RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGR (Homo sapiens)

Ensembl gene IDs: ENSG00000000938

Ensembl transcript IDs: ENST00000374003.7, ENST00000374004.5, ENST00000374005.8, ENST00000399173.5, ENST00000457296.5, ENST00000468038.1, ENST00000475472.5

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTCTATaGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: RWCQSSHVLGDARTL*GSKPAWGLWKNSSG
Trigger: CCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR CCA 90 bp TATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTaGGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGA +
Preference number: 1 (lower is better)
Translates to: YSERWEVLCNLLPQT*AQTPVLDHCIHPAG
Trigger: TCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR CCA 90 bp ATTTACAGAATCAATAAACCAACACATACACACTATTCAGAGAGGTaGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGACC +
Preference number: 1 (lower is better)
Translates to: IYRINKPTHTHYSER*EVLCNLLPQTWAQT
Trigger: GGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTTATTGATTCTGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR CCA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCCAGCCTGGGGGCTTTaGAAGAACAGCTCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQPAWGL*KNSSGD
Trigger: ATCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGG...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR TCA 90 bp TGGGACTCTGGGTGTTCTAAAACTCCACACCTTGGATGCCCCGTGCTTGGTAGGTGGGGCCAGAGCGGATaGGAGATCAGCTCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: WDSGCSKTPHLGCPVLGRWGQSG*EISSGP
Trigger: AGGCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCA...CCTACCAAGCACGGGGCATCCAAGGTGTGGAGTTTTAGAACACCCAGAGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR CCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCGGGATTGGCAAGGACTaGTGGCCACCGCCAGAGAGG +
Preference number: 2 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPGIGKD*WPPPER
Trigger: CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCC...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR CCA 90 bp CACACCTTGGATGCCCCGTGCTTGGTAGGCATTAGGGCCCTCTCCAGCTTCCCCTCTGAGCACTTTGGGTaGGGATGGAGTGAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: HTLDAPCLVGIRALSSFPSEHFG*GWSEKG
Trigger: GCCTTTCTCACTCCATCCCCACCCAAAGTGCTCAGA...GGGGAAGCTGGAGAGGGCCCTAATGCCTACCAAGCACGGGGCATCCAAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR CCA 90 bp TCTCCAGCTTCCCCTGCTGCTGCCTGTAGCCATATCTGTCCGTTCACCCCCTATGTAGGTTGCCCTAGGTaGTGTCAGAGCAGCCACGTC +
Preference number: 2 (lower is better)
Translates to: SPASPAAACSHICPFTPYVGCPR*CQSSHV
Trigger: GACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC...ATAGGGGGTGAACGGACAGATATGGCTACAGGCAGCAGCAGGGGAAGCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR CAA 90 bp GTGCAGATGAGCAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTaGGATGCCCCGTGCTTGGTAGGCATTAGGGCCCTCTCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: VQMSSGTLGVLKLHT*DAPCLVGIRALSSF
Trigger: GAAGCTGGAGAGGGCCCTAATGCCTACCAAGCACGGGGCATCCAAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCTCATCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR GCA 90 bp CAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTGGATGCCCCGTGCTTGGTCCAGTCCTGGACCACTaGATCCACCCAGCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: QWDSGCSKTPHLGCPVLGPVLDH*IHPAGK
Trigger: CTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGG...ACCAAGCACGGGGCATCCAAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR CCA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGGGATTGGCAAGGACTaGTGGCCACCGCCAGAGAGG +
Preference number: 2 (lower is better)
Translates to: THYSERWEVLCNLLPQTWGIGKD*WPPPER
Trigger: CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCC...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR TCA 90 bp CACACCTTGGATGCCCCGTGCTTGGTAGGCATTAGGGCCCTCTCCAGCTTCCCCGTGATAGGAGAGAAGTaGGGGAGGTACATACAGTTT +
Preference number: 2 (lower is better)
Translates to: HTLDAPCLVGIRALSSFPVIGEK*GRYIQF
Trigger: AAACTGTATGTACCTCCCTCACTTCTCTCCTATCAC...GGGGAAGCTGGAGAGGGCCCTAATGCCTACCAAGCACGGGGCATCCAAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR CCA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAATTGGCAAGGACTGGTaGCCACCGCCAGAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTIGKDW*PPPERV
Trigger: AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAAT...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR CCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTGGTTCTAAGCCAGCCTaGGGGCTTTGGAAGAACAGC +
Preference number: 2 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAGSKPA*GLWKNS
Trigger: GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACC...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR TCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTTGGGGCCAGAGCGGATaGGAGATCAGCTCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPWGQSG*EISSGP
Trigger: AGGCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCA...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR CCA 90 bp CAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTGGATGCCCCGTGCTTGGTGATGCTAGGACTCTATaGGGTTCTAAGCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: QWDSGCSKTPHLGCPVLGDARTL*GSKPAW
Trigger: CCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC...ACCAAGCACGGGGCATCCAAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR GCA 90 bp TCTCCAGCTTCCCCTGCTGCTGCCTGTAGCCATATCTGTCCGTTCACCCCCTATGTAAAACAAGTAGGTTaGCCTAGGTGGTGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: SPASPAAACSHICPFTPYVKQVG*PRWCQS
Trigger: GCTCTGACACCACCTAGGGCAACCTACTTGTTTTAC...ATAGGGGGTGAACGGACAGATATGGCTACAGGCAGCAGCAGGGGAAGCTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR CCA 90 bp AACTCACGTGCAGATGAGCAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTATTGGCAAGGACTGGTaGCCACCGCCAGAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: NSRADEQWDSGCSKTPHLIGKDW*PPPERV
Trigger: AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAAT...AAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCTCATCTGCACGTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR TCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGCCAAGACTTTTCCTaGCTTTGTAACTTACAGACA +
Preference number: 2 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPSQDFS*LCNLQT
Trigger: TGTCTGTAAGTTACAAAGTCAGGAAAAGTCTTGGCT...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR GCA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCTCTGGGCCTCCTTTTaGCCCATCTGTAAAACAAGT +
Preference number: 2 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLLWASF*PICKTS
Trigger: ACTTGTTTTACAGATGGGGCAAAAGGAGGCCCAGAG...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR TCA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCGTGATAGGAGAGAAGTaGGGGAGGTACATACAGTTT +
Preference number: 2 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLVIGEK*GRYIQF
Trigger: AAACTGTATGTACCTCCCTCACTTCTCTCCTATCAC...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR CCA 72 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTaGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACA +
Preference number: 3 (lower is better)
Translates to: GFGRTALGIGKD*WPPPERVDART
Trigger: TGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR CAA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCGCCAGCCTGGGGGCTTaGGAAGAACAGCTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPASLGA*EEQLWG
Trigger: TCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGC...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR GCA 72 bp CTGGGTGTTCTAAAACTCCACACCTTGGATGCCCCGTaGTTGGTAGGCATTAGGGCCCTCTCCAGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: LGVLKLHTLDAP*LVGIRALSSFP
Trigger: GGGGAAGCTGGAGAGGGCCCTAATGCCTACCAAGCACGGGGCATCCAAGGTGTGGAGTTTTAGAACACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR CCA 72 bp CAGAGCAGCCACGTCCTCGGTGATGCTAGGACTCTATaGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAAC +
Preference number: 3 (lower is better)
Translates to: QSSHVLGDARTL*GSKPAWGLWKN
Trigger: GTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR TCA 72 bp GCTGCCTGTAGCCATATCTGTCCGTTCACCCCCTATTaGCCACCCCCGCTCCCAAAGGAAGGTTCAAGGGTA +
Preference number: 3 (lower is better)
Translates to: AACSHICPFTPY*PPPLPKEGSRV
Trigger: TACCCTTGAACCTTCCTTTGGGAGCGGGGGTGGTCAATAGGGGGTGAACGGACAGATATGGCTACAGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR-3UTR CAA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGAACAGCTCTGGGGATaGGCAAGGACTGGTGGCCAC +
Preference number: 3 (lower is better)
Translates to: THYSERWEVLCNLLPQTWEQLWG*ARTGGH
Trigger: GTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTC...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR GCA 72 bp ACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTaGAACCTTCTCCCTCAAACCTGGGCCCAGACCCCA +
Preference number: 3 (lower is better)
Translates to: THTHYSERWEVL*NLLPQTWAQTP
Trigger: TGGGGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR-3UTR CAA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCGCCAGCCTGGGGGCTTaGGAAGAACAGCTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLASLGA*EEQLWG
Trigger: TCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGC...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR GCA 72 bp AACCAACACATACACACTATTCAGAGAGGTGGGAAGTaGTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: NQHIHTIQRGGK*SATFSLKPGPR
Trigger: TCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR CCA 72 bp GCTGCTTGTCTTCTAAACTCACGTGCAGATGAGCAGTaGGACTCTGGGTGTTCTAAAACTCCACACCTTGGA +
Preference number: 3 (lower is better)
Translates to: AACLLNSRADEQ*DSGCSKTPHLG
Trigger: TCCAAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCTCATCTGCACGTGAGTTTAGAAGACAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374005.8
3UTR CCA 72 bp ATCAATAAACCAACACATACACACTATTCAGAGAGGTaGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGG +
Preference number: 3 (lower is better)
Translates to: INKPTHTHYSER*EVLCNLLPQTW
Trigger: CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTTATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCCTGCCCCGTAGCTTCTaGAGTCCCCTTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQTPVLDHCIHPAGKGSSLPRSF*SPLPGQ
Trigger: CTGGCCTGGAAGGGGACTTCAGAAGCTACGGGGCAG...GCTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGTGGTGCAGGGCGCGATaGGCAGGTTGCACAGCCCGT +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQWCRAR*AGCTAR
Trigger: ACGGGCTGTGCAACCTGCTCATCGCGCCCTGCACCA...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGCCGCAGCAGCTTCATaGCCTGCGCCTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPAAAAS*PAPPPG
Trigger: TCCTGGAGGAGGCGCAGGTCATGAAGCTGCTGCGGC...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGTGGGGCCAGAGCGGATaGGAGATCAGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQWGQSG*EISSGP
Trigger: AGGCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCA...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCTGGGGCCAGAGCGGATaGGAGATCAGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AQTPVLDHCIHPAGKGSSWGQSG*EISSGP
Trigger: AGGCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCA...GCTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTCGGGGAGAACTGGGGTaGTGCCCGCCTCTGACCGCC +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVRGELG*CPPLTA
Trigger: GGCGGTCAGAGGCGGGCAGCACCCCAGTTCTCCCCG...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR TCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGCTGCCCCGTAGCTTCTaGAGTCCCCTTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQLPRSF*SPLPGQ
Trigger: CTGGCCTGGAAGGGGACTTCAGAAGCTACGGGGCAG...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGACCGCCAGAGAGGGTTaGTGCCCGGACAGGCTATGT +
Preference number: 4 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQTAREG*CPDRLC
Trigger: ACATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGT...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGGGCAGCGGTATCCTCTaGGCAACAGGGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQGSGIL*ATGQEV
Trigger: GACCTCCTGCCCTGTTGCTCAGAGGATACCGCTGCC...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399173.5
CDS-3UTR GCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCAGGCCCCCTGGGGGTTaGCTGGTGAAAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGRPPGG*LVKAAA
Trigger: GGCAGCTGCTTTCACCAGGCAACCCCCAGGGGGCCT...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCTGCTGCCGTTCCACGTaGCCAGCCACACATCCCCGA +
Preference number: 4 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPCCRST*PATHPR
Trigger: TCGGGGATGTGTGGCTGGGCACGTGGAACGGCAGCA...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp TTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGCCGCGAGTGCCGGCGTaGGGGGAGAACTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FGRTALGIGKDWWPPPERPRVPA*GENWGA
Trigger: AGCACCCCAGTTCTCCCCGCACGCCGGCACTCGCGG...CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTTCCAGCAGCCGCGAGTaGCGGCGTGCGGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVSSSRE*RRAGRT
Trigger: AGTTCTCCCCGCACGCCGGCACTCGCGGCTGCTGGA...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGGGGATTGGCAAGGACTaGTGGCCACCGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQGIGKD*WPPPER
Trigger: CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCC...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGAGGGGTCAGAGACCTaGAGCCCAATTCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPEGSET*SPILPG
Trigger: GCCGGGCAGAATTGGGCTCCAGGTCTCTGACCCCTC...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCTTAGGCCCCTACTCCTaGGTCAGTGGGGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPLGPYS*VSGAAA
