCATCCTTCAGAGAAGCTCGAGAAG...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCACTAGCTCCATCGGGCTaGAGTCACTCAGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESLAPSG*SHSESA
Trigger: AGCTGACTCTGAGTGACTTCAGCCCGATGGAGCTAG...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCACTTTTGGGCTTCCTGTaGAACAAAGTGCAGGAGATT +
Preference number: 4 (lower is better)
Translates to: SHARRSGQARQSSGRHSPLLGFL*NKVQEI
Trigger: AATCTCCTGCACTTTGTTGCACAGGAAGCCCAAAAG...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAACCCTCAGCTGCCGCTaGGACACTGTCCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSATLSCR*DTVRVM
Trigger: CATCACTCGGACAGTGTCGCAGCGGCAGCTGAGGGT...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTAGGCCTCCTGGACTGTaGCATCCCAACAGCGTCACT +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTRPPGL*HPNSVT
Trigger: AGTGACGCTGTTGGGATGGCACAGTCCAGGAGGCCT...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGGGGCCCGGGCACTGCTaGCTCGCCTCAAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQGPGHC*LASKCC
Trigger: GCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCC...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATAGGATCACTTGGGTCTaGGAGGTCAAAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYRITWV*EVKAAV
Trigger: CACTGCAGCTTTGACCTCCCAGACCCAAGTGATCCT...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGCATTTTCTTTATCACTaGCCAAGGAGACACAATTCA +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKHFLYH*PRRHNS
Trigger: TGAATTGTGTCTCCTTGGTCAGTGATAAAGAAAATG...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCAGAGCAGCCCTTGAGGTaGGGCTTTTGCTTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPEQPLR*GFCFRD
Trigger: ATCTCTAAAGCAAAAGCCTCACCTCAAGGGCTGCTC...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGCAGTTTAAATCCTACTaGATTGCCGGCATACCCTCC +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMQFKSY*IAGIPS
Trigger: GGAGGGTATGCCGGCAATGCAGTAGGATTTAAACTG...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTCACAGATCCCAAAGCTaGACTTCCAGGCTCATCGGG +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTHRSQS*TSRLIG
Trigger: CCCGATGAGCCTGGAAGTGCAGCTTTGGGATCTGTG...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATACTCAGCACAGCAGGCTaGAGTCCACAGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAILSTAG*SPQASW
Trigger: CCAGGAGGCCTGTGGACTGCAGCCTGCTGTGCTGAG...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGATGATATTCCCAGCCTaGAGCACCAAGTGTAATATT +
Preference number: 4 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVMIFPA*STKCNI
Trigger: AATATTACACTTGGTGCTCCAGGCTGGGAATATCAT...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATAGTCTGGGGAGGTTCCTaGGTGGTTTGGCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIVWGGS*VVWHWA
Trigger: AGCCCAGTGCCAAACCACTCAGGAACCTCCCCAGAC...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTATGGCCCCACATCTGTaGTATGGGAAACAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTMAPHL*YGKQAW
Trigger: CCAAGCCTGTTTCCCATATCACAGATGTGGGGCCAT...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCATCCAGATGTTGGTTTTaGCTCGAACTTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESSRCWF*LELAPP
Trigger: CGGAGGAGCAAGTTCGAGGCAAAACCAACATCTGGA...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCATCCTGTGCAACAAAGTaGAGGAGATTCATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPSCATK*RRFIPG
Trigger: ACCTGGGATGAATCTCCTGCACTTTGTTGCACAGGA...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTGTGGTTGTCCTTAACTaGTTTGTTGAATTTGGTACA +
Preference number: 4 (lower is better)
Translates to: AYGEVQLPATDPVWAGETVVVLN*FVEFGT
Trigger: TGTACCAAATTCAACAAAGCAGTTAAGGACAACCAC...AGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATAAGGGAGCAGGCCCTCTaGACCCTTCTTGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIREQAL*TLLGQQ
Trigger: CTGCTGACCAAGAAGGGTGCAGAGGGCCTGCTCCCT...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATATGGCTCGCCTCAAAGTaGTGCTGTCCTTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIWLASK*CCPWER
Trigger: CCGCTCCCAAGGACAGCAGCACTTTGAGGCGAGCCA...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGAGTGGCACCAGTGGCTaGTTTATCTGTAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKSGTSG*FICNKD
Trigger: GTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGGGGCATCTCTGCCCATaGGTGTCAGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQGHLCP*VSGCCC
Trigger: GCAGCAGCAGCCTGACACCCATGGGCAGAGATGCCC...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATCAACATCTTTCCTTTTaGTGGGTTTGTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYQHLSF*WVCPWA
Trigger: TGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTG...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGCAGTATCTGTGCTGCTaGGGGGATTCTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWQYLCC*GDSGRA
Trigger: GGCCCTCCCAGAATCCCCCCAGCAGCACAGATACTG...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAGCACTGACGGGGTCTTaGGCTCTTCTTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSAALTGS*ALLWDS
Trigger: AGAGTCCCAAAGAAGAGCCCAAGACCCCGTCAGTGC...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATACATCCATCTGGACGCTaGACTGCAGCAGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIHPSGR*TAAGLS
Trigger: GCTGAGCCCTGCTGCAGTCCAGCGTCCAGATGGATG...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTGATACCCAAGGCTTATaGGGAAGTCCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTDTQGL*GSPVAS
Trigger: GCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATC...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGAGAGAGAAGAAAGGCTaGGAGACAGAATGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMREKKG*ETEWFA
Trigger: TGCAAACCATTCTGTCTCCCAGCCTTTCTTCTCTCT...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGTTACAAGAGGTTTTGTaGTCAGGTGCTTTACTATTT +
Preference number: 4 (lower is better)
Translates to: GEVQLPATDPVWAGETLKLQEVL*SGALLF
Trigger: AAATAGTAAAGCACCTGACCACAAAACCTCTTGTAA...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGTTTTGCCTCGAACTTaGTCCTCCGGAATAGTTTTC +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYVLPRT*SSGIVF
Trigger: GAAAACTATTCCGGAGGAGCAAGTTCGAGGCAAAAC...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATATACAGAAAGGAATCTaGCAGAGACAGCTTCGACAC +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYIQKGI*QRQLRH
Trigger: GTGTCGAAGCTGTCTCTGGCAGATTCCTTTCTGTAT...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATAAAGCTGGAGTCCTGGTaGCTCACTTCTGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIKLESW*LTSAGS
Trigger: GGAGCCTGCAGAAGTGAGGCACCAGGACTCCAGCTT...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGCCTTCTTTAGCACCATaGCTTCAATCCGAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: SQTIFRETQPITGYPRLMPSLAP*LQSEVN
Trigger: ATTCACTTCGGATTGAAGCCATGGTGCTAAAGAAGG...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGAGAGGAGTCGTGAAATaGGCATTGGGTAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKRGVVK*ALGRKS
Trigger: ACTTTTTCTACCCAATGCCCATTTCACGACTCCTCT...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCAAACTTTGTGGAGCCCTaGAAATACCTACTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESNFVEP*KYLLRA
