RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGFR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000160867

Ensembl transcript IDs: ENST00000292408.9, ENST00000393637.5, ENST00000393648.6, ENST00000426612.5, ENST00000430285.5, ENST00000483872.2, ENST00000502906.5, ENST00000503708.5, ENST00000507708.1, ENST00000508139.1, ENST00000509511.5, ENST00000510911.5, ENST00000511076.1, ENST00000513166.1, ENST00000513423.1, ENST00000514472.1

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCGGCCCCTCCAGCCCCGTACACGGCCAGCAGGTGCCAGGCGACTaGCCTCCTTGTACCAGTGGCCACCACGCTCAGCCCGCCCACAGC +
Preference number: 1 (lower is better)
Translates to: GGPSSPVHGQQVPGD*PPCTSGHHAQPAHS
Trigger: GCTGTGGGCGGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGGCAGTCGCCTGGCACCTGCTGGCCGTGTACGGGGCTGGAGGGGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR CCA 90 bp GCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTaGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGC +
Preference number: 1 (lower is better)
Translates to: APRARARPLDTAQQL*ARGPMLSRSSTVSG
Trigger: GCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR TCA 90 bp GGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTaGCATTTGGGCCATCAGGACACAGGCACGGCAGCTCCAAGGGCA +
Preference number: 1 (lower is better)
Translates to: GMGTKRQGPRSRAEP*HLGHQDTGTAAPRA
Trigger: TGCCCTTGGAGCTGCCGTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR GCA 90 bp GCCTGCAGCTGGACAGCGGAACTTGACGGTGTTCCCCGCAGGTACTaGATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCAGTAGGG +
Preference number: 1 (lower is better)
Translates to: ACSWTAELDGVPRRY*MQFLLHALGVCPVG
Trigger: CCCTACTGGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAGCTGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR CCA 90 bp GGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTaGGCCATCAGGACACAGGCACGGCAGCTCCAAGGGCAAGGGCAC +
Preference number: 1 (lower is better)
Translates to: GLSAKVQEAEQNPDI*AIRTQARQLQGQGH
Trigger: GTGCCCTTGCCCTTGGAGCTGCCGTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR CAA 90 bp CATCAGGACACAGGCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTaGGACACGGCACAGCAACTCTGGGCCAGGGGCCCCATGCTATCA +
Preference number: 2 (lower is better)
Translates to: HQDTGTAAPRARARP*DTAQQLWARGPMLS
Trigger: TGATAGCATGGGGCCCCTGGCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGCCTGTGTCCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR-3UTR CCA 90 bp CAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGCAGCCAGCCAAACCCGGGATaGGGACTAAGCGCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: QLLWAQGPMLPSRRWGSSQPNPG*GLSAKV
Trigger: GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG...GCTGCTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
3UTR-3UTR CCA 90 bp AGGGTGCTTGCTGGGGGTAACTGTGCCTATTCGAGGGGTCCCTATGGGACTTGGCCCTCCTTGTACCAGTaGCCACCACGCTCAGCCCGC +
Preference number: 2 (lower is better)
Translates to: RVLAGGNCAYSRGPYGTWPSLYQ*PPRSAR
Trigger: GCGGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGG...CCAAGTCCCATAGGGACCCCTCGAATAGGCACAGTTACCCCCAGCAAGCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR-3UTR GCA 90 bp CCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCAGTAGGCAGGTGCCAGGCGACTaGCCTCCTTGTACCAGTGGC +
Preference number: 2 (lower is better)
Translates to: PQVLHAVSSPCAGGVSSRQVPGD*PPCTSG
Trigger: GCCACTGGTACAAGGAGGGCAGTCGCCTGGCACCTG...CCTACTGGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR-3UTR CCA 90 bp GGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCCAGCCAAACCCGGGATaGGGACTAAGCGCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: GGSEAQNLLLVLGGRRFSQPNPG*GLSAKV
Trigger: GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG...GCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR-3UTR GCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCCTATGTaGCTGCACAGCCTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQGHQPM*LHSLEP
Trigger: AGGCTCAAGGCTGTGCAGGCACATAGGCTGGTGGCC...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
3UTR-3UTR GCA 90 bp GGACAGCGGAACTTGACGGTGTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCGATCATGGAGCCTCGTaGCAGGCAGAGGTAGCGGCC +
Preference number: 2 (lower is better)
Translates to: GQRNLTVFPAGTACSFFSDHGAS*QAEVAA
Trigger: GGCCGCTACCTCTGCCTGGCACGAGGCTCCATGATC...GGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCAAGTTCCGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR-3UTR CCA 90 bp GGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCCAAGGGCACGGCCCTTaGACACGGCACAGCAACTCT +
Preference number: 2 (lower is better)
Translates to: GLSAKVQEAEQNPDIWAIQGHGP*TRHSNS
Trigger: AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTG...GATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR-3UTR CCA 90 bp GTAATCAAGGTGAGATTCTGCAGGACGATCATGGAGCCTCGTGCCAGGCAGAGGCCTCAGGTAGGAAGCTaGCAATCTCTAGGCGGCCCC +
Preference number: 2 (lower is better)
Translates to: VIKVRFCRTIMEPRARQRPQVGS*QSLGGP
Trigger: GGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGG...CCTCTGCCTGGCACGAGGCTCCATGATCGTCCTGCAGAATCTCACCTTGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR-3UTR CCA 90 bp CCGAATGCCTCCAATGCGGTTCTCCCCATGAAAGGCCTGTCCATCCTTAAGCCAGGGGTTGCCTGCAGCTaGACAGCGGAACTTGACGGT +
Preference number: 2 (lower is better)
Translates to: PNASNAVLPMKGLSILKPGVACS*TAELDG
Trigger: ACCGTCAAGTTCCGCTGTCCAGCTGCAGGCAACCCC...TGGCTTAAGGATGGACAGGCCTTTCATGGGGAGAACCGCATTGGAGGCATTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR-3UTR CCA 90 bp ACGGTGTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGTGTCCTCATCATCGTTGCTaGAGGTCAAGGAGTCACCTG +
Preference number: 2 (lower is better)
Translates to: TVFPAGTACSFFSMRWGCPHHRC*RSRSHL
Trigger: CAGGTGACTCCTTGACCTCCAGCAACGATGATGAGG...ACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR-3UTR CCA 90 bp AAACGCCATTTGCTCCTGTTTTCGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGACCTCCTGCTGGTATTaGGAGGCAGGAGGTTTAGCA +
Preference number: 2 (lower is better)
Translates to: KRHLLLFSAGFQLLWAQGTSCWY*EAGGLA
Trigger: TGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGT...CCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCGAAAACAGGAGCAAATGGCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
3UTR GCA 72 bp TCCAGCCCCGTACACGGCCAGCAGGTGCCAGGCGACTaGCCTCCTTGTACCAGTGGCCACCACGCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: SSPVHGQQVPGD*PPCTSGHHAQP
Trigger: GGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGGCAGTCGCCTGGCACCTGCTGGCCGTGTACGGGGCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR GCA 72 bp CGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATaGTCCCGTCAAGACGCTGGGGCAGCAGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: RQASSFSGLRGQ*SRQDAGAAAAG
Trigger: CCCTGCTGCTGCTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
3UTR CCA 72 bp GGCAGAGGTAGCGGCCAGCATCCTCAGGTAGGAAGCTaGCAATCTCTAGGCGGCCCCTCCAGCCCCGTACAC +
Preference number: 3 (lower is better)
Translates to: GRGSGQHPQVGS*QSLGGPSSPVH
Trigger: GTGTACGGGGCTGGAGGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGGATGCTGGCCGCTACCTCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR-3UTR CAA 90 bp CTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAGCTCTCCAGCCAGGCTCAGCCGCAAGGGCACGGCCCTaGGACACGGCACAGCAACTC +
Preference number: 3 (lower is better)
Translates to: LVLGGRRFSIAALQPGSAARARP*DTAQQL
Trigger: GAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGC...GGCTGAGCCTGGCTGGAGAGCTGCTATGCTAAACCTCCTGCCTCCCAATACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR-3UTR CAA 90 bp GTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCAAGGCGACTGCCCTCCTaGTACCAGTGGCCACCACGC +
Preference number: 3 (lower is better)
Translates to: VPRRYCMQFLLHALGVCPRRLPS*YQWPPR
Trigger: GCGTGGTGGCCACTGGTACAAGGAGGGCAGTCGCCT...TGGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR CCA 72 bp GCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTaGGCCATCAGGACACAGGCACGGCAGCTCCAAGGG +
Preference number: 3 (lower is better)
Translates to: AKVQEAEQNPDI*AIRTQARQLQG
Trigger: CCCTTGGAGCTGCCGTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR GCA 72 bp CAGCGGAACTTGACGGTGTTCCCCGCAGGTACTGCATaGAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: QRNLTVFPAGTA*SFFSMRWGCVQ
Trigger: CTGGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCAAGTTCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR CCA 72 bp CATTTGCTCCTGTTTTCGGCAGGCTTCCAGCTTCTCTaGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGG +
Preference number: 3 (lower is better)
Translates to: HLLLFSAGFQLL*AQGPMLPSRRW
Trigger: CCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCGAAAACAGGAGCAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
3UTR TCA 72 bp ACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTaGCATTTGGGCCATCAGGACACAGGCACGGCAGCT +
Preference number: 3 (lower is better)
Translates to: TKRQGPRSRAEP*HLGHQDTGTAA
Trigger: AGCTGCCGTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
3UTR GCA 72 bp TGGACAGCGGAACTTGACGGTGTTCCCCGCAGGTACTaGATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: WTAELDGVPRRY*MQFLLHALGVC
Trigger: ACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR-3UTR CAA 90 bp CCGAATGCCTCCAATGCGGTTCTCCCCATGAAAGGCCTGTCCATCCTTAAGCCAGGGTCCTCATCATCGTaGCTGGAGGTCAAGGAGTCA +
Preference number: 3 (lower is better)
Translates to: PNASNAVLPMKGLSILKPGSSSS*LEVKES
Trigger: TGACTCCTTGACCTCCAGCAACGATGATGAGGACCC...TGGCTTAAGGATGGACAGGCCTTTCATGGGGAGAACCGCATTGGAGGCATTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR GCA 72 bp GAGGTCAAGGAGTCACCTGTAATCAAGGTGAGATTCTaGAGGACGATCATGGAGCCTCGTGCCAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: EVKESPVIKVRF*RTIMEPRARQR
Trigger: CCTCTGCCTGGCACGAGGCTCCATGATCGTCCTGCAGAATCTCACCTTGATTACAGGTGACTCCTTGACCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430285.5
3UTR CCA 72 bp GGTAACTGTGCCTATTCGAGGGGTCCCTATGGGACTTaGGGTCCTCATCATCGTTGCTGGAGGTCAAGGAGT +
Preference number: 3 (lower is better)
Translates to: GNCAYSRGPYGT*GPHHRCWRSRS
Trigger: ACTCCTTGACCTCCAGCAACGATGATGAGGACCCCAAGTCCCATAGGGACCCCTCGAATAGGCACAGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGCGGCCGTGGAGCGCCTaGCCTCGATACAGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLRPWSA*PRYSPA
Trigger: GGCCGGGCTGTATCGAGGGCAGGCGCTCCACGGCCG...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp GGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCTGCCCACCACGGCTGTaGTGTTGGCCGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GFQLLWAQGPMLPSRRWGCPPRL*CWPGAR
Trigger: CCGGGCTCCCGGCCAACACCACAGCCGTGGTGGGCA...GCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp CAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGCAGCGCAAGGCGGGGCCGCTaGAGGAGAGACGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: QLLWAQGPMLPSRRWGSSARRGR*RRDARL
Trigger: GAGGCGTGCGTCTCTCCTCCAGCGGCCCCGCCTTGC...GCTGCTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp GGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCTGGTGGGCGTGGGGTTaGCTGCAGCTGGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: GSSKGKGTALGHGTATLGWWAWG*LQLDSG
Trigger: TCCGCTGTCCAGCTGCAGGCAACCCCACGCCCACCA...GCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGGGCCTCGGGCGCTGCTaGGGTCCATGTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLGLGRC*GPCGVL
Trigger: GAGGACCCCACATGGACCGCAGCAGCGCCCGAGGCC...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAAGAGCGGCCCCTCACTaGTCCGAGGACCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPRAAPH*SEDRRG
Trigger: GCCCCGACGGTCCTCGGAGCAGTGAGGGGCCGCTCT...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CAGCTCTCCAGCCAGGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCAGAGCGGCCCCTCACTaGTCCGAGGACCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: QLSSQAQPNPGWGLSAKVRAAPH*SEDRRG
Trigger: GCCCCGACGGTCCTCGGAGCAGTGAGGGGCCGCTCT...GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCCTGGCTGGAGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGACTGGCCTCGGGCGCTaGTGCGGTCCATGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HGSSKGKGTALGHGTATLTGLGR*CGPCGV
Trigger: GACCCCACATGGACCGCAGCAGCGCCCGAGGCCAGT...CAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS-3UTR CCA 90 bp GCCCTCCTTGTACCAGTGGCCACCACGCTCAGCCCGCCCACAGCACAGACGCACAGCGGATGGTGGGCGTaGGGTTGCCTGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ALLVPVATTLSPPTAQTHSGWWA*GCLQLD
Trigger: GTCCAGCTGCAGGCAACCCCACGCCCACCATCCGCT...GTGCGTCTGTGCTGTGGGCGGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGTGCCCACCACGGCTGTaGTGTTGGCCGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQCPPRL*CWPGAR
Trigger: CCGGGCTCCCGGCCAACACCACAGCCGTGGTGGGCA...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CAGCAACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCCGGGGGTGCCGGCCGTaGAGCGCCTGCCCTCGATAC +
Preference number: 4 (lower is better)
Translates to: QQLWARGPMLSRSSTVSGRGCRP*SACPRY
Trigger: GTATCGAGGGCAGGCGCTCCACGGCCGGCACCCCCG...GCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR TCA 90 bp GCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGCCTGCGTCCTCGGCTaGCACGTTCCGCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: ARQLQGQGHGPWTRHSNSACVLG*HVPQVQ
Trigger: CTGTACCTGCGGAACGTGTCAGCCGAGGACGCAGGC...AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCGCAGCTCCACGTCGCTaGCCACCACGGCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GFQLLWAQGPMLPSRRWGAAPRR*PPRLWC
Trigger: ACACCACAGCCGTGGTGGGCAGCGACGTGGAGCTGC...GCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp AGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCCAGCCCTCCTTGTACCAGTaGCCACCACGCTCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSKGKGTALGHGTATLGQPSLYQ*PPRSAR
Trigger: GCGGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGG...CTGGCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCCACGGCTGTGGTGTTaGCCGGGAGCCCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGPRLWC*PGARPA
Trigger: TGCAGGCCGGGCTCCCGGCCAACACCACAGCCGTGG...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCTGCCCACCACGGCTGTaGTGTTGGCCGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: APCYQGRALCQAVAEPQGCPPRL*CWPGAR
Trigger: CCGGGCTCCCGGCCAACACCACAGCCGTGGTGGGCA...GCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCGCAAGGCGGGGCCGCTaGAGGAGAGACGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGARRGR*RRDARL
Trigger: GAGGCGTGCGTCTCTCCTCCAGCGGCCCCGCCTTGC...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTCAGCCCGTACAGCTCTaGGGGGCAGTGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: RQASSFSGLRGQCSRQDAQPVQL*GAVWGS
Trigger: CGACCCCCACACTGCCCCCCAGAGCTGTACGGGCTG...AGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp CAGCTCTCCAGCCAGGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAGCCCGTACAGCTCTaGGGGGCAGTGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: QLSSQAQPNPGWGLSAKVQPVQL*GAVWGS
Trigger: CGACCCCCACACTGCCCCCCAGAGCTGTACGGGCTG...GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCCTGGCTGGAGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAAGGAGCAGGTGCTGCTaGCGTCCCCACCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPRSRCC*RPHQRG
Trigger: CCCCCTCTGGTGGGGACGCCAGCAGCACCTGCTCCT...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCCTGCGTCCTCGGCTaGCACGTTCCGCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPACVLG*HVPQVQ
Trigger: CTGTACCTGCGGAACGTGTCAGCCGAGGACGCAGGC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp CACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGCAGGGGGTCGTGGCTaGAGACAGAATCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HGSSKGKGTALGHGTATLAGGRG*RQNRWR