Trigger: TGCCGCAGCCCCACTGACCCAGGAGTAGGGGCCTAA...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374003.7
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGTGGTGCAGGGCGCGATaGGCAGGTTGCACAGCCCGT +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLWCRAR*AGCTAR
Trigger: ACGGGCTGTGCAACCTGCTCATCGCGCCCTGCACCA...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGCGGACAGGCTATGTCTaGTCCCCGGGCTGGTACTGT +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQRTGYV*SPGWYC
Trigger: ACAGTACCAGCCCGGGGATCAGACATAGCCTGTCCG...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCCGTTCACCCCCTATTaGCCACCCCCGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDAPFTPY*PPPLPK
Trigger: CTTTGGGAGCGGGGGTGGTCAATAGGGGGTGAACGG...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCTGCTGCCGTTCCACGTaGCCAGCCACACATCCCCGA +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDACCRST*PATHPR
Trigger: TCGGGGATGTGTGGCTGGGCACGTGGAACGGCAGCA...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCAAAGTCTGCGATCTTaGACGCCAGCCGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQQSLRS*TPAAPQ
Trigger: TTGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTG...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTTCTCCCAGGCGTCCTTaGCCAGGCCCAGCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTSPRRP*PGPASA
Trigger: CGCAGACGCTGGGCCTGGCCAAGGACGCCTGGGAGA...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCTACTCCTGGGTCAGTaGGGCTGCGGCATGATCCTT +
Preference number: 4 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQLLLGQ*GCGMIL
Trigger: AAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAG...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCAGTTTTTCCGGAGCTaGGAGACCGAGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDAQFFRS*ETEPPT
Trigger: GGTGGGAGGCTCGGTCTCTCAGCTCCGGAAAAACTG...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCCAGTTTTTCCGGAGCTaGGAGACCGAGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGQFFRS*ETEPPT
Trigger: GGTGGGAGGCTCGGTCTCTCAGCTCCGGAAAAACTG...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGGCCGCAGCAGCTTCATaGCCTGCGCCTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARAAAAS*PAPPPG
Trigger: TCCTGGAGGAGGCGCAGGTCATGAAGCTGCTGCGGC...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGATGGGGCCAGAGCGGATaGGAGATCAGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARWGQSG*EISSGP
Trigger: AGGCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCA...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGAGGGCAGGAGGTCATTaGGCAAGGGTCCCCCACACC +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLRAGGH*ARVPHT
Trigger: GGTGTGGGGGACCCTTGCTCAATGACCTCCTGCCCT...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399173.5
CDS-3UTR GCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTGGCCTCGTACAGGGATaGTGGGCAGCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTGLVQG*WAAWRA
Trigger: TGCCCTCCAGGCTGCCCAGCATCCCTGTACGAGGCC...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGCATCCTCCTTGGCCGTaGCCACCGGCTCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQHPPWP*PPAPIS
Trigger: AGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATG...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCAGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGAGGCCTTCGGGGACATaGTGCCCGGCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: AATSSVMLGLYGVLSQPGRPSGT*CPASAS
Trigger: AGACGCTGAAGCCGGGCACCATGTCCCCGAAGGCCT...CCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTAGGCCTTCGGGGACATaGTGCCCGGCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVRPSGT*CPASAS
Trigger: AGACGCTGAAGCCGGGCACCATGTCCCCGAAGGCCT...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGCCAGCCTGGGGGCTTTaGAAGAACAGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQPAWGL*KNSSGD
Trigger: ATCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGG...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCGACCAGGTCAGAAGCTaGGGCTACCAGAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: AQTPVLDHCIHPAGKGSSDQVRS*GYQSTL
Trigger: CAAGGTACTCTGGTAGCCCCAGCTTCTGACCTGGTC...GCTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399173.5
CDS-3UTR TCA 90 bp GCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCAGTCATACAGGGCAATaGACAGGGTCACCCCAATCC +
Preference number: 4 (lower is better)
Translates to: AQTPVLDHCIHPAGKGSSSHTGQ*TGSPQS
Trigger: GGATTGGGGTGACCCTGTTCATTGCCCTGTATGACT...GCTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGTGGTGCAGGGCGCGATaGGCAGGTTGCACAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKWCRAR*AGCTAR
Trigger: ACGGGCTGTGCAACCTGCTCATCGCGCCCTGCACCA...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGCGGACAGGCTATGTCTaGTCCCCGGGCTGGTACTGT +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLRTGYV*SPGWYC
Trigger: ACAGTACCAGCCCGGGGATCAGACATAGCCTGTCCG...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGCGGACAGGCTATGTCTaGTCCCCGGGCTGGTACTGT +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPERTGYV*SPGWYC
Trigger: ACAGTACCAGCCCGGGGATCAGACATAGCCTGTCCG...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGACCGCCAGAGAGGGTTaGTGCCCGGACAGGCTATGT +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPETAREG*CPDRLC
Trigger: ACATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGT...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAACCGCCAGAGAGGGTTaGTGCCCGGACAGGCTATGT +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARTAREG*CPDRLC
Trigger: ACATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGT...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp TTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGTGGGGCCAGAGCGGATaGGAGATCAGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FGRTALGIGKDWWPPPERWGQSG*EISSGP
Trigger: AGGCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCA...CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCCTGGTGAAAGCAGCTaGCTCTCTGCATCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQPGESS*LSASFL
Trigger: GAGAAAGGATGCAGAGAGGCAGCTGCTTTCACCAGG...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGCCTTCGGGGACATGGTaGCCGGCTTCAGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEPSGTW*PASASS
Trigger: TGAAGACGCTGAAGCCGGGCACCATGTCCCCGAAGG...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CACACCTTGGATGCCCCGTGCTTGGTAGGCATTAGGGCCCTCTCCAGCTTCCCCCTCAGCTACCTGGGCTaGCATGTCCACCAATTGGGG +
Preference number: 4 (lower is better)
Translates to: HTLDAPCLVGIRALSSFPLSYLG*HVHQLG
Trigger: CCCCAATTGGTGGACATGGCAGCCCAGGTAGCTGAG...GGGGAAGCTGGAGAGGGCCCTAATGCCTACCAAGCACGGGGCATCCAAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGCGCCAAGCCAAAGTCTaGGATCTTGCACGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPERQAKV*DLARQP
Trigger: CGGCTGGCGTGCAAGATCGCAGACTTTGGCTTGGCG...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCGATCCCAGTCCCGGATaGACAGGGAGTAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDADPSPG*TGSRHL
Trigger: AAGGTGCCTACTCCCTGTCCATCCGGGACTGGGATC...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGTCTCCCAGGCGTCCTTaGCCAGGCCCAGCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALSPRRP*PGPASA
Trigger: CGCAGACGCTGGGCCTGGCCAAGGACGCCTGGGAGA...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGAGGCCTTCGGGGACATaGTGCCCGGCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARRPSGT*CPASAS
Trigger: AGACGCTGAAGCCGGGCACCATGTCCCCGAAGGCCT...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGGGCAGCCTCAAATCCTaGCCCTCTGGGTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQGSLKS*PSGFLR
Trigger: TCTCAAGAACCCAGAGGGCCAGGATTTGAGGCTGCC...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGCCATGTCCACCAATTaGGGCAGCCTCAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPAMSTN*GSLKSW
Trigger: CCAGGATTTGAGGCTGCCCCAATTGGTGGACATGGC...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCGCCAGGTCTGTTCCATaGCCTCGTACAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGARSVP*PRTGML
Trigger: CAGCATCCCTGTACGAGGCCATGGAACAGACCTGGC...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCATTGGCAAGGACTGGTaGCCACCGCCAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGIGKDW*PPPERV
Trigger: AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAAT...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCACTTTGGGTGGGGATaGAGTGAGAAAGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQHFGWG*SEKGYR
Trigger: CCTGTAGCCTTTCTCACTCCATCCCCACCCAAAGTG...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCAAGGAAGCCAGGGTTaGTGGCCTGAGAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDAQGSQG*WPERRS
Trigger: ACTTCTCCTCTCAGGCCATCAACCCTGGCTTCCTTG...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCAGTCATACAGGGCAATaGACAGGGTCACCCCAATCC +
Preference number: 4 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPSHTGQ*TGSPQS
Trigger: GGATTGGGGTGACCCTGTTCATTGCCCTGTATGACT...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTTCTCGCTTTCCCGAATaGGAAAGGCCCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTSRFPE*ERPPGG
Trigger: ACCCCCAGGGGGCCTTTCTCATTCGGGAAAGCGAGA...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCACTGAACCCGTGTGGTaGTGTAGTAGCCGCCCATGT +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGTEPVW*CSSRPC
Trigger: ACATGGGCGGCTACTACATCACCACACGGGTTCAGT...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGATGGTGCAGGGCGCGATaGGCAGGTTGCACAGCCCGT +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRWCRAR*AGCTAR
Trigger: ACGGGCTGTGCAACCTGCTCATCGCGCCCTGCACCA...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGAGCTGCCGTGACACATaGACTCGGTCACGATGTAGA +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQSCRDT*TRSRCR
Trigger: TCTACATCGTGACCGAGTTCATGTGTCACGGCAGCT...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGTCCAGCAAGCTGCCGTaGCACATGAACTCGGTCACG +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPESSKLP*HMNSVT
Trigger: CGTGACCGAGTTCATGTGTCACGGCAGCTTGCTGGA...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGCGGACAGGCTATGTCTaGTCCCCGGGCTGGTACTGT +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGRTGYV*SPGWYC
Trigger: ACAGTACCAGCCCGGGGATCAGACATAGCCTGTCCG...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACCGCCAGAGAGGGTTaGTGCCCGGACAGGCTATGT +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARTAREG*CPDRLC
Trigger: ACATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGT...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCAGGCCCATAGTGGTCTaGTGCCCCGTAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDARPIVV*CPVASE
Trigger: TTCAGAAGCTACGGGGCAGCAGACCACTATGGGCCT...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGCGTAGTTGCTGGGAATaGAGCCAGTTTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQRSCWE*SQFFRS
Trigger: GCTCCGGAAAAACTGGCTGCATTCCCAGCAACTACG...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCCCTGGTGAAAGCAGCTaGCTCTCTGCATCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPPGESS*LSASFL
Trigger: GAGAAAGGATGCAGAGAGGCAGCTGCTTTCACCAGG...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTAGGCCCCCTGGGGGTTaGCTGGTGAAAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSRPPGG*LVKAAA
Trigger: GGCAGCTGCTTTCACCAGGCAACCCCCAGGGGGCCT...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGAGGCCCCCTGGGGGTTaGCTGGTGAAAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALRPPGG*LVKAAA
Trigger: GGCAGCTGCTTTCACCAGGCAACCCCCAGGGGGCCT...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGCCTTCGGGGACATGGTaGCCGGCTTCAGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGPSGTW*PASASS
Trigger: TGAAGACGCTGAAGCCGGGCACCATGTCCCCGAAGG...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp TTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGCCTTCGGGGACATGGTaGCCGGCTTCAGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FGRTALGIGKDWWPPPERPSGTW*PASASS
Trigger: TGAAGACGCTGAAGCCGGGCACCATGTCCCCGAAGG...CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGATGCACCAGCTTGTCGTaGCGCAGCAGCTTCATGACC +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARCTSLS*RSSFMT
Trigger: GGTCATGAAGCTGCTGCGGCACGACAAGCTGGTGCA...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGTGCACCAGCTTGTCGTaGCGCAGCAGCTTCATGACC +
Preference number: 4 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGCTSLS*RSSFMT
Trigger: GGTCATGAAGCTGCTGCGGCACGACAAGCTGGTGCA...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGACCCCTCAGCTACCTGGGCTaGCATGTCCACCAATTGGGG +
Preference number: 4 (lower is better)
Translates to: QRGGKCSATFSLKPGPRPLSYLG*HVHQLG
Trigger: CCCCAATTGGTGGACATGGCAGCCCAGGTAGCTGAG...GGGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGTTCCATGTAGGCCATaGCCTCAGCTACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVVPCRP*PQLPGL
Trigger: CAGCCCAGGTAGCTGAGGGCATGGCCTACATGGAAC...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGACCCGTTCCATGTAGGCCATaGCCTCAGCTACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QRGGKCSATFSLKPGPRPVPCRP*PQLPGL
Trigger: CAGCCCAGGTAGCTGAGGGCATGGCCTACATGGAAC...GGGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGCAAAGTCTGCGATCTTaGACGCCAGCCGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLQSLRS*TPAAPQ
Trigger: TTGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTG...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTCAAAGTCTGCGATCTTaGACGCCAGCCGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVQSLRS*TPAAPQ
Trigger: TTGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTG...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTCGCCAAGCCAAAGTCTaGGATCTTGCACGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTRQAKV*DLARQP
Trigger: CGGCTGGCGTGCAAGATCGCAGACTTTGGCTTGGCG...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGCCTCGTACAGGGATaGTGGGCAGCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALGLVQG*WAAWRA