Trigger: AGCCCTGAGTAGGTATTTCCAGGGCTCCACAAAGTT...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGTCAGTCTTCACCGTCTaGATCCCAGGAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWSVFTV*IPGGRR
Trigger: TCTCCTGCCTCCTGGGATTCAGACGGTGAAGACTGA...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCACCTTTAAAACTCAGCTaGCTTATGGAAGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPPLKLS*LMEAQH
Trigger: ATGCTGAGCTTCCATAAGTCAGCTGAGTTTTAAAGG...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCATCACCTGCTGCTATCTaGCGCCAGAATAAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSASPAAI*RQNKGQ
Trigger: TTGCCCTTTATTCTGGCGGCAGATAGCAGCAGGTGA...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTCCAAGGTCCAGATGTTaGTTTTGCCTCGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTPRSRC*FCLELA
Trigger: AGCAAGTTCGAGGCAAAACCAACATCTGGACCTTGG...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCATTGGACTCACAGAGGTaGAAAGACCTGTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSALDSQR*KDLWRP
Trigger: TGGTCTCCACAGGTCTTTCCACCTCTGTGAGTCCAA...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCATTCTCGCAAGGTCTCTaGTCCATAATGCTCACTTTT +
Preference number: 4 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESFSQGL*SIMLTF
Trigger: AAAAGTGAGCATTATGGATCAGAGACCTTGCGAGAA...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATAGTGGTGTCTTCCTGCTaGCCAAAGAGCTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIVVSSC*PKSSSM
Trigger: CATTGAGGAGCTCTTTGGGCAGCAGGAAGACACCAC...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGCAGCAAGTGCAGTTCTaGCTCCGTGTTCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWQQVQF*LRVLQR
Trigger: TCTCTGGAGAACACGGAGGCAGAACTGCACTTGCTG...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCAATGGAGATAATTTCTTaGCCTTGGAGAAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPMEIIS*PWRRRH
Trigger: GTGTCTTCTTCTCCAAGGCCAAGAAATTATCTCCAT...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATAGTTCACCATCCCGCTaGATGTTTTCTTTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYSSPSR*MFSFSD
Trigger: ATCACTAAAAGAAAACATCCAGCGGGATGGTGAACT...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGAAATCTTCCATCTGCTaGCAAAGTTCACCATCCCGC +
Preference number: 4 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWKSSIC*QSSPSR
Trigger: GCGGGATGGTGAACTTTGTCAGCAGATGGAAGATTT...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATATCCAATTCGCTTAGATaGCAGGCAACAGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RAVFTRGFVVRCFTISAISNSLR*QATVCR
Trigger: TCTGCAGACTGTTGCCTGTCATCTAAGCGAATTGGA...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAATCTGCTCACACAGATaGATAGAGAAGTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSAICSHR*IEKLST
Trigger: TGTGGACAACTTCTCTATGCATCTGTGTGAGCAGAT...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CCA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCACATTTTCCACCACCATaGACCTTATGCTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSAHFPPP*TLCFEL
Trigger: CAGTTCAAAGCATAAGGTCCATGGTGGTGGAAAATG...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CAA 72 bp CGTCAACCACGTGGATTCCCCACAAACGCATCATATTaGCCTAAATCCATCTATCTACCAATGTCAGATCTA +
Preference number: 4 (lower is better)
Translates to: RQPRGFPTNASY*PKSIYLPMSDL
Trigger: TAGATCTGACATTGGTAGATAGATGGATTTAGGCAAATATGATGCGTTTGTGGGGAATCCACGTGGTTGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTGTTTGCTTTTGTGTCTaGCAATTTGAGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTVCFCV*QFEQRR
Trigger: TCTTCTTTGCTCAAATTGGCAGACACAAAAGCAAAC...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CAA 72 bp TTCCCAATTAGTCTCAGAGGAGTCGTGAAATGGGCATaGGGTAGAAAAAGTCCCATGTTTTCAACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FPISLRGVVKWA*GRKSPMFSTVS
Trigger: AGAAACAGTTGAAAACATGGGACTTTTTCTACCCAATGCCCATTTCACGACTCCTCTGAGACTAATTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGTTCAACTGTTTCTTTTaGATAAAGCCTGATTCCCCC +
Preference number: 4 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQFNCFF*IKPDSP
Trigger: GGGGGAATCAGGCTTTATTCAAAAGAAACAGTTGAA...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR GCA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGCCACCATGGACCTTATaGTTTGAACTGTTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQPPWTL*FELFCL
Trigger: TAGACAAAACAGTTCAAAGCATAAGGTCCATGGTGG...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR TCA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGAAAATATCTTCATACTaGGGATATACTGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQKISSY*GYTGQV
Trigger: CACTTGGCCAGTATATCCTCAGTATGAAGATATTTT...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
3UTR CAA 72 bp CTTGCATCCATTTTCCACCACCATGGACCTTATGCTTaGAACTGTTTTGTCTACCTGATTAAATATATAACT +
Preference number: 4 (lower is better)
Translates to: LASIFHHHGPYA*NCFVYLIKYIT
Trigger: AGTTATATATTTAATCAGGTAGACAAAACAGTTCAAAGCATAAGGTCCATGGTGGTGGAAAATGGATGCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp TGCCTCACTTCTGCAGGCTCCAGGCAGGCTATCGTGGGCCGGGCCTaGCGGGGGCTGCTCCGGGGCAGGCTGTGGAACTTATTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: CLTSAGSRQAIVGRA*RGLLRGRLWNLLGS
Trigger: GGAGCCCAATAAGTTCCACAGCCTGCCCCGGAGCAGCCCCCGGCAGGCCCGGCCCACGATAGCCTGCCTGGAGCCTGCAGAAGTGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp GCCGGGCCTGCCGGGGGCTGCTCCGGGGCAGGCTGTGGAACTTATTaGGCTCCTCAGGGCTGCCGGTGGAGCTCTCCAAGAAGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: AGPAGGCSGAGCGTY*APQGCRWSSPRRSA
Trigger: TGCTGACCTTCTTGGAGAGCTCCACCGGCAGCCCTGAGGAGCCCAATAAGTTCCACAGCCTGCCCCGGAGCAGCCCCCGGCAGGCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp TGGAGCCGCTGCTCCCCCGCGGCAGCCTCTGCTCTTCGGCGCCTGTaGAGGCCCTCCGCACGGAGTTCTGGCGTGACCACACAGTATCTG +
Preference number: 5 (lower is better)
Translates to: WSRCSPAAASALRRL*RPSARSSGVTTQYL
Trigger: CAGATACTGTGTGGTCACGCCAGAACTCCGTGCGGAGGGCCTCCACAGGCGCCGAAGAGCAGAGGCTGCCGCGGGGGAGCAGCGGCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp GACCCTCCGCAGACTCTGGGCGCTTCTTGGGGGCCCGGGCACTGCTaGCTCGCCTCAAAGTGCTGCTGTCCTTGGGAGCGGCATCCTCGG +
Preference number: 5 (lower is better)
Translates to: DPPQTLGASWGPGHC*LASKCCCPWERHPR
Trigger: CCGAGGATGCCGCTCCCAAGGACAGCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp TGGGACCCTCCGCAGACTCTGGGCGCTTCTTGGGGGCCCGGGCACTaGTGGCTCGCCTCAAAGTGCTGCTGTCCTTGGGAGCGGCATCCT +
Preference number: 5 (lower is better)
Translates to: WDPPQTLGASWGPGH*WLASKCCCPWERHP
Trigger: AGGATGCCGCTCCCAAGGACAGCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp AGGACACTGACGCCCTGGCGCCGAGCTCTGGGGAAGGCAGAGGCATaGTTCTCAGGCTGGGCGGCTGCAAGCTGGTGCGCCTGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: RTLTPWRRALGKAEA*FSGWAAASWCACAE
Trigger: CTCAGCACAGGCGCACCAGCTTGCAGCCGCCCAGCCTGAGAACCATGCCTCTGCCTTCCCCAGAGCTCGGCGCCAGGGCGTCAGTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp CCTCCGTGTTGGCACTGGGACCCTCCGCAGACTCTGGGCGCTTCTTaGGGGCCCGGGCACTGCTGGCTCGCCTCAAAGTGCTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: PPCWHWDPPQTLGAS*GPGHCWLASKCCCP
Trigger: AGGACAGCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTCCCAGTGCCAACACGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp CTTCAGAGGGGCCTCCGTGTTGGCACTGGGACCCTCCGCAGACTCTaGGCGCTTCTTGGGGGCCCGGGCACTGCTGGCTCGCCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: LQRGLRVGTGTLRRL*ALLGGPGTAGSPQS