Trigger: CCTCCAGCGATTCTGTCTTCAGCCACGACCCCCTGC...CAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGTGCCTTCCTCGAGCCTaGGTGACTCCGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGAPCYQGRALCQAVAECLPRA*VTPRPA
Trigger: TGCTGGGCGCGGAGTCACGCAGGCTCGAGGAAGGCA...CTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp GCCATCAGGACACAGGCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACAGGGCGTGGGGTTGCCTaGAGCTGGACAGCGGAACTT +
Preference number: 4 (lower is better)
Translates to: AIRTQARQLQGQGHGPWTGRGVA*SWTAEL
Trigger: AAGTTCCGCTGTCCAGCTGCAGGCAACCCCACGCCC...TGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGCCTGTGTCCTGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCATGGTGGGCGTGGGGTTaGCTGCAGCTGGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPWWAWG*LQLDSG
Trigger: TCCGCTGTCCAGCTGCAGGCAACCCCACGCCCACCA...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCAGCTCCACGTCGCTaGCCACCACGGCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPAAPRR*PPRLWC
Trigger: ACACCACAGCCGTGGTGGGCAGCGACGTGGAGCTGC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGGCCTCGGGCGCTaGTGCGGTCCATGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNPGLGR*CGPCGV
Trigger: GACCCCACATGGACCGCAGCAGCGCCCGAGGCCAGG...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp CCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCCCTCCTTGTACCAGTaGCCACCACGCTCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: PGAPCYQGRALCQAVAEPPSLYQ*PPRSAR
Trigger: GCGGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGG...GGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAAGCGGATGGTGGGCGTaGGGTTGCCTGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPSGWWA*GCLQLD
Trigger: GTCCAGCTGCAGGCAACCCCACGCCCACCATCCGCT...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CACAGCAACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGCCACGGCTGTGGTGTTaGCCGGGAGCCCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HSNSGPGAPCYQGRALCQPRLWC*PGARPA
Trigger: TGCAGGCCGGGCTCCCGGCCAACACCACAGCCGTGG...CTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCTGTGGGGTCCTCCTCTaGCAGCACCGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QGPHAIKVEHCVRLWLSPCGVLL*QHREPG
Trigger: GCCTGGCTCACGGTGCTGCCAGAGGAGGACCCCACA...GGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGAGCTTCTGCACAGTaGCGGGCGGGCGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PCYQGRALCQAVAEPQGPRASAQ*RAGGGA
Trigger: GGCACCCCCGCCCGCCCGCCACTGTGCAGAAGCTCT...TGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp GGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCGCAAGGCGGGGCCGCTaGAGGAGAGACGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: GGSEAQNLLLVLGGRRFSARRGR*RRDARL
Trigger: GAGGCGTGCGTCTCTCCTCCAGCGGCCCCGCCTTGC...GCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCGCCACAGTGCTGGCTTaGTCAGGCCGGGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGATVLA*SGRAGS
Trigger: GGACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGC...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGGCAGGAGACCAGGACTaGGAAGGAGAGCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPGAPCYQGRALCQAVAEAGDQD*EGERPL
Trigger: GAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCTGC...CTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGCAGCTTGAAGGTAGGCCTCTaGGAGGGCGCTGCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QLLWAQGPMLPSRRWGSSLKVGL*EGAACQ
Trigger: CTGGCACGCAGCGCCCTCCCAGAGGCCTACCTTCAA...GCTGCTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp GGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAAGGAGCAGGTGCTGCTaGCGTCCCCACCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSAKPGMGTKRQGPRSRARSRCC*RPHQRG
Trigger: CCCCCTCTGGTGGGGACGCCAGCAGCACCTGCTCCT...TGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CAGCAACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCAGGAGCAGGTGCTGCTaGCGTCCCCACCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QQLWARGPMLSRSSTVSGRSRCC*RPHQRG
Trigger: CCCCCTCTGGTGGGGACGCCAGCAGCACCTGCTCCT...GCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp GGGAAAGGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGGCCTGCGTCCTCGGCTaGCACGTTCCGCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: GKGGSEAQNLLLVLGGRRACVLG*HVPQVQ
Trigger: CTGTACCTGCGGAACGTGTCAGCCGAGGACGCAGGC...CCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCCTTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGGGGAGCCCCCGAGGGTaGAGATCTCCCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQGSPRG*RSPIAG
Trigger: TCCTGCTATGGGAGATCTTCACCCTCGGGGGCTCCC...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp CAGCTCTCCAGCCAGGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCGGGAGCCCCCGAGGGTaGAGATCTCCCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLSSQAQPNPGWGLSAKVGSPRG*RSPIAG
Trigger: TCCTGCTATGGGAGATCTTCACCCTCGGGGGCTCCC...GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCCTGGCTGGAGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTAGCTCCTGCTCTTGCTaGTCCAGGCTGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQASSFSGLRGQCSRQDASSCSC*SRLGAR
Trigger: CCTGGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCT...AGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAAGCTCCTGCTCTTGCTaGTCCAGGCTGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPSSCSC*SRLGAR
Trigger: CCTGGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCT...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCGTCAGCTCCTGCTCTTaGTGCTCCAGGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGPHAIKVEHCVRLWLSPVSSCS*CSRLGA
Trigger: GGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGAC...GGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCGCTACTGTCAGCTCCTaGTCTTGCTGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSSKGKGTALGHGTATLGATVSS*SCCSRL
Trigger: CAGCCTGGAGCAGCAAGAGCAGGAGCTGACAGTAGC...GCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCAGGTGCCAGGCGACTaGCCTCCTTGTACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQQVPGD*PPCTSG
Trigger: GCCACTGGTACAAGGAGGGCAGTCGCCTGGCACCTG...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GGGGTTGCCTGCAGCTGGACAGCGGAACTTGACGGTGTTCCCCGCAGGTACTGCCAGGTGCCAGGCGACTaGCCTCCTTGTACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GVACSWTAELDGVPRRYCQVPGD*PPCTSG
Trigger: GCCACTGGTACAAGGAGGGCAGTCGCCTGGCACCTG...GCAGTACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAGCTGCAGGCAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGGGGCGTGGGGTTGCCTaGAGCTGGACAGCGGAACTT +
Preference number: 4 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLGRGVA*SWTAEL
Trigger: AAGTTCCGCTGTCCAGCTGCAGGCAACCCCACGCCC...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp AGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCCAGGATGGCGCAGCCGAATaGCTCCAATGCGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSKGKGTALGHGTATLGQDGAAE*LQCGSP
Trigger: GGGAGAACCGCATTGGAGGCATTCGGCTGCGCCATC...CTGGCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGGCAGCTCCACGTCGCTaGCCACCACGGCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AQPNPGWGLSAKVQEAEQAAPRR*PPRLWC
Trigger: ACACCACAGCCGTGGTGGGCAGCGACGTGGAGCTGC...CTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACGGCCTCGGGCGCTGCTaGGGTCCATGTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: APRSKKPSRTLTFGPSGHGLGRC*GPCGVL
Trigger: GAGGACCCCACATGGACCGCAGCAGCGCCCGAGGCC...GTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACAAGCGGGAGAGCTTCTaGACAGTGGCGGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNKRESF*TVAGGR
Trigger: CCGCCCGCCCGCCACTGTGCAGAAGCTCTCCCGCTT...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGGGGCCAGGGGCCCCATaGTATCAAGGTCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQGPGAP*YQGRAL
Trigger: CAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCC...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGAGGGTCCTGCTCACCTaGCTCCTCCTCACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPASLGSGANAPVKTLGQRVLLT*LLLTWL
Trigger: GAGCCAGGTGAGGAGGAGCCAGGTGAGCAGGACCCT...CTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCCCTCCTTGTACCAGTaGCCACCACGCTCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHPSLYQ*PPRSAR
Trigger: GCGGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGG...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCAGCGGATGGTGGGCGTaGGGTTGCCTGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGSGWWA*GCLQLD
Trigger: GTCCAGCTGCAGGCAACCCCACGCCCACCATCCGCT...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp TCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCACGGCTGTGGTGTTaGCCGGGAGCCCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SAKPGMGTKRQGPRSRAEPRLWC*PGARPA
Trigger: TGCAGGCCGGGCTCCCGGCCAACACCACAGCCGTGG...TTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCTGCTGCGGTCCATGTaGGGTCCTCCTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGAPCYQGRALCQAVAEPLLRSM*GPPLAA
Trigger: TGCTGCCAGAGGAGGACCCCACATGGACCGCAGCAG...GGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCAGCCAGGTCCCGGTaGATACACTTCCGGGACTCC +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPAARSR*IHFRDS
Trigger: GGAGTCCCGGAAGTGTATCCACCGGGACCTGGCTGC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACAGCCCGTACAGCTCTaGGGGGCAGTGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPQPVQL*GAVWGS
Trigger: CGACCCCCACACTGCCCCCCAGAGCTGTACGGGCTG...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGTTGAAGGTAGGCCTCTaGGAGGGCGCTGCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLLKVGL*EGAACQ
Trigger: CTGGCACGCAGCGCCCTCCCAGAGGCCTACCTTCAA...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAGACTCCAGGGAGAACTaGCCTCGGGCGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PCYQGRALCQAVAEPQGPDSREN*PRALLR
Trigger: CCGCAGCAGCGCCCGAGGCCAGTTCTCCCTGGAGTC...TGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS-3UTR CCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACGATGCGCCCAGTACCTaGCAGCACCGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHDAPST*QHREPG
Trigger: GCCTGGCTCACGGTGCTGCCAGGTACTGGGCGCATC...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR TCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCACTGGACAGCGGAACTTaGCGGTGTTCCCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPLDSGT*RCSPQV
Trigger: TACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAG...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGCTGGACAGCGGAACTTaGCGGTGTTCCCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLLDSGT*RCSPQV
Trigger: TACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAG...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp GGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGACGAGACTCCAGTGCTaGTGGCGCAGCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: GPGAPCYQGRALCQAVAETRLQC*WRSRMP
Trigger: AGGCATTCGGCTGCGCCATCAGCACTGGAGTCTCGT...CTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAACGAGACTCCAGTGCTaGTGGCGCAGCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPTRLQC*WRSRMP
Trigger: AGGCATTCGGCTGCGCCATCAGCACTGGAGTCTCGT...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp CACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGTGCCTGCACAGCCTTaGGCCTTGCTCATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: HGSSKGKGTALGHGTATLVPAQP*ALLMSA
Trigger: TGCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCAC...CAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGCTACTGTCAGCTCCTaGTCTTGCTGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARQLQGQGHGPWTRHSNSATVSS*SCCSRL
Trigger: CAGCCTGGAGCAGCAAGAGCAGGAGCTGACAGTAGC...AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCACAGACGCACAGGCTaGCCAAGGGCTACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQHRRTG*PRATVS
Trigger: GCTGACAGTAGCCCTTGGGCAGCCTGTGCGTCTGTG...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCGATCATGGAGCCTCGTaGCAGGCAGAGGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGDHGAS*QAEVAA
Trigger: GGCCGCTACCTCTGCCTGGCACGAGGCTCCATGATC...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGGATGGCGCAGCCGAATaGCTCCAATGCGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQDGAAE*LQCGSP
Trigger: GGGAGAACCGCATTGGAGGCATTCGGCTGCGCCATC...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGAGAGCGGCCCCTCACTaGTCCGAGGACCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LSAKVQEAEQNPDIWAIRRAAPH*SEDRRG
Trigger: GCCCCGACGGTCCTCGGAGCAGTGAGGGGCCGCTCT...CCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCGGCCACCAGCCTATGTaGCTGCACAGCCTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: QGPHAIKVEHCVRLWLSPGHQPM*LHSLEP
Trigger: AGGCTCAAGGCTGTGCAGGCACATAGGCTGGTGGCC...GGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGGGCCAGGGGCCCCATaGTATCAAGGTCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: GSAKPGMGTKRQGPRSRAGPGAP*YQGRAL
Trigger: CAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCC...TGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCATCAGGACACAGGCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACAAGGCCCAGAACCTCCTaGTGGTATTGGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AIRTQARQLQGQGHGPWTRPRTS*WYWEAG
Trigger: TCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCT...TGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGCCTGTGTCCTGATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp AGCGGCCAGCATCCTCAGGTAGGAAGCTGGCAATCTCTAGGCGGCCCCTCCAGCCCTCAGGTAGGAAGCTaGCAATCTCTAGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SGQHPQVGSWQSLGGPSSPQVGS*QSLGGP
Trigger: GGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGG...GCTGGAGGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGGATGCTGGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CCA 90 bp GTAGGAAGCTGGCAATCTCTAGGCGGCCCCTCCAGCCCCGTACACGGCCAGCAGTCTGCAGGACGATCATaGAGCCTCGTGCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VGSWQSLGGPSSPVHGQQSAGRS*SLVPGR
Trigger: TCTGCCTGGCACGAGGCTCCATGATCGTCCTGCAGA...CTGCTGGCCGTGTACGGGGCTGGAGGGGCCGCCTAGAGATTGCCAGCTTCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CCA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGGGGGTTGCCTGCAGCTaGACAGCGGAACTTGACGGT +
Preference number: 4 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLGVACS*TAELDG
Trigger: ACCGTCAAGTTCCGCTGTCCAGCTGCAGGCAACCCC...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGTCTGCACGTACTACCTaGCCAAAGCAGCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: HGSSKGKGTALGHGTATLSARTT*PKQPSP
Trigger: AGGCGAGGGCTGCTTTGGCCAGGTAGTACGTGCAGA...CAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TTGCTCCTGTTTTCGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCGCCACAGTGCTGGCTTaGTCAGGCCGGGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLLFSAGFQLLWAQGPMLATVLA*SGRAGS
Trigger: GGACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGC...GAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCGAAAACAGGAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGCCACAGTGCTGGCTTaGTCAGGCCGGGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQATVLA*SGRAGS
Trigger: GGACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGC...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGCCCGCAGGTTTCCCTTaGCGGCGCACTCCACGATCA +
Preference number: 4 (lower is better)
Translates to: AQPNPGWGLSAKVQEAEQPAGFP*RRTPRS
Trigger: TGATCGTGGAGTGCGCCGCCAAGGGAAACCTGCGGG...CTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGGCAGGAGACCAGGACTaGGAAGGAGAGCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRAGDQD*EGERPL
Trigger: GAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCTGC...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CAGCAACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCGCAGCCAGGTCCCGGTaGATACACTTCCGGGACTCC +