Trigger: TGCCCTCCAGGCTGCCCAGCATCCCTGTACGAGGCC...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCGGCCTCGTACAGGGATaGTGGGCAGCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPGLVQG*WAAWRA
Trigger: TGCCCTCCAGGCTGCCCAGCATCCCTGTACGAGGCC...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGACCCCCAGTCCTGGACCACTaGATCCACCCAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QRGGKCSATFSLKPGPRPPVLDH*IHPAGK
Trigger: CTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGG...GGGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCCAGAGAGGTGGGAAGTaGTCTGCAACCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGQRGGK*SATFSL
Trigger: GAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCAGAGAGGTGGGAAGTaGTCTGCAACCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDAQRGGK*SATFSL
Trigger: GAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGTCCACCAGGTCCAGTTaGCTGGCTGATGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLSTRSS*LADGSV
Trigger: GACGGAACCATCAGCCAGGCAACTGGACCTGGTGGA...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS-3UTR CCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGACATCCTCCTTGGCCGTaGCCACCGGCTCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARHPPWP*PPAPIS
Trigger: AGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATG...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCAGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGATCCCAGTCCCGGATaGACAGGGAGTAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: AATSSVMLGLYGVLSQPGDPSPG*TGSRHL
Trigger: AAGGTGCCTACTCCCTGTCCATCCGGGACTGGGATC...CCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCTCACATGATCGCCTCTaGTCTGATCCCAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDASHDRL*SDPSPG
Trigger: TCCGGGACTGGGATCAGACCAGAGGCGATCATGTGA...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACATCTCCCAGGCGTCCTTaGCCAGGCCCAGCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTSPRRP*PGPASA
Trigger: CGCAGACGCTGGGCCTGGCCAAGGACGCCTGGGAGA...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCAGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGCCAGGTCTGTTCCATaGCCTCGTACAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: AATSSVMLGLYGVLSQPGARSVP*PRTGML
Trigger: CAGCATCCCTGTACGAGGCCATGGAACAGACCTGGC...CCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCTTGGAAGAACAGCTCTaGGGATTGGCAAGGACTGGT +
Preference number: 4 (lower is better)
Translates to: AQTPVLDHCIHPAGKGSSLEEQL*GLARTG
Trigger: ACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAA...GCTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTCCAGCCTGGGGGCTTTaGAAGAACAGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVPAWGL*KNSSGD
Trigger: ATCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGG...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGGTAGGTTGCCCTAGGTaGTGTCAGAGCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEVGCPR*CQSSHV
Trigger: GACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCCACTTTGGGTGGGGATaGAGTGAGAAAGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPHFGWG*SEKGYR
Trigger: CCTGTAGCCTTTCTCACTCCATCCCCACCCAAAGTG...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGCTACTCCTGGGTCAGTaGGGCTGCGGCATGATCCTT +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPELLLGQ*GCGMIL
Trigger: AAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAG...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374003.7
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCGAGCCAACCCTTTTCTaGCAGCGGTATCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGEPTLF*QRYPLS
Trigger: GCTCAGAGGATACCGCTGCCAGAAAAGGGTTGGCTC...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399173.5
CDS-3UTR TCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTCTGCCCCGTAGCTTCTaGAGTCCCCTTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDALPRSF*SPLPGQ
Trigger: CTGGCCTGGAAGGGGACTTCAGAAGCTACGGGGCAG...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGGATGTGGGCAAATaGGGATGCAGGCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALGDVGK*GCRPGL
Trigger: AAGGCCCGGCCTGCATCCTCATTTGCCCACATCCCC...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGTCCCTGACACACCCCTaGTGGTGCCACTATCAAGGA +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPESLTHP*WCHYQG
Trigger: TCCTTGATAGTGGCACCATCAGGGGTGTGTCAGGGA...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCCTCTTCAGCTTGGATTaGGTCAACAGGGGCCACGTA +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGLFSLD*VNRGHV
Trigger: TACGTGGCCCCTGTTGACTCAATCCAAGCTGAAGAG...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp TCTCCAGCTTCCCCTGCTGCTGCCTGTAGCCATATCTGTCCGTTCACCCCCTATTCTCGCTTTCCCGAATaGGAAAGGCCCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SPASPAAACSHICPFTPYSRFPE*ERPPGG
Trigger: ACCCCCAGGGGGCCTTTCTCATTCGGGAAAGCGAGA...ATAGGGGGTGAACGGACAGATATGGCTACAGGCAGCAGCAGGGGAAGCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR TCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGACTGAACCCGTGTGGTaGTGTAGTAGCCGCCCATGT +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLTEPVW*CSSRPC
Trigger: ACATGGGCGGCTACTACATCACCACACGGGTTCAGT...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGGGCCCTCTGGGTTCTTaGGAAAATCCAGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGGPLGS*ENPASC
Trigger: GCAGCTTGCTGGATTTTCTCAAGAACCCAGAGGGCC...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGGGCCCTCTGGGTTCTTaGGAAAATCCAGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEGPLGS*ENPASC
Trigger: GCAGCTTGCTGGATTTTCTCAAGAACCCAGAGGGCC...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGGCACCTGGACTAGAGTaGGATAAAAGGAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQAPGLE*DKRRVG
Trigger: TCCTACTCTCCTTTTATCTCACTCTAGTCCAGGTGC...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGCTACAGAATGGGGCATaGCTCACTCAAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLLQNGA*LTQGPL
Trigger: CAGGGGTCCTTGAGTGAGGCATGCCCCATTCTGTAG...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR GCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGACCCATAGTGGTCTGCTaGCCCGTAGCTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARPIVVC*PVASEV
Trigger: GACTTCAGAAGCTACGGGGCAGCAGACCACTATGGG...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGCAGGGGCCACGTAGTTaGTGGGAATGCAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEQGPRS*WECSQF
Trigger: AAACTGGCTGCATTCCCAGCAACTACGTGGCCCCTG...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGCAGGGGCCACGTAGTTaGTGGGAATGCAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLQGPRS*WECSQF
Trigger: AAACTGGCTGCATTCCCAGCAACTACGTGGCCCCTG...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGCGCCAAGCCAAAGTCTaGGATCTTGCACGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKRQAKV*DLARQP
Trigger: CGGCTGGCGTGCAAGATCGCAGACTTTGGCTTGGCG...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTCCAGTCCTGGACCACTaGATCCACCCAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTPVLDH*IHPAGK
Trigger: CTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGG...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCAGAGAGGTGGGAAGTaGTCTGCAACCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGQRGGK*SATFSL
Trigger: GAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACCTTGGATGCCCCGTaGTTGGTAGGCATTAGGGCC +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARTLDAP*LVGIRA
Trigger: GGCCCTAATGCCTACCAAGCACGGGGCATCCAAGGT...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGGATCCCAGTCCCGGATaGACAGGGAGTAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARDPSPG*TGSRHL
Trigger: AAGGTGCCTACTCCCTGTCCATCCGGGACTGGGATC...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGCCTTCGGGGACATaGTGCCCGGCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDARPSGT*CPASAS
Trigger: AGACGCTGAAGCCGGGCACCATGTCCCCGAAGGCCT...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGGCAGCCTCAAATCCTaGCCCTCTGGGTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARGSLKS*PSGFLR
Trigger: TCTCAAGAACCCAGAGGGCCAGGATTTGAGGCTGCC...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGCCATGTCCACCAATTaGGGCAGCCTCAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVAMSTN*GSLKSW
Trigger: CCAGGATTTGAGGCTGCCCCAATTGGTGGACATGGC...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTATGCCCTCAGCTACCTaGGCTGCCATGTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVMPSAT*AAMSTN
Trigger: ATTGGTGGACATGGCAGCCCAGGTAGCTGAGGGCAT...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTaGCCACCGCCAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGIGKDW*PPPERV
Trigger: AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAAT...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTGGGATTGGCAAGGACTaGTGGCCACCGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAGIGKD*WPPPER
Trigger: CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCC...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGGGTTCTAAGCCAGCCTaGGGGCTTTGGAAGAACAGC +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLGSKPA*GLWKNS
Trigger: GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACC...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TCTCCAGCTTCCCCTGCTGCTGCCTGTAGCCATATCTGTCCGTTCACCCCCTATCTGCGGCATGATCCTTaGGAGGGGTCAGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SPASPAAACSHICPFTPYLRHDP*EGSETW
Trigger: CCAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAG...ATAGGGGGTGAACGGACAGATATGGCTACAGGCAGCAGCAGGGGAAGCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp TTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGCTACTCCTGGGTCAGTaGGGCTGCGGCATGATCCTT +
Preference number: 4 (lower is better)
Translates to: FGRTALGIGKDWWPPPERLLLGQ*GCGMIL
Trigger: AAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAG...CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374003.7
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTCAAGGAAGCCAGGGTTaGTGGCCTGAGAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTQGSQG*WPERRS
Trigger: ACTTCTCCTCTCAGGCCATCAACCCTGGCTTCCTTG...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGAGTCATACAGGGCAATaGACAGGGTCACCCCAATCC +
Preference number: 4 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGSHTGQ*TGSPQS
Trigger: GGATTGGGGTGACCCTGTTCATTGCCCTGTATGACT...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCCAGTTTTTCCGGAGCTaGGAGACCGAGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSQFFRS*ETEPPT
Trigger: GGTGGGAGGCTCGGTCTCTCAGCTCCGGAAAAACTG...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGACTCTTCAGCTTGGATTaGGTCAACAGGGGCCACGTA +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARLFSLD*VNRGHV
Trigger: TACGTGGCCCCTGTTGACTCAATCCAAGCTGAAGAG...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTTCTCGCTTTCCCGAATaGGAAAGGCCCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDASRFPE*ERPPGG
Trigger: ACCCCCAGGGGGCCTTTCTCATTCGGGAAAGCGAGA...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CCCCTATTGACCACCCCCGCTCCCAAAGGAAGGTTCAAGGGTATTTCATGGTTTGCCGCAGCAGCTTCATaGCCTGCGCCTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLLTTPAPKGRFKGISWFAAAAS*PAPPPG
Trigger: TCCTGGAGGAGGCGCAGGTCATGAAGCTGCTGCGGC...AAACCATGAAATACCCTTGAACCTTCCTTTGGGAGCGGGGGTGGTCAATAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR TCA 90 bp GCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCGTGATAGGAGAGAAGTaGGGGAGGTACATACAGTTT +
Preference number: 4 (lower is better)
Translates to: AQTPVLDHCIHPAGKGSSVIGEK*GRYIQF
Trigger: AAACTGTATGTACCTCCCTCACTTCTCTCCTATCAC...GCTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTGTCCAGTTGCCTGGCTaGTGGTTCCGTCACATCAGT +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTVQLPG*WFRHIS
Trigger: ACTGATGTGACGGAACCATCAGCCAGGCAACTGGAC...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS-3UTR GCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCAGGACCCCTGCCAGGTaGACCACCCTGTGCACACAC +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGRTPAR*TTLCTH
Trigger: GTGTGTGCACAGGGTGGTGCACCTGGCAGGGGTCCT...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR GCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGTCACTCAAGGACCCCTaGCAGGTGCACCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALSLKDP*QVHHPV
Trigger: CACAGGGTGGTGCACCTGGCAGGGGTCCTTGAGTGA...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR GCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCCCGGCTCCAATTTCTTaGAGAACACACAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGPAPIS*RTHSPF
Trigger: GAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGG...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCCGGCTCCAATTTCTTaGAGAACACACAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDAPAPIS*RTHSPF
Trigger: GAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGG...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGCCCATAGTGGTCTGCTaGCCCGTAGCTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGPIVVC*PVASEV
Trigger: GACTTCAGAAGCTACGGGGCAGCAGACCACTATGGG...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGCGTAGTTGCTGGGAATaGAGCCAGTTTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPERSCWE*SQFFRS
Trigger: GCTCCGGAAAAACTGGCTGCATTCCCAGCAACTACG...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCGTAGTTGCTGGGAATaGAGCCAGTTTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGRSCWE*SQFFRS
Trigger: GCTCCGGAAAAACTGGCTGCATTCCCAGCAACTACG...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTCCTGGTGAAAGCAGCTaGCTCTCTGCATCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVPGESS*LSASFL
Trigger: GAGAAAGGATGCAGAGAGGCAGCTGCTTTCACCAGG...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCCCTTCGGGGACATGGTaGCCGGCTTCAGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPPSGTW*PASASS