Trigger: ACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTCCCAGTGCCAACACGGAGGCCCCTCTGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp CCCTCCGCACGGAGTTCTGGCGTGACCACACAGTATCTGTGCTGCTaGGGGGATTCTGGGAGGGCCCCCGGGATGACAGCTCTGGTCGCC +
Preference number: 5 (lower is better)
Translates to: PSARSSGVTTQYLCC*GDSGRAPGMTALVA
Trigger: GGCGACCAGAGCTGTCATCCCGGGGGCCCTCCCAGAATCCCCCCAGCAGCACAGATACTGTGTGGTCACGCCAGAACTCCGTGCGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp GGCTGCTCCGGGGCAGGCTGTGGAACTTATTGGGCTCCTCAGGGCTaGCGGTGGAGCTCTCCAAGAAGGTCAGCAGCTCCCGGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: GCSGAGCGTYWAPQG*RWSSPRRSAAPGQQ
Trigger: CTGCTGACCGGGAGCTGCTGACCTTCTTGGAGAGCTCCACCGGCAGCCCTGAGGAGCCCAATAAGTTCCACAGCCTGCCCCGGAGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 90 bp GGGACTGCGGGCCCCTATGCCCCACAGACTCTAGCTCCATCGGGCTaGAGTCACTCAGAGTCAGCTGGGAGGTCTCCTCCATGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GTAGPYAPQTLAPSG*SHSESAGRSPPCPG
Trigger: CCCAGGGCATGGAGGAGACCTCCCAGCTGACTCTGAGTGACTTCAGCCCGATGGAGCTAGAGTCTGTGGGGCATAGGGGCCCGCAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp TCCGGGGCAGGCTGTGGAACTTATTGGGCTCCTCAGGGCTGCCGGTaGAGCTCTCCAAGAAGGTCAGCAGCTCCCGGTCAGCAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SGAGCGTYWAPQGCR*SSPRRSAAPGQQRD
Trigger: GTCCCTCTGCTGACCGGGAGCTGCTGACCTTCTTGGAGAGCTCCACCGGCAGCCCTGAGGAGCCCAATAAGTTCCACAGCCTGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 90 bp GCTGGACTTGGTGATGGGCATGACCTTGCGCATGCTCTCGTTCTCTaGGGCGGTCAGGGTCCGCACAGACTTGGCCACTGCCCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: AGLGDGHDLAHALVL*GGQGPHRLGHCPLA
Trigger: AGCCAGGGGGCAGTGGCCAAGTCTGTGCGGACCCTGACCGCCTCAGAGAACGAGAGCATGCGCAAGGTCATGCCCATCACCAAGTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp GGTGTCAGGCTGCTGCTGCTGGCACTGAGGGACTGCGGGCCCCTATaGCCCACAGACTCTAGCTCCATCGGGCTGAAGTCACTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: GVRLLLLALRDCGPL*PTDSSSIGLKSLRV
Trigger: GACTCTGAGTGACTTCAGCCCGATGGAGCTAGAGTCTGTGGGGCATAGGGGCCCGCAGTCCCTCAGTGCCAGCAGCAGCAGCCTGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp GTTCGTGGGGGACGCTGGGCACTGACGGGGTCTTGGGCTCTTCTTTaGGACTCTCAGGGCCCTCGGAGTGGGCGCGGCAGGTCTTATTTT +
Preference number: 5 (lower is better)
Translates to: VRGGRWALTGSWALL*DSQGPRSGRGRSYF
Trigger: AAAATAAGACCTGCCGCGCCCACTCCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAAGACCCCGTCAGTGCCCAGCGTCCCCCACGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAGGGTCCGCACAGACTaGGCCACTGCCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTRVRTD*ATAPWL
Trigger: GAGCCAGGGGGCAGTGGCCAAGTCTGTGCGGACCCT...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp CAACATCTTTCCTTTTGGTGGGTTTGTCCCTGGGCAGGCCGCCCTTaGAGCTGGGCTCACTATCCACAGAGACGGGGGCAGGAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: QHLSFWWVCPWAGRP*SWAHYPQRRGQEPP
Trigger: GGGAGGCTCCTGCCCCCGTCTCTGTGGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 90 bp CCAGGAGGCAGGAGAGGACAGGCACCCATCACTTCCGTAAGGGATTaGGGATTCTCCCCAGCGTGGTCCGACTGGAGTCCTTCCGACGGA +
Preference number: 5 (lower is better)
Translates to: PGGRRGQAPITSVRD*GFSPAWSDWSPSDG
Trigger: TCCGTCGGAAGGACTCCAGTCGGACCACGCTGGGGAGAATCCTCAATCCCTTACGGAAGTGATGGGTGCCTGTCCTCTCCTGCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp AGCTGGGAGGTCTCCTCCATGCCCTGGGAACCCTGGAGGTTGAACTaGGCCAGCCCTGTCACCAGCTCATGCTCCTTAATTCCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SWEVSSMPWEPWRLN*ASPVTSSCSLIPRA
Trigger: GGCTCTGGGAATTAAGGAGCATGAGCTGGTGACAGGGCTGGCCCAGTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGACCTCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp AGGATCTTTGTTCTCAGGGTCGCTGCTACCCACAGATCCCAAAGCTaGACTTCCAGGCTCATCGGGGGCAGCCTTGCCATCCTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: RIFVLRVAATHRSQS*TSRLIGGSLAILQR
Trigger: GCGCTGGAGGATGGCAAGGCTGCCCCCGATGAGCCTGGAAGTGCAGCTTTGGGATCTGTGGGTAGCAGCGACCCTGAGAACAAAGATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp TCACTCAGAGTCAGCTGGGAGGTCTCCTCCATGCCCTGGGAACCCTaGAGGTTGAACTGGGCCAGCCCTGTCACCAGCTCATGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SLRVSWEVSSMPWEP*RLNWASPVTSSCSL
Trigger: TAAGGAGCATGAGCTGGTGACAGGGCTGGCCCAGTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGACCTCCCAGCTGACTCTGAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp CCCACAGACTCTAGCTCCATCGGGCTGAAGTCACTCAGAGTCAGCTaGGAGGTCTCCTCCATGCCCTGGGAACCCTGGAGGTTGAACTGG +
Preference number: 5 (lower is better)
Translates to: PTDSSSIGLKSLRVS*EVSSMPWEPWRLNW
Trigger: CCAGTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGACCTCCCAGCTGACTCTGAGTGACTTCAGCCCGATGGAGCTAGAGTCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp ACATGGTGGAGATGGAGGGGGTGGAGGAGGAGGTGGAGGAGGTGCTaGAGGAGGTGTCTGCCCAATCATGAATCCAGGTGCTGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: TWWRWRGWRRRWRRC*RRCLPNHESRCCGN
Trigger: ATTGCCACAGCACCTGGATTCATGATTGGGCAGACACCTCCTCCAGCACCTCCTCCACCTCCTCCTCCACCCCCTCCATCTCCACCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp GGGCTTGGAGGCCCCGGGAGACGCCTCTTTCAGGGAGCCTCTCTTTaGTGCTACAACATCTTTCCTTTTGGTGGGTTTGTCCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLGGPGRRLFQGASL*CYNIFPFGGFVPGQ
Trigger: CTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGAAAGAGGCGTCTCCCGGGGCCTCCAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACATATGGGGAAGTCCAGTaGCCAGCAACGGACCCTGTG +
Preference number: 5 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTYGEVQ*PATDPV
Trigger: CACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATA...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 90 bp CTGCCTCTTTCCCCATCCTCGTCCCAGAAGTCAGTCTTCACCGTCTaGATCCCAGGAGGCAGGAGAGGACAGGCACCCATCACTTCCGTA +
Preference number: 5 (lower is better)
Translates to: LPLSPSSSQKSVFTV*IPGGRRGQAPITSV
Trigger: TACGGAAGTGATGGGTGCCTGTCCTCTCCTGCCTCCTGGGATTCAGACGGTGAAGACTGACTTCTGGGACGAGGATGGGGAAAGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp CCTCTTTCAGGGAGCCTCTCTTTGGTGCTACAACATCTTTCCTTTTaGTGGGTTTGTCCCTGGGCAGGCCGCCCTTGCAGCTGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: PLSGSLSLVLQHLSF*WVCPWAGRPCSWAH
Trigger: GTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGAAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGGGGCTGGATGTAGGGTaGGAGGAGACTTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMGLDVG*EETWLS
Trigger: GGACAGCCAAGTCTCCTCCAACCCTACATCCAGCCC...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATCTGGGCAGGCCGCCCTaGCAGCTGGGCTCACTATCC +
Preference number: 5 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYLGRPP*QLGSLS
Trigger: GGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAG...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGGGCACTGACGGGGTCTaGGGCTCTTCTTTGGGACTC +
Preference number: 5 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMGTDGV*GSSLGL
Trigger: GAGTCCCAAAGAAGAGCCCAAGACCCCGTCAGTGCC...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGCAGGTGAAACTCTGAAGCACTTCCGTAAGGGATaGAGGATTCTCCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: GEVQLPATDPVWAGETLKHFRKG*RILPSV