Preference number: 4 (lower is better)
Translates to: QQLWARGPMLSRSSTVSGAARSR*IHFRDS
Trigger: GGAGTCCCGGAAGTGTATCCACCGGGACCTGGCTGC...GCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGAGCTGGATCCCAATaGCAGGGGGTCGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RQASSFSGLRGQCSRQDAGAGSQ*QGVVAE
Trigger: TTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCC...AGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGGAGCTGGATCCCAATaGCAGGGGGTCGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPGAGSQ*QGVVAE
Trigger: TTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGCAAGGGCACGGCCCTTaGACACGGCACAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: LPASLGSGANAPVKTLGQQGHGP*TRHSNS
Trigger: AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTG...CTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCAGCCAAACCCGGGATaGGGACTAAGCGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQQPNPG*GLSAKV
Trigger: GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp AAACGCCATTTGCTCCTGTTTTCGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGTTCCTCGAGCCTGCGTaGCTCCGCGCCCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: KRHLLLFSAGFQLLWAQGFLEPA*LRAQHR
Trigger: CCTGTGCTGGGCGCGGAGTCACGCAGGCTCGAGGAA...CCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCGAAAACAGGAGCAAATGGCGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR TCA 90 bp GGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCATGCGGTTCTCCCCATaGAAGGCCTGTCCATCCTTA +
Preference number: 4 (lower is better)
Translates to: GSSKGKGTALGHGTATLGMRFSP*KACPSL
Trigger: TAAGGATGGACAGGCCTTTCATGGGGAGAACCGCAT...GCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp GGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAACGAGACTCCAGTGCTaGTGGCGCAGCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: GSAKPGMGTKRQGPRSRATRLQC*WRSRMP
Trigger: AGGCATTCGGCTGCGCCATCAGCACTGGAGTCTCGT...TGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp CGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTCCGACGCGTACAGGATaGTGTCCGTATACCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RQASSFSGLRGQCSRQDAPTRTG*CPYTWP
Trigger: AGGCCAGGTATACGGACATCATCCTGTACGCGTCGG...AGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR TCA 90 bp CTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGAGCCGAGCAGAACCCTaGCATTTGGGCCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPASLGSGANAPVKTLGQSRAEP*HLGHQD
Trigger: GTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCT...CTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp GGGGAAAGGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGGACTTCCCACCAACTaGCTTCCTCGAGCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GERGFRGPEPPAGIGRQEGLPTN*LPRACV
Trigger: CACGCAGGCTCGAGGAAGGCAGTTGGTGGGAAGTCC...CTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCCTTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGAGCTCCTGCTCTTGCTaGTCCAGGCTGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRSSCSC*SRLGAR
Trigger: CCTGGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCT...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAGTCAGCTCCTGCTCTTaGTGCTCCAGGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPVSSCS*CSRLGA
Trigger: GGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGAC...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACAGACGCACAGGCTaGCCAAGGGCTACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGHRRTG*PRATVS
Trigger: GCTGACAGTAGCCCTTGGGCAGCCTGTGCGTCTGTG...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GAGATTCTGCAGGACGATCATGGAGCCTCGTGCCAGGCAGAGGTAGCGGCCAGCCACAGACGCACAGGCTaGCCAAGGGCTACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EILQDDHGASCQAEVAASHRRTG*PRATVS
Trigger: GCTGACAGTAGCCCTTGGGCAGCCTGTGCGTCTGTG...GCTGGCCGCTACCTCTGCCTGGCACGAGGCTCCATGATCGTCCTGCAGAATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp GGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCCAGGTGCCAGGCGACTaGCCTCCTTGTACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GGSEAQNLLLVLGGRRFSQVPGD*PPCTSG
Trigger: GCCACTGGTACAAGGAGGGCAGTCGCCTGGCACCTG...GCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp AACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGATCATGGAGCCTCGTaGCAGGCAGAGGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: NSGPGAPCYQGRALCQAVDHGAS*QAEVAA
Trigger: GGCCGCTACCTCTGCCTGGCACGAGGCTCCATGATC...CACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAGGGCGTGGGGTTGCCTaGAGCTGGACAGCGGAACTT +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPGRGVA*SWTAEL
Trigger: AAGTTCCGCTGTCCAGCTGCAGGCAACCCCACGCCC...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGCCGAATGCCTCCAATaGGGTTCTCCCCATGAAAGG +
Preference number: 4 (lower is better)
Translates to: ARQLQGQGHGPWTRHSNSAECLQ*GSPHER
Trigger: CCTTTCATGGGGAGAACCGCATTGGAGGCATTCGGC...AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCGCCGATGGAATTGCCTaGGAGGCAGGTGTACTCGCC +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGADGIA*EAGVLA
Trigger: GGCGAGTACACCTGCCTCGCAGGCAATTCCATCGGC...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCATCAGGACACAGGCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACACAGCCTTGAGCCTTaGTCATGTCTGCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: AIRTQARQLQGQGHGPWTHSLEP*SCLHPR
Trigger: TCTGGGGTGCAGACATGAGCAAGGCTCAAGGCTGTG...TGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGCCTGTGTCCTGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACGGCCACCAGCCTATGTaGCTGCACAGCCTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHGHQPM*LHSLEP
Trigger: AGGCTCAAGGCTGTGCAGGCACATAGGCTGGTGGCC...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAAGGCCCAGAACCTCCTaGTGGTATTGGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASSFSGLRGQCSRQDAGARPRTS*WYWEAG
Trigger: TCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCT...TGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp TCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAAGGGCTCAGGGGCCAATaGTCCCGTCAAGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAKPGMGTKRQGPRSRAEGLRGQ*SRQDAG
Trigger: CCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCC...TTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp CAGCTCTCCAGCCAGGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCTCAGGGACCCAAGCTaGACTTCCCACCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: QLSSQAQPNPGWGLSAKVLRDPS*TSHQLP
Trigger: AGGCAGTTGGTGGGAAGTCCAGCTTGGGTCCCTGAG...GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCCTGGCTGGAGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCTCCAGGGACAAGACTaGAGGCCCAGGCACACTCAG +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHLQGQD*RPRHTQ
Trigger: CTGAGTGTGCCTGGGCCTCCAGTCTTGTCCCTGGAG...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCATCTGCAGGACGATCATaGAGCCTCGTGCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPSAGRS*SLVPGR
Trigger: TCTGCCTGGCACGAGGCTCCATGATCGTCCTGCAGA...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGGGGTTGCCTGCAGCTaGACAGCGGAACTTGACGGT +
Preference number: 4 (lower is better)
Translates to: GSAKPGMGTKRQGPRSRAGVACS*TAELDG
Trigger: ACCGTCAAGTTCCGCTGTCCAGCTGCAGGCAACCCC...TGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCATCTGCACGTACTACCTaGCCAAAGCAGCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPSARTT*PKQPSP
Trigger: AGGCGAGGGCTGCTTTGGCCAGGTAGTACGTGCAGA...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCTACAGGGGCCCTTCCTaGGTGCAGACACCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGYRGPS*VQTPSR
Trigger: CCTGCTTGGTGTCTGCACCCAGGAAGGGCCCCTGTA...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCCGCAGGTTTCCCTTaGCGGCGCACTCCACGATCA +
Preference number: 4 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNPAGFP*RRTPRS
Trigger: TGATCGTGGAGTGCGCCGCCAAGGGAAACCTGCGGG...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCCGCAGGTTTCCCTTaGCGGCGCACTCCACGATCA +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRPAGFP*RRTPRS
Trigger: TGATCGTGGAGTGCGCCGCCAAGGGAAACCTGCGGG...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGGCACGGCAGGCAGGAGACCAGGACTaGGAAGGAGAGCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QEAEQNPDIWAIRTQARQAGDQD*EGERPL
Trigger: GAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCTGC...CTGCCGTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCATTGAAGGTAGGCCTCTaGGAGGGCGCTGCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPLKVGL*EGAACQ
Trigger: CTGGCACGCAGCGCCCTCCCAGAGGCCTACCTTCAA...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCGGAGCTGGATCCCAATaGCAGGGGGTCGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGGAGSQ*QGVVAE
Trigger: TTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCC...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCACTGTCACATGTGAGGTaGGGGATGCGCCCAGTACCT +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPLSHVR*GMRPVP
Trigger: AGGTACTGGGCGCATCCCCCACCTCACATGTGACAG...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR TCA 90 bp GCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTATGCGGTTCTCCCCATaGAAGGCCTGTCCATCCTTA +
Preference number: 4 (lower is better)
Translates to: ARQLQGQGHGPWTRHSNSMRFSP*KACPSL
Trigger: TAAGGATGGACAGGCCTTTCATGGGGAGAACCGCAT...AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp AGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCCAGCAGGACCTCCACCTCTaGGCTATTGATGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSKGKGTALGHGTATLGQQDLHL*AIDVCS
Trigger: ACTGCAGACATCAATAGCTCAGAGGTGGAGGTCCTG...CTGGCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGGAGCCCCCGAGGGTaGAGATCTCCCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQGSPRG*RSPIAG
Trigger: TCCTGCTATGGGAGATCTTCACCCTCGGGGGCTCCC...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp TCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAAGCAGGGGGTCGTGGCTaGAGACAGAATCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SAKPGMGTKRQGPRSRAEAGGRG*RQNRWR
Trigger: CCTCCAGCGATTCTGTCTTCAGCCACGACCCCCTGC...TTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGCAGGGGGTCGTGGCTaGAGACAGAATCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQAGGRG*RQNRWR
Trigger: CCTCCAGCGATTCTGTCTTCAGCCACGACCCCCTGC...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAATCAGGCTGTCACATGTaGGGTGGGGGATGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQSGCHM*GGGCAQ
Trigger: CTGGGCGCATCCCCCACCTCACATGTGACAGCCTGA...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR GCA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCACAGACGCACAGGCTaGCCAAGGGCTACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNHRRTG*PRATVS
Trigger: GCTGACAGTAGCCCTTGGGCAGCCTGTGCGTCTGTG...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGGCACGGCAGCAGGTGCCAGGCGACTaGCCTCCTTGTACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QEAEQNPDIWAIRTQARQQVPGD*PPCTSG
Trigger: GCCACTGGTACAAGGAGGGCAGTCGCCTGGCACCTG...CTGCCGTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGGTGTGTCCAGTAGGGTaGTTGCTGGGGGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLVCPVG*LLGVTV
Trigger: CACAGTTACCCCCAGCAAGCACCCTACTGGACACAC...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGTGTGTCCAGTAGGGTaGTTGCTGGGGGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPVCPVG*LLGVTV
Trigger: CACAGTTACCCCCAGCAAGCACCCTACTGGACACAC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGGCAGTTTCTTCTCCATaGGCTGGGGGTGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GPGAPCYQGRALCQAVAEAVSSP*AGGVSS
Trigger: ACTGGACACACCCCCAGCGCATGGAGAAGAAACTGC...CTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCCCGCAGGTACTGCATaGAGTTTCTTCTCCATGCGC +
Preference number: 4 (lower is better)
Translates to: PGAPCYQGRALCQAVAEPPAGTA*SFFSMR
Trigger: GCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGG...GGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCGCAGGTACTGCATaGAGTTTCTTCTCCATGCGC +
Preference number: 4 (lower is better)
Translates to: GPGAPCYQGRALCQAVAEPAGTA*SFFSMR
Trigger: GCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGG...CTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGTGGTGGGCGTGGGGTTaGCTGCAGCTGGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: AKVQEAEQNPDIWAIRTQWWAWG*LQLDSG
Trigger: TCCGCTGTCCAGCTGCAGGCAACCCCACGCCCACCA...CTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp AACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCCGATGGAATTGCCTaGGAGGCAGGTGTACTCGCC +
Preference number: 4 (lower is better)
Translates to: NSGPGAPCYQGRALCQAVADGIA*EAGVLA
Trigger: GGCGAGTACACCTGCCTCGCAGGCAATTCCATCGGC...CACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGAGAGGCCGATGGAATTaGCTGCGAGGCAGGTGTACT +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQRGRWN*LRGRCT
Trigger: AGTACACCTGCCTCGCAGGCAATTCCATCGGCCTCT...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAGAGGCCGATGGAATTaGCTGCGAGGCAGGTGTACT +
Preference number: 4 (lower is better)
Translates to: QGPHAIKVEHCVRLWLSPRGRWN*LRGRCT
Trigger: AGTACACCTGCCTCGCAGGCAATTCCATCGGCCTCT...GGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQGMSLT*RKSLTP
Trigger: TGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCC...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCCAGGCAGGCGGCCGTTaGTGGTTTTCTTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: GSSKGKGTALGHGTATLGQAGGR*WFSYSS
Trigger: ACTACTATAAGAAAACCAGCAACGGCCGCCTGCCTG...GCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCACACAGCCTTGAGCCTTaGTCATGTCTGCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPHSLEP*SCLHPR
Trigger: TCTGGGGTGCAGACATGAGCAAGGCTCAAGGCTGTG...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAGGCCACCAGCCTATGTaGCTGCACAGCCTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPGHQPM*LHSLEP
Trigger: AGGCTCAAGGCTGTGCAGGCACATAGGCTGGTGGCC...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCACTCAGGGACCCAAGCTaGACTTCCCACCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: GSAKPGMGTKRQGPRSRALRDPS*TSHQLP
Trigger: AGGCAGTTGGTGGGAAGTCCAGCTTGGGTCCCTGAG...TGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCTCAGGTAGGAAGCTaGCAATCTCTAGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRPQVGS*QSLGGP
Trigger: GGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGG...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCCCTCATCATCGTTGCTaGAGGTCAAGGAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: GFQLLWAQGPMLPSRRWGPHHRC*RSRSHL
Trigger: CAGGTGACTCCTTGACCTCCAGCAACGATGATGAGG...GCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp TGCCCTCCTTGTACCAGTGGCCACCACGCTCAGCCCGCCCACAGCACAGACGCACCTCATCATCGTTGCTaGAGGTCAAGGAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: CPPCTSGHHAQPAHSTDAPHHRC*RSRSHL
Trigger: CAGGTGACTCCTTGACCTCCAGCAACGATGATGAGG...TGCGTCTGTGCTGTGGGCGGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CCA 90 bp GCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGTCCCTATGGGACTTaGGGTCCTCATCATCGTTGC +
Preference number: 4 (lower is better)
Translates to: AGFQLLWAQGPMLPSRRWGPYGT*GPHHRC
Trigger: GCAACGATGATGAGGACCCCAAGTCCCATAGGGACC...CCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGGGGGTTGCCTGCAGCTaGACAGCGGAACTTGACGGT +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRGVACS*TAELDG
Trigger: ACCGTCAAGTTCCGCTGTCCAGCTGCAGGCAACCCC...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAGGTAGGAGAGGCCGATaGAATTGCCTGCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPGRRGR*NCLRGR
Trigger: CCTGCCTCGCAGGCAATTCCATCGGCCTCTCCTACC...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACGGTAGGAGAGGCCGATaGAATTGCCTGCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNGRRGR*NCLRGR
