Pregenerated sensors for FGG (Homo sapiens)
Ensembl gene IDs: ENSG00000171557Ensembl transcript IDs: ENST00000336098.8, ENST00000393846.6, ENST00000404648.7, ENST00000405164.5, ENST00000407946.5, ENST00000443553.5, ENST00000464532.5, ENST00000465336.1, ENST00000465913.1, ENST00000473393.5, ENST00000484695.1, ENST00000492082.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAATTGTCCCTTTATGTAAGCTCCTGGGATAGCCAGGACTGCAAATaGCTGGAGCTGATCACGGGGCCTCCTTACCAGAAGGGTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLSLYVSSWDSQDCK*LELITGPPYQKGGQ Trigger: CTGCCCACCCTTCTGGTAAGGAGGCCCCGTGATCAGCTCCAGCCATTTGCAGTCCTGGCTATCCCAGGAGCTTACATAAAGGGACAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS CCA 90 bp | GCACTGTCACCTCTCAGGCTCCAATTGTCCCTTTATGTAAGCTCCTaGGATAGCCAGGACTGCAAATGGCTGGAGCTGATCACGGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALSPLRLQLSLYVSS*DSQDCKWLELITGP Trigger: AGGCCCCGTGATCAGCTCCAGCCATTTGCAGTCCTGGCTATCCCAGGAGCTTACATAAAGGGACAATTGGAGCCTGAGAGGTGACAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS GCA 90 bp | AGGCTCCAATTGTCCCTTTATGTAAGCTCCTGGGATAGCCAGGACTaGAAATGGCTGGAGCTGATCACGGGGCCTCCTTACCAGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RLQLSLYVSSWDSQD*KWLELITGPPYQKG Trigger: ACCCTTCTGGTAAGGAGGCCCCGTGATCAGCTCCAGCCATTTGCAGTCCTGGCTATCCCAGGAGCTTACATAAAGGGACAATTGGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS TCA 90 bp | CATAGAAGTAGAGAATTAAATTCCGGGGGTGCAAGGACCAACTCATaGTGTCTGAGTGCCCGGAGCTCCGAGCCTTGTAGTGTCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: HRSRELNSGGARTNS*CLSARSSEPCSVST Trigger: AGTGCTGACACTACAAGGCTCGGAGCTCCGGGCACTCAGACATCATGAGTTGGTCCTTGCACCCCCGGAATTTAATTCTCTACTTCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000464532.5 ENST00000465336.1 ENST00000492082.5 |
||
| CDS GCA 90 bp | AGAGAAGGAGAATCGACTTTTACTTTCCCAGTGATATCATGGATTTaGACCGTGTCTTTGCAAGGTTCCTGGCACTGTGCTTCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: REGESTFTFPVISWI*TVSLQGSWHCASSW Trigger: CCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGTAAAAGTCGATTCTCCTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000405164.5 ENST00000407946.5 |
||
| CDS GCA 90 bp | GATATCATGGATTTGCACCGTGTCTTTGCAAGGTTCCTGGCACTGTaGTTCAAGCTGGGCTACCTTCTCTTTCAGGTTAACAATCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DIMDLHRVFARFLAL*FKLGYLLFQVNNLL Trigger: CAAAAGATTGTTAACCTGAAAGAGAAGGTAGCCCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000336098.8 ENST00000393846.6 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000443553.5 ENST00000464532.5 ENST00000492082.5 |
||
| CDS TCA 90 bp | TCCACTCTTAATGCATATGGGATGGCAGACTGTGTGCTTATCAAATaGATCTTCTCATTTCCCAGCCAAAATTCTGTTGTGCCAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: STLNAYGMADCVLIK*IFSFPSQNSVVPVG Trigger: TCCTACTGGCACAACAGAATTTTGGCTGGGAAATGAGAAGATTCATTTGATAAGCACACAGTCTGCCATCCCATATGCATTAAGAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS GCA 90 bp | CAGTTGCCTTCAAACTTATCATTGTCATTGTCCCAGGTACTGAACTaGATGCCATTATGGGATGTGAAAAACTTGTCACTAGGATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: QLPSNLSLSLSQVLN*MPLWDVKNLSLGSS Trigger: CGATGATCCTAGTGACAAGTTTTTCACATCCCATAATGGCATGCAGTTCAGTACCTGGGACAATGACAATGATAAGTTTGAAGGCAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS GCA 90 bp | AGTCTTCCAGTTCCACTCTTAATGCATATGGGATGGCAGACTGTGTaGTTATCAAATGAATCTTCTCATTTCCCAGCCAAAATTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPVPLLMHMGWQTV*LSNESSHFPAKILL Trigger: CAACAGAATTTTGGCTGGGAAATGAGAAGATTCATTTGATAAGCACACAGTCTGCCATCCCATATGCATTAAGAGTGGAACTGGAAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS CCA 90 bp | AACTTATCATTGTCATTGTCCCAGGTACTGAACTGCATGCCATTATaGGATGTGAAAAACTTGTCACTAGGATCATCGCCAAAATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NLSLSLSQVLNCMPL*DVKNLSLGSSPKSK Trigger: CTTTGATTTTGGCGATGATCCTAGTGACAAGTTTTTCACATCCCATAATGGCATGCAGTTCAGTACCTGGGACAATGACAATGATAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS TCA 90 bp | GAGACAGATGTCCAAATCCTTCTTTATATTGAATCCAGTTTTTCTTaGAATCTACACTGCCATCAAGTCTCTTCTGAAACACAGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ETDVQILLYIESSFS*NLHCHQVSSETQSI Trigger: GATGGACTGTGTTTCAGAAGAGACTTGATGGCAGTGTAGATTTCAAGAAAAACTGGATTCAATATAAAGAAGGATTTGGACATCTGTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS GCA 90 bp | TTTGCAATATTTGCCACACTTAGTCTCTCAAGACATGTTTCTTCCTaGTCCACATTCAATATAATTTACTTTAGGAGCCAAAATCCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: FAIFATLSLSRHVSS*STFNIIYFRSQNPY Trigger: GTAAGGATTTTGGCTCCTAAAGTAAATTATATTGAATGTGGAGCAGGAAGAAACATGTCTTGAGAGACTAAGTGTGGCAAATATTGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473393.5 |
||
| CDS TCA 72 bp | GCTCCTGGGATAGCCAGGACTGCAAATGGCTGGAGCTaGTCACGGGGCCTCCTTACCAGAAGGGTGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APGIARTANGWS*SRGLLTRRVGR Trigger: CCTGCCCACCCTTCTGGTAAGGAGGCCCCGTGATCAGCTCCAGCCATTTGCAGTCCTGGCTATCCCAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS GCA 72 bp | TTGTCCCTTTATGTAAGCTCCTGGGATAGCCAGGACTaGAAATGGCTGGAGCTGATCACGGGGCCTCCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LSLYVSSWDSQD*KWLELITGPPY Trigger: GTAAGGAGGCCCCGTGATCAGCTCCAGCCATTTGCAGTCCTGGCTATCCCAGGAGCTTACATAAAGGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS CCA 72 bp | CTTTATGTAAGCTCCTGGGATAGCCAGGACTGCAAATaGCTGGAGCTGATCACGGGGCCTCCTTACCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LYVSSWDSQDCK*LELITGPPYQK Trigger: CTTCTGGTAAGGAGGCCCCGTGATCAGCTCCAGCCATTTGCAGTCCTGGCTATCCCAGGAGCTTACATAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS CAA 90 bp | GCTCCGAGCCTTGTAGTGTCAGCACTGTCACCTCTCAGGCTCCAATaGTCCCTTTATGTAAGCTCCTGGGATAGCCAGGACTGCAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: APSLVVSALSPLRLQ*SLYVSSWDSQDCKW Trigger: CCATTTGCAGTCCTGGCTATCCCAGGAGCTTACATAAAGGGACAATTGGAGCCTGAGAGGTGACAGTGCTGACACTACAAGGCTCGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS TCA 72 bp | AGAGAATTAAATTCCGGGGGTGCAAGGACCAACTCATaGTGTCTGAGTGCCCGGAGCTCCGAGCCTTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RELNSGGARTNS*CLSARSSEPCS Trigger: ACTACAAGGCTCGGAGCTCCGGGCACTCAGACATCATGAGTTGGTCCTTGCACCCCCGGAATTTAATTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000464532.5 ENST00000465336.1 ENST00000492082.5 |