Trigger: CACGCTGGGGAGAATCCTCAATCCCTTACGGAAGTG...CTTCAGAGTTTCACCTGCCCACACAGGGTCCGTTGCTGGCAACTGGACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp GGAGGGGGTGGAGGAGGAGGTGGAGGAGGTGCTGGAGGAGGTGTCTaGCCAATCATGAATCCAGGTGCTGTGGCAATATTCCCATTTTCT +
Preference number: 5 (lower is better)
Translates to: GGGGGGGGGGAGGGV*PIMNPGAVAIFPFS
Trigger: AGAAAATGGGAATATTGCCACAGCACCTGGATTCATGATTGGGCAGACACCTCCTCCAGCACCTCCTCCACCTCCTCCTCCACCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp CTCTCTTTGGTGCTACAACATCTTTCCTTTTGGTGGGTTTGTCCCTaGGCAGGCCGCCCTTGCAGCTGGGCTCACTATCCACAGAGACGG +
Preference number: 5 (lower is better)
Translates to: LSLVLQHLSFWWVCP*AGRPCSWAHYPQRR
Trigger: CCGTCTCTGTGGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GGAGCTTGGTACCCAGGGTTCCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAGCCAAGGTCCAGATGTaGGTTTTGCCTCGAACTTGC +
Preference number: 5 (lower is better)
Translates to: GAWYPGFLQEVPIPLLSTAKVQM*VLPRTC
Trigger: GCAAGTTCGAGGCAAAACCAACATCTGGACCTTGGC...TGTGGATAGCAGAGGGATCGGGACCTCTTGGAGGAACCCTGGGTACCAAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCATATGGGAAACAGGCTaGGGAAGAGGTGGTGACTTC +
Preference number: 5 (lower is better)
Translates to: LECSGGVLGSSDLPISAFIWETG*GRGGDF
Trigger: GAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATAT...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp CTTTCAGGGAGCCTCTCTTTGGTGCTACAACATCTTTCCTTTTGGTaGGTTTGTCCCTGGGCAGGCCGCCCTTGCAGCTGGGCTCACTAT +
Preference number: 5 (lower is better)
Translates to: LSGSLSLVLQHLSFW*VCPWAGRPCSWAHY
Trigger: ATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCACTAGGAAGGGAAGACTaGGTGGTGTCTTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SHARRSGQARQSSGRHSPLGRED*VVSSCC
Trigger: GCAGCAGGAAGACACCACCAAGTCTTCCCTTCCTAG...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGGCGCCTCTGCTGGACTaGGTGATGGGCATGACCTTG +
Preference number: 5 (lower is better)
Translates to: SQTIFRETQPITGYPRLMAPLLD*VMGMTL
Trigger: CAAGGTCATGCCCATCACCAAGTCCAGCAGAGGCGC...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCAAAAGTGCTGCTGTCCTaGGGAGCGGCATCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPKVLLS*GAASSG
Trigger: CCCCGAGGATGCCGCTCCCAAGGACAGCAGCACTTT...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAGACTCTGGGCGCTTCTaGGGGGCCCGGGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSADSGRF*GARALL
Trigger: CAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTC...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCAGGCAGAGATGGGTCCTaGCTGATTGACCTGACTTGG +
Preference number: 5 (lower is better)
Translates to: SHARRSGQARQSSGRHSPGRDGS*LIDLTW
Trigger: CCAAGTCAGGTCAATCAGCAAGGACCCATCTCTGCC...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCAGTCCAGATGTTGGTTTaGCCTCGAACTTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SHARRSGQARQSSGRHSPVQMLV*PRTCSS
Trigger: GGAGGAGCAAGTTCGAGGCAAAACCAACATCTGGAC...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATGAGGGTTGGAGGAGACTaGGCTGTCCCCCATTTCTCC +
Preference number: 5 (lower is better)
Translates to: SQTIFRETQPITGYPRLMRVGGD*AVPHFS
Trigger: GGAGAAATGGGGGACAGCCAAGTCTCCTCCAACCCT...CATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCAGTCTTGGGCTCTTCTTaGGGACTCTCAGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPVLGSS*GLSGPS
Trigger: CGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAAGAC...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp CAGGATACCCAAGGCTTATGGGGAAGTCCAGTTGCCAGCAACGGACCCTGTGTGGGTTTTGCCTCGAACTaGCTCCTCCGGAATAGTTTT +
Preference number: 5 (lower is better)
Translates to: QDTQGLWGSPVASNGPCVGFASN*LLRNSF
Trigger: AAAACTATTCCGGAGGAGCAAGTTCGAGGCAAAACC...CACACAGGGTCCGTTGCTGGCAACTGGACTTCCCCATAAGCCTTGGGTATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCTCCGAAGTGAATAGTTaGGCACCTGAATTAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LECSGGVLGSSDLPISAFSEVNS*APELSH
Trigger: ATGGCTTAATTCAGGTGCCAAACTATTCACTTCGGA...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp CTGGAGTGCAGTGGTGGGGTCCTGGGCTCAAGTGACCTTCCCATCTCAGCGTTCTCATCCCAGGTTTGTTaGCTTTTGTGTCTGCCAATT +
Preference number: 5 (lower is better)
Translates to: LECSGGVLGSSDLPISAFSSQVC*LLCLPI
Trigger: AATTGGCAGACACAAAAGCAAACAAACCTGGGATGA...GAACGCTGAGATGGGAAGGTCACTTGAGCCCAGGACCCCACCACTGCACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATATGTGCTGAGGGTGGGTaGGGGGCCTCCTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RAVFTRGFVVRCFTISAICAEGG*GASSWP
Trigger: GGGCCAGGAGGAGGCCCCCAACCCACCCTCAGCACA...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCAAGAGGTCTAGGATCTTaGTTCTCAGGGTCGCTGCTA +
Preference number: 5 (lower is better)
Translates to: SHARRSGQARQSSGRHSPRGLGS*FSGSLL
Trigger: TAGCAGCGACCCTGAGAACAAAGATCCTAGACCTCT...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp TCCTTCAGCCTCTGCAGCTGCCTCAGCTCCTGCGCCTCCCGGTCGTaGTTGTCCTTAACTGCTTTGTTGAATTTGGTACAGAAATCTCTA +
Preference number: 5 (lower is better)
Translates to: SFSLCSCLSSCASRS*LSLTALLNLVQKSL
Trigger: TAGAGATTTCTGTACCAAATTCAACAAAGCAGTTAAGGACAACCACGACCGGGAGGCGCAGGAGCTGAGGCAGCTGCAGAGGCTGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGTGCAGCCTCCCGCCGTaGTGTCGGCGTAGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQCSLPP*CRRSRL
Trigger: GAGGCGGCTACGCCGACACAACGGCGGGAGGCTGCA...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATATCATCGGGGGCAGCCTaGCCATCCTCCAGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: RAVFTRGFVVRCFTISAISSGAA*PSSSAG
Trigger: CCCAGCGCTGGAGGATGGCAAGGCTGCCCCCGATGA...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGAGAGGGGCCTCCGTGTaGGCACTGGGACCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWRGASV*ALGPSA
Trigger: TGCGGAGGGTCCCAGTGCCAACACGGAGGCCCCTCT...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp GGGAAGACTTGGTGGTGTCTTCCTGCTGCCCAAAGAGCTCCTCAATaGTCTTTGTATCAATTTGGTAGTGATGTTCCTGCCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GKTWWCLPAAQRAPQ*SLYQFGSDVPAWLP
Trigger: TGGCAGCCAGGCAGGAACATCACTACCAAATTGATACAAAGACCATTGAGGAGCTCTTTGGGCAGCAGGAAGACACCACCAAGTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp ACACAAACATCAAACTTGTGTAGCACTTTTTCACCTGCTGCTATCTaGCGCCAGAATAAAGGGCAACTGTCCTCTTCCAAACCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: TQTSNLCSTFSPAAI*RQNKGQLSSSKPAA
Trigger: GGCCGCGGGTTTGGAAGAGGACAGTTGCCCTTTATTCTGGCGGCAGATAGCAGCAGGTGAAAAAGTGCTACACAAGTTTGATGTTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp CTCAATGGTCTTTGTATCAATTTGGTAGTGATGTTCCTGCCTGGCTaGCAAGGTCCAGATGTTGGTTTTGCCTCGAACTTGCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LNGLCINLVVMFLPG*QGPDVGFASNLLLR
Trigger: CCGGAGGAGCAAGTTCGAGGCAAAACCAACATCTGGACCTTGGCAGCCAGGCAGGAACATCACTACCAAATTGATACAAAGACCATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp TATCCACAAATCCACAAACTTAGAATCACTTGCATCCATTTTCCACCACCATGGTGGGAACCCTGGAGGTaGAACTGGGCCAGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: YPQIHKLRITCIHFPPPWWEPWR*NWASPV
Trigger: GACAGGGCTGGCCCAGTTCAACCTCCAGGGTTCCCA...CCATGGTGGTGGAAAATGGATGCAAGTGATTCTAAGTTTGTGGATTTGTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGTGGCACCAGTGGCTGCTTTATCTGTAACAAAGACATGCTGCCTCTTTCCCCAACAACATCTTTCCTTTaGGTGGGTTTGTCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SGTSGCFICNKDMLPLSPTTSFL*VGLSLG