Trigger: CCTGCCTCGCAGGCAATTCCATCGGCCTCTCCTACC...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAGCTCTCCAGCCAGGCTCAGCCCTGCTGCGGTCCATGTaGGGTCCTCCTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVLGGRRFSIAALQPGSALLRSM*GPPLAA
Trigger: TGCTGCCAGAGGAGGACCCCACATGGACCGCAGCAG...GGCTGAGCCTGGCTGGAGAGCTGCTATGCTAAACCTCCTGCCTCCCAATACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGCAGCCAGGTCCCGGTaGATACACTTCCGGGACTCC +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQAARSR*IHFRDS
Trigger: GGAGTCCCGGAAGTGTATCCACCGGGACCTGGCTGC...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCAGCCAAACCCGGGATaGGGACTAAGCGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNQPNPG*GLSAKV
Trigger: GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp TCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACTGGACAGCGGAACTTaGCGGTGTTCCCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SAKPGMGTKRQGPRSRAELDSGT*RCSPQV
Trigger: TACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAG...TTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp GTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCACTGGACAGCGGAACTTaGCGGTGTTCCCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VPRRYCMQFLLHALGVCPLDSGT*RCSPQV
Trigger: TACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAG...TGGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR TCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAGTGCCTGCACAGCCTTaGGCCTTGCTCATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPVPAQP*ALLMSA
Trigger: TGCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCAC...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp CACAGCAACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGAGCCGAGCAGAACCCTaGCATTTGGGCCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: HSNSGPGAPCYQGRALCQSRAEP*HLGHQD
Trigger: GTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCT...CTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAGCTCTCGTCAGCTCCTGCTCTTaGTGCTCCAGGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AQNLLLVLGGRRFSIAALVSSCS*CSRLGA
Trigger: GGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGAC...GAGAGCTGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GGACAGCGGAACTTGACGGTGTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCGTCAGCTCCTGCTCTTaGTGCTCCAGGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GQRNLTVFPAGTACSFFSVSSCS*CSRLGA
Trigger: GGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGAC...GGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCAAGTTCCGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGGCTACTGTCAGCTCCTaGTCTTGCTGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRATVSS*SCCSRL
Trigger: CAGCCTGGAGCAGCAAGAGCAGGAGCTGACAGTAGC...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCCTCCTTGTACCAGTGGCCACCACGCTCAGCCCGCCCACAGCACAGACGCACATCAAGGTGAGATTCTaGAGGACGATCATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALLVPVATTLSPPTAQTHIKVRF*RTIMEP
Trigger: AGGCTCCATGATCGTCCTGCAGAATCTCACCTTGAT...GTGCGTCTGTGCTGTGGGCGGGCTGAGCGTGGTGGCCACTGGTACAAGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp GCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGTCCTCATCATCGTTaGTGGAGGTCAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: AGFQLLWAQGPMLPSRRWGPHHR*WRSRSH
Trigger: GTGACTCCTTGACCTCCAGCAACGATGATGAGGACC...CCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp CAGCAACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCGCAGTTTCTTCTCCATaGGCTGGGGGTGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QQLWARGPMLSRSSTVSGAVSSP*AGGVSS
Trigger: ACTGGACACACCCCCAGCGCATGGAGAAGAAACTGC...GCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCCCGCAGGTACTGCATaGAGTTTCTTCTCCATGCGC +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHPAGTA*SFFSMR
Trigger: GCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGG...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp TTGCTCCTGTTTTCGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCGATGGCGCAGCCGAATaGCTCCAATGCGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLLFSAGFQLLWAQGPMLDGAAE*LQCGSP
Trigger: GGGAGAACCGCATTGGAGGCATTCGGCTGCGCCATC...GAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCGAAAACAGGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp GCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGCCGTTGATGACGATGTaGTTCAGCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: AGFQLLWAQGPMLPSRRWPLMTM*FSHWMW
Trigger: CCACATCCAGTGGCTGAAGCACATCGTCATCAACGG...CCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp CAGCAACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: QQLWARGPMLSRSSTVSGGMSLT*RKSLTP
Trigger: TGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCC...GCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGCATGCCAAAGGCCTCTaGACGTACTACCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LPASLGSGANAPVKTLGQHAKGL*TYYLAK
Trigger: TTTGGCCAGGTAGTACGTGCAGAGGCCTTTGGCATG...CTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR GCA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGCATGCCAAAGGCCTCTaGACGTACTACCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLHAKGL*TYYLAK
Trigger: TTTGGCCAGGTAGTACGTGCAGAGGCCTTTGGCATG...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAGGACTTCCCACCAACTaGCTTCCTGGCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PCYQGRALCQAVAEPQGPGLPTN*LPGSSS
Trigger: TGAGGAGGAGCCAGGAAGGCAGTTGGTGGGAAGTCC...TGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS-3UTR GCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACTGGGAGACTTGGTTCTaGCTGCTGGAGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHWETWF*LLESGC
Trigger: ACAGCCTGACTCCAGCAGGCAGAACCAAGTCTCCCA...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR CCA 90 bp GCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACCTCCAGGGACAAGACTaGAGGCCCAGGCACACTCAG +
Preference number: 4 (lower is better)
Translates to: APRSKKPSRTLTFGPSGHLQGQD*RPRHTQ
Trigger: CTGAGTGTGCCTGGGCCTCCAGTCTTGTCCCTGGAG...GTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACCCTCAGGTAGGAAGCTaGCAATCTCTAGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: APRSKKPSRTLTFGPSGHPQVGS*QSLGGP
Trigger: GGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGG...GTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCCTCATCATCGTTGCTaGAGGTCAAGGAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQPHHRC*RSRSHL
Trigger: CAGGTGACTCCTTGACCTCCAGCAACGATGATGAGG...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACGGTCCCTATGGGACTTaGGGTCCTCATCATCGTTGC +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHGPYGT*GPHHRC
Trigger: GCAACGATGATGAGGACCCCAAGTCCCATAGGGACC...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp TCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCATGTGGGGTCCTCCTCTaGCAGCACCGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SEAQNLLLVLGGRRFSIACGVLL*QHREPG
Trigger: GCCTGGCTCACGGTGCTGCCAGAGGAGGACCCCACA...TGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAATACAGGGGCCCTTCCTaGGTGCAGACACCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQYRGPS*VQTPSR
Trigger: CCTGCTTGGTGTCTGCACCCAGGAAGGGCCCCTGTA...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp CTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGACCTCCTGCTGGTATTaGGAGGCAGGAGGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LPASLGSGANAPVKTLGQTSCWY*EAGGLA
Trigger: TGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGT...CTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp GGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCCCCAGAACCTCCTGCTaGTATTGGGAGGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GGSEAQNLLLVLGGRRFSPRTSC*YWEAGG
Trigger: ACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGG...GCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGGGGAGAACTGCAAAGTaGGAGACTTGGTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQGRTAK*ETWFCL
Trigger: CAGGCAGAACCAAGTCTCCCACTTTGCAGTTCTCCC...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR TCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGGACCTCCACCTCTaGGCTATTGATGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHQDLHL*AIDVCS
Trigger: ACTGCAGACATCAATAGCTCAGAGGTGGAGGTCCTG...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp TCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCAGTGCTACTGTCAGCTCCTaGTCTTGCTGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPQVLHAVSSPCAGGVSSATVSS*SCCSRL
Trigger: CAGCCTGGAGCAGCAAGAGCAGGAGCTGACAGTAGC...ACTGGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CCGAATGCCTCCAATGCGGTTCTCCCCATGAAAGGCCTGTCCATCCTTAAGCCAGATCATGGAGCCTCGTaGCAGGCAGAGGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PNASNAVLPMKGLSILKPDHGAS*QAEVAA
Trigger: GGCCGCTACCTCTGCCTGGCACGAGGCTCCATGATC...TGGCTTAAGGATGGACAGGCCTTTCATGGGGAGAACCGCATTGGAGGCATTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGTTCCCCGCAGGTACTaGATGCAGTTTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPVPRRY*MQFLLH
Trigger: ATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAAC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp AGCGGCCAGCATCCTCAGGTAGGAAGCTGGCAATCTCTAGGCGGCCCCTCCAGCGTTCCCCGCAGGTACTaGATGCAGTTTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SGQHPQVGSWQSLGGPSSVPRRY*MQFLLH
Trigger: ATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAAC...GCTGGAGGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGGATGCTGGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp AACTTGACGGTGTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGCGTGGGGTTGCCTaGAGCTGGACAGCGGAACTT +
Preference number: 4 (lower is better)
Translates to: NLTVFPAGTACSFFSMRWGRGVA*SWTAEL
Trigger: AAGTTCCGCTGTCCAGCTGCAGGCAACCCCACGCCC...CCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAGCCGAATGCCTCCAATaGGGTTCTCCCCATGAAAGG +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPAECLQ*GSPHER
Trigger: CCTTTCATGGGGAGAACCGCATTGGAGGCATTCGGC...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CACAGCAACTCTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCCGAATGCCTCCAATaGGGTTCTCCCCATGAAAGG +
Preference number: 4 (lower is better)
Translates to: HSNSGPGAPCYQGRALCQAECLQ*GSPHER
Trigger: CCTTTCATGGGGAGAACCGCATTGGAGGCATTCGGC...CTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAGAGTTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAGTTATAGCGGATGCTaGCCACAGCGTTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: QGPHAIKVEHCVRLWLSPSYSGC*PQRSLP
Trigger: TGGTAGAGAACGCTGTGGGCAGCATCCGCTATAACT...GGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCCGTTGATGACGATGTaGTTCAGCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHPLMTM*FSHWMW
Trigger: CCACATCCAGTGGCTGAAGCACATCGTCATCAACGG...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCGTTGATGACGATGTaGTTCAGCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: APCYQGRALCQAVAEPQGPLMTM*FSHWMW
Trigger: CCACATCCAGTGGCTGAAGCACATCGTCATCAACGG...GCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGAGAGGCCGATGGAATTaGCTGCGAGGCAGGTGTACT +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRRGRWN*LRGRCT
Trigger: AGTACACCTGCCTCGCAGGCAATTCCATCGGCCTCT...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCACACAGCCTTGAGCCTTaGTCATGTCTGCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: PCYQGRALCQAVAEPQGPHSLEP*SCLHPR
Trigger: TCTGGGGTGCAGACATGAGCAAGGCTCAAGGCTGTG...TGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCACCAGCCTATGTGCCTaGACAGCCTTGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GGSEAQNLLLVLGGRRFSTSLCA*TALSLA
Trigger: AGCAAGGCTCAAGGCTGTGCAGGCACATAGGCTGGT...GCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGACCAGCCTATGTGCCTaGACAGCCTTGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRTSLCA*TALSLA
Trigger: AGCAAGGCTCAAGGCTGTGCAGGCACATAGGCTGGT...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp TCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAATCTGCAGGACGATCATaGAGCCTCGTGCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SAKPGMGTKRQGPRSRAESAGRS*SLVPGR
Trigger: TCTGCCTGGCACGAGGCTCCATGATCGTCCTGCAGA...TTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAGCTCTCGGTAGGAGAGGCCGATaGAATTGCCTGCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AQNLLLVLGGRRFSIAALGRRGR*NCLRGR
Trigger: CCTGCCTCGCAGGCAATTCCATCGGCCTCTCCTACC...GAGAGCTGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAATCTGCACGTACTACCTaGCCAAAGCAGCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SAKPGMGTKRQGPRSRAESARTT*PKQPSP
Trigger: AGGCGAGGGCTGCTTTGGCCAGGTAGTACGTGCAGA...TTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp AGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCCAGGCAGGCGGCCGTTGCTaGTTTTCTTATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: SSKGKGTALGHGTATLGQAGGRC*FSYSSQ
Trigger: TTGACTACTATAAGAAAACCAGCAACGGCCGCCTGC...CTGGCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGCAGGCGGCCGTTGCTaGTTTTCTTATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: ARQLQGQGHGPWTRHSNSAGGRC*FSYSSQ
Trigger: TTGACTACTATAAGAAAACCAGCAACGGCCGCCTGC...AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TCCTGTTTTCGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTAATGGCAGGGGGTCGTaGCTGAAGACAGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: SCFRQASSFSGLRGQCSRNGRGS*LKTESL
Trigger: CAGCGATTCTGTCTTCAGCCACGACCCCCTGCCATT...ACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCGAAAACAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAAATGGCAGGGGGTCGTaGCTGAAGACAGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPNGRGS*LKTESL
Trigger: CAGCGATTCTGTCTTCAGCCACGACCCCCTGCCATT...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CCA 90 bp GCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGCAAGGGCACGGCCCTTaGACACGGCACAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: AKVQEAEQNPDIWAIRTQQGHGP*TRHSNS
Trigger: AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTG...CTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCTTGGTTCTGCCTGCTaGAGTCAGGCTGTCACATGT +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGLGSAC*SQAVTC
Trigger: ACATGTGACAGCCTGACTCCAGCAGGCAGAACCAAG...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR CCA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACGCAAAGTGGGAGACTTaGTTCTGCCTGCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHAKWET*FCLLES
Trigger: TGACTCCAGCAGGCAGAACCAAGTCTCCCACTTTGC...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR TCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGATGCGGTTCTCCCCATaGAAGGCCTGTCCATCCTTA +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRMRFSP*KACPSL
Trigger: TAAGGATGGACAGGCCTTTCATGGGGAGAACCGCAT...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp AGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGGCACGTGCCTGCACAGCCTTaGGCCTTGCTCATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RSKKPSRTLTFGPSGHRHVPAQP*ALLMSA
Trigger: TGCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCAC...GTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGGGTCCTCATCATCGTTaGTGGAGGTCAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRGPHHR*WRSRSH
Trigger: GTGACTCCTTGACCTCCAGCAACGATGATGAGGACC...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACGTGTGTCCAGTAGGGTaGTTGCTGGGGGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: APRSKKPSRTLTFGPSGHVCPVG*LLGVTV
Trigger: CACAGTTACCCCCAGCAAGCACCCTACTGGACACAC...GTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp TGTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCGTGTGTCCAGTAGGGTaGTTGCTGGGGGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: CSPQVLHAVSSPCAGGVSVCPVG*LLGVTV
Trigger: CACAGTTACCCCCAGCAAGCACCCTACTGGACACAC...GGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGCAGTTTCTTCTCCATaGGCTGGGGGTGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQAVSSP*AGGVSS