Trigger: TGAAGACGCTGAAGCCGGGCACCATGTCCCCGAAGG...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTCTTCCCGTTTATTCATaGCTGGGTAGGGGATTCGGC +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVLPVYS*LGRGFG
Trigger: GCCGAATCCCCTACCCAGGCATGAATAAACGGGAAG...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGAGAACTGGGGTGCTaGCCGCCTCTGACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPGELGC*PPLTAA
Trigger: GGCGGCGGTCAGAGGCGGGCAGCACCCCAGTTCTCC...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGACTCCACACCTTGGATaGCCCGTGCTTGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGTPHLG*PVLGRH
Trigger: ATGCCTACCAAGCACGGGGCATCCAAGGTGTGGAGT...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTTTCCCTGCTACAGAATaGGGCATGCCTCACTCAAGG +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVFPATE*GMPHSR
Trigger: CCTTGAGTGAGGCATGCCCCATTCTGTAGCAGGGAA...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR CCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTACCACTCTTCAGCTTaGATTGAGTCAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGYHSSA*IESTGA
Trigger: GGCCCCTGTTGACTCAATCCAAGCTGAAGAGTGGTA...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTTCACATGATCGCCTCTaGTCTGATCCCAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTSHDRL*SDPSPG
Trigger: TCCGGGACTGGGATCAGACCAGAGGCGATCATGTGA...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTGGCAGCCTCAAATCCTaGCCCTCTGGGTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTGSLKS*PSGFLR
Trigger: TCTCAAGAACCCAGAGGGCCAGGATTTGAGGCTGCC...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGGCCATGTCCACCAATTaGGGCAGCCTCAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGAMSTN*GSLKSW
Trigger: CCAGGATTTGAGGCTGCCCCAATTGGTGGACATGGC...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGATGCCCTCAGCTACCTaGGCTGCCATGTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARMPSAT*AAMSTN
Trigger: ATTGGTGGACATGGCAGCCCAGGTAGCTGAGGGCAT...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGATGCCCTCAGCTACCTaGGCTGCCATGTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: FGRTALGIGKDWWPPPERMPSAT*AAMSTN
Trigger: ATTGGTGGACATGGCAGCCCAGGTAGCTGAGGGCAT...CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGGGAACTTGGAACCTTaGCAGGGGTTGTACTCATCG +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVGNLEP*QGLYSS
Trigger: CGATGAGTACAACCCCTGCCAAGGTTCCAAGTTCCC...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGATTGGCAAGGACTGGTaGCCACCGCCAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKIGKDW*PPPERV
Trigger: AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAAT...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGGATGCTAGGACTCTATaGGGTTCTAAGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGDARTL*GSKPAW
Trigger: CCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGATGAGAGATCAGCTCTaGGCCTCCTTTTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEMRDQL*ASFCPI
Trigger: GATGGGGCAAAAGGAGGCCCAGAGCTGATCTCTCAT...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCAGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGTCTGAGCACTTTGGGTaGGGATGGAGTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: AATSSVMLGLYGVLSQPGSEHFG*GWSEKG
Trigger: GCCTTTCTCACTCCATCCCCACCCAAAGTGCTCAGA...CCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCTTAGGCCCCTACTCCTaGGTCAGTGGGGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGLGPYS*VSGAAA
Trigger: TGCCGCAGCCCCACTGACCCAGGAGTAGGGGCCTAA...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374003.7
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCCTGCGGCATGATCCTTaGGAGGGGTCAGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSLRHDP*EGSETS
Trigger: GGAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAG...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399173.5
CDS-3UTR TCA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGCAAGGAAGCCAGGGTTaGTGGCCTGAGAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKQGSQG*WPERRS
Trigger: ACTTCTCCTCTCAGGCCATCAACCCTGGCTTCCTTG...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGAGTCATACAGGGCAATaGACAGGGTCACCCCAATCC +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGSHTGQ*TGSPQS
Trigger: GGATTGGGGTGACCCTGTTCATTGCCCTGTATGACT...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTTCCAGCAAGCTGCCGTaGCACATGAACTCGGTCACG +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSSSKLP*HMNSVT
Trigger: CGTGACCGAGTTCATGTGTCACGGCAGCTTGCTGGA...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTGGATGCCCCGTGCTTGGTTCCAGCAAGCTGCCGTaGCACATGAACTCGGTCACG +
Preference number: 4 (lower is better)
Translates to: QWDSGCSKTPHLGCPVLGSSKLP*HMNSVT
Trigger: CGTGACCGAGTTCATGTGTCACGGCAGCTTGCTGGA...ACCAAGCACGGGGCATCCAAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACACGCGCATGCACATaGTCATACGCTCATACAGGC +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARTRACT*SYAHTG
Trigger: GCCTGTATGAGCGTATGAGCATGTGCATGCGCGTGT...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR GCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGCCGGCTCCAATTTCTTaGAGAACACACAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEPAPIS*RTHSPF
Trigger: GAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGG...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGCCGGCTCCAATTTCTTaGAGAACACACAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLPAPIS*RTHSPF
Trigger: GAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGG...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGCCTGAGAGGAGAAGTTaGTGTAGTTGGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARPERRS*CSWGCG
Trigger: CCCACATCCCCAACTACAGCAACTTCTCCTCTCAGG...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTCCTGGTGAAAGCAGCTaGCTCTCTGCATCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTPGESS*LSASFL
Trigger: GAGAAAGGATGCAGAGAGGCAGCTGCTTTCACCAGG...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGTGCTGCCGTTCCACGTaGCCAGCCACACATCCCCGA +
Preference number: 4 (lower is better)
Translates to: THYSERWEVLCNLLPQTWCCRST*PATHPR
Trigger: TCGGGGATGTGTGGCTGGGCACGTGGAACGGCAGCA...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTTGCACCAGCTTGTCGTaGCGCAGCAGCTTCATGACC +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDACTSLS*RSSFMT
Trigger: GGTCATGAAGCTGCTGCGGCACGACAAGCTGGTGCA...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGCTCAGCTACCTGGGCTaGCATGTCCACCAATTGGGG +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALLSYLG*HVHQLG
Trigger: CCCCAATTGGTGGACATGGCAGCCCAGGTAGCTGAG...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGCTTCCCGTTTATTCATaGCTGGGTAGGGGATTCGGC +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGLPVYS*LGRGFG
Trigger: GCCGAATCCCCTACCCAGGCATGAATAAACGGGAAG...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp TTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGCTTCCCGTTTATTCATaGCTGGGTAGGGGATTCGGC +
Preference number: 4 (lower is better)
Translates to: FGRTALGIGKDWWPPPERLPVYS*LGRGFG
Trigger: GCCGAATCCCCTACCCAGGCATGAATAAACGGGAAG...CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTGTTCCGTCACATCAGTaGTTTGGTCTCCACCCTAGC +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTVPSHQ*FGLHPS
Trigger: GCTAGGGTGGAGACCAAAGCACTGATGTGACGGAAC...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS-3UTR CCA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCAGAAGTTGCTGTAGTTaGGGATGTGGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: TALGIGKDWWPPPERVDARSCCS*GCGQMR
Trigger: CCTCATTTGCCCACATCCCCAACTACAGCAACTTCT...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCAGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGTACCACTCTTCAGCTTaGATTGAGTCAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AATSSVMLGLYGVLSQPGYHSSA*IESTGA
Trigger: GGCCCCTGTTGACTCAATCCAAGCTGAAGAGTGGTA...CCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGTACCACTCTTCAGCTTaGATTGAGTCAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEYHSSA*IESTGA
Trigger: GGCCCCTGTTGACTCAATCCAAGCTGAAGAGTGGTA...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCGATCCCAGTCCCGGATaGACAGGGAGTAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSDPSPG*TGSRHL
Trigger: AAGGTGCCTACTCCCTGTCCATCCGGGACTGGGATC...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTTCTCCCAGGCGTCCTTaGCCAGGCCCAGCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPSPRRP*PGPASA
Trigger: CGCAGACGCTGGGCCTGGCCAAGGACGCCTGGGAGA...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGATGCCCTCAGCTACCTaGGCTGCCATGTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKMPSAT*AAMSTN
Trigger: ATTGGTGGACATGGCAGCCCAGGTAGCTGAGGGCAT...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGGGGAACTTGGAACCTTaGCAGGGGTTGTACTCATCG +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARGNLEP*QGLYSS
Trigger: CGATGAGTACAACCCCTGCCAAGGTTCCAAGTTCCC...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCGCCAGGTCTGTTCCATaGCCTCGTACAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPARSVP*PRTGML
Trigger: CAGCATCCCTGTACGAGGCCATGGAACAGACCTGGC...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCATTGGCAAGGACTGGTaGCCACCGCCAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSIGKDW*PPPERV
Trigger: AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAAT...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGATTGGAAGAACAGCTCTaGGGATTGGCAAGGACTGGT +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARLEEQL*GLARTG
Trigger: ACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAA...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGACCAGCCTGGGGGCTTTaGAAGAACAGCTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRPAWGL*KNSSGD
Trigger: ATCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGG...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGGGTTCTAAGCCAGCCTaGGGGCTTTGGAAGAACAGC +
Preference number: 4 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKGSKPA*GLWKNS
Trigger: GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACC...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAGTAGGTTGCCCTAGGTaGTGTCAGAGCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRVGCPR*CQSSHV
Trigger: GACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGACTATGAGAGATCAGCTCTaGGCCTCCTTTTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: VGCPRWCQSSHVLGDARTMRDQL*ASFCPI
Trigger: GATGGGGCAAAAGGAGGCCCAGAGCTGATCTCTCAT...AGTCCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGATGAGAGATCAGCTCTaGGCCTCCTTTTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGMRDQL*ASFCPI
Trigger: GATGGGGCAAAAGGAGGCCCAGAGCTGATCTCTCAT...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGTCTGAGCACTTTGGGTaGGGATGGAGTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGSEHFG*GWSEKG
Trigger: GCCTTTCTCACTCCATCCCCACCCAAAGTGCTCAGA...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
3UTR CAA 72 bp AGCAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTaGGATGCCCCGTGCTTGGTAGGCATTAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSGTLGVLKLHT*DAPCLVGIRAL
Trigger: GAGGGCCCTAATGCCTACCAAGCACGGGGCATCCAAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR TCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCCAAGGAAGCCAGGGTTaGTGGCCTGAGAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSQGSQG*WPERRS
Trigger: ACTTCTCCTCTCAGGCCATCAACCCTGGCTTCCTTG...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGATCCCTGACACACCCCTaGTGGTGCCACTATCAAGGA +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRSLTHP*WCHYQG
Trigger: TCCTTGATAGTGGCACCATCAGGGGTGTGTCAGGGA...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGTCCCTGACACACCCCTaGTGGTGCCACTATCAAGGA +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALSLTHP*WCHYQG
Trigger: TCCTTGATAGTGGCACCATCAGGGGTGTGTCAGGGA...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGCCCTCTGGGTTCTTaGGAAAATCCAGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALGPLGS*ENPASC
Trigger: GCAGCTTGCTGGATTTTCTCAAGAACCCAGAGGGCC...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCGTGATAGGAGAGAAGTaGGGGAGGTACATACAGTTT +
Preference number: 4 (lower is better)
Translates to: ATSSVMLGLYGVLSQPGGVIGEK*GRYIQF
Trigger: AAACTGTATGTACCTCCCTCACTTCTCTCCTATCAC...GCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGACCCATAGTGGTCTGCTaGCCCGTAGCTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRPIVVC*PVASEV
Trigger: GACTTCAGAAGCTACGGGGCAGCAGACCACTATGGG...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGCCCATAGTGGTCTaGTGCCCCGTAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDARPIVV*CPVASE
Trigger: TTCAGAAGCTACGGGGCAGCAGACCACTATGGGCCT...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGGCCCATAGTGGTCTaGTGCCCCGTAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPRPIVV*CPVASE
Trigger: TTCAGAAGCTACGGGGCAGCAGACCACTATGGGCCT...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCCAGGGGCCACGTAGTTaGTGGGAATGCAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSQGPRS*WECSQF
Trigger: AAACTGGCTGCATTCCCAGCAACTACGTGGCCCCTG...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGAAGCAGCTGCCTCTCTaGATCCTTTCTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGKQLPL*ILSPNL
Trigger: AAGATTGGGAGAAAGGATGCAGAGAGGCAGCTGCTT...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AACTCACGTGCAGATGAGCAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTTGCTGCCGTTCCACGTaGCCAGCCACACATCCCCGA +
Preference number: 4 (lower is better)
Translates to: NSRADEQWDSGCSKTPHLCCRST*PATHPR
Trigger: TCGGGGATGTGTGGCTGGGCACGTGGAACGGCAGCA...AAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCTCATCTGCACGTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCCTCAGCTACCTGGGCTaGCATGTCCACCAATTGGGG +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGLSYLG*HVHQLG