Trigger: GCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGT...TGGGGAAAGAGGCAGCATGTCTTTGTTACAGATAAAGCAGCCACTGGTGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp CCTCCAAGAGGTCCCGATCCCTCTGCTATCCACAAATCCACAAACTTAGAATCAGGGAGACAGAATGGTTaGCACCTCCCTGTAACCAGA +
Preference number: 5 (lower is better)
Translates to: PPRGPDPSAIHKSTNLESGRQNG*HLPVTR
Trigger: TCTGGTTACAGGGAGGTGCAAACCATTCTGTCTCCC...TGATTCTAAGTTTGTGGATTTGTGGATAGCAGAGGGATCGGGACCTCTTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp CCCACATCTGTGATATGGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGGTCGTGAAATGGGCATaGGGTAGAAAAAGTCCCATG +
Preference number: 5 (lower is better)
Translates to: PTSVIWETGLGRGGDFPKVVKWA*GRKSPM
Trigger: CATGGGACTTTTTCTACCCAATGCCCATTTCACGAC...CTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCCATATCACAGATGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGTCATGCACGGAGAAGTGGGCAAGCCAGACAATCTTCAGGGAGACACAGCCCAAGATGCATAGAGAAGTaGTCCACAGGGCTAAGTAAA +
Preference number: 5 (lower is better)
Translates to: SHARRSGQARQSSGRHSPRCIEK*STGLSK
Trigger: TTTACTTAGCCCTGTGGACAACTTCTCTATGCATCT...TGGGCTGTGTCTCCCTGAAGATTGTCTGGCTTGCCCACTTCTCCGTGCATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp GCTCCTCAATGGTCTTTGTATCAATTTGGTAGTGATGTTCCTGCCTaGCTGCCAAGGTCCAGATGTTGGTTTTGCCTCGAACTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: APQWSLYQFGSDVPA*LPRSRCWFCLELAP
Trigger: AGGAGCAAGTTCGAGGCAAAACCAACATCTGGACCTTGGCAGCCAGGCAGGAACATCACTACCAAATTGATACAAAGACCATTGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGACATGCATAGTACTGTaGCCTCCTATGGAGATAATT +
Preference number: 5 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMTCIVL*PPMEII
Trigger: AATTATCTCCATAGGAGGCAACAGTACTATGCATGT...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GGGAAACAGGCTTGGGAAGAGGTGGTGACTTCCCAAAGTCACCCAGCATCCATGGCTCCTCAATGGTCTTaGTATCAATTTGGTAGTGAT +
Preference number: 5 (lower is better)
Translates to: GKQAWEEVVTSQSHPASMAPQWS*YQFGSD
Trigger: ATCACTACCAAATTGATACAAAGACCATTGAGGAGC...CATGGATGCTGGGTGACTTTGGGAAGTCACCACCTCTTCCCAAGCCTGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATAAGGCTGTGGAACTTATaGGGCTCCTCAGGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIRLWNL*GSSGLP
Trigger: CGGCAGCCCTGAGGAGCCCAATAAGTTCCACAGCCT...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGTTCCTTTTGGTGGGTTaGTCCCTGGGCAGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQFLLVG*SLGRPP
Trigger: GGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAA...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGGAAGGGCCTGGGAGCTaGGTACCCAGGGTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQEGPGS*VPRVPP
Trigger: TGGAGGAACCCTGGGTACCAAGCTCCCAGGCCCTTC...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTTTAAATCCTACTGCATaGCCGGCATACCCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTLNPTA*PAYPPA
Trigger: TGCAGGAGGGTATGCCGGCAATGCAGTAGGATTTAA...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTTCAGGGAGCCTCTCTTaGGTGCTACAACATCTTTCC +
Preference number: 5 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTSGSLS*VLQHLS
Trigger: GGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGA...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATACGGGGTTTCTCCATGTaGCCTAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIRGFSM*PRLVSN
Trigger: GTTCGAGACCAGCCTAGGCAACATGGAGAAACCCCG...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp ACTGCATTGCCGGCATACCCTCCTGCATTCATGATATTCCCAGCCTaGAGCACCAAGTGTAATATTGAATGTAGCTCTTCACATGACATC +
Preference number: 5 (lower is better)
Translates to: TALPAYPPAFMIFPA*STKCNIECSSSHDI
Trigger: GATGTCATGTGAAGAGCTACATTCAATATTACACTTGGTGCTCCAGGCTGGGAATATCATGAATGCAGGAGGGTATGCCGGCAATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCATGGAGGAACATGGGATaGGAAAGACGCACACTGTCA +
Preference number: 5 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSAWRNMG*ERRTLS
Trigger: TGACAGTGTGCGTCTTTCCAATCCCATGTTCCTCCA...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AAGCCAGACAATCTTCAGGGAGACACAGCCCATCACAGGATACCCAAGGCTTATCATGGACCTTATGCTTaGAACTGTTTTGTCTACCTG +
Preference number: 5 (lower is better)
Translates to: KPDNLQGDTAHHRIPKAYHGPYA*NCFVYL
Trigger: CAGGTAGACAAAACAGTTCAAAGCATAAGGTCCATG...ATAAGCCTTGGGTATCCTGTGATGGGCTGTGTCTCCCTGAAGATTGTCTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAGATAATTTCTTGGCCTaGGAGAAGAAGACACAAACA +
Preference number: 5 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSADNFLA*EKKTQT
Trigger: TGTTTGTGTCTTCTTCTCCAAGGCCAAGAAATTATC...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGAAGGACACTCTTCCCTaGAACATGAACATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQKDTLP*NMNMVE
Trigger: CTCCACCATGTTCATGTTCAAGGGAAGAGTGTCCTT...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp ACTTATGGAAGCTCAGCATTTCCAATTCGCTTAGATGACAGGCAACAGTCTGCAAATGGTATCTTTCTTTaGGGCTTCCTGTGCAACAAA +
Preference number: 5 (lower is better)
Translates to: TYGSSAFPIRLDDRQQSANGIFL*GFLCNK
Trigger: TTTGTTGCACAGGAAGCCCAAAAGAAAGATACCATT...TGCAGACTGTTGCCTGTCATCTAAGCGAATTGGAAATGCTGAGCTTCCATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp GAAGCATCTGATTTCTGTCTGAGTCCAACTTTCCCTCCTGTTCCTAGACAGACTTTTTTACAAGAGGTTTaGTGGTCAGGTGCTTTACTA +
Preference number: 5 (lower is better)
Translates to: EASDFCLSPTFPPVPRQTFLQEV*WSGALL
Trigger: TAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAA...AGTCTGTCTAGGAACAGGAGGGAAAGTTGGACTCAGACAGAAATCAGATGCTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGAGATTCATCCCAGGTTaGTTTGCTTTTGTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQRFIPG*FAFVSA
Trigger: GGCAGACACAAAAGCAAACAAACCTGGGATGAATCT...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 90 bp TTCCCATTTTCTTTATCACTGACCAAGGAGACACAATTCATAACATaGATAGTACTGTTGCCTCCTATGGAGATAATTTCTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: FPFSLSLTKETQFIT*IVLLPPMEIISWPW
Trigger: CCAAGGCCAAGAAATTATCTCCATAGGAGGCAACAGTACTATGCATGTTATGAATTGTGTCTCCTTGGTCAGTGATAAAGAAAATGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 90 bp ACATGCATAGTACTGTTGCCTCCTATGGAGATAATTTCTTGGCCTTaGAGAAGAAGACACAAACATCAAACTTGTGTAGCACTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: TCIVLLPPMEIISWP*RRRHKHQTCVALFH
Trigger: GTGAAAAAGTGCTACACAAGTTTGATGTTTGTGTCTTCTTCTCCAAGGCCAAGAAATTATCTCCATAGGAGGCAACAGTACTATGCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp TTTCCACTAAAATATGGCACTTCTAGATTCCAGAGAAATCCAGCATTCTACCAGGGTCTTTGTATCAATTaGGTAGTGATGTTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: FPLKYGTSRFQRNPAFYQGLCIN*VVMFLP
Trigger: AGGCAGGAACATCACTACCAAATTGATACAAAGACC...CTGGTAGAATGCTGGATTTCTCTGGAATCTAGAAGTGCCATATTTTAGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS-3UTR CAA 90 bp AGGGCTGTTTTTACAAGAGGTTTTGTGGTCAGGTGCTTTACTATTTCAGCCATATTTGTGTCTGCCAATTaGAGCAAAGAAGACAGTTTA +
Preference number: 5 (lower is better)
Translates to: RAVFTRGFVVRCFTISAIFVSAN*SKEDSL
Trigger: TAAACTGTCTTCTTTGCTCAAATTGGCAGACACAAA...TATGGCTGAAATAGTAAAGCACCTGACCACAAAACCTCTTGTAAAAACAGCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GCGGTCAGGGTCCGCACAGACTTGGCCACTGCCCCCTaGCTCCGCCGGGCGCTCCCGGGCTTGGAGGCCCCG +
Preference number: 6 (lower is better)
Translates to: AVRVRTDLATAP*LRRALPGLEAP