Trigger: ACTGGACACACCCCCAGCGCATGGAGAAGAAACTGC...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCGTTCCCCGCAGGTACTaGATGCAGTTTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: APCYQGRALCQAVAEPQGVPRRY*MQFLLH
Trigger: ATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAAC...GCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGGTTCCCCGCAGGTACTaGATGCAGTTTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: AQPNPGWGLSAKVQEAEQVPRRY*MQFLLH
Trigger: ATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAAC...CTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAAGTTATAGCGGATGCTaGCCACAGCGTTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: GSAKPGMGTKRQGPRSRASYSGC*PQRSLP
Trigger: TGGTAGAGAACGCTGTGGGCAGCATCCGCTATAACT...TGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCGGTAGTTATAGCGGATaGTGCCCACAGCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGGSYSG*CPQRSL
Trigger: TAGAGAACGCTGTGGGCAGCATCCGCTATAACTACC...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGAGACTTGGTTCTGCCTaGTGGAGTCAGGCTGTCACA +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRRLGSA*WSQAVT
Trigger: TGTGACAGCCTGACTCCAGCAGGCAGAACCAAGTCT...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR CCA 90 bp AGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGGCACTCTGCAGGACGATCATaGAGCCTCGTGCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSKKPSRTLTFGPSGHRHSAGRS*SLVPGR
Trigger: TCTGCCTGGCACGAGGCTCCATGATCGTCCTGCAGA...GTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCATACAGGGGCCCTTCCTaGGTGCAGACACCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SEAQNLLLVLGGRRFSIAYRGPS*VQTPSR
Trigger: CCTGCTTGGTGTCTGCACCCAGGAAGGGCCCCTGTA...TGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCCCCAGAACCTCCTGCTaGTATTGGGAGGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GLSAKVQEAEQNPDIWAIPRTSC*YWEAGG
Trigger: ACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGG...GATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAACAGGACCTCCACCTCTaGGCTATTGATGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQQDLHL*AIDVCS
Trigger: ACTGCAGACATCAATAGCTCAGAGGTGGAGGTCCTG...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR TCA 90 bp AGCGGCCAGCATCCTCAGGTAGGAAGCTGGCAATCTCTAGGCGGCCCCTCCAGCAGACACAGTGATAGATaGATGCTTGCAAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: SGQHPQVGSWQSLGGPSSRHSDR*MLASST
Trigger: AGTGGAGCTTGCAAGCATTCATCTATCACTGTGTCT...GCTGGAGGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGGATGCTGGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCAGTAGGGGTCCTCATCATCGTTaGTGGAGGTCAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PQVLHAVSSPCAGGVSSRGPHHR*WRSRSH
Trigger: GTGACTCCTTGACCTCCAGCAACGATGATGAGGACC...CCTACTGGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp ATCGTTGCTGGAGGTCAAGGAGTCACCTGTAATCAAGGTGAGATTCTGCAGGACTGGTGGGCGTGGGGTTaGCTGCAGCTGGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: IVAGGQGVTCNQGEILQDWWAWG*LQLDSG
Trigger: TCCGCTGTCCAGCTGCAGGCAACCCCACGCCCACCA...GTCCTGCAGAATCTCACCTTGATTACAGGTGACTCCTTGACCTCCAGCAACGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp AGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGGCACGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: RSKKPSRTLTFGPSGHRHGMSLT*RKSLTP
Trigger: TGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCC...GTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAACATGCCAAAGGCCTCTaGACGTACTACCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQHAKGL*TYYLAK
Trigger: TTTGGCCAGGTAGTACGTGCAGAGGCCTTTGGCATG...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCAGGCAGGCGGCCGTTaGTGGTTTTCTTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRQAGGR*WFSYSS
Trigger: ACTACTATAAGAAAACCAGCAACGGCCGCCTGCCTG...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGACCAGCCTATGTGCCTaGACAGCCTTGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AKVQEAEQNPDIWAIRTQTSLCA*TALSLA
Trigger: AGCAAGGCTCAAGGCTGTGCAGGCACATAGGCTGGT...CTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp GCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACCCTCATCATCGTTGCTaGAGGTCAAGGAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: APRSKKPSRTLTFGPSGHPHHRC*RSRSHL
Trigger: CAGGTGACTCCTTGACCTCCAGCAACGATGATGAGG...GTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp CTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGGGTCCCTATGGGACTTaGGGTCCTCATCATCGTTGC +
Preference number: 4 (lower is better)
Translates to: LSAKVQEAEQNPDIWAIRGPYGT*GPHHRC
Trigger: GCAACGATGATGAGGACCCCAAGTCCCATAGGGACC...CCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp AGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGGCACAATGGCAGGGGGTCGTaGCTGAAGACAGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: RSKKPSRTLTFGPSGHRHNGRGS*LKTESL
Trigger: CAGCGATTCTGTCTTCAGCCACGACCCCCTGCCATT...GTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR TCA 90 bp GGGTCCCTATGGGACTTGGGGTCCTCATCATCGTTGCTGGAGGTCAAGGAGTCAATGCGGTTCTCCCCATaGAAGGCCTGTCCATCCTTA +
Preference number: 4 (lower is better)
Translates to: GSLWDLGSSSSLLEVKESMRFSP*KACPSL
Trigger: TAAGGATGGACAGGCCTTTCATGGGGAGAACCGCAT...TGACTCCTTGACCTCCAGCAACGATGATGAGGACCCCAAGTCCCATAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAATCAAGGTGAGATTCTaGAGGACGATCATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PCYQGRALCQAVAEPQGPIKVRF*RTIMEP
Trigger: AGGCTCCATGATCGTCCTGCAGAATCTCACCTTGAT...TGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAGCTCTCGGTCCTCATCATCGTTaGTGGAGGTCAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: AQNLLLVLGGRRFSIAALGPHHR*WRSRSH
Trigger: GTGACTCCTTGACCTCCAGCAACGATGATGAGGACC...GAGAGCTGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp AACTTGACGGTGTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGCAGTTTCTTCTCCATaGGCTGGGGGTGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: NLTVFPAGTACSFFSMRWAVSSP*AGGVSS
Trigger: ACTGGACACACCCCCAGCGCATGGAGAAGAAACTGC...CCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAAGTTATAGCGGATGCTaGCCACAGCGTTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQSYSGC*PQRSLP
Trigger: TGGTAGAGAACGCTGTGGGCAGCATCCGCTATAACT...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAACAGGCAGGCGGCCGTTaGTGGTTTTCTTATAGTAGT +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQQAGGR*WFSYSS
Trigger: ACTACTATAAGAAAACCAGCAACGGCCGCCTGCCTG...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGACTCCAGGGAGAACTaGAAAGTGGGAGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQDSREN*KVGDLV
Trigger: AACCAAGTCTCCCACTTTGCAGTTCTCCCTGGAGTC...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS-3UTR CCA 90 bp AACTTGACGGTGTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGTCCCTATGGGACTTaGGGTCCTCATCATCGTTGC +
Preference number: 4 (lower is better)
Translates to: NLTVFPAGTACSFFSMRWGPYGT*GPHHRC
Trigger: GCAACGATGATGAGGACCCCAAGTCCCATAGGGACC...CCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CCA 90 bp GACTTGGGGTCCTCATCATCGTTGCTGGAGGTCAAGGAGTCACCTGTAATCAAGGGGGTTGCCTGCAGCTaGACAGCGGAACTTGACGGT +
Preference number: 4 (lower is better)
Translates to: DLGSSSSLLEVKESPVIKGVACS*TAELDG
Trigger: ACCGTCAAGTTCCGCTGTCCAGCTGCAGGCAACCCC...CTTGATTACAGGTGACTCCTTGACCTCCAGCAACGATGATGAGGACCCCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CCA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAGCAGGCGGCCGTTGCTaGTTTTCTTATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPAGGRC*FSYSSQ
Trigger: TTGACTACTATAAGAAAACCAGCAACGGCCGCCTGC...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
3UTR CAA 72 bp GAGGGGTCCCTATGGGACTTGGGGTCCTCATCATCGTaGCTGGAGGTCAAGGAGTCACCTGTAATCAAGGTG +
Preference number: 4 (lower is better)
Translates to: EGSLWDLGSSSS*LEVKESPVIKV
Trigger: CACCTTGATTACAGGTGACTCCTTGACCTCCAGCAACGATGATGAGGACCCCAAGTCCCATAGGGACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR GCA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAATCAAGGTGAGATTCTaGAGGACGATCATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQIKVRF*RTIMEP
Trigger: AGGCTCCATGATCGTCCTGCAGAATCTCACCTTGAT...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR GCA 90 bp GCGCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACATCAAGGTGAGATTCTaGAGGACGATCATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: APRSKKPSRTLTFGPSGHIKVRF*RTIMEP
Trigger: AGGCTCCATGATCGTCCTGCAGAATCTCACCTTGAT...GTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGGGTAGTTATAGCGGATaGTGCCCACAGCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: AKVQEAEQNPDIWAIRTQGSYSG*CPQRSL
Trigger: TAGAGAACGCTGTGGGCAGCATCCGCTATAACTACC...CTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAGCTCTCGGTAGTTATAGCGGATaGTGCCCACAGCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: AQNLLLVLGGRRFSIAALGSYSG*CPQRSL
Trigger: TAGAGAACGCTGTGGGCAGCATCCGCTATAACTACC...GAGAGCTGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CCA 90 bp TCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAACCTCCTGCTGGTATTaGGAGGCAGGAGGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SEAQNLLLVLGGRRFSIATSCWY*EAGGLA
Trigger: TGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGT...TGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR GCA 90 bp GACTTGGGGTCCTCATCATCGTTGCTGGAGGTCAAGGAGTCACCTGTAATCAAGCCCGCAGGTACTGCATaGAGTTTCTTCTCCATGCGC +
Preference number: 4 (lower is better)
Translates to: DLGSSSSLLEVKESPVIKPAGTA*SFFSMR
Trigger: GCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGG...CTTGATTACAGGTGACTCCTTGACCTCCAGCAACGATGATGAGGACCCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS GCA 90 bp TTCTGCACAGTGGCGGGCGGGCGGGGGTGCCGGCCGTGGAGCGCCTaGCCTCGATACAGCCCGGCCAGCAGCAGGAGCACAGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: FCTVAGGRGCRPWSA*PRYSPASSRSTAKA
Trigger: GGCCTTGGCTGTGCTCCTGCTGCTGGCCGGGCTGTATCGAGGGCAGGCGCTCCACGGCCGGCACCCCCGCCCGCCCGCCACTGTGCAGAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292408.9
ENST00000502906.5
ENST00000508139.1
ENST00000511076.1
CDS CCA 90 bp CGGGAGAGCTTCTGCACAGTGGCGGGCGGGCGGGGGTGCCGGCCGTaGAGCGCCTGCCCTCGATACAGCCCGGCCAGCAGCAGGAGCACA +
Preference number: 5 (lower is better)
Translates to: RESFCTVAGGRGCRP*SACPRYSPASSRST
Trigger: TGTGCTCCTGCTGCTGGCCGGGCTGTATCGAGGGCAGGCGCTCCACGGCCGGCACCCCCGCCCGCCCGCCACTGTGCAGAAGCTCTCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292408.9
ENST00000502906.5
ENST00000508139.1
ENST00000511076.1
CDS-3UTR CAA 90 bp CTGGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGACCACGGCTGTGGTGTaGGCCGGGAGCCCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LGQGPHAIKVEHCVRLWLTTAVV*AGSPAC
Trigger: GCAGGCCGGGCTCCCGGCCAACACCACAGCCGTGGT...CAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGACCACGGCTGTGGTGTaGGCCGGGAGCCCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQTTAVV*AGSPAC
Trigger: GCAGGCCGGGCTCCCGGCCAACACCACAGCCGTGGT...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS CCA 90 bp GTGCGGAAAGCAGGCTGGCGCCCTGGGGTCTGTTTGACCAGGGCCTaGCTTCCAACTGGCCTGGGAATTCAGGGAGCTGGCGGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: VRKAGWRPGVCLTRA*LPTGLGIQGAGGRP
Trigger: CGGCCTGCCGCCAGCTCCCTGAATTCCCAGGCCAGTTGGAAGCCAGGCCCTGGTCAAACAGACCCCAGGGCGCCAGCCTGCTTTCCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CCA 90 bp GAAGGAAGGAAGCTGCCGCTGGAGGGGTCAGCGGTAGTCCCCGCATaGGGTCAGAGCTTCTGGGTGCGGAAAGCAGGCTGGCGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: EGRKLPLEGSAVVPA*GQSFWVRKAGWRPG
Trigger: CCCAGGGCGCCAGCCTGCTTTCCGCACCCAGAAGCTCTGACCCCATGCGGGGACTACCGCTGACCCCTCCAGCGGCAGCTTCCTTCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS-3UTR CAA 90 bp GGGAAAGGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGACCACGGCTGTGGTGTaGGCCGGGAGCCCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GKGGSEAQNLLLVLGGRRTTAVV*AGSPAC
Trigger: GCAGGCCGGGCTCCCGGCCAACACCACAGCCGTGGT...CCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCCTTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CAGCTCTCCAGCCAGGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCGGCCACAGTGCTGGCTaGGTCAGGCCGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QLSSQAQPNPGWGLSAKVGHSAG*VRPGRV
Trigger: GACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGCC...GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCCTGGCTGGAGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS GCA 90 bp GCCCGACGCGTACAGGATGATGTCCGTATACCTGGCCTCGGGCGCTaGTGCGGTCCATGTGGGGTCCTCCTCTGGCAGCACCGTGAGCCA +
Preference number: 5 (lower is better)
Translates to: ARRVQDDVRIPGLGR*CGPCGVLLWQHREP
Trigger: TGGCTCACGGTGCTGCCAGAGGAGGACCCCACATGGACCGCAGCAGCGCCCGAGGCCAGGTATACGGACATCATCCTGTACGCGTCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000502906.5
ENST00000508139.1
CDS-3UTR CAA 90 bp GGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGGCCACAGTGCTGGCTaGGTCAGGCCGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GSAKPGMGTKRQGPRSRAGHSAG*VRPGRV
Trigger: GACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGCC...TGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACGGCCACAGTGCTGGCTaGGTCAGGCCGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHGHSAG*VRPGRV
Trigger: GACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGCC...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAACGGCCAGCAGGACCTaGTCCAGCGCCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPTASRT*SSASTS
Trigger: GCTGGTGGAGGCGCTGGACAAGGTCCTGCTGGCCGT...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp CAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCACGGCCAGCAGGACCTaGTCCAGCGCCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: QGPHAIKVEHCVRLWLSPTASRT*SSASTS
Trigger: GCTGGTGGAGGCGCTGGACAAGGTCCTGCTGGCCGT...GGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp GCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGCAAGGGCACGGCCCTaGGACACGGCACAGCAACTC +
Preference number: 5 (lower is better)
Translates to: ARQLQGQGHGPWTRHSNSARARP*DTAQQL
Trigger: GAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGC...AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS GCA 90 bp CGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCAGGGAGAACTGGCCTCGGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: RWRRDARLVPGMSLT*RKSLTPGRTGLGRC
Trigger: GCAGCGCCCGAGGCCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS CCA 90 bp GCAGGGCTCAAGCTCCACTTCCTCAGAGGCCTCCAGGGACAAGACTaGAGGCCCAGGCACACTCAGCAGGACCCCCAACAGGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: AGLKLHFLRGLQGQD*RPRHTQQDPQQGQQ
Trigger: CTGCTGGCCCTGTTGGGGGTCCTGCTGAGTGTGCCTGGGCCTCCAGTCTTGTCCCTGGAGGCCTCTGAGGAAGTGGAGCTTGAGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000426612.5
ENST00000502906.5
ENST00000503708.5
ENST00000509511.5
ENST00000510911.5
ENST00000513166.1
ENST00000514472.1
CDS GCA 90 bp CACAGACGCACAGGCTGCCCAAGGGCTACTGTCAGCTCCTGCTCTTaGTGCTCCAGGCTGGGAGCCAGGCAGGGCTCAAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: HRRTGCPRATVSSCS*CSRLGARQGSSSTS
Trigger: GGAAGTGGAGCTTGAGCCCTGCCTGGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGACAGTAGCCCTTGGGCAGCCTGTGCGTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000426612.5
ENST00000502906.5
ENST00000503708.5
ENST00000509511.5
ENST00000510911.5
ENST00000513166.1
ENST00000514472.1
CDS GCA 90 bp GTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCCTATGTaGCTGCACAGCCTTGAGCCTTGCTCATGTCTGCACCCCAGACCC +
Preference number: 5 (lower is better)
Translates to: VRLWLSPKAQGHQPM*LHSLEPCSCLHPRP
Trigger: GGGTCTGGGGTGCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCACATAGGCTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000513423.1