||
| CDS CCA 72 bp | GGTGGGCAGGTCTTTCCCGTTCCTTTTTCCTCATCCTaGCCCCCAACCTATACTGTCAGGTTCCCAGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: GGQVFPVPFSSS*PPTYTVRFPDF Trigger: AAAATCTGGGAACCTGACAGTATAGGTTGGGGGCCAGGATGAGGAAAAAGGAACGGGAAAGACCTGCCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000404648.7 ENST00000443553.5 |
||
| CDS CCA 72 bp | CCTCTCAGGCTCCAATTGTCCCTTTATGTAAGCTCCTaGGATAGCCAGGACTGCAAATGGCTGGAGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: PLRLQLSLYVSS*DSQDCKWLELI Trigger: GATCAGCTCCAGCCATTTGCAGTCCTGGCTATCCCAGGAGCTTACATAAAGGGACAATTGGAGCCTGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS CAA 72 bp | CTTGTAGTGTCAGCACTGTCACCTCTCAGGCTCCAATaGTCCCTTTATGTAAGCTCCTGGGATAGCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVVSALSPLRLQ*SLYVSSWDSQD Trigger: GTCCTGGCTATCCCAGGAGCTTACATAAAGGGACAATTGGAGCCTGAGAGGTGACAGTGCTGACACTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404648.7 |
||
| CDS CAA 72 bp | CCTTTCCCAGTGATATCATGGATTTGCACCGTGTCTTaGCAAGGTTCCTGGCACTGTGCTTCAAGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PFPVISWICTVS*QGSWHCASSWA Trigger: AGCCCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464532.5 ENST00000492082.5 |
||
| CDS GCA 72 bp | GATTTGCACCGTGTCTTTGCAAGGTTCCTGGCACTGTaGTTCAAGCTGGGCTACCTTCTCTTTCAGGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: DLHRVFARFLAL*FKLGYLLFQVN Trigger: GTTAACCTGAAAGAGAAGGTAGCCCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000336098.8 ENST00000393846.6 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000443553.5 ENST00000464532.5 ENST00000492082.5 |
||
| CDS CAA 72 bp | TCTTTCCCAGTGATATCATGGATTTGCACCGTGTCTTaGCAAGGTTCCTGGCACTGTGCTTCAAGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SFPVISWICTVS*QGSWHCASSWA Trigger: AGCCCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000336098.8 ENST00000393846.6 ENST00000404648.7 ENST00000443553.5 |
||
| CDS CAA 72 bp | ACTTTCCCAGTGATATCATGGATTTGCACCGTGTCTTaGCAAGGTTCCTGGCACTGTGCTTCAAGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TFPVISWICTVS*QGSWHCASSWA Trigger: AGCCCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000405164.5 ENST00000407946.5 |
||
| CDS CAA 90 bp | CATCAGTTACCTTTCCCAGTGATATCATGGATTTGCACCGTGTCTTaGCAAGGTTCCTGGCACTGTGCTTCAAGCTGGGCTACCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HQLPFPVISWICTVS*QGSWHCASSWATFS Trigger: AGAGAAGGTAGCCCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGGTAACTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464532.5 ENST00000492082.5 |
||
| CDS CCA 72 bp | ATATCATGGATTTGCACCGTGTCTTTGCAAGGTTCCTaGCACTGTGCTTCAAGCTGGGCTACCTTCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISWICTVSLQGS*HCASSWATFSF Trigger: GAAAGAGAAGGTAGCCCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000336098.8 ENST00000393846.6 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000443553.5 ENST00000464532.5 ENST00000492082.5 |