Trigger: CCCCAATTGGTGGACATGGCAGCCCAGGTAGCTGAG...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCGTTCCATGTAGGCCATaGCCTCAGCTACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGVPCRP*PQLPGL
Trigger: CAGCCCAGGTAGCTGAGGGCATGGCCTACATGGAAC...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGCCTCGTACAGGGATaGTGGGCAGCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPGLVQG*WAAWRA
Trigger: TGCCCTCCAGGCTGCCCAGCATCCCTGTACGAGGCC...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGTAAAACAAGTAGGTTaGCCTAGGTGGTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GRTALGIGKDWWPPPERVVKQVG*PRWCQS
Trigger: GCTCTGACACCACCTAGGGCAACCTACTTGTTTTAC...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGCTCTGGGCCTCCTTTTaGCCCATCTGTAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPELWASF*PICKTS
Trigger: ACTTGTTTTACAGATGGGGCAAAAGGAGGCCCAGAG...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACACCAGTCCTGGACCACTaGATCCACCCAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTPVLDH*IHPAGK
Trigger: CTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGG...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTGCTCATACAGGCACGTaGCTTTCCCTCTTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAAHTGT*LSLLGL
Trigger: TAGGCCCAAGAGGGAAAGCCACGTGCCTGTATGAGC...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR CCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGTCACATGATCGCCTCTaGTCTGATCCCAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALSHDRL*SDPSPG
Trigger: TCCGGGACTGGGATCAGACCAGAGGCGATCATGTGA...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGATCACATGATCGCCTCTaGTCTGATCCCAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRSHDRL*SDPSPG
Trigger: TCCGGGACTGGGATCAGACCAGAGGCGATCATGTGA...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGCCGTTTATTCATGCCTaGGTAGGGGATTCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKPFIHA*VGDSAL
Trigger: AAGGGCCGAATCCCCTACCCAGGCATGAATAAACGG...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCCAGGTCTGTTCCATaGCCTCGTACAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTARSVP*PRTGML
Trigger: CAGCATCCCTGTACGAGGCCATGGAACAGACCTGGC...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AACTCACGTGCAGATGAGCAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTGGGATTGGCAAGGACTaGTGGCCACCGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: NSRADEQWDSGCSKTPHLGIGKD*WPPPER
Trigger: CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCC...AAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCTCATCTGCACGTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAGGTTCTAAGCCAGCCTaGGGGCTTTGGAAGAACAGC +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRGSKPA*GLWKNS
Trigger: GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACC...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCGTAGGTTGCCCTAGGTaGTGTCAGAGCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGVGCPR*CQSSHV
Trigger: GACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGACACTATTCAGAGAGGTaGGAAGTGCTCTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: GLWKNSSGDWQGLVATARHYSER*EVLCNL
Trigger: AAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTG...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGACCAGGTCCAGTTGCCTaGCTGATGGTTCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRPGPVA*LMVPSH
Trigger: ATGTGACGGAACCATCAGCCAGGCAACTGGACCTGG...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCCTGCGGCATGATCCTTaGGAGGGGTCAGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGLRHDP*EGSETS
Trigger: AGAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAG...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS-3UTR TCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTCTGCCCCGTAGCTTCTaGAGTCCCCTTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPLPRSF*SPLPGQ
Trigger: CTGGCCTGGAAGGGGACTTCAGAAGCTACGGGGCAG...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp AACTCACGTGCAGATGAGCAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTCAGTTTTTCCGGAGCTaGGAGACCGAGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: NSRADEQWDSGCSKTPHLQFFRS*ETEPPT
Trigger: GGTGGGAGGCTCGGTCTCTCAGCTCCGGAAAAACTG...AAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCTCATCTGCACGTGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR TCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGACTCTTCAGCTTGGATTaGGTCAACAGGGGCCACGTA +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRLFSLD*VNRGHV
Trigger: TACGTGGCCCCTGTTGACTCAATCCAAGCTGAAGAG...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCACTGAACCCGTGTGGTaGTGTAGTAGCCGCCCATGT +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGTEPVW*CSSRPC
Trigger: ACATGGGCGGCTACTACATCACCACACGGGTTCAGT...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCGCCGCAGCAGCTTCATaGCCTGCGCCTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLAAAAS*PAPPPG
Trigger: TCCTGGAGGAGGCGCAGGTCATGAAGCTGCTGCGGC...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGCTGCCGTGACACATaGACTCGGTCACGATGTAGA +
Preference number: 4 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPSCRDT*TRSRCR
Trigger: TCTACATCGTGACCGAGTTCATGTGTCACGGCAGCT...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGGTGATAGGAGAGAAGTaGGGGAGGTACATACAGTTT +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEVIGEK*GRYIQF
Trigger: AAACTGTATGTACCTCCCTCACTTCTCTCCTATCAC...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCCCATTCCAGGTTCCCTaGTACAGAATGGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGPFQVP*YRMGHA
Trigger: GGCATGCCCCATTCTGTAGCAGGGAACCTGGAATGG...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR GCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGAAGCAGCTGCCTCTCTaGATCCTTTCTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARKQLPL*ILSPNL
Trigger: AAGATTGGGAGAAAGGATGCAGAGAGGCAGCTGCTT...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CCCCTATTGACCACCCCCGCTCCCAAAGGAAGGTTCAAGGGTATTTCATGGTTTGTTCCATGTAGGCCATaGCCTCAGCTACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLTTPAPKGRFKGISWFVPCRP*PQLPGL
Trigger: CAGCCCAGGTAGCTGAGGGCATGGCCTACATGGAAC...AAACCATGAAATACCCTTGAACCTTCCTTTGGGAGCGGGGGTGGTCAATAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGCAAAGTCTGCGATCTTaGACGCCAGCCGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: THYSERWEVLCNLLPQTWQSLRS*TPAAPQ
Trigger: TTGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTG...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGCTCTGGGCCTCCTTTTaGCCCATCTGTAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGLWASF*PICKTS
Trigger: ACTTGTTTTACAGATGGGGCAAAAGGAGGCCCAGAG...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGCTCTGGGCCTCCTTTTaGCCCATCTGTAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARLWASF*PICKTS
Trigger: ACTTGTTTTACAGATGGGGCAAAAGGAGGCCCAGAG...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCAGGTGGGAAGTGCTCTaGAACCTTCTCCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSRWEVL*NLLPQT
Trigger: GGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCT...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAAGGTGGGAAGTGCTCTaGAACCTTCTCCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRRWEVL*NLLPQT
Trigger: GGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCT...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGCATCCTCCTTGGCCGTaGCCACCGGCTCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: THYSERWEVLCNLLPQTWHPPWP*PPAPIS
Trigger: AGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATG...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGCAAATCCTGGCCCTCTaGGTTCTTGAGAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGQILAL*VLEKIQ
Trigger: CTGGATTTTCTCAAGAACCCAGAGGGCCAGGATTTG...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGGCAGCCTCAAATCCTaGCCCTCTGGGTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTGSLKS*PSGFLR
Trigger: TCTCAAGAACCCAGAGGGCCAGGATTTGAGGCTGCC...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCGCCATGTCCACCAATTaGGGCAGCCTCAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGAMSTN*GSLKSW
Trigger: CCAGGATTTGAGGCTGCCCCAATTGGTGGACATGGC...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGAACTTGGAACCTTaGCAGGGGTTGTACTCATCG +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSGNLEP*QGLYSS
Trigger: CGATGAGTACAACCCCTGCCAAGGTTCCAAGTTCCC...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCGGGAACTTGGAACCTTaGCAGGGGTTGTACTCATCG +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSGNLEP*QGLYSS
Trigger: CGATGAGTACAACCCCTGCCAAGGTTCCAAGTTCCC...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGACCGTTTATTCATGCCTaGGTAGGGGATTCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRPFIHA*VGDSAL
Trigger: AAGGGCCGAATCCCCTACCCAGGCATGAATAAACGG...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTCCGTTTATTCATGCCTaGGTAGGGGATTCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAPFIHA*VGDSAL
Trigger: AAGGGCCGAATCCCCTACCCAGGCATGAATAAACGG...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGATTGGCAAGGACTaGTGGCCACCGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPGIGKD*WPPPER
Trigger: CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCC...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGATGCTAGGACTCTATaGGGTTCTAAGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALDARTL*GSKPAW
Trigger: CCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp CCCCTATTGACCACCCCCGCTCCCAAAGGAAGGTTCAAGGGTATTTCATGGTTTGTAGGTTGCCCTAGGTaGTGTCAGAGCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: PLLTTPAPKGRFKGISWFVGCPR*CQSSHV
Trigger: GACGTGGCTGCTCTGACACCACCTAGGGCAACCTAC...AAACCATGAAATACCCTTGAACCTTCCTTTGGGAGCGGGGGTGGTCAATAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTCACTTTGGGTGGGGATaGAGTGAGAAAGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAHFGWG*SEKGYR
Trigger: CCTGTAGCCTTTCTCACTCCATCCCCACCCAAAGTG...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTTCTGAGCACTTTGGGTaGGGATGGAGTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSSEHFG*GWSEKG
Trigger: GCCTTTCTCACTCCATCCCCACCCAAAGTGCTCAGA...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCAGCTGCCGTGACACATaGACTCGGTCACGATGTAGA +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGSCRDT*TRSRCR
Trigger: TCTACATCGTGACCGAGTTCATGTGTCACGGCAGCT...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CCCCTATTGACCACCCCCGCTCCCAAAGGAAGGTTCAAGGGTATTTCATGGTTTGGCCCTCTGGGTTCTTaGGAAAATCCAGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLLTTPAPKGRFKGISWFGPLGS*ENPASC
Trigger: GCAGCTTGCTGGATTTTCTCAAGAACCCAGAGGGCC...AAACCATGAAATACCCTTGAACCTTCCTTTGGGAGCGGGGGTGGTCAATAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR TCA 90 bp CCCCTATTGACCACCCCCGCTCCCAAAGGAAGGTTCAAGGGTATTTCATGGTTTAAACTCACGTGCAGATaGGCAGTGGGACTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLLTTPAPKGRFKGISWFKLTCR*AVGLWV
Trigger: CACCCAGAGTCCCACTGCTCATCTGCACGTGAGTTT...AAACCATGAAATACCCTTGAACCTTCCTTTGGGAGCGGGGGTGGTCAATAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGCCCATAGTGGTCTGCTaGCCCGTAGCTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: THYSERWEVLCNLLPQTWPIVVC*PVASEV
Trigger: GACTTCAGAAGCTACGGGGCAGCAGACCACTATGGG...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCCCTGAGAGGAGAAGTTaGTGTAGTTGGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGPERRS*CSWGCG
Trigger: CCCACATCCCCAACTACAGCAACTTCTCCTCTCAGG...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAAGCAGCTGCCTCTCTaGATCCTTTCTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKKQLPL*ILSPNL
Trigger: AAGATTGGGAGAAAGGATGCAGAGAGGCAGCTGCTT...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTCGCCAAGCCAAAGTCTaGGATCTTGCACGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPRQAKV*DLARQP
Trigger: CGGCTGGCGTGCAAGATCGCAGACTTTGGCTTGGCG...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTTACCACTCTTCAGCTTaGATTGAGTCAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSYHSSA*IESTGA
Trigger: GGCCCCTGTTGACTCAATCCAAGCTGAAGAGTGGTA...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTTTGGAAGAACAGCTCTaGGGATTGGCAAGGACTGGT +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSLEEQL*GLARTG
Trigger: ACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAA...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGATGCTAGGACTCTATaGGGTTCTAAGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTDARTL*GSKPAW
Trigger: CCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCGATGCTAGGACTCTATaGGGTTCTAAGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGDARTL*GSKPAW
Trigger: CCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCATGAGAGATCAGCTCTaGGCCTCCTTTTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGMRDQL*ASFCPI
Trigger: GATGGGGCAAAAGGAGGCCCAGAGCTGATCTCTCAT...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTTCCAGCAAGCTGCCGTaGCACATGAACTCGGTCACG +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPSSKLP*HMNSVT
Trigger: CGTGACCGAGTTCATGTGTCACGGCAGCTTGCTGGA...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGCACCTGGACTAGAGTaGGATAAAAGGAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALAPGLE*DKRRVG
Trigger: TCCTACTCTCCTTTTATCTCACTCTAGTCCAGGTGC...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGCCAAGACTTTTCCTaGCTTTGTAACTTACAGACA +
Preference number: 4 (lower is better)
Translates to: GFGRTALGIGKDWWPPPESQDFS*LCNLQT
Trigger: TGTCTGTAAGTTACAAAGTCAGGAAAAGTCTTGGCT...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTAAGCAGCTGCCTCTCTaGATCCTTTCTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSKQLPL*ILSPNL