Trigger: CGGGGCCTCCAAGCCCGGGAGCGCCCGGCGGAGCCAGGGGGCAGTGGCCAAGTCTGTGCGGACCCTGACCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp GAACGTCCCTCCCCGGACGGGTGCTGCTGGAGCCGCTaGTCCCCCGCGGCAGCCTCTGCTCTTCGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: ERPSPDGCCWSR*SPAAASALRRL
Trigger: CAGGCGCCGAAGAGCAGAGGCTGCCGCGGGGGAGCAGCGGCTCCAGCAGCACCCGTCCGGGGAGGGACGTTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp TCTCGTTCTCTGAGGCGGTCAGGGTCCGCACAGACTTaGCCACTGCCCCCTGGCTCCGCCGGGCGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SRSLRRSGSAQT*PLPPGSAGRSR
Trigger: CCGGGAGCGCCCGGCGGAGCCAGGGGGCAGTGGCCAAGTCTGTGCGGACCCTGACCGCCTCAGAGAACGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GGCCTCCGTGTTGGCACTGGGACCCTCCGCAGACTCTaGGCGCTTCTTGGGGGCCCGGGCACTGCTGGCTCG +
Preference number: 6 (lower is better)
Translates to: GLRVGTGTLRRL*ALLGGPGTAGS
Trigger: CGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTCCCAGTGCCAACACGGAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp CTCTCGTTCTCTGAGGCGGTCAGGGTCCGCACAGACTaGGCCACTGCCCCCTGGCTCCGCCGGGCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: LSFSEAVRVRTD*ATAPWLRRALP
Trigger: CGGGAGCGCCCGGCGGAGCCAGGGGGCAGTGGCCAAGTCTGTGCGGACCCTGACCGCCTCAGAGAACGAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp TCTGCAGGCTCCAGGCAGGCTATCGTGGGCCGGGCCTaGCGGGGGCTGCTCCGGGGCAGGCTGTGGAACTTA +
Preference number: 6 (lower is better)
Translates to: SAGSRQAIVGRA*RGLLRGRLWNL
Trigger: TAAGTTCCACAGCCTGCCCCGGAGCAGCCCCCGGCAGGCCCGGCCCACGATAGCCTGCCTGGAGCCTGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp ACGCCCTGGCGCCGAGCTCTGGGGAAGGCAGAGGCATaGTTCTCAGGCTGGGCGGCTGCAAGCTGGTGCGCC +
Preference number: 6 (lower is better)
Translates to: TPWRRALGKAEA*FSGWAAASWCA
Trigger: GGCGCACCAGCTTGCAGCCGCCCAGCCTGAGAACCATGCCTCTGCCTTCCCCAGAGCTCGGCGCCAGGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp GGCCGGGCCTGCCGGGGGCTGCTCCGGGGCAGGCTGTGGAACTTATaGGGCTCCTCAGGGCTGCCGGTGGAGCTCTCCAAGAAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: GRACRGLLRGRLWNL*GSSGLPVELSKKVS
Trigger: GCTGACCTTCTTGGAGAGCTCCACCGGCAGCCCTGAGGAGCCCAATAAGTTCCACAGCCTGCCCCGGAGCAGCCCCCGGCAGGCCCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp GCCTCCGTGTTGGCACTGGGACCCTCCGCAGACTCTGGGCGCTTCTaGGGGGCCCGGGCACTGCTGGCTCGCCTCAAAGTGCTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: ASVLALGPSADSGRF*GARALLARLKVLLS
Trigger: GGACAGCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTCCCAGTGCCAACACGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp TCTTGGGGGCCCGGGCACTGCTGGCTCGCCTCAAAGTaGTGCTGTCCTTGGGAGCGGCATCCTCGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: SWGPGHCWLASK*CCPWERHPRGP
Trigger: GGGACCCCGAGGATGCCGCTCCCAAGGACAGCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GGACGCTGGGCACTGACGGGGTCTTGGGCTCTTCTTTaGGACTCTCAGGGCCCTCGGAGTGGGCGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: GRWALTGSWALL*DSQGPRSGRGR
Trigger: CCTGCCGCGCCCACTCCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAAGACCCCGTCAGTGCCCAGCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp TGGCACTGGGACCCTCCGCAGACTCTGGGCGCTTCTTaGGGGCCCGGGCACTGCTGGCTCGCCTCAAAGTGC +
Preference number: 6 (lower is better)
Translates to: WHWDPPQTLGAS*GPGHCWLASKC
Trigger: GCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTCCCAGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp CCCCTCTGGCCTTCAGAGGGGCCTCCGTGTTGGCACTaGGACCCTCCGCAGACTCTGGGCGCTTCTTGGGGG +
Preference number: 6 (lower is better)
Translates to: PLWPSEGPPCWH*DPPQTLGASWG
Trigger: CCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTCCCAGTGCCAACACGGAGGCCCCTCTGAAGGCCAGAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp GGGACGCTGGGCACTGACGGGGTCTTGGGCTCTTCTTaGGGACTCTCAGGGCCCTCGGAGTGGGCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: GTLGTDGVLGSS*GLSGPSEWARQ
Trigger: CTGCCGCGCCCACTCCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAAGACCCCGTCAGTGCCCAGCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp CCGCAGACTCTGGGCGCTTCTTGGGGGCCCGGGCACTaGTGGCTCGCCTCAAAGTGCTGCTGTCCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: PQTLGASWGPGH*WLASKCCCPWE
Trigger: CTCCCAAGGACAGCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp AGGCTCATCGGGGGCAGCCTTGCCATCCTCCAGCGCTaGGCTGAGACTCCCCAGGGCATCTCTGCCCATGGG +
Preference number: 6 (lower is better)
Translates to: RLIGGSLAILQR*AETPQGISAHG
Trigger: CCCATGGGCAGAGATGCCCTGGGGAGTCTCAGCCCAGCGCTGGAGGATGGCAAGGCTGCCCCCGATGAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp CAGACTCTGGGCGCTTCTTGGGGGCCCGGGCACTGCTaGCTCGCCTCAAAGTGCTGCTGTCCTTGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: QTLGASWGPGHC*LASKCCCPWER
Trigger: CCGCTCCCAAGGACAGCAGCACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp TTGGCACTGGGACCCTCCGCAGACTCTGGGCGCTTCTaGGGGGCCCGGGCACTGCTGGCTCGCCTCAAAGTG +
Preference number: 6 (lower is better)
Translates to: LALGPSADSGRF*GARALLARLKV
Trigger: CACTTTGAGGCGAGCCAGCAGTGCCCGGGCCCCCAAGAAGCGCCCAGAGTCTGCGGAGGGTCCCAGTGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 72 bp GGCTCACCGGCTCACTGTACCTCTTTCGGAGGACACTaGCGCCCTGGCGCCGAGCTCTGGGGAAGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GSPAHCTSFGGH*RPGAELWGRQR
Trigger: CCTCTGCCTTCCCCAGAGCTCGGCGCCAGGGCGTCAGTGTCCTCCGAAAGAGGTACAGTGAGCCGGTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp CGAGCTCTGGGGAAGGCAGAGGCATGGTTCTCAGGCTaGGCGGCTGCAAGCTGGTGCGCCTGTGCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: RALGKAEAWFSG*AAASWCACAEG
Trigger: ACCCTCAGCACAGGCGCACCAGCTTGCAGCCGCCCAGCCTGAGAACCATGCCTCTGCCTTCCCCAGAGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp TGGTGGGTTTGTCCCTGGGCAGGCCGCCCTTGCAGCTaGGCTCACTATCCACAGAGACGGGGGCAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: WWVCPWAGRPCS*AHYPQRRGQEP
Trigger: AGGCTCCTGCCCCCGTCTCTGTGGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp CCCAAAGCTGCACTTCCAGGCTCATCGGGGGCAGCCTaGCCATCCTCCAGCGCTGGGCTGAGACTCCCCAGG +
Preference number: 6 (lower is better)
Translates to: PKAALPGSSGAA*PSSSAGLRLPR
Trigger: CCTGGGGAGTCTCAGCCCAGCGCTGGAGGATGGCAAGGCTGCCCCCGATGAGCCTGGAAGTGCAGCTTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp CGCCTCCAGCCGGCGCCTCTGCTGGACTTGGTGATGGGCATGACCTaGCGCATGCTCTCGTTCTCTGAGGCGGTCAGGGTCCGCACAGAC +
Preference number: 6 (lower is better)
Translates to: RLQPAPLLDLVMGMT*RMLSFSEAVRVRTD
Trigger: GTCTGTGCGGACCCTGACCGCCTCAGAGAACGAGAGCATGCGCAAGGTCATGCCCATCACCAAGTCCAGCAGAGGCGCCGGCTGGAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp GGTAGTTCGTGGGGGACGCTGGGCACTGACGGGGTCTaGGGCTCTTCTTTGGGACTCTCAGGGCCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: GSSWGTLGTDGV*GSSLGLSGPSE
Trigger: CTCCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAAGACCCCGTCAGTGCCCAGCGTCCCCCACGAACTACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp CCCACAGATCCCAAAGCTGCACTTCCAGGCTCATCGGGGGCAGCCTaGCCATCCTCCAGCGCTGGGCTGAGACTCCCCAGGGCATCTCTG +
Preference number: 6 (lower is better)
Translates to: PTDPKAALPGSSGAA*PSSSAGLRLPRASL
Trigger: CAGAGATGCCCTGGGGAGTCTCAGCCCAGCGCTGGAGGATGGCAAGGCTGCCCCCGATGAGCCTGGAAGTGCAGCTTTGGGATCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp CGGGATGACAGCTCTGGTCGCCTCCAGCCGGCGCCTCTGCTGGACTaGGTGATGGGCATGACCTTGCGCATGCTCTCGTTCTCTGAGGCG +
Preference number: 6 (lower is better)