CDS CCA 90 bp GAGGTAGATCTAGACTCACGAGGCCGGCGAGCAAGGCGGGGCCGCTaGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTTGC +
Preference number: 5 (lower is better)
Translates to: EVDLDSRGRRARRGR*RRDARLVPGMSLTC
Trigger: GCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGGCCCCGCCTTGCTCGCCGGCCTCGTGAGTCTAGATCTACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000502906.5
ENST00000511076.1
CDS CCA 90 bp CCAGACCCGAAGGGGAAGGAGCTGGATCCCAATGGCAGGGGGTCGTaGCTGAAGACAGAATCGCTGGAGGAGCAGGTGCTGCTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: PDPKGKELDPNGRGS*LKTESLEEQVLLAS
Trigger: GGACGCCAGCAGCACCTGCTCCTCCAGCGATTCTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCCTTCCCCTTCGGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000513423.1
CDS CCA 90 bp CGCATGGGGTCAGAGCTTCTGGGTGCGGAAAGCAGGCTGGCGCCCTaGGGTCTGTTTGACCAGGGCCTGGCTTCCAACTGGCCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: RMGSELLGAESRLAP*GLFDQGLASNWPGN
Trigger: ATTCCCAGGCCAGTTGGAAGCCAGGCCCTGGTCAAACAGACCCCAGGGCGCCAGCCTGCTTTCCGCACCCAGAAGCTCTGACCCCATGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS-3UTR CAA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGTGTCAGCTCCTGCTCTaGCTGCTCCAGGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQCQLLL*LLQAGS
Trigger: GCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGACA...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp GCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCAGGCGACTGCCCTCCTaGTACCAGTGGCCACCACGC +
Preference number: 5 (lower is better)
Translates to: APCYQGRALCQAVAEPQGRRLPS*YQWPPR
Trigger: GCGTGGTGGCCACTGGTACAAGGAGGGCAGTCGCCT...GCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCTGGACAGCGGAACTaGACGGTGTTCCCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPAGQRN*TVFPAG
Trigger: ACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAGC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp CAGCTCTCCAGCCAGGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCGCTGGACAGCGGAACTaGACGGTGTTCCCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: QLSSQAQPNPGWGLSAKVAGQRN*TVFPAG
Trigger: ACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAGC...GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCCTGGCTGGAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp GGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCACGGCCAGCAGGACCTaGTCCAGCGCCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GGSEAQNLLLVLGGRRFSTASRT*SSASTS
Trigger: GCTGGTGGAGGCGCTGGACAAGGTCCTGCTGGCCGT...GCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS TCA 90 bp AGAGCTTCTGGGTGCGGAAAGCAGGCTGGCGCCCTGGGGTCTGTTTaGCCAGGGCCTGGCTTCCAACTGGCCTGGGAATTCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RASGCGKQAGALGSV*PGPGFQLAWEFREL
Trigger: CAGCTCCCTGAATTCCCAGGCCAGTTGGAAGCCAGGCCCTGGTCAAACAGACCCCAGGGCGCCAGCCTGCTTTCCGCACCCAGAAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS GCA 90 bp CGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCAGGGAGAACTGTCGGGCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: RWRRDARLVPGMSLT*RKSLTPGRTVGPEG
Trigger: TCCCTCTGGCCCGACAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000502906.5
CDS GCA 90 bp AGCAGACGGGGTGAAGAGGCTGCCCTCCAACTGCACGAGGGAGCATaGAGAGGCAGGTGCAGGACAAGCAGCACTGGACCAGGGCTACGT +
Preference number: 5 (lower is better)
Translates to: SRRGEEAALQLHEGA*RGRCRTSSTGPGLR
Trigger: ACGTAGCCCTGGTCCAGTGCTGCTTGTCCTGCACCTGCCTCTGCATGCTCCCTCGTGCAGTTGGAGGGCAGCCTCTTCACCCCGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CCA 90 bp CAGCAGCAGCCGCATCTCCTTCTCACAGCTCTCAGGGACCCAAGCTaGACTTCCCACCAACTGCCTTCCTCGAGCCTGCGTGACTCCGCG +
Preference number: 5 (lower is better)
Translates to: QQQPHLLLTALRDPS*TSHQLPSSSLRDSA
Trigger: CGCGGAGTCACGCAGGCTCGAGGAAGGCAGTTGGTGGGAAGTCCAGCTTGGGTCCCTGAGAGCTGTGAGAAGGAGATGCGGCTGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS CCA 90 bp GGAGACTTGGTTCTGCCTGCTGGAGTCAGGCTGTCACATGTGAGGTaGGGGATGCGCCCAGTACCTGTCGGGCCAGAGGGAAGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: GDLVLPAGVRLSHVR*GMRPVPVGPEGSGR
Trigger: TCTCCCGCTTCCCTCTGGCCCGACAGGTACTGGGCGCATCCCCCACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAACCAAGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508139.1
CDS-3UTR CAA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCAAGGCGACTGCCCTCCTaGTACCAGTGGCCACCACGC +
Preference number: 5 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPRRLPS*YQWPPR
Trigger: GCGTGGTGGCCACTGGTACAAGGAGGGCAGTCGCCT...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCGCTGGACAGCGGAACTaGACGGTGTTCCCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGAGQRN*TVFPAG
Trigger: ACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAGC...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp GCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGCATCGCTGTACACCTaGCACAGCAGCTCCACGTCG +
Preference number: 5 (lower is better)
Translates to: AGFQLLWAQGPMLPSRRWASLYT*HSSSTS
Trigger: CGACGTGGAGCTGCTGTGCAAGGTGTACAGCGATGC...CCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CAA 90 bp AGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGGGCCAGCCGAAGCTGCTGCCGTaGATGACGATGTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSKGKGTALGHGTATLGQPKLLP*MTMCFS
Trigger: GCTGAAGCACATCGTCATCAACGGCAGCAGCTTCGG...CTGGCCCAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGGAGAGGCCGATGGAATaGCCTGCGAGGCAGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LPASLGSGANAPVKTLGQERPME*PARQVY
Trigger: GTACACCTGCCTCGCAGGCAATTCCATCGGCCTCTC...CTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CAA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGAGAGGCCGATGGAATaGCCTGCGAGGCAGGTGTAC +
Preference number: 5 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPERPME*PARQVY
Trigger: GTACACCTGCCTCGCAGGCAATTCCATCGGCCTCTC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp GCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCC +
Preference number: 5 (lower is better)
Translates to: ARQLQGQGHGPWTRHSNSRDELD*PEEPDS
Trigger: GGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCT...AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp GCACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTAGGTCGGCCAGGTCCTaGTCAGAGGCGTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: ARQLQGQGHGPWTRHSNSRSARS*SEALSL
Trigger: CAAAGACAACGCCTCTGACAAGGACCTGGCCGACCT...AGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACGCAAGGGCACGGCCCTaGGACACGGCACAGCAACTC +
Preference number: 5 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNARARP*DTAQQL
Trigger: GAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGC...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS TCA 90 bp AAGTGGGAGACTTGGTTCTGCCTGCTGGAGTCAGGCTGTCACATGTaGGGTGGGGGATGCGCCCAGTACCTGTCGGGCCAGAGGGAAGCG +
Preference number: 5 (lower is better)
Translates to: KWETWFCLLESGCHM*GGGCAQYLSGQREA
Trigger: CGCTTCCCTCTGGCCCGACAGGTACTGGGCGCATCCCCCACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAACCAAGTCTCCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508139.1
CDS GCA 90 bp GCCACCAGCCTATGTGCCTGCACAGCCTTGAGCCTTGCTCATGTCTaGACCCCAGACCCGAAGGGGAAGGAGCTGGATCCCAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: ATSLCACTALSLAHV*TPDPKGKELDPNGR
Trigger: CCTGCCATTGGGATCCAGCTCCTTCCCCTTCGGGTCTGGGGTGCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCACATAGGCTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000513423.1
CDS GCA 90 bp AAGGCCCAAGGCCACCAGCCTATGTGCCTGCACAGCCTTGAGCCTTaGTCATGTCTGCACCCCAGACCCGAAGGGGAAGGAGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: KAQGHQPMCLHSLEP*SCLHPRPEGEGAGS
Trigger: GGATCCAGCTCCTTCCCCTTCGGGTCTGGGGTGCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCACATAGGCTGGTGGCCTTGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000513423.1
CDS GCA 90 bp GAAGAGGCTGCCCTCCAACTGCACGAGGGAGCATGCAGAGGCAGGTaGAGGACAAGCAGCACTGGACCAGGGCTACGTAGGTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: EEAALQLHEGACRGR*RTSSTGPGLRRSRA
Trigger: AGCCCTAGACCTACGTAGCCCTGGTCCAGTGCTGCTTGTCCTGCACCTGCCTCTGCATGCTCCCTCGTGCAGTTGGAGGGCAGCCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CCA 90 bp AATGCTTGCAAGCTCCACTTCCTCAGAGGCCTCCAGGGACAAGACTaGAGGCCCAGGCACACTCAGCAGGACCCCCAACAGGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: NACKLHFLRGLQGQD*RPRHTQQDPQQGQQ
Trigger: CTGCTGGCCCTGTTGGGGGTCCTGCTGAGTGTGCCTGGGCCTCCAGTCTTGTCCCTGGAGGCCTCTGAGGAAGTGGAGCTTGCAAGCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CAA 90 bp GGCCAGCATCCTCAGGTAGGAAGCTGGCAATCTCTAGGCGGCCCCTCCAGCCCCGGGTCCTCATCATCGTaGCTGGAGGTCAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: GQHPQVGSWQSLGGPSSPGSSSS*LEVKES
Trigger: TGACTCCTTGACCTCCAGCAACGATGATGAGGACCC...GGGGCTGGAGGGGCCGCCTAGAGATTGCCAGCTTCCTACCTGAGGATGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CAA 90 bp CAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCTGTCCAGTAGGGTGCTaGCTGGGGGTAACTGTGCCT +
Preference number: 5 (lower is better)
Translates to: QGPHAIKVEHCVRLWLSPCPVGC*LGVTVP
Trigger: AGGCACAGTTACCCCCAGCAAGCACCCTACTGGACA...GGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACGCATCGCTGTACACCTaGCACAGCAGCTCCACGTCG +
Preference number: 5 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHASLYT*HSSSTS
Trigger: CGACGTGGAGCTGCTGTGCAAGGTGTACAGCGATGC...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp CTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGCCGAAGCTGCTGCCGTaGATGACGATGTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LPASLGSGANAPVKTLGQPKLLP*MTMCFS
Trigger: GCTGAAGCACATCGTCATCAACGGCAGCAGCTTCGG...CTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CAA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGCCGAAGCTGCTGCCGTaGATGACGATGTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQPKLLP*MTMCFS
Trigger: GCTGAAGCACATCGTCATCAACGGCAGCAGCTTCGG...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp GGGCCAGGGGCCCCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GPGAPCYQGRALCQAVAEVPGMS*TCRKSL
Trigger: CAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTAC...CTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGGGGCCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CAGCTCTCCAGCCAGGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCAGGTCGGCCAGGTCCTaGTCAGAGGCGTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: QLSSQAQPNPGWGLSAKVRSARS*SEALSL
Trigger: CAAAGACAACGCCTCTGACAAGGACCTGGCCGACCT...GACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCCTGGCTGGAGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp AAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGTGTGCCTGCACAGCCTaGAGCCTTGCTCATGTCTGC +
Preference number: 5 (lower is better)
Translates to: KVEHCVRLWLSPKAQGHQCACTA*SLAHVC
Trigger: GCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCACA...CTGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS GCA 90 bp GGTGCGGGGACCGCTCCAGCACATCTAGCAGGTAGTTATAGCGGATaGTGCCCACAGCGTTCTCTACCAGGCAGGTGTATGTGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: GAGTAPAHLAGSYSG*CPQRSLPGRCMCRG
Trigger: ACCGCGGCACATACACCTGCCTGGTAGAGAACGCTGTGGGCAGCATCCGCTATAACTACCTGCTAGATGTGCTGGAGCGGTCCCCGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000509511.5
CDS GCA 90 bp TTGTCTGTAAGGGCAGCAGACGGGGTGAAGAGGCTGCCCTCCAACTaGACGAGGGAGCATGCAGAGGCAGGTGCAGGACAAGCAGCACTG +
Preference number: 5 (lower is better)
Translates to: LSVRAADGVKRLPSN*TREHAEAGAGQAAL
Trigger: CAGTGCTGCTTGTCCTGCACCTGCCTCTGCATGCTCCCTCGTGCAGTTGGAGGGCAGCCTCTTCACCCCGTCTGCTGCCCTTACAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CCA 90 bp AGTTATGCCCAGTCCCAGGCACCCACACCTCAGCAGACGGTCACATaGACGGCCACGTGTGGAGAGGCACAGAGGGGCTGTCATACAGCT +
Preference number: 5 (lower is better)
Translates to: SYAQSQAPTPQQTVT*TATCGEAQRGCHTA
Trigger: AGCTGTATGACAGCCCCTCTGTGCCTCTCCACACGTGGCCGTCCATGTGACCGTCTGCTGAGGTGTGGGTGCCTGGGACTGGGCATAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509511.5
CDS CCA 90 bp CAGCAGCAGCCGCATCTCCTTCTCACAGCTCTCAGGGACCCAAGCTaGACTTCCCACCAACTGCCTTCCTCCTCCTCCTTGGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: QQQPHLLLTALRDPS*TSHQLPSSSSLVTA
Trigger: GGCAGTGACCAAGGAGGAGGAGGAAGGCAGTTGGTGGGAAGTCCAGCTTGGGTCCCTGAGAGCTGTGAGAAGGAGATGCGGCTGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510911.5
CDS-3UTR CAA 90 bp GTTCCCCGCAGGTACTGCATGCAGTTTCTTCTCCATGCGCTGGGGGTGTGTCCATGTCAGCTCCTGCTCTaGCTGCTCCAGGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: VPRRYCMQFLLHALGVCPCQLLL*LLQAGS
Trigger: GCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGACA...TGGACACACCCCCAGCGCATGGAGAAGAAACTGCATGCAGTACCTGCGGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CAA 90 bp CTTCCAGCTTCTCTGGGCTCAGGGGCCAATGCTCCCGTCAAGACGCTGGGGCAGGGGTCCTCATCATCGTaGCTGGAGGTCAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: LPASLGSGANAPVKTLGQGSSSS*LEVKES
Trigger: TGACTCCTTGACCTCCAGCAACGATGATGAGGACCC...CTGCCCCAGCGTCTTGACGGGAGCATTGGCCCCTGAGCCCAGAGAAGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CAA 90 bp CAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACCAGGGTCCTCATCATCGTaGCTGGAGGTCAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: QGRALCQAVAEPQGPRPPGSSSS*LEVKES
Trigger: TGACTCCTTGACCTCCAGCAACGATGATGAGGACCC...TGGTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp GCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGGGGTCCCTATGGGACTaGGGGTCCTCATCATCGTTG +
Preference number: 5 (lower is better)
Translates to: AQPNPGWGLSAKVQEAEQGSLWD*GSSSSL
Trigger: CAACGATGATGAGGACCCCAAGTCCCATAGGGACCC...CTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp GGGTTGCCTGCAGCTGGACAGCGGAACTTGACGGTGTTCCCCGCAGGTACTGCAGGGTCCCTATGGGACTaGGGGTCCTCATCATCGTTG +
Preference number: 5 (lower is better)
Translates to: GLPAAGQRNLTVFPAGTAGSLWD*GSSSSL
Trigger: CAACGATGATGAGGACCCCAAGTCCCATAGGGACCC...TGCAGTACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAGCTGCAGGCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CAA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACGCATCGCTGTACACCTaGCACAGCAGCTCCACGTCG +
Preference number: 5 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNASLYT*HSSSTS
Trigger: CGACGTGGAGCTGCTGTGCAAGGTGTACAGCGATGC...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACGAGAGGCCGATGGAATaGCCTGCGAGGCAGGTGTAC +
Preference number: 5 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNERPME*PARQVY
Trigger: GTACACCTGCCTCGCAGGCAATTCCATCGGCCTCTC...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp GCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCC +
Preference number: 5 (lower is better)
Translates to: AIKVEHCVRLWLSPKAQGRDELD*PEEPDS
Trigger: GGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCT...GCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHVPGMS*TCRKSL
Trigger: CAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTAC...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp GGCTCAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GSAKPGMGTKRQGPRSRAVPGMS*TCRKSL
Trigger: CAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTAC...TGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CACGGCAGCTCCAAGGGCAAGGGCACGGCCCTTGGACACGGCACAGCAACTCTGTCAGAGGCGTTGTCTTaGAGCATCTTGACGGCCACA +
Preference number: 5 (lower is better)
Translates to: HGSSKGKGTALGHGTATLSEALS*SILTAT
Trigger: TGTGGCCGTCAAGATGCTCAAAGACAACGCCTCTGA...CAGAGTTGCTGTGCCGTGTCCAAGGGCCGTGCCCTTGCCCTTGGAGCTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACAGGTCGGCCAGGTCCTaGTCAGAGGCGTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHRSARS*SEALSL
Trigger: CAAAGACAACGCCTCTGACAAGGACCTGGCCGACCT...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS GCA 90 bp CGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCAGGGAGAACTGCAAAGTGGGAGACT +