||
| CDS CAA 72 bp | CCTTCATCAGTTACCTTTCCCAGTGATATCATGGATTaGCACCGTGTCTTTGCAAGGTTCCTGGCACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSVTFPSDIMD*HRVFARFLALC Trigger: GCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGGTAACTGATGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464532.5 ENST00000492082.5 |
||
| CDS CAA 90 bp | TCGACTTTTACTTTCCCAGTGATATCATGGATTTGCACCGTGTCTTaGCAAGGTTCCTGGCACTGTGCTTCAAGCTGGGCTACCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: STFTFPVISWICTVS*QGSWHCASSWATFS Trigger: AGAGAAGGTAGCCCAGCTTGAAGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGTAAAAGTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000405164.5 ENST00000407946.5 |
||
| CDS TCA 72 bp | CCTATACTGTCAGGTTCCCAGATTTTGCACACAGGTTaGAGCTCCTCCTTTTTGGCCCAGCTCAAGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PILSGSQILHTG*SSSFLAQLKVF Trigger: AAAAACCTTGAGCTGGGCCAAAAAGGAGGAGCTTCAACCTGTGTGCAAAATCTGGGAACCTGACAGTATAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443553.5 |
||
| CDS GCA 72 bp | CTTCATCAGTTACCTTTCCCAGTGATATCATGGATTTaGACCGTGTCTTTGCAAGGTTCCTGGCACTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LHQLPFPVISWI*TVSLQGSWHCA Trigger: AGCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGGTAACTGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464532.5 ENST00000492082.5 |
||
| CDS CAA 72 bp | ACCTATACTGTCAGGTTCCCAGATTTTGCACACAGGTaGAAGCTCCTCCTTTTTGGCCCAGCTCAAGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TYTVRFPDFAHR*KLLLFGPAQGF Trigger: AAAACCTTGAGCTGGGCCAAAAAGGAGGAGCTTCAACCTGTGTGCAAAATCTGGGAACCTGACAGTATAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443553.5 |
||
| CDS CAA 90 bp | CAACCAGATCCATCCTGTTCAGCACAGTTGCCTTCAAACTTATCATaGTCATTGTCCCAGGTACTGAACTGCATGCCATTATGGGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: QPDPSCSAQLPSNLS*SLSQVLNCMPLWDV Trigger: CACATCCCATAATGGCATGCAGTTCAGTACCTGGGACAATGACAATGATAAGTTTGAAGGCAACTGTGCTGAACAGGATGGATCTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS CAA 72 bp | AATGTCTTGACAATCTTTCCCAGTGATATCATGGATTaGCACCGTGTCTTTGCAAGGTTCCTGGCACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: NVLTIFPSDIMD*HRVFARFLALC Trigger: GCACAGTGCCAGGAACCTTGCAAAGACACGGTGCAAATCCATGATATCACTGGGAAAGATTGTCAAGACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000336098.8 ENST00000393846.6 ENST00000404648.7 ENST00000443553.5 |
||
| CDS CCA 72 bp | TTGTCATTGTCCCAGGTACTGAACTGCATGCCATTATaGGATGTGAAAAACTTGTCACTAGGATCATCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLSQVLNCMPL*DVKNLSLGSSP Trigger: TGGCGATGATCCTAGTGACAAGTTTTTCACATCCCATAATGGCATGCAGTTCAGTACCTGGGACAATGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS CAA 90 bp | TTGTCCCAGGTACTGAACTGCATGCCATTATGGGATGTGAAAAACTaGTCACTAGGATCATCGCCAAAATCAAAGCCATCAAAGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LSQVLNCMPLWDVKN*SLGSSPKSKPSKAS Trigger: AGATGCCTTTGATGGCTTTGATTTTGGCGATGATCCTAGTGACAAGTTTTTCACATCCCATAATGGCATGCAGTTCAGTACCTGGGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS GCA 72 bp | CTTGTCTACTTTGGTTTGATAAGTAGACAGGAAATCTaGAATGCCACAGGTAGTTGGACAATAACTACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVYFGLISRQEI*NATGSWTITTL Trigger: CAGGGTAGTTATTGTCCAACTACCTGTGGCATTGCAGATTTCCTGTCTACTTATCAAACCAAAGTAGACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465336.1 ENST00000492082.5 |