Trigger: AAGATTGGGAGAAAGGATGCAGAGAGGCAGCTGCTT...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTTGCACCAGCTTGTCGTaGCGCAGCAGCTTCATGACC +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPCTSLS*RSSFMT
Trigger: GGTCATGAAGCTGCTGCGGCACGACAAGCTGGTGCA...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCGTAAAACAAGTAGGTTaGCCTAGGTGGTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPVKQVG*PRWCQS
Trigger: GCTCTGACACCACCTAGGGCAACCTACTTGTTTTAC...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTCTCTGGGCCTCCTTTTaGCCCATCTGTAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSLWASF*PICKTS
Trigger: ACTTGTTTTACAGATGGGGCAAAAGGAGGCCCAGAG...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp CCCCTATTGACCACCCCCGCTCCCAAAGGAAGGTTCAAGGGTATTTCATGGTTTAGGTGGGAAGTGCTCTaGAACCTTCTCCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: PLLTTPAPKGRFKGISWFRWEVL*NLLPQT
Trigger: GGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCT...AAACCATGAAATACCCTTGAACCTTCCTTTGGGAGCGGGGGTGGTCAATAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCAGAAGTTGCTGTAGTTaGGGATGTGGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSRSCCS*GCGQMR
Trigger: CCTCATTTGCCCACATCCCCAACTACAGCAACTTCT...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCGTATTGTTCAGGATGTaGAACTTCTCGCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSVLFRM*NFSPLV
Trigger: CACCAAGGGCGAGAAGTTCCACATCCTGAACAATAC...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTGTATTGTTCAGGATGTaGAACTTCTCGCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAVLFRM*NFSPLV
Trigger: CACCAAGGGCGAGAAGTTCCACATCCTGAACAATAC...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTCAAATCCTGGCCCTCTaGGTTCTTGAGAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAQILAL*VLEKIQ
Trigger: CTGGATTTTCTCAAGAACCCAGAGGGCCAGGATTTG...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGACAAATCCTGGCCCTCTaGGTTCTTGAGAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRQILAL*VLEKIQ
Trigger: CTGGATTTTCTCAAGAACCCAGAGGGCCAGGATTTG...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCTTGGAAGAACAGCTCTaGGGATTGGCAAGGACTGGT +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGLEEQL*GLARTG
Trigger: ACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAA...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCCACTATTCAGAGAGGTaGGAAGTGCTCTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPHYSER*EVLCNL
Trigger: AAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTG...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCCGTGCAGATGAGCAGTaGGACTCTGGGTGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGRADEQ*DSGCSK
Trigger: TTTAGAACACCCAGAGTCCCACTGCTCATCTGCACG...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR TCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCGCACCTGGACTAGAGTaGGATAAAAGGAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGAPGLE*DKRRVG
Trigger: TCCTACTCTCCTTTTATCTCACTCTAGTCCAGGTGC...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AACTCACGTGCAGATGAGCAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTCCTGAGAGGAGAAGTTaGTGTAGTTGGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: NSRADEQWDSGCSKTPHLPERRS*CSWGCG
Trigger: CCCACATCCCCAACTACAGCAACTTCTCCTCTCAGG...AAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCTCATCTGCACGTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR GCA 90 bp AACTCACGTGCAGATGAGCAGTGGGACTCTGGGTGTTCTAAAACTCCACACCTTCTTCCCGTTTATTCATaGCTGGGTAGGGGATTCGGC +
Preference number: 4 (lower is better)
Translates to: NSRADEQWDSGCSKTPHLLPVYS*LGRGFG
Trigger: GCCGAATCCCCTACCCAGGCATGAATAAACGGGAAG...AAGGTGTGGAGTTTTAGAACACCCAGAGTCCCACTGCTCATCTGCACGTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CCA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAAGAAGTTGCTGTAGTTaGGGATGTGGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTRSCCS*GCGQMR
Trigger: CCTCATTTGCCCACATCCCCAACTACAGCAACTTCT...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCGTATTGTTCAGGATGTaGAACTTCTCGCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGVLFRM*NFSPLV
Trigger: CACCAAGGGCGAGAAGTTCCACATCCTGAACAATAC...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACACAAATCCTGGCCCTCTaGGTTCTTGAGAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTQILAL*VLEKIQ
Trigger: CTGGATTTTCTCAAGAACCCAGAGGGCCAGGATTTG...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCTCCCTGACACACCCCTaGTGGTGCCACTATCAAGGA +
Preference number: 4 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLSLTHP*WCHYQG
Trigger: TCCTTGATAGTGGCACCATCAGGGGTGTGTCAGGGA...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGTAAAACAAGTAGGTTaGCCTAGGTGGTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: THYSERWEVLCNLLPQTWVKQVG*PRWCQS
Trigger: GCTCTGACACCACCTAGGGCAACCTACTTGTTTTAC...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGAGAAGTTGCTGTAGTTaGGGATGTGGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: THYSERWEVLCNLLPQTWRSCCS*GCGQMR
Trigger: CCTCATTTGCCCACATCCCCAACTACAGCAACTTCT...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTCCGTTTATTCATGCCTaGGTAGGGGATTCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPPFIHA*VGDSAL
Trigger: AAGGGCCGAATCCCCTACCCAGGCATGAATAAACGG...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGCACTATTCAGAGAGGTaGGAAGTGCTCTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: THYSERWEVLCNLLPQTWHYSER*EVLCNL
Trigger: AAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTG...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTAGCCAAGACTTTTCCTaGCTTTGTAACTTACAGACA +
Preference number: 4 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSSQDFS*LCNLQT
Trigger: TGTCTGTAAGTTACAAAGTCAGGAAAAGTCTTGGCT...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTGAGAGGAGAAGTTaGTGTAGTTGGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLPERRS*CSWGCG
Trigger: CCCACATCCCCAACTACAGCAACTTCTCCTCTCAGG...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR TCA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCAGCCAAGACTTTTCCTaGCTTTGTAACTTACAGACA +
Preference number: 4 (lower is better)
Translates to: EKEEIVLGARADERSALGSQDFS*LCNLQT
Trigger: TGTCTGTAAGTTACAAAGTCAGGAAAAGTCTTGGCT...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR GCA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCGTAAAACAAGTAGGTTaGCCTAGGTGGTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLVKQVG*PRWCQS
Trigger: GCTCTGACACCACCTAGGGCAACCTACTTGTTTTAC...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CCA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCGTATTGTTCAGGATGTaGAACTTCTCGCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLVLFRM*NFSPLV
Trigger: CACCAAGGGCGAGAAGTTCCACATCCTGAACAATAC...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS CCA 90 bp GCCCATTCCAGGTTCCCTGCCCTTAGGCCCCTACTCCTGGGTCAGTaGGGCTGCGGCATGATCCTTGGGAGGGGTCAGAGACCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: AHSRFPALRPLLLGQ*GCGMILGRGQRPGA
Trigger: GGCTCCAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAGGGGCCTAAGGGCAGGGAACCTGGAATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374005.8
ENST00000475472.5
CDS CCA 90 bp GCCCATTCCAGGTTCCCTGCCCTTAGGCCCCTACTCCTGGGTCAGTaGGGCTGCGGCATGATCCTTGGGAGGGGTCAGAGACCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: AHSRFPALRPLLLGQ*GCGMILGRGQRPPE
Trigger: CTCCGGAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAGGGGCCTAAGGGCAGGGAACCTGGAATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
CDS-3UTR CAA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGAGGCCAGCATCCTCCTaGGCCGTGGCCACCGGCTCC +
Preference number: 5 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLRPASS*AVATGS
Trigger: GGAGCCGGTGGCCACGGCCAAGGAGGATGCTGGCCT...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GCAGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGAGGCCAGCATCCTCCTaGGCCGTGGCCACCGGCTCC +
Preference number: 5 (lower is better)
Translates to: AATSSVMLGLYGVLSQPGRPASS*AVATGS
Trigger: GGAGCCGGTGGCCACGGCCAAGGAGGATGCTGGCCT...CCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCGGCGCGATGAGCAGGTaGCACAGCCCGTCATTCACC +
Preference number: 5 (lower is better)
Translates to: AQTPVLDHCIHPAGKGSSGAMSR*HSPSFT
Trigger: GGTGAATGACGGGCTGTGCAACCTGCTCATCGCGCC...GCTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGGCCAGCCTGGGGGCTTaGGAAGAACAGCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQASLGA*EEQLWG
Trigger: TCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGC...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGGGCGCGATGAGCAGGTaGCACAGCCCGTCATTCACC +
Preference number: 5 (lower is better)
Translates to: WGLARTGGHRQRGLMPGQGAMSR*HSPSFT
Trigger: GGTGAATGACGGGCTGTGCAACCTGCTCATCGCGCC...CTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGGAACAGCTCTGGGGATaGGCAAGGACTGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQEQLWG*ARTGGH
Trigger: GTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTC...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS TCA 90 bp AGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTaGTGCCCGGACAGGCTATGTCTGATCCCCGGGCTGGTACTGTGG +
Preference number: 5 (lower is better)
Translates to: SSGDWQGLVATAREG*CPDRLCLIPGLVLW
Trigger: CCACAGTACCAGCCCGGGGATCAGACATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS CCA 90 bp GCCCATTCCAGGTTCCCTGCCCTTAGGCCCCTACTCCTGGGTCAGTaGGGCTGCGGCATGATCCTTGGGAGGGGTCAGAGACCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: AHSRFPALRPLLLGQ*GCGMILGRGQRPLP
Trigger: TGGAAGAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAGGGGCCTAAGGGCAGGGAACCTGGAATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS-3UTR CAA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAAGGCCCCCTGGGGGTaGCCTGGTGAAAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEKAPWG*PGESSC
Trigger: GCAGCTGCTTTCACCAGGCAACCCCCAGGGGGCCTT...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCCAAAGTCTGCGATCTaGCACGCCAGCCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TALGIGKDWWPPPERVDAPKSAI*HASRSP
Trigger: TGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTGG...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CACACCTTGGATGCCCCGTGCTTGGTAGGCATTAGGGCCCTCTCCAGCTTCCCCGCCAGCCTGGGGGCTTaGGAAGAACAGCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HTLDAPCLVGIRALSSFPASLGA*EEQLWG
Trigger: TCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGC...GGGGAAGCTGGAGAGGGCCCTAATGCCTACCAAGCACGGGGCATCCAAGGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CAA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCAGGGCAGGAGGTCATaGAGCAAGGGTCCCCCACAC +
Preference number: 5 (lower is better)
Translates to: TALGIGKDWWPPPERVDAQGRRS*SKGPPH
Trigger: GTGTGGGGGACCCTTGCTCAATGACCTCCTGCCCTG...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399173.5
CDS CCA 90 bp CAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTaGTGGCCACCGCCAGAGAGGGTTGATGCCCGGACAGGCTATGTC +
Preference number: 5 (lower is better)
Translates to: QPGGFGRTALGIGKD*WPPPERVDARTGYV
Trigger: GACATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGAGGCCAGCATCCTCCTaGGCCGTGGCCACCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALRPASS*AVATGS
Trigger: GGAGCCGGTGGCCACGGCCAAGGAGGATGCTGGCCT...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCTGGAACTTCTCGCCCTaGGTGAAGGTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: AQTPVLDHCIHPAGKGSSWNFSP*VKVRSS
Trigger: GGATGACCTCACCTTCACCAAGGGCGAGAAGTTCCA...GCTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGGGCGCGATGAGCAGGTaGCACAGCCCGTCATTCACC +
Preference number: 5 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLGAMSR*HSPSFT
Trigger: GGTGAATGACGGGCTGTGCAACCTGCTCATCGCGCC...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp ACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCTACAGCTGCACCAGCTaGTCGTGCCGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TALGIGKDWWPPPERVDAYSCTS*SCRSSF
Trigger: GAAGCTGCTGCGGCACGACAAGCTGGTGCAGCTGTA...GGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGTCCCCAACCAGGATGTaGGCTGCCCTCAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: FGRTALGIGKDWWPPPERSPTRM*AALRSR
Trigger: CCGCGACCTGAGGGCAGCCAACATCCTGGTTGGGGA...CCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGACACCGCCAGAGAGGGTaGATGCCCGGACAGGCTATG +
Preference number: 5 (lower is better)
Translates to: GLWKNSSGDWQGLVATARHRQRG*MPGQAM
Trigger: CATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGTG...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCAAGGTCTGAGCACTTaGGGTGGGGATGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQQGLST*GGDGVR
Trigger: TCTCACTCCATCCCCACCCAAAGTGCTCAGACCTTG...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAAGGCCAGCATCCTCCTaGGCCGTGGCCACCGGCTCC +
Preference number: 5 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTRPASS*AVATGS
Trigger: GGAGCCGGTGGCCACGGCCAAGGAGGATGCTGGCCT...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGGGCGCGATGAGCAGGTaGCACAGCCCGTCATTCACC +
Preference number: 5 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGGAMSR*HSPSFT
Trigger: GGTGAATGACGGGCTGTGCAACCTGCTCATCGCGCC...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGCACCGCCAGAGAGGGTaGATGCCCGGACAGGCTATG +
Preference number: 5 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARHRQRG*MPGQAM
Trigger: CATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGTG...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGGAACAGCTCTGGGGATaGGCAAGGACTGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GFGRTALGIGKDWWPPPEEQLWG*ARTGGH
Trigger: GTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTC...CTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGCCCAGACCCCAGTCCTGGACCACTGCATCCACCCAGCAGGAAAGGGGTCCAGCTAAAACTCCACACCTaGGATGCCCCGTGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: GPDPSPGPLHPPSRKGVQLKLHT*DAPCLV