Preference number: 5 (lower is better)
Translates to: RWRRDARLVPGMSLT*RKSLTPGRTAKWET
Trigger: AGTCTCCCACTTTGCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS GCA 90 bp CTCCTTGGTCACTGCCACTCCACTTCCAGTCCATCTGGCTTCCCCTaGCCCTTCTCAAGGCAGGTCATGGCCATCTCTTGCATGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LLGHCHSTSSPSGFP*PFSRQVMAISCMGL
Trigger: GAGGCCCATGCAAGAGATGGCCATGACCTGCCTTGAGAAGGGGCAGGGGAAGCCAGATGGACTGGAAGTGGAGTGGCAGTGACCAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510911.5
CDS CCA 90 bp TCAGAGGCGTTGTCTTTGAGCATCTTGACGGCCACAGTGCTGGCTTaGTCAGGCCGGGCAGGGTCCATGCCAAAGGCCTCTGCACGTACT +
Preference number: 5 (lower is better)
Translates to: SEALSLSILTATVLA*SGRAGSMPKASART
Trigger: AGTACGTGCAGAGGCCTTTGGCATGGACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGCCGTCAAGATGCTCAAAGACAACGCCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000511076.1
CDS CCA 90 bp CCAGGCACCCACACCTCAGCAGACGGTCACATGGACGGCCACGTGTaGAGAGGCACAGAGGGGCTGTCATACAGCTCAAACCCACAAATC +
Preference number: 5 (lower is better)
Translates to: PGTHTSADGHMDGHV*RGTEGLSYSSNPQI
Trigger: GATTTGTGGGTTTGAGCTGTATGACAGCCCCTCTGTGCCTCTCCACACGTGGCCGTCCATGTGACCGTCTGCTGAGGTGTGGGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509511.5
CDS-3UTR CAA 90 bp CATTTGCTCCTGTTTTCGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGCCAATGTGTCAGCTCCTGCTCTaGCTGCTCCAGGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: HLLLFSAGFQLLWAQGPMCQLLL*LLQAGS
Trigger: GCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGACA...CATTGGCCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCGAAAACAGGAGCAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS-3UTR CAA 90 bp CCATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAGGGTCCCTATGGGACTaGGGGTCCTCATCATCGTTG +
Preference number: 5 (lower is better)
Translates to: PCYQGRALCQAVAEPQGPGSLWD*GSSSSL
Trigger: CAACGATGATGAGGACCCCAAGTCCCATAGGGACCC...TGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGGGGTCCCTATGGGACTaGGGGTCCTCATCATCGTTG +
Preference number: 5 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRGSLWD*GSSSSL
Trigger: CAACGATGATGAGGACCCCAAGTCCCATAGGGACCC...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp CAGCCAAACCCGGGATGGGGACTAAGCGCCAAGGTCCAAGAAGCCGAGCAGAACTGTCCAGTAGGGTGCTaGCTGGGGGTAACTGTGCCT +
Preference number: 5 (lower is better)
Translates to: QPNPGWGLSAKVQEAEQNCPVGC*LGVTVP
Trigger: AGGCACAGTTACCCCCAGCAAGCACCCTACTGGACA...GTTCTGCTCGGCTTCTTGGACCTTGGCGCTTAGTCCCCATCCCGGGTTTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGTGTCCAGTAGGGTGCTaGCTGGGGGTAACTGTGCCT +
Preference number: 5 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRCPVGC*LGVTVP
Trigger: AGGCACAGTTACCCCCAGCAAGCACCCTACTGGACA...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS CCA 90 bp CTTCCTCCTCCTCCTTGGTCACTGCCACTCCACTTCCAGTCCATCTaGCTTCCCCTGCCCCTTCTCAAGGCAGGTCATGGCCATCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPPPPWSLPLHFQSI*LPLPLLKAGHGHLL
Trigger: CAAGAGATGGCCATGACCTGCCTTGAGAAGGGGCAGGGGAAGCCAGATGGACTGGAAGTGGAGTGGCAGTGACCAAGGAGGAGGAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510911.5
CDS-3UTR CAA 90 bp GTAATCAAGGTGAGATTCTGCAGGACGATCATGGAGCCTCGTGCCAGGCAGAGGGCTGGACAGCGGAACTaGACGGTGTTCCCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: VIKVRFCRTIMEPRARQRAGQRN*TVFPAG
Trigger: ACCTGCGGGGAACACCGTCAAGTTCCGCTGTCCAGC...CCTCTGCCTGGCACGAGGCTCCATGATCGTCCTGCAGAATCTCACCTTGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CAA 90 bp ATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCACTTGTCTTTGAGCATCTaGACGGCCACAGTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: IKVEHCVRLWLSPKAQGHLSLSI*TATVLA
Trigger: AGCCAGCACTGTGGCCGTCAAGATGCTCAAAGACAA...GTGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp GGGAAAGGGGGTTCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTGTCTTTGAGCATCTaGACGGCCACAGTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: GKGGSEAQNLLLVLGGRRLSLSI*TATVLA
Trigger: AGCCAGCACTGTGGCCGTCAAGATGCTCAAAGACAA...CCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGAACCCCCTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAATGTGCCTGCACAGCCTaGAGCCTTGCTCATGTCTGC +
Preference number: 5 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQCACTA*SLAHVC
Trigger: GCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCACA...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCATGCAAAGTGGGAGACTaGGTTCTGCCTGCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPCKVGD*VLPAGV
Trigger: GACTCCAGCAGGCAGAACCAAGTCTCCCACTTTGCA...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS CCA 90 bp GCTTCCCCTGCCCCTTCTCAAGGCAGGTCATGGCCATCTCTTGCATaGGCCTCTGGAAACATCCTCTCCCTCGGCTCTTCAACCTTCATC +
Preference number: 5 (lower is better)
Translates to: ASPAPSQGRSWPSLA*ASGNILSLGSSTFI
Trigger: GATGAAGGTTGAAGAGCCGAGGGAGAGGATGTTTCCAGAGGCCCATGCAAGAGATGGCCATGACCTGCCTTGAGAAGGGGCAGGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510911.5
CDS-3UTR CAA 90 bp GCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCC +
Preference number: 5 (lower is better)
Translates to: AKVQEAEQNPDIWAIRTQRDELD*PEEPDS
Trigger: GGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCT...CTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp AAACGCCATTTGCTCCTGTTTTCGGCAGGCTTCCAGCTTCTCTGGGCTCAGGGGTGTGCCTGCACAGCCTaGAGCCTTGCTCATGTCTGC +
Preference number: 5 (lower is better)
Translates to: KRHLLLFSAGFQLLWAQGCACTA*SLAHVC
Trigger: GCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCACA...CCCCTGAGCCCAGAGAAGCTGGAAGCCTGCCGAAAACAGGAGCAAATGGCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS GCA 90 bp ACAGAGCAGTGGGTCACACCCTGCCTGTCACAGCAGTTGCAAGGATaGAACTGTATCAAGGATCTAAGAGGCAGGCCTTCCAGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: TEQWVTPCLSQQLQG*NCIKDLRGRPSSGQ
Trigger: CTGCCCGCTGGAAGGCCTGCCTCTTAGATCCTTGATACAGTTGCATCCTTGCAACTGCTGTGACAGGCAGGGTGTGACCCACTGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS-3UTR CAA 90 bp GCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAGCTCTCGGGTCCTCATCATCGTaGCTGGAGGTCAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: AQNLLLVLGGRRFSIAALGSSSS*LEVKES
Trigger: TGACTCCTTGACCTCCAGCAACGATGATGAGGACCC...GAGAGCTGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGGCACGGCAGTTGTCTTTGAGCATCTaGACGGCCACAGTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QEAEQNPDIWAIRTQARQLSLSI*TATVLA
Trigger: AGCCAGCACTGTGGCCGTCAAGATGCTCAAAGACAA...CTGCCGTGCCTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp CATGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAATCAGAGGCGTTGTCTTaGAGCATCTTGACGGCCACA +
Preference number: 5 (lower is better)
Translates to: HAIKVEHCVRLWLSPKAQSEALS*SILTAT
Trigger: TGTGGCCGTCAAGATGCTCAAAGACAACGCCTCTGA...TTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS TCA 90 bp ATGACCGTGTGTTCCCACACAGGCCTCCTCTTCTCAGTGATCAGATaGGCAGCAGCGGGGACACAAGTCCTTGGAGACCTACTGACCTTG +
Preference number: 5 (lower is better)
Translates to: MTVCSHTGLLFSVIR*AAAGTQVLGDLLTL
Trigger: CAAGGTCAGTAGGTCTCCAAGGACTTGTGTCCCCGCTGCTGCTCATCTGATCACTGAGAAGAGGAGGCCTGTGTGGGAACACACGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426612.5
CDS CCA 90 bp CCTCTTCTCAGTGATCAGATGAGCAGCAGCGGGGACACAAGTCCTTaGAGACCTACTGACCTTGCTGGGGGTAACTGTGCCTATTCGAGG +
Preference number: 5 (lower is better)
Translates to: PLLSDQMSSSGDTSP*RPTDLAGGNCAYSR
Trigger: CCTCGAATAGGCACAGTTACCCCCAGCAAGGTCAGTAGGTCTCCAAGGACTTGTGTCCCCGCTGCTGCTCATCTGATCACTGAGAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426612.5
CDS CCA 90 bp TGCCCCTTCTCAAGGCAGGTCATGGCCATCTCTTGCATGGGCCTCTaGAAACATCCTCTCCCTCGGCTCTTCAACCTTCATCTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: CPFSRQVMAISCMGL*KHPLPRLFNLHLPA
Trigger: TGCTGGAAGATGAAGGTTGAAGAGCCGAGGGAGAGGATGTTTCCAGAGGCCCATGCAAGAGATGGCCATGACCTGCCTTGAGAAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510911.5
CDS-3UTR CAA 90 bp GAGTCACCTGTAATCAAGGTGAGATTCTGCAGGACGATCATGGAGCCTCGTGCCTGTCCAGTAGGGTGCTaGCTGGGGGTAACTGTGCCT +
Preference number: 5 (lower is better)
Translates to: ESPVIKVRFCRTIMEPRACPVGC*LGVTVP
Trigger: AGGCACAGTTACCCCCAGCAAGCACCCTACTGGACA...GGCACGAGGCTCCATGATCGTCCTGCAGAATCTCACCTTGATTACAGGTGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS-3UTR CAA 90 bp TGCTATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGTCCACCTCTGAGCTATaGATGTCTGCAGTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: CYQGRALCQAVAEPQGPRSTSEL*MSAVFR
Trigger: CCTAAAGACTGCAGACATCAATAGCTCAGAGGTGGA...CCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp TATCAAGGTCGAGCACTGTGTCAGGCTGTGGCTGAGCCCCAAGGCCCAAGGCCATCCACCTCTGAGCTATaGATGTCTGCAGTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: YQGRALCQAVAEPQGPRPSTSEL*MSAVFR
Trigger: CCTAAAGACTGCAGACATCAATAGCTCAGAGGTGGA...TGGCCTTGGGCCTTGGGGCTCAGCCACAGCCTGACACAGTGCTCGACCTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
CDS-3UTR CAA 90 bp TCAGAGGCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCATCAGAGGCGTTGTCTTaGAGCATCTTGACGGCCACA +
Preference number: 5 (lower is better)
Translates to: SEAQNLLLVLGGRRFSIASEALS*SILTAT
Trigger: TGTGGCCGTCAAGATGCTCAAAGACAACGCCTCTGA...TGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp GCCCAGAACCTCCTGCTGGTATTGGGAGGCAGGAGGTTTAGCATAGCAGCTCTCTCCACCTCTGAGCTATaGATGTCTGCAGTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: AQNLLLVLGGRRFSIAALSTSEL*MSAVFR
Trigger: CCTAAAGACTGCAGACATCAATAGCTCAGAGGTGGA...GAGAGCTGCTATGCTAAACCTCCTGCCTCCCAATACCAGCAGGAGGTTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000393648.6
CDS-3UTR CAA 90 bp GCCAAGGTCCAAGAAGCCGAGCAGAACCCTGACATTTGGGCCATCAGGACACAGTTTATAAAACGCCATTaGCTCCTGTTTTCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: AKVQEAEQNPDIWAIRTQFIKRH*LLFSAG
Trigger: GCCTGCCGAAAACAGGAGCAAATGGCGTTTTATAAA...CTGTGTCCTGATGGCCCAAATGTCAGGGTTCTGCTCGGCTTCTTGGACCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS GCA 72 bp GCCGCCTCACTCCCAGCTCCAGCCGGCCGCGACCCCTaGACGCGGCAGGGTCCGCAGACAGCCCGAGCGCTC +
Preference number: 6 (lower is better)
Translates to: AASLPAPAGRDP*TRQGPQTARAL
Trigger: GAGCGCTCGGGCTGTCTGCGGACCCTGCCGCGTGCAGGGGTCGCGGCCGGCTGGAGCTGGGAGTGAGGCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292408.9
ENST00000393648.6
ENST00000502906.5
ENST00000503708.5
ENST00000507708.1
ENST00000510911.5
ENST00000514472.1
CDS GCA 72 bp CGGGAGAGCTTCTGCACAGTGGCGGGCGGGCGGGGGTaGCGGCCGTGGAGCGCCTGCCCTCGATACAGCCCG +
Preference number: 6 (lower is better)
Translates to: RESFCTVAGGRG*RPWSACPRYSP
Trigger: CGGGCTGTATCGAGGGCAGGCGCTCCACGGCCGGCACCCCCGCCCGCCCGCCACTGTGCAGAAGCTCTCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292408.9
ENST00000502906.5
ENST00000508139.1
ENST00000511076.1
CDS GCA 72 bp GCGCTGCGTGCCAGCACTCACGCATCAGCCCGTACCTaGGAGAGGTGGGGCGGAGGGTCACAGGGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: ALRASTHASART*ERWGGGSQGAS
Trigger: TGAGGCTCCCTGTGACCCTCCGCCCCACCTCTCGCAGGTACGGGCTGATGCGTGAGTGCTGGCACGCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513423.1
CDS CCA 72 bp CTAGACTCACGAGGCCGGCGAGCAAGGCGGGGCCGCTaGAGGAGAGACGCACGCCTCGTACCAGGGATGAGC +
Preference number: 6 (lower is better)
Translates to: LDSRGRRARRGR*RRDARLVPGMS
Trigger: GCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGGCCCCGCCTTGCTCGCCGGCCTCGTGAGTCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000502906.5
ENST00000511076.1
CDS CAA 90 bp CGGGGCCGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTGACTGTCGGGCCAGAGGGAAGCGGG +
Preference number: 6 (lower is better)
Translates to: RGRWRRDARLVPGMS*TCRKSLTVGPEGSG
Trigger: CCCGCTTCCCTCTGGCCCGACAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511076.1
CDS TCA 72 bp GCACAGCCAAGGCCAGGGAGCCCGACGCGTACAGGATaGTGTCCGTATACCTGGCCTCGGGCGCTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: AQPRPGSPTRTG*CPYTWPRALLR
Trigger: CCGCAGCAGCGCCCGAGGCCAGGTATACGGACATCATCCTGTACGCGTCGGGCTCCCTGGCCTTGGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000502906.5
ENST00000508139.1
CDS GCA 72 bp AGCCTGACTCCAGGGAGAACTGGCCTCGGGCGCTGCTaGGGTCCATGTGGGGTCCTCCTCTGGCAGCACCGT +
Preference number: 6 (lower is better)
Translates to: SLTPGRTGLGRC*GPCGVLLWQHR
Trigger: ACGGTGCTGCCAGAGGAGGACCCCACATGGACCGCAGCAGCGCCCGAGGCCAGTTCTCCCTGGAGTCAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS CAA 90 bp CGGGGCCGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTGACTCCAGGGAGAACTGGCCTCGGG +
Preference number: 6 (lower is better)
Translates to: RGRWRRDARLVPGMS*TCRKSLTPGRTGLG
Trigger: CCCGAGGCCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS GCA 72 bp CAGGGCTCACCAGCTCTGCAGCCCAGCTTAGGGCCCTaGGCCCTGCAAGGCCAGTCCTCTCTCGCAGACACA +
Preference number: 6 (lower is better)
Translates to: QGSPALQPSLGP*ALQGQSSLADT
Trigger: TGTGTCTGCGAGAGAGGACTGGCCTTGCAGGGCGCAGGGCCCTAAGCTGGGCTGCAGAGCTGGTGAGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430285.5
CDS CCA 72 bp AAGCTGCCGCTGGAGGGGTCAGCGGTAGTCCCCGCATaGGGTCAGAGCTTCTGGGTGCGGAAAGCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: KLPLEGSAVVPA*GQSFWVRKAGW
Trigger: CCAGCCTGCTTTCCGCACCCAGAAGCTCTGACCCCATGCGGGGACTACCGCTGACCCCTCCAGCGGCAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CCA 72 bp CACTGCTGGCCCAGAGGGGCATCTCGCAGCATCTCCTaGCCCTTCAGGTGCTCACCTGGCAGCACCGTGAGC +
Preference number: 6 (lower is better)
Translates to: HCWPRGASRSIS*PFRCSPGSTVS
Trigger: GCTCACGGTGCTGCCAGGTGAGCACCTGAAGGGCCAGGAGATGCTGCGAGATGCCCCTCTGGGCCAGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509511.5
CDS CAA 90 bp CGGGGCCGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTGACTCCAGGGAGAACTGTCGGGCCA +
Preference number: 6 (lower is better)
Translates to: RGRWRRDARLVPGMS*TCRKSLTPGRTVGP
Trigger: TGGCCCGACAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000502906.5
CDS CAA 90 bp CCGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCCAGGGAGAACTGGCCTCGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: PLEERRTPRTRDELD*PEEPDSRENWPRAL
Trigger: CAGCGCCCGAGGCCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS GCA 72 bp ACAGGCTGCCCAAGGGCTACTGTCAGCTCCTGCTCTTaGTGCTCCAGGCTGGGAGCCAGGCAGGGCTCAAGC +
Preference number: 6 (lower is better)
Translates to: TGCPRATVSSCS*CSRLGARQGSS
Trigger: GCTTGAGCCCTGCCTGGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGACAGTAGCCCTTGGGCAGCCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000426612.5
ENST00000502906.5
ENST00000503708.5
ENST00000509511.5
ENST00000510911.5
ENST00000513166.1
ENST00000514472.1
CDS GCA 72 bp CAGGATGATGTCCGTATACCTGGCCTCGGGCGCTGCTaGGGTCCATGTGGGGTCCTCCTCTGGCAGCACCGT +
Preference number: 6 (lower is better)
Translates to: QDDVRIPGLGRC*GPCGVLLWQHR
Trigger: ACGGTGCTGCCAGAGGAGGACCCCACATGGACCGCAGCAGCGCCCGAGGCCAGGTATACGGACATCATCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000502906.5
ENST00000508139.1
CDS GCA 72 bp ACAGGCTGCCCAAGGGCTACTGTCAGCTCCTGCTCTTaGTGCTCCAGGCTGGGAGCCAGGCAGGGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: TGCPRATVSSCS*CSRLGARQGSV
Trigger: CACAGAGCCCTGCCTGGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGACAGTAGCCCTTGGGCAGCCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507708.1
CDS GCA 72 bp ACAGAGACTGACCACCCAACAGGCCACAGCCCCCACTaGTGGCCCAGAGGGGCATCTCGCAGCATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: TETDHPTGHSPH*WPRGASRSISW
Trigger: CCAGGAGATGCTGCGAGATGCCCCTCTGGGCCAGCAGTGGGGGCTGTGGCCTGTTGGGTGGTCAGTCTCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509511.5
CDS CAA 90 bp GCACAGACGCACAGGCTGCCCAAGGGCTACTGTCAGCTCCTGCTCTaGCTGCTCCAGGCTGGGAGCCAGGCAGGGCTCAAGCTCCACTTC +
Preference number: 6 (lower is better)
Translates to: AQTHRLPKGYCQLLL*LLQAGSQAGLKLHF