||
| CDS CAA 72 bp | GTACTGAACTGCATGCCATTATGGGATGTGAAAAACTaGTCACTAGGATCATCGCCAAAATCAAAGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: VLNCMPLWDVKN*SLGSSPKSKPS Trigger: TGATGGCTTTGATTTTGGCGATGATCCTAGTGACAAGTTTTTCACATCCCATAATGGCATGCAGTTCAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS GCA 72 bp | CTTGTCTACTTTGGTTTGATAAGTAGACAGGAAATCTaGAATGCCACAGGTAGTTGGACAATAACTACCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LVYFGLISRQEI*NATGSWTITTE Trigger: TTCGGTAGTTATTGTCCAACTACCTGTGGCATTGCAGATTTCCTGTCTACTTATCAAACCAAAGTAGACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000336098.8 ENST00000393846.6 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000464532.5 ENST00000473393.5 ENST00000484695.1 |
||
| CDS GCA 72 bp | TCAAACTTATCATTGTCATTGTCCCAGGTACTGAACTaGATGCCATTATGGGATGTGAAAAACTTGTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: SNLSLSLSQVLN*MPLWDVKNLSL Trigger: TAGTGACAAGTTTTTCACATCCCATAATGGCATGCAGTTCAGTACCTGGGACAATGACAATGATAAGTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS CAA 90 bp | TTCTGTTGTGCCAGTAGGAGACAGATGTCCAAATCCTTCTTTATATaGAATCCAGTTTTTCTTGAAATCTACACTGCCATCAAGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FCCASRRQMSKSFFI*NPVFLEIYTAIKSL Trigger: AAGAGACTTGATGGCAGTGTAGATTTCAAGAAAAACTGGATTCAATATAAAGAAGGATTTGGACATCTGTCTCCTACTGGCACAACAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS TCA 72 bp | AATGCCATTATCATAACCATTAGGAGTAGATGCTTTTaGGTAAGTGCCACCTTGGTAATAAACTCCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NAIIITIRSRCF*VSATLVINSIE Trigger: CTCAATGGAGTTTATTACCAAGGTGGCACTTACTCAAAAGCATCTACTCCTAATGGTTATGATAATGGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||
| CDS GCA 72 bp | TTTGCCACACTTAGTCTCTCAAGACATGTTTCTTCCTaGTCCACATTCAATATAATTTACTTTAGGAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FATLSLSRHVSS*STFNIIYFRSQ Trigger: TTGGCTCCTAAAGTAAATTATATTGAATGTGGAGCAGGAAGAAACATGTCTTGAGAGACTAAGTGTGGCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473393.5 |
||
| CDS CAA 72 bp | AAACTACTTACGAATCTTTCATCTAAGATGCAGCAGTaGTCTCTGGTAGCAACATATGCTACACATGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: KLLTNLSSKMQQ*SLVATYATHVE Trigger: TTCAACATGTGTAGCATATGTTGCTACCAGAGACAACTGCTGCATCTTAGATGAAAGATTCGTAAGTAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465336.1 ENST00000492082.5 |
||
| CDS TCA 72 bp | GTCCAAATCCTTCTTTATATTGAATCCAGTTTTTCTTaGAATCTACACTGCCATCAAGTCTCTTCTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: VQILLYIESSFS*NLHCHQVSSET Trigger: TGTTTCAGAAGAGACTTGATGGCAGTGTAGATTTCAAGAAAAACTGGATTCAATATAAAGAAGGATTTGGAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000336098.8 ENST00000404648.7 ENST00000405164.5 ENST00000407946.5 ENST00000465913.1 ENST00000492082.5 |
||