Trigger: TACCAAGCACGGGGCATCCAAGGTGTGGAGTTTTAG...CTGGACCCCTTTCCTGCTGGGTGGATGCAGTGGTCCAGGACTGGGGTCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS GCA 90 bp CCAGGCCAGCATCCTCCTTGGCCGTGGCCACCGGCTCCAATTTCTTaGAGAACACACAGCCCATTCCAGGTTCCCTGCTACAGAATGGGG +
Preference number: 5 (lower is better)
Translates to: PGQHPPWPWPPAPIS*RTHSPFQVPCYRMG
Trigger: CCCCATTCTGTAGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATGCTGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR CAA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAAGGCCCCCTGGGGGTaGCCTGGTGAAAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAKAPWG*PGESSC
Trigger: GCAGCTGCTTTCACCAGGCAACCCCCAGGGGGCCTT...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGTACAGCTGCACCAGCTaGTCGTGCCGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARYSCTS*SCRSSF
Trigger: GAAGCTGCTGCGGCACGACAAGCTGGTGCAGCTGTA...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCTGGCCCTCTGGGTTCTaGAGAAAATCCAGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPWPSGF*RKSSKL
Trigger: CAGCTTGCTGGATTTTCTCAAGAACCCAGAGGGCCA...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTTCCCCAACCAGGATGTaGGCTGCCCTCAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: ARTLWGSKPAWGLWKNSSSPTRM*AALRSR
Trigger: CCGCGACCTGAGGGCAGCCAACATCCTGGTTGGGGA...AGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGATCCCCAACCAGGATGTaGGCTGCCCTCAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRSPTRM*AALRSR
Trigger: CCGCGACCTGAGGGCAGCCAACATCCTGGTTGGGGA...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGGAACAGCTCTGGGGATaGGCAAGGACTGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGEQLWG*ARTGGH
Trigger: GTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTC...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGGCCAGCCTGGGGGCTTaGGAAGAACAGCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKASLGA*EEQLWG
Trigger: TCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGC...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS TCA 90 bp GATGGCCTGAGAGGAGAAGTTGCTGTAGTTGGGGATGTGGGCAAATaGGGATGCAGGCCGGGCCTTAGTGGGGTCAGGCCCATAGTGGTC +
Preference number: 5 (lower is better)
Translates to: DGLRGEVAVVGDVGK*GCRPGLSGVRPIVV
Trigger: GACCACTATGGGCCTGACCCCACTAAGGCCCGGCCTGCATCCTCATTTGCCCACATCCCCAACTACAGCAACTTCTCCTCTCAGGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
ENST00000475472.5
CDS-3UTR CAA 90 bp CAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGACCCTGGAACTTCTCGCCCTaGGTGAAGGTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: QRGGKCSATFSLKPGPRPWNFSP*VKVRSS
Trigger: GGATGACCTCACCTTCACCAAGGGCGAGAAGTTCCA...GGGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCAAGGCCCCCTGGGGGTaGCCTGGTGAAAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: EKEEIVLGARADERSALGKAPWG*PGESSC
Trigger: GCAGCTGCTTTCACCAGGCAACCCCCAGGGGGCCTT...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAAAGGCCCCCTGGGGGTaGCCTGGTGAAAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTKAPWG*PGESSC
Trigger: GCAGCTGCTTTCACCAGGCAACCCCCAGGGGGCCTT...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGTGCCATGTCCACCAATaGGGGCAGCCTCAAATCCTG +
Preference number: 5 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGCHVHQ*GQPQIL
Trigger: CAGGATTTGAGGCTGCCCCAATTGGTGGACATGGCA...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGCCAAAGTCTGCGATCTaGCACGCCAGCCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALPKSAI*HASRSP
Trigger: TGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTGG...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGGGGGAACTTGGAACCTaGGCAGGGGTTGTACTCATC +
Preference number: 5 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLGELGT*AGVVLI
Trigger: GATGAGTACAACCCCTGCCAAGGTTCCAAGTTCCCC...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGCACTTGATGGGGAACTaGGAACCTTGGCAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLHLMGN*EPWQGL
Trigger: CAACCCCTGCCAAGGTTCCAAGTTCCCCATCAAGTG...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCACTTGATGGGGAACTaGGAACCTTGGCAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGHLMGN*EPWQGL
Trigger: CAACCCCTGCCAAGGTTCCAAGTTCCCCATCAAGTG...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTCACCGCCAGAGAGGGTaGATGCCCGGACAGGCTATG +
Preference number: 5 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAHRQRG*MPGQAM
Trigger: CATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGTG...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAGCCAGCCTGGGGGCTTaGGAAGAACAGCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRASLGA*EEQLWG
Trigger: TCCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGC...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGCGTCACATCAGTGCTTaGGTCTCCACCCTAGCCCCA +
Preference number: 5 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARRHISA*VSTLAP
Trigger: TGGGGCTAGGGTGGAGACCAAAGCACTGATGTGACG...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS GCA 90 bp CCGGCTCCAATTTCTTGCAGAACACACAGCCCATTCCAGGTTCCCTaGTACAGAATGGGGCATGCCTCACTCAAGGACCCCTGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: PAPISCRTHSPFQVP*YRMGHASLKDPCQV
Trigger: CACCTGGCAGGGGTCCTTGAGTGAGGCATGCCCCATTCTGTAGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR CAA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTACAGCTGCACCAGCTaGTCGTGCCGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSYSCTS*SCRSSF
Trigger: GAAGCTGCTGCGGCACGACAAGCTGGTGCAGCTGTA...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGATACAGCTGCACCAGCTaGTCGTGCCGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRYSCTS*SCRSSF
Trigger: GAAGCTGCTGCGGCACGACAAGCTGGTGCAGCTGTA...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGTGGCCCTCTGGGTTCTaGAGAAAATCCAGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLWPSGF*RKSSKL
Trigger: CAGCTTGCTGGATTTTCTCAAGAACCCAGAGGGCCA...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCCCAAAGTCTGCGATCTaGCACGCCAGCCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: EKEEIVLGARADERSALGPKSAI*HASRSP
Trigger: TGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTGG...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACACCAAAGTCTGCGATCTaGCACGCCAGCCGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTPKSAI*HASRSP
Trigger: TGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTGG...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTTTGTACTCATCGTCCTaGATGAGACGCGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: GRTALGIGKDWWPPPERVLYSSS*MRRAKP
Trigger: TGGCTTGGCGCGTCTCATCAAGGACGATGAGTACAA...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGGCTTTGGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAACCTTGGCAGGGGTaGTACTCATCGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: GLWKNSSGDWQGLVATAREPWQG*YSSSLM
Trigger: CATCAAGGACGATGAGTACAACCCCTGCCAAGGTTC...TCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCCAAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGGAACCTTGGCAGGGGTaGTACTCATCGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: EEQLWGLARTGGHRQRGLEPWQG*YSSSLM
Trigger: CATCAAGGACGATGAGTACAACCCCTGCCAAGGTTC...CAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCCACCGCCAGAGAGGGTaGATGCCCGGACAGGCTATG +
Preference number: 5 (lower is better)
Translates to: EKEEIVLGARADERSALGHRQRG*MPGQAM
Trigger: CATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGTG...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAGAACAGCTCTGGGGATaGGCAAGGACTGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGREQLWG*ARTGGH
Trigger: GTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTC...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTAGGCAAGGTCTGAGCACTTaGGGTGGGGATGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: QVGCPRWCQSSHVLGDARQGLST*GGDGVR
Trigger: TCTCACTCCATCCCCACCCAAAGTGCTCAGACCTTG...CCTAGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCTCCGTTCACCCCCTATaGACCACCCCCGCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPSVHPL*TTPAPK
Trigger: TTTGGGAGCGGGGGTGGTCAATAGGGGGTGAACGGA...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CAA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCACGTGGCTTTCCCTCTaGGGCCTAGATTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSTWLSL*GLDWGP
Trigger: AGGACCCCAATCTAGGCCCAAGAGGGAAAGCCACGT...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS-3UTR CAA 90 bp AGCCACGTCCTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGACCGGCTCCAATTTCTaGCAGAACACACAGCCCATT +
Preference number: 5 (lower is better)
Translates to: SHVLGDARTLWGSKPAWGTGSNF*QNTQPI
Trigger: AATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGT...CCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAGGACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGACCCACCGGCTCCAATTTCTaGCAGAACACACAGCCCATT +
Preference number: 5 (lower is better)
Translates to: QRGGKCSATFSLKPGPRPTGSNF*QNTQPI
Trigger: AATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGT...GGGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTGATGCCCCAGTCACCTTCAGTATaGTTCAGGATGTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: QLWGLARTGGHRQRGLMPQSPSV*FRMWNF
Trigger: GAAGTTCCACATCCTGAACAATACTGAAGGTGACTG...GGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGTGCCATGTCCACCAATaGGGGCAGCCTCAAATCCTG +
Preference number: 5 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKCHVHQ*GQPQIL
Trigger: CAGGATTTGAGGCTGCCCCAATTGGTGGACATGGCA...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CTCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGGGGGAACTTGGAACCTaGGCAGGGGTTGTACTCATC +
Preference number: 5 (lower is better)
Translates to: LGDARTLWGSKPAWGLWKGELGT*AGVVLI
Trigger: GATGAGTACAACCCCTGCCAAGGTTCCAAGTTCCCC...CTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TCTCCAGCTTCCCCTGCTGCTGCCTGTAGCCATATCTGTCCGTTCACCCCCTATCACTTGATGGGGAACTaGGAACCTTGGCAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SPASPAAACSHICPFTPYHLMGN*EPWQGL
Trigger: CAACCCCTGCCAAGGTTCCAAGTTCCCCATCAAGTG...ATAGGGGGTGAACGGACAGATATGGCTACAGGCAGCAGCAGGGGAAGCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CAA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACATTGGATGCCCCGTGCTaGGTAGGCATTAGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTLDAPC*VGIRAL
Trigger: GAGGGCCCTAATGCCTACCAAGCACGGGGCATCCAA...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS TCA 90 bp TCTTCCAGAAAGTCTTCCTGGATCCACCAGGTCCAGTTGCCTGGCTaGTGGTTCCGTCACATCAGTGCTTTGGTCTCCACCCTAGCCCCA +
Preference number: 5 (lower is better)
Translates to: SSRKSSWIHQVQLPG*WFRHISALVSTLAP
Trigger: TGGGGCTAGGGTGGAGACCAAAGCACTGATGTGACGGAACCATCAGCCAGGCAACTGGACCTGGTGGATCCAGGAAGACTTTCTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS CCA 90 bp GACCTCTTCCAGAAAGTCTTCCTGGATCCACCAGGTCCAGTTGCCTaGCTGATGGTTCCGTCACATCAGTGCTTTGGTCTCCACCCTAGC +
Preference number: 5 (lower is better)
Translates to: DLFQKVFLDPPGPVA*LMVPSHQCFGLHPS
Trigger: GCTAGGGTGGAGACCAAAGCACTGATGTGACGGAACCATCAGCCAGGCAACTGGACCTGGTGGATCCAGGAAGACTTTCTGGAAGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS-3UTR CAA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTTGGAACTTCTCGCCCTaGGTGAAGGTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDAWNFSP*VKVRSS
Trigger: GGATGACCTCACCTTCACCAAGGGCGAGAAGTTCCA...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAGGGGAACTTGGAACCTaGGCAGGGGTTGTACTCATC +
Preference number: 5 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRGELGT*AGVVLI
Trigger: GATGAGTACAACCCCTGCCAAGGTTCCAAGTTCCCC...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCCAAGGTCTGAGCACTTaGGGTGGGGATGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: DARTLWGSKPAWGLWKNSQGLST*GGDGVR
Trigger: TCTCACTCCATCCCCACCCAAAGTGCTCAGACCTTG...GCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGGCTACCAGAGTACCTaGGGAAGCCCCACAATGAGC +
Preference number: 5 (lower is better)
Translates to: VMLGLYGVLSQPGGFGRTGYQST*GSPTMS
Trigger: GCTCATTGTGGGGCTTCCCAAGGTACTCTGGTAGCC...TGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399173.5
CDS-3UTR CAA 90 bp GGAAGAACAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTTCAGTCACCTTCAGTATaGTTCAGGATGTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: GRTALGIGKDWWPPPERVQSPSV*FRMWNF
Trigger: GAAGTTCCACATCCTGAACAATACTGAAGGTGACTG...AACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTGTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCAGACCCCAGTCACCTTCAGTATaGTTCAGGATGTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: QRGGKCSATFSLKPGPRPQSPSV*FRMWNF
Trigger: GAAGTTCCACATCCTGAACAATACTGAAGGTGACTG...GGGTCTGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCTGGCCCTCTGGGTTCTaGAGAAAATCCAGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPWPSGF*RKSSKL
Trigger: CAGCTTGCTGGATTTTCTCAAGAACCCAGAGGGCCA...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCTGCCATGTCCACCAATaGGGGCAGCCTCAAATCCTG +
Preference number: 5 (lower is better)
Translates to: EKEEIVLGARADERSALGCHVHQ*GQPQIL
Trigger: CAGGATTTGAGGCTGCCCCAATTGGTGGACATGGCA...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp AAACCAACACATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCTCCCCAACCAGGATGTaGGCTGCCCTCAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: KPTHTHYSERWEVLCNLLSPTRM*AALRSR
Trigger: CCGCGACCTGAGGGCAGCCAACATCCTGGTTGGGGA...GAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTATGTGTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp TCGGTGATGCTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGATTGTACTCATCGTCCTaGATGAGACGCGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: SVMLGLYGVLSQPGGFGRLYSSS*MRRAKP