Translates to: RDDSSGRLQPAPLLD*VMGMTLRMLSFSEA
Trigger: CGCCTCAGAGAACGAGAGCATGCGCAAGGTCATGCCCATCACCAAGTCCAGCAGAGGCGCCGGCTGGAGGCGACCAGAGCTGTCATCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 72 bp CTTTCACCCTCAGCTGCCGCTGCGACACTGTCCGAGTaGTGCCGGGGGCTTTGGCCACGGGAGGAAGATCTG +
Preference number: 6 (lower is better)
Translates to: LSPSAAAATLSE*CRGLWPREEDL
Trigger: CAGATCTTCCTCCCGTGGCCAAAGCCCCCGGCATCACTCGGACAGTGTCGCAGCGGCAGCTGAGGGTGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp CTGCTGCTGCTGGCACTGAGGGACTGCGGGCCCCTATaGCCCACAGACTCTAGCTCCATCGGGCTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: LLLLALRDCGPL*PTDSSSIGLKS
Trigger: TGACTTCAGCCCGATGGAGCTAGAGTCTGTGGGGCATAGGGGCCCGCAGTCCCTCAGTGCCAGCAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp TCCTTTTGGTGGGTTTGTCCCTGGGCAGGCCGCCCTTaGAGCTGGGCTCACTATCCACAGAGACGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SFWWVCPWAGRP*SWAHYPQRRGQ
Trigger: CTGCCCCCGTCTCTGTGGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp CGGAGTTCTGGCGTGACCACACAGTATCTGTGCTGCTaGGGGGATTCTGGGAGGGCCCCCGGGATGACAGCT +
Preference number: 6 (lower is better)
Translates to: RSSGVTTQYLCC*GDSGRAPGMTA
Trigger: AGCTGTCATCCCGGGGGCCCTCCCAGAATCCCCCCAGCAGCACAGATACTGTGTGGTCACGCCAGAACTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GTAGTTCGTGGGGGACGCTGGGCACTGACGGGGTCTTaGGCTCTTCTTTGGGACTCTCAGGGCCCTCGGAGT +
Preference number: 6 (lower is better)
Translates to: VVRGGRWALTGS*ALLWDSQGPRS
Trigger: ACTCCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAAGACCCCGTCAGTGCCCAGCGTCCCCCACGAACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp TGGGAGGTCTCCTCCATGCCCTGGGAACCCTGGAGGTaGAACTGGGCCAGCCCTGTCACCAGCTCATGCTCC +
Preference number: 6 (lower is better)
Translates to: WEVSSMPWEPWR*NWASPVTSSCS
Trigger: GGAGCATGAGCTGGTGACAGGGCTGGCCCAGTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGACCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp CCGGCGCCTCTGCTGGACTTGGTGATGGGCATGACCTaGCGCATGCTCTCGTTCTCTGAGGCGGTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: PAPLLDLVMGMT*RMLSFSEAVRV
Trigger: GACCCTGACCGCCTCAGAGAACGAGAGCATGCGCAAGGTCATGCCCATCACCAAGTCCAGCAGAGGCGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp AGCTCTGGTCGCCTCCAGCCGGCGCCTCTGCTGGACTaGGTGATGGGCATGACCTTGCGCATGCTCTCGTTC +
Preference number: 6 (lower is better)
Translates to: SSGRLQPAPLLD*VMGMTLRMLSF
Trigger: GAACGAGAGCATGCGCAAGGTCATGCCCATCACCAAGTCCAGCAGAGGCGCCGGCTGGAGGCGACCAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp AGTTCGTGGGGGACGCTGGGCACTGACGGGGTCTTGGGCTCTTCTTaGGGACTCTCAGGGCCCTCGGAGTGGGCGCGGCAGGTCTTATTT +
Preference number: 6 (lower is better)
Translates to: SSWGTLGTDGVLGSS*GLSGPSEWARQVLF
Trigger: AAATAAGACCTGCCGCGCCCACTCCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAAGACCCCGTCAGTGCCCAGCGTCCCCCACGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp ACCCTCAGCTGCCGCTGCGACACTGTCCGAGTGATGCCGGGGGCTTaGGCCACGGGAGGAAGATCTGTTCTCATGCTTCGAGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: TLSCRCDTVRVMPGA*ATGGRSVLMLREEE
Trigger: CTCCTCCTCTCGAAGCATGAGAACAGATCTTCCTCCCGTGGCCAAAGCCCCCGGCATCACTCGGACAGTGTCGCAGCGGCAGCTGAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp CCCAGGAGGCAGGAGAGGACAGGCACCCATCACTTCCGTAAGGGATaGAGGATTCTCCCCAGCGTGGTCCGACTGGAGTCCTTCCGACGG +
Preference number: 6 (lower is better)
Translates to: PRRQERTGTHHFRKG*RILPSVVRLESFRR
Trigger: CCGTCGGAAGGACTCCAGTCGGACCACGCTGGGGAGAATCCTCAATCCCTTACGGAAGTGATGGGTGCCTGTCCTCTCCTGCCTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 72 bp GGTGATGGGCATGACCTTGCGCATGCTCTCGTTCTCTaGGGCGGTCAGGGTCCGCACAGACTTGGCCACTGC +
Preference number: 6 (lower is better)
Translates to: GDGHDLAHALVL*GGQGPHRLGHC
Trigger: GCAGTGGCCAAGTCTGTGCGGACCCTGACCGCCTCAGAGAACGAGAGCATGCGCAAGGTCATGCCCATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GGCTGTGGAACTTATTGGGCTCCTCAGGGCTGCCGGTaGAGCTCTCCAAGAAGGTCAGCAGCTCCCGGTCAG +
Preference number: 6 (lower is better)
Translates to: GCGTYWAPQGCR*SSPRRSAAPGQ
Trigger: CTGACCGGGAGCTGCTGACCTTCTTGGAGAGCTCCACCGGCAGCCCTGAGGAGCCCAATAAGTTCCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp TCACTCAGAGTCAGCTGGGAGGTCTCCTCCATGCCCTaGGAACCCTGGAGGTTGAACTGGGCCAGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: SLRVSWEVSSMP*EPWRLNWASPV
Trigger: GACAGGGCTGGCCCAGTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGACCTCCCAGCTGACTCTGAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp TTCCTTTTGGTGGGTTTGTCCCTGGGCAGGCCGCCCTaGCAGCTGGGCTCACTATCCACAGAGACGGGGGCA +
Preference number: 6 (lower is better)
Translates to: FLLVGLSLGRPP*QLGSLSTETGA
Trigger: TGCCCCCGTCTCTGTGGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp ACAACATCTTTCCTTTTGGTGGGTTTGTCCCTGGGCAGGCCGCCCTaGCAGCTGGGCTCACTATCCACAGAGACGGGGGCAGGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: TTSFLLVGLSLGRPP*QLGSLSTETGAGAS
Trigger: GGAGGCTCCTGCCCCCGTCTCTGTGGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp TGGAGATGGAGGGGGTGGAGGAGGAGGTGGAGGAGGTaGTGGAGGAGGTGTCTGCCCAATCATGAATCCAGG +
Preference number: 6 (lower is better)
Translates to: WRWRGWRRRWRR*WRRCLPNHESR
Trigger: CCTGGATTCATGATTGGGCAGACACCTCCTCCAGCACCTCCTCCACCTCCTCCTCCACCCCCTCCATCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp GTTCTCAGGGTCGCTGCTACCCACAGATCCCAAAGCTaGACTTCCAGGCTCATCGGGGGCAGCCTTGCCATC +
Preference number: 6 (lower is better)
Translates to: VLRVAATHRSQS*TSRLIGGSLAI
Trigger: GATGGCAAGGCTGCCCCCGATGAGCCTGGAAGTGCAGCTTTGGGATCTGTGGGTAGCAGCGACCCTGAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp AGATGGAGGGGGTGGAGGAGGAGGTGGAGGAGGTGCTaGAGGAGGTGTCTGCCCAATCATGAATCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RWRGWRRRWRRC*RRCLPNHESRC
Trigger: GCACCTGGATTCATGATTGGGCAGACACCTCCTCCAGCACCTCCTCCACCTCCTCCTCCACCCCCTCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp TGCCGCTGCGACACTGTCCGAGTGATGCCGGGGGCTTaGGCCACGGGAGGAAGATCTGTTCTCATGCTTCGA +
Preference number: 6 (lower is better)
Translates to: CRCDTVRVMPGA*ATGGRSVLMLR
Trigger: TCGAAGCATGAGAACAGATCTTCCTCCCGTGGCCAAAGCCCCCGGCATCACTCGGACAGTGTCGCAGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp AGAGTCAGCTGGGAGGTCTCCTCCATGCCCTGGGAACCCTGGAGGTaGAACTGGGCCAGCCCTGTCACCAGCTCATGCTCCTTAATTCCC +
Preference number: 6 (lower is better)
Translates to: RVSWEVSSMPWEPWR*NWASPVTSSCSLIP
Trigger: GGGAATTAAGGAGCATGAGCTGGTGACAGGGCTGGCCCAGTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGACCTCCCAGCTGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp CAGGAGAGGACAGGCACCCATCACTTCCGTAAGGGATaGAGGATTCTCCCCAGCGTGGTCCGACTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: QERTGTHHFRKG*RILPSVVRLES
Trigger: GGACTCCAGTCGGACCACGCTGGGGAGAATCCTCAATCCCTTACGGAAGTGATGGGTGCCTGTCCTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp CGGGCTTGGAGGCCCCGGGAGACGCCTCTTTCAGGGAGCCTCTCTTaGGTGCTACAACATCTTTCCTTTTGGTGGGTTTGTCCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: RAWRPRETPLSGSLS*VLQHLSFWWVCPWA
Trigger: TGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGAAAGAGGCGTCTCCCGGGGCCTCCAAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp GCCTCTTTCAGGGAGCCTCTCTTTGGTGCTACAACATCTTTCCTTTaGGTGGGTTTGTCCCTGGGCAGGCCGCCCTTGCAGCTGGGCTCA +