Trigger: GAAGTGGAGCTTGAGCCCTGCCTGGCTCCCAGCCTGGAGCAGCAAGAGCAGGAGCTGACAGTAGCCCTTGGGCAGCCTGTGCGTCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000426612.5
ENST00000502906.5
ENST00000503708.5
ENST00000509511.5
ENST00000510911.5
ENST00000513166.1
ENST00000514472.1
CDS CAA 90 bp CCGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCCAGGGAGAACTGTCGGGCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: PLEERRTPRTRDELD*PEEPDSRENCRARG
Trigger: CCCTCTGGCCCGACAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000502906.5
CDS GCA 72 bp GTACAGGATGATGTCCGTATACCTGGCCTCGGGCGCTaGTGCGGTCCATGTGGGGTCCTCCTCTGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: VQDDVRIPGLGR*CGPCGVLLWQH
Trigger: GTGCTGCCAGAGGAGGACCCCACATGGACCGCAGCAGCGCCCGAGGCCAGGTATACGGACATCATCCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292408.9
ENST00000502906.5
ENST00000508139.1
CDS GCA 72 bp CCACAGTGCTGGCTTGGTCAGGCCGGGCAGGGTCCATaGCAAAGGCCTCTGCACGTACTACCTGGCCAAAGC +
Preference number: 6 (lower is better)
Translates to: PQCWLGQAGQGP*QRPLHVLPGQS
Trigger: GCTTTGGCCAGGTAGTACGTGCAGAGGCCTTTGGCATGGACCCTGCCCGGCCTGACCAAGCCAGCACTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000511076.1
CDS GCA 72 bp GCCCTCCAACTGCACGAGGGAGCATGCAGAGGCAGGTaGAGGACAAGCAGCACTGGACCAGGGCTACGTAGG +
Preference number: 6 (lower is better)
Translates to: ALQLHEGACRGR*RTSSTGPGLRR
Trigger: CCTACGTAGCCCTGGTCCAGTGCTGCTTGTCCTGCACCTGCCTCTGCATGCTCCCTCGTGCAGTTGGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CCA 72 bp GTTCTGCCTGCTGGAGTCAGGCTGTCACATGTGAGGTaGGGGATGCGCCCAGTACCTGGCAGCACCGTGAGC +
Preference number: 6 (lower is better)
Translates to: VLPAGVRLSHVR*GMRPVPGSTVS
Trigger: GCTCACGGTGCTGCCAGGTACTGGGCGCATCCCCCACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393637.5
CDS CCA 72 bp GTTCTGCCTGCTGGAGTCAGGCTGTCACATGTGAGGTaGGGGATGCGCCCAGTACCTGTCGGGCCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: VLPAGVRLSHVR*GMRPVPVGPEG
Trigger: TCCCTCTGGCCCGACAGGTACTGGGCGCATCCCCCACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508139.1
CDS CAA 90 bp CGGGGCCGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTGACTCCAGGGAGAACTGCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: RGRWRRDARLVPGMS*TCRKSLTPGRTAKW
Trigger: CCACTTTGCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS CAA 90 bp CAGAGCTTCTGGGTGCGGAAAGCAGGCTGGCGCCCTGGGGTCTGTTaGACCAGGGCCTGGCTTCCAACTGGCCTGGGAATTCAGGGAGCT +
Preference number: 6 (lower is better)
Translates to: QSFWVRKAGWRPGVC*TRAWLPTGLGIQGA
Trigger: AGCTCCCTGAATTCCCAGGCCAGTTGGAAGCCAGGCCCTGGTCAAACAGACCCCAGGGCGCCAGCCTGCTTTCCGCACCCAGAAGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS TCA 72 bp ACTTGGTTCTGCCTGCTGGAGTCAGGCTGTCACATGTaGGGTGGGGGATGCGCCCAGTACCTGTCGGGCCAG +
Preference number: 6 (lower is better)
Translates to: TWFCLLESGCHM*GGGCAQYLSGQ
Trigger: CTGGCCCGACAGGTACTGGGCGCATCCCCCACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAACCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508139.1
CDS GCA 72 bp AGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTGTCGGGCCAGAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: RDARLVPGMSLT*RKSLTVGPEGS
Trigger: GCTTCCCTCTGGCCCGACAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511076.1
CDS CCA 72 bp AAGCTCCACTTCCTCAGAGGCCTCCAGGGACAAGACTaGAGGCCCAGGCACACTCAGCAGGACCCCCAACAG +
Preference number: 6 (lower is better)
Translates to: KLHFLRGLQGQD*RPRHTQQDPQQ
Trigger: CTGTTGGGGGTCCTGCTGAGTGTGCCTGGGCCTCCAGTCTTGTCCCTGGAGGCCTCTGAGGAAGTGGAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000426612.5
ENST00000430285.5
ENST00000502906.5
ENST00000503708.5
ENST00000507708.1
ENST00000509511.5
ENST00000510911.5
ENST00000513166.1
ENST00000514472.1
CDS CCA 72 bp CCGCATCTCCTTCTCACAGCTCTCAGGGACCCAAGCTaGACTTCCCACCAACTGCCTTCCTGGCTCCTCCGC +
Preference number: 6 (lower is better)
Translates to: PHLLLTALRDPS*TSHQLPSWLLR
Trigger: GCGGAGGAGCCAGGAAGGCAGTTGGTGGGAAGTCCAGCTTGGGTCCCTGAGAGCTGTGAGAAGGAGATGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503708.5
ENST00000507708.1
CDS CAA 72 bp AGGCCCAAGGCCACCAGCCTATGTGCCTGCACAGCCTaGAGCCTTGCTCATGTCTGCACCCCAGACCCGAAG +
Preference number: 6 (lower is better)
Translates to: RPKATSLCACTA*SLAHVCTPDPK
Trigger: CTTCGGGTCTGGGGTGCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCACATAGGCTGGTGGCCTTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000513423.1
CDS CAA 72 bp GAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTGTCGGGCCAGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: ERRTPRTRDELD*PEEPDCRARGK
Trigger: CTTCCCTCTGGCCCGACAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511076.1
CDS CAA 72 bp TGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTGACTGTCGGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: WRRDARLVPGMS*TCRKSLTVGPE
Trigger: CTCTGGCCCGACAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511076.1
CDS CAA 90 bp GTCAGAGGCGTTGTCTTTGAGCATCTTGACGGCCACAGTGCTGGCTaGGTCAGGCCGGGCAGGGTCCATGCCAAAGGCCTCTGCACGTAC +
Preference number: 6 (lower is better)
Translates to: VRGVVFEHLDGHSAG*VRPGRVHAKGLCTY
Trigger: GTACGTGCAGAGGCCTTTGGCATGGACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGCCGTCAAGATGCTCAAAGACAACGCCTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000511076.1
CDS CAA 90 bp CCGCTGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCCAGGGAGAACTGCAAAGTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: PLEERRTPRTRDELD*PEEPDSRENCKVGD
Trigger: GTCTCCCACTTTGCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS TCA 72 bp AGTAGGGTGCTGGAGGGCAGGGGAAGGCCCCTAGAATaGCCGTGTGTTCCCACACAGGCCTCCTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: SRVLEGRGRPLE*PCVPTQASSSQ
Trigger: CTGAGAAGAGGAGGCCTGTGTGGGAACACACGGTCATTCTAGGGGCCTTCCCCTGCCCTCCAGCACCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426612.5
CDS GCA 72 bp AGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCAGGGAGAACTGTCGGG +
Preference number: 6 (lower is better)
Translates to: RDARLVPGMSLT*RKSLTPGRTVG
Trigger: CCCGACAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000502906.5
CDS GCA 72 bp CTATGTGCCTGCACAGCCTTGAGCCTTGCTCATGTCTaGACCCCAGACCCGAAGGGGAAGGAGCTGGATCCC +
Preference number: 6 (lower is better)
Translates to: LCACTALSLAHV*TPDPKGKELDP
Trigger: GGGATCCAGCTCCTTCCCCTTCGGGTCTGGGGTGCAGACATGAGCAAGGCTCAAGGCTGTGCAGGCACATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000513423.1
CDS GCA 72 bp AGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCAGGGAGAACTGGCCTC +
Preference number: 6 (lower is better)
Translates to: RDARLVPGMSLT*RKSLTPGRTGL
Trigger: GAGGCCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS CCA 72 bp CCGCATCTCCTTCTCACAGCTCTCAGGGACCCAAGCTaGACTTCCCACCAACTGCCTTCCTCGAGCCTGCGT +
Preference number: 6 (lower is better)
Translates to: PHLLLTALRDPS*TSHQLPSSSLR
Trigger: ACGCAGGCTCGAGGAAGGCAGTTGGTGGGAAGTCCAGCTTGGGTCCCTGAGAGCTGTGAGAAGGAGATGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292408.9
CDS CAA 72 bp GAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCCAGGGAGAACTGTCGG +
Preference number: 6 (lower is better)
Translates to: ERRTPRTRDELD*PEEPDSRENCR
Trigger: CCGACAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292408.9
ENST00000502906.5
CDS CAA 72 bp GTTGTCTTTGAGCATCTTGACGGCCACAGTGCTGGCTaGGTCAGGCCGGGCAGGGTCCATGCCAAAGGCCTC +
Preference number: 6 (lower is better)
Translates to: VVFEHLDGHSAG*VRPGRVHAKGL
Trigger: GAGGCCTTTGGCATGGACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGCCGTCAAGATGCTCAAAGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000511076.1
CDS CAA 72 bp GAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCCAGGGAGAACTGGCCT +
Preference number: 6 (lower is better)
Translates to: ERRTPRTRDELD*PEEPDSRENWP
Trigger: AGGCCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393648.6
CDS CAA 72 bp ATCACCTCCATCTCCGAGACCAGGTCGGCCAGGTCCTaGTCAGAGGCGTTGTCTGTAAGGGCAGCAGACGGG +
Preference number: 6 (lower is better)
Translates to: ITSISETRSARS*SEALSVRAADG
Trigger: CCCGTCTGCTGCCCTTACAGACAACGCCTCTGACAAGGACCTGGCCGACCTGGTCTCGGAGATGGAGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS GCA 72 bp CACTGCCACTCCACTTCCAGTCCATCTGGCTTCCCCTaGCCCTTCTCAAGGCAGGTCATGGCCATCTCTTGC +
Preference number: 6 (lower is better)
Translates to: HCHSTSSPSGFP*PFSRQVMAISC
Trigger: GCAAGAGATGGCCATGACCTGCCTTGAGAAGGGGCAGGGGAAGCCAGATGGACTGGAAGTGGAGTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510911.5
CDS CCA 72 bp TTGTCTTTGAGCATCTTGACGGCCACAGTGCTGGCTTaGTCAGGCCGGGCAGGGTCCATGCCAAAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LSLSILTATVLA*SGRAGSMPKAS
Trigger: AGAGGCCTTTGGCATGGACCCTGCCCGGCCTGACCAAGCCAGCACTGTGGCCGTCAAGATGCTCAAAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000511076.1
CDS CCA 72 bp CACACCTCAGCAGACGGTCACATGGACGGCCACGTGTaGAGAGGCACAGAGGGGCTGTCATACAGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: HTSADGHMDGHV*RGTEGLSYSSN
Trigger: GTTTGAGCTGTATGACAGCCCCTCTGTGCCTCTCCACACGTGGCCGTCCATGTGACCGTCTGCTGAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509511.5
CDS CCA 72 bp CCGCATCTCCTTCTCACAGCTCTCAGGGACCCAAGCTaGACTTCCCACCAACTGCCTTCCTCCTCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: PHLLLTALRDPS*TSHQLPSSSSL
Trigger: CAAGGAGGAGGAGGAAGGCAGTTGGTGGGAAGTCCAGCTTGGGTCCCTGAGAGCTGTGAGAAGGAGATGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510911.5
CDS CAA 72 bp TGGAGGAGAGACGCACGCCTCGTACCAGGGATGAGCTaGACTTGCCGGAAGAGCCTGACTCCAGGGAGAACT +
Preference number: 6 (lower is better)
Translates to: WRRDARLVPGMS*TCRKSLTPGRT
Trigger: AGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000508139.1
CDS CAA 90 bp TTGCCGGAAGAGCCTGACTCCAGGGAGAACTGCAAAGTGGGAGACTaGGTTCTGCCTGCTGGAGTCAGGCTGTCACATGTGAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: LPEEPDSRENCKVGD*VLPAGVRLSHVRWG
Trigger: CCCCCACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAACCAAGTCTCCCACTTTGCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS GCA 72 bp AGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTTaGCGGAAGAGCCTGACTCCAGGGAGAACTGCAAAG +
Preference number: 6 (lower is better)
Translates to: RDARLVPGMSLT*RKSLTPGRTAK
Trigger: CTTTGCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS CCA 72 bp GGAGAACTGCAAAGTGGGAGACTTGGTTCTGCCTGCTaGAGTCAGGCTGTCACATGTGAGGTGGGGGATGCG +
Preference number: 6 (lower is better)
Translates to: GELQSGRLGSAC*SQAVTCEVGDA
Trigger: CGCATCCCCCACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAACCAAGTCTCCCACTTTGCAGTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS CCA 72 bp TGCCGGAAGAGCCTGACTCCAGGGAGAACTGCAAAGTaGGAGACTTGGTTCTGCCTGCTGGAGTCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: CRKSLTPGRTAK*ETWFCLLESGC
Trigger: ACAGCCTGACTCCAGCAGGCAGAACCAAGTCTCCCACTTTGCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS CAA 72 bp ATCACCTCCATCTCCGAGACCAGGTCGGCCAGGTCCTaGTCAGAGGCGTTGTCTTTGAGCATCTTGACGGCC +
Preference number: 6 (lower is better)
Translates to: ITSISETRSARS*SEALSLSILTA
Trigger: GGCCGTCAAGATGCTCAAAGACAACGCCTCTGACAAGGACCTGGCCGACCTGGTCTCGGAGATGGAGGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000511076.1
CDS CAA 72 bp GAGAGACGCACGCCTCGTACCAGGGATGAGCTTGACTaGCCGGAAGAGCCTGACTCCAGGGAGAACTGCAAA +
Preference number: 6 (lower is better)
Translates to: ERRTPRTRDELD*PEEPDSRENCK
Trigger: TTTGCAGTTCTCCCTGGAGTCAGGCTCTTCCGGCAAGTCAAGCTCATCCCTGGTACGAGGCGTGCGTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS GCA 72 bp CAGGGAGAACTGCAAAGTGGGAGACTTGGTTCTGCCTaGTGGAGTCAGGCTGTCACATGTGAGGTGGGGGAT +
Preference number: 6 (lower is better)
Translates to: QGELQSGRLGSA*WSQAVTCEVGD
Trigger: ATCCCCCACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAACCAAGTCTCCCACTTTGCAGTTCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393637.5
ENST00000508139.1
CDS CCA 72 bp AGTGATCAGATGAGCAGCAGCGGGGACACAAGTCCTTaGAGACCTACTGACCTTGCTGGGGGTAACTGTGCC +
Preference number: 6 (lower is better)
Translates to: SDQMSSSGDTSP*RPTDLAGGNCA
Trigger: GGCACAGTTACCCCCAGCAAGGTCAGTAGGTCTCCAAGGACTTGTGTCCCCGCTGCTGCTCATCTGATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426612.5
CDS CAA 90 bp ACGATCACGTACAGGGGCCCTTCCTGGGTGCAGACACCAAGCAGGTaGATGATGTTCTTGTGTCGGCCGATCAGCTTCATCACCTCCATC +
Preference number: 6 (lower is better)
Translates to: TITYRGPSWVQTPSR*MMFLCRPISFITSI
Trigger: GATGGAGGTGATGAAGCTGATCGGCCGACACAAGAACATCATCAACCTGCTTGGTGTCTGCACCCAGGAAGGGCCCCTGTACGTGATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000483872.2
ENST00000502906.5
ENST00000511076.1
CDS TCA 72 bp TGTTCCCACACAGGCCTCCTCTTCTCAGTGATCAGATaGGCAGCAGCGGGGACACAAGTCCTTGGAGACCTA +
Preference number: 6 (lower is better)
Translates to: CSHTGLLFSVIR*AAAGTQVLGDL
Trigger: TAGGTCTCCAAGGACTTGTGTCCCCGCTGCTGCTCATCTGATCACTGAGAAGAGGAGGCCTGTGTGGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426612.5
CDS GCA 72 bp GCTCCAGCACATCTAGCAGGTAGTTATAGCGGATGCTaGCCACAGCGTTCTCTACCAGGCAGGTGTATGTGC +
Preference number: 6 (lower is better)
Translates to: APAHLAGSYSGC*PQRSLPGRCMC
Trigger: GCACATACACCTGCCTGGTAGAGAACGCTGTGGGCAGCATCCGCTATAACTACCTGCTAGATGTGCTGGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000509511.5
CDS GCA 72 bp ACCGCTCCAGCACATCTAGCAGGTAGTTATAGCGGATaGTGCCCACAGCGTTCTCTACCAGGCAGGTGTATG +
Preference number: 6 (lower is better)
Translates to: TAPAHLAGSYSG*CPQRSLPGRCM
Trigger: CATACACCTGCCTGGTAGAGAACGCTGTGGGCAGCATCCGCTATAACTACCTGCTAGATGTGCTGGAGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292408.9
ENST00000393637.5
ENST00000393648.6
ENST00000502906.5
ENST00000509511.5
CDS CCA 72 bp CTGAACCTCAGGTTCGTCTTGTGGGAAACAGAGCAGTaGGTCACACCCTGCCTGTCACAGCAGTTGCAAGGA +
Preference number: 6 (lower is better)
Translates to: LNLRFVLWETEQ*VTPCLSQQLQG
Trigger: TCCTTGCAACTGCTGTGACAGGCAGGGTGTGACCCACTGCTCTGTTTCCCACAAGACGAACCTGAGGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS GCA 72 bp TGGGTCACACCCTGCCTGTCACAGCAGTTGCAAGGATaGAACTGTATCAAGGATCTAAGAGGCAGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: WVTPCLSQQLQG*NCIKDLRGRPS
Trigger: GGAAGGCCTGCCTCTTAGATCCTTGATACAGTTGCATCCTTGCAACTGCTGTGACAGGCAGGGTGTGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CCA 72 bp TCAAGGCAGGTCATGGCCATCTCTTGCATGGGCCTCTaGAAACATCCTCTCCCTCGGCTCTTCAACCTTCAT +
Preference number: 6 (lower is better)
Translates to: SRQVMAISCMGL*KHPLPRLFNLH
Trigger: ATGAAGGTTGAAGAGCCGAGGGAGAGGATGTTTCCAGAGGCCCATGCAAGAGATGGCCATGACCTGCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510911.5
CDS CAA 72 bp AAAAGTCTCCTAGCGTCTCTGAACCTCAGGTTCGTCTaGTGGGAAACAGAGCAGTGGGTCACACCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: KSLLASLNLRFV*WETEQWVTPCL
Trigger: CAGGCAGGGTGTGACCCACTGCTCTGTTTCCCACAAGACGAACCTGAGGTTCAGAGACGCTAGGAGACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CAA 90 bp TTGTGGGAAACAGAGCAGTGGGTCACACCCTGCCTGTCACAGCAGTaGCAAGGATGCAACTGTATCAAGGATCTAAGAGGCAGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LWETEQWVTPCLSQQ*QGCNCIKDLRGRPS
Trigger: GGAAGGCCTGCCTCTTAGATCCTTGATACAGTTGCATCCTTGCAACTGCTGTGACAGGCAGGGTGTGACCCACTGCTCTGTTTCCCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CAA 90 bp GGGCTACGTAGGTCTAGGGCTGAATCCTTGCTAGGCTGTGTGGCCTaGAAAAAGTCTCCTAGCGTCTCTGAACCTCAGGTTCGTCTTGTG +
Preference number: 6 (lower is better)
Translates to: GLRRSRAESLLGCVA*KKSPSVSEPQVRLV
Trigger: CACAAGACGAACCTGAGGTTCAGAGACGCTAGGAGACTTTTTCAAGGCCACACAGCCTAGCAAGGATTCAGCCCTAGACCTACGTAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483872.2
CDS CAA 72 bp AGGTCTAGGGCTGAATCCTTGCTAGGCTGTGTGGCCTaGAAAAAGTCTCCTAGCGTCTCTGAACCTCAGGTT +
Preference number: 6 (lower is better)
Translates to: RSRAESLLGCVA*KKSPSVSEPQV
Trigger: AACCTGAGGTTCAGAGACGCTAGGAGACTTTTTCAAGGCCACACAGCCTAGCAAGGATTCAGCCCTAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483872.2