Trigger: TGGCTTGGCGCGTCTCATCAAGGACGATGAGTACAA...TCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAGCATCACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGTTGTACTCATCGTCCTaGATGAGACGCGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALLYSSS*MRRAKP
Trigger: TGGCTTGGCGCGTCTCATCAAGGACGATGAGTACAA...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp ACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGGCCCTTGTACTCATCGTCCTaGATGAGACGCGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: TIQRGGKCSATFSLKPGPLYSSS*MRRAKP
Trigger: TGGCTTGGCGCGTCTCATCAAGGACGATGAGTACAA...GGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGAACCTTGGCAGGGGTaGTACTCATCGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALEPWQG*YSSSLM
Trigger: CATCAAGGACGATGAGTACAACCCCTGCCAAGGTTC...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GAAAAGGAAGAAATAGTGCTTGGGGCCAGAGCGGATGAGAGATCAGCTCTGGGCGGGGAACTTGGAACCTaGGCAGGGGTTGTACTCATC +
Preference number: 5 (lower is better)
Translates to: EKEEIVLGARADERSALGGELGT*AGVVLI
Trigger: GATGAGTACAACCCCTGCCAAGGTTCCAAGTTCCCC...GCCCAGAGCTGATCTCTCATCCGCTCTGGCCCCAAGCACTATTTCTTCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS CCA 90 bp AGCCCATGTGATCTTGAAAGCGGGGTTGTATCTGCCACATCCTCCTaGAGGCTCCTAAGGGCAAGTTCGCATCTCTTCTTCTTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: SPCDLESGVVSATSS*RLLRASSHLFFFPQ
Trigger: CTGAGGGAAGAAGAAGAGATGCGAACTTGCCCTTAGGAGCCTCCAGGAGGATGTGGCAGATACAACCCCGCTTTCAAGATCACATGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468038.1
ENST00000475472.5
CDS-3UTR CAA 90 bp CTAGGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGACCGGCTCCAATTTCTaGCAGAACACACAGCCCATT +
Preference number: 5 (lower is better)
Translates to: LGLYGVLSQPGGFGRTALTGSNF*QNTQPI
Trigger: AATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGT...CAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGCAGTCACCTTCAGTATaGTTCAGGATGTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGQSPSV*FRMWNF
Trigger: GAAGTTCCACATCCTGAACAATACTGAAGGTGACTG...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp ACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGGTGCCATGTCCACCAATaGGGGCAGCCTCAAATCCTG +
Preference number: 5 (lower is better)
Translates to: THYSERWEVLCNLLPQTWCHVHQ*GQPQIL
Trigger: CAGGATTTGAGGCTGCCCCAATTGGTGGACATGGCA...CCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp GGACTCTATGGGGTTCTAAGCCAGCCTGGGGGCTTTGGAAGAACAGCTCTGGGGTGTATCTTCAGCTGCTaGTCTTCTAAACTCACGTGC +
Preference number: 5 (lower is better)
Translates to: GLYGVLSQPGGFGRTALGCIFSC*SSKLTC
Trigger: GCACGTGAGTTTAGAAGACAAGCAGCTGAAGATACA...CCCCAGAGCTGTTCTTCCAAAGCCCCCAGGCTGGCTTAGAACCCCATAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CAA 90 bp AAACAAGTAGGTTGCCCTAGGTGGTGTCAGAGCAGCCACGTCCTCGGTGATGCTACCCTGCCAGAAACATaGCCATTGCAACACTCAGAG +
Preference number: 5 (lower is better)
Translates to: KQVGCPRWCQSSHVLGDATLPET*PLQHSE
Trigger: CTCTGAGTGTTGCAATGGCAATGTTTCTGGCAGGGT...AGCATCACCGAGGACGTGGCTGCTCTGACACCACCTAGGGCAACCTACTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399173.5
CDS-3UTR CAA 90 bp CCCCTATTGACCACCCCCGCTCCCAAAGGAAGGTTCAAGGGTATTTCATGGTTTACCGGCTCCAATTTCTaGCAGAACACACAGCCCATT +
Preference number: 5 (lower is better)
Translates to: PLLTTPAPKGRFKGISWFTGSNF*QNTQPI
Trigger: AATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGT...AAACCATGAAATACCCTTGAACCTTCCTTTGGGAGCGGGGGTGGTCAATAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374005.8
CDS-3UTR CAA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTTGGAACTTCTCGCCCTaGGTGAAGGTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPWNFSP*VKVRSS
Trigger: GGATGACCTCACCTTCACCAAGGGCGAGAAGTTCCA...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS-3UTR CAA 90 bp ATACACACTATTCAGAGAGGTGGGAAGTGCTCTGCAACCTTCTCCCTCAAACCTGAACCTTGGCAGGGGTaGTACTCATCGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: IHTIQRGGKCSATFSLKPEPWQG*YSSSLM
Trigger: CATCAAGGACGATGAGTACAACCCCTGCCAAGGTTC...AGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGAATAGTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS CCA 72 bp GCCTCTCCTCCGGGTCCAGACGCCAGGTCTGTTCCATaGCCTCGTACAGGGATGCTGGGCAGCCTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: ASPPGPDARSVP*PRTGMLGSLEG
Trigger: GCCCTCCAGGCTGCCCAGCATCCCTGTACGAGGCCATGGAACAGACCTGGCGTCTGGACCCGGAGGAGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS GCA 72 bp CCGGGCCTTAGTGGGGTCAGGCCCATAGTGGTCTGCTaGCCCGTAGCTTCTGAAGTCCCCTTCCAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PGLSGVRPIVVC*PVASEVPFQAS
Trigger: GCTGGCCTGGAAGGGGACTTCAGAAGCTACGGGGCAGCAGACCACTATGGGCCTGACCCCACTAAGGCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
ENST00000475472.5
CDS GCA 72 bp CAGACGCCAGGTCTGTTCCATGGCCTCGTACAGGGATaGTGGGCAGCCTGGAGGGCACGGCATGTGGTAGCC +
Preference number: 6 (lower is better)
Translates to: QTPGLFHGLVQG*WAAWRARHVVA
Trigger: GGCTACCACATGCCGTGCCCTCCAGGCTGCCCAGCATCCCTGTACGAGGCCATGGAACAGACCTGGCGTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS TCA 72 bp GGTCAGGCCCATAGTGGTCTGCTGCCCCGTAGCTTCTaGAGTCCCCTTCCAGGCCAGCATCCTCCTTGGCCG +
Preference number: 6 (lower is better)
Translates to: GQAHSGLLPRSF*SPLPGQHPPWP
Trigger: CGGCCAAGGAGGATGCTGGCCTGGAAGGGGACTTCAGAAGCTACGGGGCAGCAGACCACTATGGGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
ENST00000475472.5
CDS CCA 72 bp CCTACTCCTGGGTCAGTGGGGCTGCGGCATGATCCTTaGGAGGGGTCAGAGACCTGGAGCCCAATTCTGCCC +
Preference number: 6 (lower is better)
Translates to: PTPGSVGLRHDP*EGSETWSPILP
Trigger: GGGCAGAATTGGGCTCCAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374005.8
ENST00000475472.5
CDS CCA 72 bp AGGTTCCCTGCCCTTAGGCCCCTACTCCTGGGTCAGTaGGGCTGCGGCATGATCCTTGGGAGGGGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: RFPALRPLLLGQ*GCGMILGRGQR
Trigger: TCTCTGACCCCTCCCAAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAGGGGCCTAAGGGCAGGGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374003.7
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
ENST00000475472.5
CDS CCA 72 bp CCTACTCCTGGGTCAGTGGGGCTGCGGCATGATCCTTaGGAGGGGTCAGAGACCTCCGGAGCTCTCCTCCTA +
Preference number: 6 (lower is better)
Translates to: PTPGSVGLRHDP*EGSETSGALLL
Trigger: TAGGAGGAGAGCTCCGGAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
CDS CAA 72 bp GGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTaGATGCCCGGACAGGCTATGTCTGATCCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: GLARTGGHRQRG*MPGQAMSDPRA
Trigger: AGCCCGGGGATCAGACATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS CAA 90 bp CAGCTCTGGGGATTGGCAAGGACTGGTGGCCACCGCCAGAGAGGGTaGATGCCCGGACAGGCTATGTCTGATCCCCGGGCTGGTACTGTG +
Preference number: 6 (lower is better)
Translates to: QLWGLARTGGHRQRG*MPGQAMSDPRAGTV
Trigger: CACAGTACCAGCCCGGGGATCAGACATAGCCTGTCCGGGCATCAACCCTCTCTGGCGGTGGCCACCAGTCCTTGCCAATCCCCAGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS CAA 90 bp TCCAGGCCAGCATCCTCCTTGGCCGTGGCCACCGGCTCCAATTTCTaGCAGAACACACAGCCCATTCCAGGTTCCCTGCCCTTAGGCCCC +
Preference number: 6 (lower is better)
Translates to: SRPASSLAVATGSNF*QNTQPIPGSLPLGP
Trigger: GGGGCCTAAGGGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATGCTGGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374003.7
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
ENST00000475472.5
CDS TCA 72 bp CCAGGCAGCTCCTGCCTCCGACCCCTTGGACTCACCTaGCACACCCCTGATGGTGCCACTATCAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: PGSSCLRPLGLT*HTPDGATIKEA
Trigger: GGCTTCCTTGATAGTGGCACCATCAGGGGTGTGTCAGGTGAGTCCAAGGGGTCGGAGGCAGGAGCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468038.1
ENST00000475472.5
CDS GCA 72 bp CAGCCCATTCCAGGTTCCCTGCTACAGAATGGGGCATaGCTCACTCAAGGACCCCTGCCAGGTGCACCACCC +
Preference number: 6 (lower is better)
Translates to: QPIPGSLLQNGA*LTQGPLPGAPP
Trigger: GGGTGGTGCACCTGGCAGGGGTCCTTGAGTGAGGCATGCCCCATTCTGTAGCAGGGAACCTGGAATGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS GCA 72 bp GGTCCAGTTGCCTGGCTGATGGTTCCGTCACATCAGTaGTTTGGTCTCCACCCTAGCCCCACCTGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: GPVAWLMVPSHQ*FGLHPSPTCPS
Trigger: AGAGGGGCAGGTGGGGCTAGGGTGGAGACCAAAGCACTGATGTGACGGAACCATCAGCCAGGCAACTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS CAA 72 bp GCATCCTCCTTGGCCGTGGCCACCGGCTCCAATTTCTaGCAGAACACACAGCCCATTCCAGGTTCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: ASSLAVATGSNF*QNTQPIPGSLP
Trigger: GGGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374003.7
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
ENST00000475472.5
CDS TCA 72 bp AGAGGAGAAGTTGCTGTAGTTGGGGATGTGGGCAAATaGGGATGCAGGCCGGGCCTTAGTGGGGTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RGEVAVVGDVGK*GCRPGLSGVRP
Trigger: GGGCCTGACCCCACTAAGGCCCGGCCTGCATCCTCATTTGCCCACATCCCCAACTACAGCAACTTCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
ENST00000475472.5
CDS GCA 72 bp CTCATCGTCCTTGATGAGACGCGCCAAGCCAAAGTCTaGGATCTTGCACGCCAGCCGCTCCCCAACCAGGAT +
Preference number: 6 (lower is better)
Translates to: LIVLDETRQAKV*DLARQPLPNQD
Trigger: ATCCTGGTTGGGGAGCGGCTGGCGTGCAAGATCGCAGACTTTGGCTTGGCGCGTCTCATCAAGGACGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS GCA 72 bp CATCCTCCTTGGCCGTGGCCACCGGCTCCAATTTCTTaGAGAACACACAGCCCATTCCAGGTTCCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: HPPWPWPPAPIS*RTHSPFQVPCP
Trigger: AGGGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374003.7
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
ENST00000468038.1
ENST00000475472.5
CDS CCA 72 bp CGCGCATGCACATGCTCATACGCTCATACAGGCACGTaGCTTTCCCTCTTGGGCCTAGATTGGGGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: RACTCSYAHTGT*LSLLGLDWGPP
Trigger: GGGAGGACCCCAATCTAGGCCCAAGAGGGAAAGCCACGTGCCTGTATGAGCGTATGAGCATGTGCATGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS CCA 72 bp ATGCCCTCAGCTACCTGGGCTGCCATGTCCACCAATTaGGGCAGCCTCAAATCCTGGCCCTCTGGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: MPSATWAAMSTN*GSLKSWPSGFL
Trigger: CAAGAACCCAGAGGGCCAGGATTTGAGGCTGCCCCAATTGGTGGACATGGCAGCCCAGGTAGCTGAGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS CCA 72 bp CCTACTCCTGGGTCAGTGGGGCTGCGGCATGATCCTTaGGAGGGGTCAGAGACCTCTTCCAGAAAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: PTPGSVGLRHDP*EGSETSSRKSS
Trigger: GGAAGACTTTCTGGAAGAGGTCTCTGACCCCTCCCAAGGATCATGCCGCAGCCCCACTGACCCAGGAGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS CAA 72 bp CATGCCCTCAGCTACCTGGGCTGCCATGTCCACCAATaGGGGCAGCCTCAAATCCTGGCCCTCTGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: HALSYLGCHVHQ*GQPQILALWVL
Trigger: AAGAACCCAGAGGGCCAGGATTTGAGGCTGCCCCAATTGGTGGACATGGCAGCCCAGGTAGCTGAGGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
CDS CAA 90 bp TCCAGGCCAGCATCCTCCTTGGCCGTGGCCACCGGCTCCAATTTCTaGCAGAACACACAGCCCATTCCAGGTTCCCTGCTACAGAATGGG +
Preference number: 6 (lower is better)
Translates to: SRPASSLAVATGSNF*QNTQPIPGSLLQNG
Trigger: CCCATTCTGTAGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATGCTGGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS GCA 72 bp CATCCTCCTTGGCCGTGGCCACCGGCTCCAATTTCTTaGAGAACACACAGCCCATTCCAGGTTCCCTGCTAC +
Preference number: 6 (lower is better)
Translates to: HPPWPWPPAPIS*RTHSPFQVPCY
Trigger: GTAGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS CAA 72 bp GCATCCTCCTTGGCCGTGGCCACCGGCTCCAATTTCTaGCAGAACACACAGCCCATTCCAGGTTCCCTGCTA +
Preference number: 6 (lower is better)
Translates to: ASSLAVATGSNF*QNTQPIPGSLL
Trigger: TAGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAATTGGAGCCGGTGGCCACGGCCAAGGAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS CCA 72 bp TCACATGATCGCCTCTGGTCTGATCCCAGTCCCGGATaGACAGGGAGTAGGCACCTTTGGTGGTCTCGCTTT +
Preference number: 6 (lower is better)
Translates to: SHDRLWSDPSPG*TGSRHLWWSRF
Trigger: AAAGCGAGACCACCAAAGGTGCCTACTCCCTGTCCATCCGGGACTGGGATCAGACCAGAGGCGATCATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5
CDS CAA 72 bp GGGAGGGCTGTACAGACTCCCTCAGCCCATGTGATCTaGAAAGCGGGGTTGTATCTGCCACATCCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: GRAVQTPSAHVI*KAGLYLPHPPG
Trigger: TCCAGGAGGATGTGGCAGATACAACCCCGCTTTCAAGATCACATGGGCTGAGGGAGTCTGTACAGCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468038.1
ENST00000475472.5
CDS TCA 72 bp AAGTCTTCCTGGATCCACCAGGTCCAGTTGCCTGGCTaGTGGTTCCGTCACATCAGTGCTTTGGTCTCCACC +
Preference number: 6 (lower is better)
Translates to: KSSWIHQVQLPG*WFRHISALVST
Trigger: GGTGGAGACCAAAGCACTGATGTGACGGAACCATCAGCCAGGCAACTGGACCTGGTGGATCCAGGAAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS GCA 72 bp ATTTCTTGCAGAACACACAGCCCATTCCAGGTTCCCTaGTACAGAATGGGGCATGCCTCACTCAAGGACCCC +
Preference number: 6 (lower is better)
Translates to: ISCRTHSPFQVP*YRMGHASLKDP
Trigger: GGGGTCCTTGAGTGAGGCATGCCCCATTCTGTAGCAGGGAACCTGGAATGGGCTGTGTGTTCTGCAAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374004.5
CDS CCA 72 bp CAGAAAGTCTTCCTGGATCCACCAGGTCCAGTTGCCTaGCTGATGGTTCCGTCACATCAGTGCTTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: QKVFLDPPGPVA*LMVPSHQCFGL
Trigger: GAGACCAAAGCACTGATGTGACGGAACCATCAGCCAGGCAACTGGACCTGGTGGATCCAGGAAGACTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374003.7
CDS CCA 72 bp GATCTTGAAAGCGGGGTTGTATCTGCCACATCCTCCTaGAGGCTCCTAAGGGCAAGTTCGCATCTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: DLESGVVSATSS*RLLRASSHLFF
Trigger: GAAGAAGAGATGCGAACTTGCCCTTAGGAGCCTCCAGGAGGATGTGGCAGATACAACCCCGCTTTCAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468038.1
ENST00000475472.5
CDS CAA 72 bp CCTTCAGTATTGTTCAGGATGTGGAACTTCTCGCCCTaGGTGAAGGTGAGGTCATCCTCAGTTCGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: PSVLFRMWNFSP*VKVRSSSVRAS
Trigger: TGAGGCTCGAACTGAGGATGACCTCACCTTCACCAAGGGCGAGAAGTTCCACATCCTGAACAATACTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374003.7
ENST00000374004.5
ENST00000374005.8
ENST00000399173.5
ENST00000457296.5