Preference number: 6 (lower is better)
Translates to: ASFREPLFGATTSFL*VGLSLGRPPLQLGS
Trigger: TGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGAAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 72 bp AGGAGAGGACAGGCACCCATCACTTCCGTAAGGGATTaGGGATTCTCCCCAGCGTGGTCCGACTGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: RRGQAPITSVRD*GFSPAWSDWSP
Trigger: AGGACTCCAGTCGGACCACGCTGGGGAGAATCCTCAATCCCTTACGGAAGTGATGGGTGCCTGTCCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GTCTCCTCCATGCCCTGGGAACCCTGGAGGTTGAACTaGGCCAGCCCTGTCACCAGCTCATGCTCCTTAATT +
Preference number: 6 (lower is better)
Translates to: VSSMPWEPWRLN*ASPVTSSCSLI
Trigger: AATTAAGGAGCATGAGCTGGTGACAGGGCTGGCCCAGTTCAACCTCCAGGGTTCCCAGGGCATGGAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GGGAGCCTCTCTTTGGTGCTACAACATCTTTCCTTTTaGTGGGTTTGTCCCTGGGCAGGCCGCCCTTGCAGC +
Preference number: 6 (lower is better)
Translates to: GSLSLVLQHLSF*WVCPWAGRPCS
Trigger: GCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp TTGGGCTCTTCTTTGGGACTCTCAGGGCCCTCGGAGTaGGCGCGGCAGGTCTTATTTTCCTCAGGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: LGSSLGLSGPSE*ARQVLFSSGFC
Trigger: ACAGAAGCCTGAGGAAAATAAGACCTGCCGCGCCCACTCCGAGGGCCCTGAGAGTCCCAAAGAAGAGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp GGAGGAGGAGGTGGAGGAGGTGCTGGAGGAGGTGTCTaGCCAATCATGAATCCAGGTGCTGTGGCAATATTC +
Preference number: 6 (lower is better)
Translates to: GGGGGGGAGGGV*PIMNPGAVAIF
Trigger: GAATATTGCCACAGCACCTGGATTCATGATTGGGCAGACACCTCCTCCAGCACCTCCTCCACCTCCTCCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp TGGAGGTTGAACTGGGCCAGCCCTGTCACCAGCTCATaGTCCTTAATTCCCAGAGCCAATGGCGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: WRLNWASPVTSS*SLIPRANGERG
Trigger: TCCTCTCTCGCCATTGGCTCTGGGAATTAAGGAGCATGAGCTGGTGACAGGGCTGGCCCAGTTCAACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GTGCTACAACATCTTTCCTTTTGGTGGGTTTGTCCCTaGGCAGGCCGCCCTTGCAGCTGGGCTCACTATCCA +
Preference number: 6 (lower is better)
Translates to: VLQHLSFWWVCP*AGRPCSWAHYP
Trigger: TGGATAGTGAGCCCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp AGCCTCTCTTTGGTGCTACAACATCTTTCCTTTTGGTaGGTTTGTCCCTGGGCAGGCCGCCCTTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SLSLVLQHLSFW*VCPWAGRPCSW
Trigger: CCAGCTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp AGGGAGCCTCTCTTTGGTGCTACAACATCTTTCCTTTaGGTGGGTTTGTCCCTGGGCAGGCCGCCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: REPLFGATTSFL*VGLSLGRPPLQ
Trigger: CTGCAAGGGCGGCCTGCCCAGGGACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp GGCCCCGGGAGACGCCTCTTTCAGGGAGCCTCTCTTTaGTGCTACAACATCTTTCCTTTTGGTGGGTTTGTC +
Preference number: 6 (lower is better)
Translates to: GPGRRLFQGASL*CYNIFPFGGFV
Trigger: GACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGAAAGAGGCGTCTCCCGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp GAGCAGTCGGTGGTGTCCGAGATGCAGAACAGAGGTCTAGGATCTTaGTTCTCAGGGTCGCTGCTACCCACAGATCCCAAAGCTGCACTT +
Preference number: 6 (lower is better)
Translates to: EQSVVSEMQNRGLGS*FSGSLLPTDPKAAL
Trigger: AAGTGCAGCTTTGGGATCTGTGGGTAGCAGCGACCCTGAGAACAAAGATCCTAGACCTCTGTTCTGCATCTCGGACACCACCGACTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp AGGCCCCGGGAGACGCCTCTTTCAGGGAGCCTCTCTTaGGTGCTACAACATCTTTCCTTTTGGTGGGTTTGT +
Preference number: 6 (lower is better)
Translates to: RPRETPLSGSLS*VLQHLSFWWVC
Trigger: ACAAACCCACCAAAAGGAAAGATGTTGTAGCACCAAAGAGAGGCTCCCTGAAAGAGGCGTCTCCCGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp GTGGTGTCCGAGATGCAGAACAGAGGTCTAGGATCTTaGTTCTCAGGGTCGCTGCTACCCACAGATCCCAAA +
Preference number: 6 (lower is better)
Translates to: VVSEMQNRGLGS*FSGSLLPTDPK
Trigger: TTTGGGATCTGTGGGTAGCAGCGACCCTGAGAACAAAGATCCTAGACCTCTGTTCTGCATCTCGGACACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp ACTTGGTGGTGTCTTCCTGCTGCCCAAAGAGCTCCTCAATGGTCTTaGTATCAATTTGGTAGTGATGTTCCTGCCTGGCTGCCAAGGTCC +
Preference number: 6 (lower is better)
Translates to: TWWCLPAAQRAPQWS*YQFGSDVPAWLPRS
Trigger: GGACCTTGGCAGCCAGGCAGGAACATCACTACCAAATTGATACAAAGACCATTGAGGAGCTCTTTGGGCAGCAGGAAGACACCACCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp TGTTCCTGCCTGGCTGCCAAGGTCCAGATGTTGGTTTaGCCTCGAACTTGCTCCTCCGGAATAGTTTTCCAA +
Preference number: 6 (lower is better)
Translates to: CSCLAAKVQMLV*PRTCSSGIVFQ
Trigger: TTGGAAAACTATTCCGGAGGAGCAAGTTCGAGGCAAAACCAACATCTGGACCTTGGCAGCCAGGCAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp TTCAGCCTCTGCAGCTGCCTCAGCTCCTGCGCCTCCCGGTCGTGGTaGTCCTTAACTGCTTTGTTGAATTTGGTACAGAAATCTCTAAAT +
Preference number: 6 (lower is better)
Translates to: FSLCSCLSSCASRSW*SLTALLNLVQKSLN
Trigger: ATTTAGAGATTTCTGTACCAAATTCAACAAAGCAGTTAAGGACAACCACGACCGGGAGGCGCAGGAGCTGAGGCAGCTGCAGAGGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp TGTCTTCCTGCTGCCCAAAGAGCTCCTCAATGGTCTTaGTATCAATTTGGTAGTGATGTTCCTGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: CLPAAQRAPQWS*YQFGSDVPAWL
Trigger: CAGCCAGGCAGGAACATCACTACCAAATTGATACAAAGACCATTGAGGAGCTCTTTGGGCAGCAGGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp CTGAAGGATGAATTTAAAGTTCTTCCTCTCCTAGGAAGGGAAGACTaGGTGGTGTCTTCCTGCTGCCCAAAGAGCTCCTCAATGGTCTTT +
Preference number: 6 (lower is better)
Translates to: LKDEFKVLPLLGRED*VVSSCCPKSSSMVF
Trigger: AAAGACCATTGAGGAGCTCTTTGGGCAGCAGGAAGACACCACCAAGTCTTCCCTTCCTAGGAGAGGAAGAACTTTAAATTCATCCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CCA 72 bp CCGGCATACCCTCCTGCATTCATGATATTCCCAGCCTaGAGCACCAAGTGTAATATTGAATGTAGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: PAYPPAFMIFPA*STKCNIECSSS
Trigger: TGAAGAGCTACATTCAATATTACACTTGGTGCTCCAGGCTGGGAATATCATGAATGCAGGAGGGTATGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp TCAAACTTGTGTAGCACTTTTTCACCTGCTGCTATCTaGCGCCAGAATAAAGGGCAACTGTCCTCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: SNLCSTFSPAAI*RQNKGQLSSSK
Trigger: TTTGGAAGAGGACAGTTGCCCTTTATTCTGGCGGCAGATAGCAGCAGGTGAAAAAGTGCTACACAAGTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 72 bp ACCAAGGAGACACAATTCATAACATGCATAGTACTGTaGCCTCCTATGGAGATAATTTCTTGGCCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: TKETQFITCIVL*PPMEIISWPWR
Trigger: TCTCCAAGGCCAAGAAATTATCTCCATAGGAGGCAACAGTACTATGCATGTTATGAATTGTGTCTCCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS CAA 90 bp TTATCACTGACCAAGGAGACACAATTCATAACATGCATAGTACTGTaGCCTCCTATGGAGATAATTTCTTGGCCTTGGAGAAGAAGACAC +
Preference number: 6 (lower is better)
Translates to: LSLTKETQFITCIVL*PPMEIISWPWRRRH
Trigger: GTGTCTTCTTCTCCAAGGCCAAGAAATTATCTCCATAGGAGGCAACAGTACTATGCATGTTATGAATTGTGTCTCCTTGGTCAGTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS TCA 72 bp CTCTGGCAAAAACTTAAGAAATTCTCGCAAGGTCTCTaGTCCATAATGCTCACTTTTTCCTTGATGAATATC +
Preference number: 6 (lower is better)
Translates to: LWQKLKKFSQGL*SIMLTFSLMNI
Trigger: GATATTCATCAAGGAAAAAGTGAGCATTATGGATCAGAGACCTTGCGAGAATTTCTTAAGTTTTTGCCAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511601.6
CDS GCA 72 bp TTGCTTAAGAAATATCCCAATGTTCATGCTCCGTTTTaGATCCAAAATAGTAATCTCTTCTCGAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LLKKYPNVHAPF*IQNSNLFSSFS
Trigger: AGAGAAGCTCGAGAAGAGATTACTATTTTGGATGCAAAACGGAGCATGAACATTGGGATATTTCTTAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511601.6