RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGFR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000068078

Ensembl transcript IDs: ENST00000260795.8, ENST00000340107.8, ENST00000352904.6, ENST00000412135.7, ENST00000440486.8, ENST00000469068.1, ENST00000474521.1, ENST00000481110.7, ENST00000643463.1

Found 683 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGCTCCCTaGCCCACGGGGGTCCCACCGGGTGGGCCCACTTACATTCTGCAC +
Preference number: 1 (lower is better)
Translates to: RGAKAEAGAMSGPAP*PTGVPPGGPTYILH
Trigger: GTGCAGAATGTAAGTGGGCCCACCCGGTGGGACCCCCGTGGGGCAGGGAGCTGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTaGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGCTCCCTG +
Preference number: 1 (lower is better)
Translates to: SFGCGRGRGPPCDVP*CKGRGRSHVGPSSL
Trigger: CAGGGAGCTGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CCA 90 bp ATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTaGGGCCCTCCCCTGAGGACAGCCTTGCGATGCGCACCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: IWGRQAARARRHWPA*GPPLRTALRCAPVV
Trigger: CACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR TCA 90 bp AGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTaGGGACAGCCTTGCGATGCGCACCAGTGGTGTGTTGGAGCTCAT +
Preference number: 1 (lower is better)
Translates to: RQLELGDIGQRGALP*GQPCDAHQWCVGAH
Trigger: ATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR GCA 90 bp CAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTaGACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCA +
Preference number: 1 (lower is better)
Translates to: QNKGPSVLQHQSGDR*TAAGTPRVPLHLEA
Trigger: TGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR GCA 90 bp AGACATTGGCCAGCGTGGGGCCCTCCCCTGAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCA +
Preference number: 1 (lower is better)
Translates to: RHWPAWGPPLRTALR*APVVCWSSWTRWTP
Trigger: TGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR GCA 90 bp ACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGATaGGCACGCACACAGGCACACGCGGATGTGCACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: TAAGTPRVPLHLEAR*ARTQAHADVHTHTH
Trigger: GTGTGTGTGTGTGTGCACATCCGCGTGTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR GCA 90 bp CACACACACACACAGACCAAAGCTCTGTGTAGCTGTCTCTCCATCTaGACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: HTHTQTKALCSCLSI*TESHAGEWLCTSSR
Trigger: CCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGCTTTGGTCTGTGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR TCA 90 bp GAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGCGTGGGGCCCTCCCCTaGGGACAGCCTTGCGATGCG +
Preference number: 2 (lower is better)
Translates to: ELLLGRLAGVEGVVQARGRGALP*GQPCDA
Trigger: CGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACG...CCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACCCCCGCCCAGGGCCATaGCTGCCTCCTGTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHPRPGP*LPPVPP
Trigger: TGGGGGCACAGGAGGCAGGCATGGCCCTGGGCGGGG...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCCTCCCCAAGGGGCTTaGCCAGGGTCAGCCGGGCCC +
Preference number: 2 (lower is better)
Translates to: EGELLLGRLAGVEGVVQAPPQGA*PGSAGP
Trigger: GGGCCCGGCTGACCCTGGGCAAGCCCCTTGGGGAGG...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR CCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCCTGCAGGCTCAGCTTTaGGTGTGGGAGGGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: RPWSSACMGETPWGLPPRLQAQL*VWEGPR
Trigger: CCTCGGCCCCTCCCACACCCAAAGCTGAGCCTGCAG...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTGCCGGGGAGTGGCTGTaGACCAGCAGCAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPAGEWL*TSSRVG
Trigger: GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGC...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGCCGGGGAGTGGCTGTaGACCAGCAGCAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKAGEWL*TSSRVG
Trigger: GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGC...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR TCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCTCTGCTTGCATGGGTaGGACCCCCTGGGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAILCLHG*DPLGPP
Trigger: GGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCCACCTGGAGGCAAGATaGGCACGCACACAGGCACAC +
Preference number: 2 (lower is better)
Translates to: RPWSSACMGETPWGLPPRHLEAR*ARTQAH
Trigger: GTGTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTG...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp TGGGGGTGTCCTGGCCACCCGGGGAGTACTGCTCGAAAGGCGCCGACAGGTCCACCCGCAGGTTACCCTTaGCCGCGTACTCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: WGCPGHPGSTARKAPTGPPAGYP*PRTPPA
Trigger: TGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGG...TGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR CCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCGGGTACCTCTGCACCTaGAGGCAAGATGCGCACGCA +
Preference number: 2 (lower is better)
Translates to: RPWSSACMGETPWGLPPRGYLCT*RQDAHA
Trigger: TGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCC...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CAA 90 bp GCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGGACAGCCTaGCGATGCGCACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGG +
Preference number: 2 (lower is better)
Translates to: ARRHWPAWGPPLRTA*RCAPVVCWSSWTRW
Trigger: CCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR CAA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTaGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: PEQRPLGAAAPVRRP*HSSGDTQGTSAPGG
Trigger: GCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGGTAGCTGAGGATGCCTaGATACACACTGCCCGCCTC +
Preference number: 2 (lower is better)
Translates to: SAGSSSSETLASVGPSPEVAEDA*IHTARL
Trigger: GAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTAC...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACACCTGGAGGCAAGATaGGCACGCACACAGGCACAC +
Preference number: 2 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRHLEAR*ARTQAH
Trigger: GTGTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACACCCAGGGTACCTCTaGACCTGGAGGCAAGATGCG +
Preference number: 2 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRHPGYL*TWRQDA
Trigger: CGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACAAGGCCCCTCGGTGCTaGAGCACCAGTCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHKAPRC*STSQET
Trigger: GGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTT...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCAAGGTGCTGGACATGTaGGGCTTCCCTGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: RPWSSACMGETPWGLPPRKVLDM*GFPAGS
Trigger: TGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTT...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTGGTCCTCTGCTTGCATaGGTGAGACCCCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIGPLLA*VRPPGA
Trigger: GGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACC...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CAA 90 bp GGGCCCTCCCCTGAGGACAGCCTTGCGATGCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCTTG +
Preference number: 2 (lower is better)
Translates to: GPSPEDSLAMRTSGV*ELMDALDSRDTCRL
Trigger: CAAGCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR TCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCCGCCACCACCAGGATaGACAGGAAGAAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: EGELLLGRLAGVEGVVQAPPPPG*TGRSPP
Trigger: GGGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGCGG...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR TCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGGGACACCTGTCGCTTaGGCGGGAAGCGGGAGATCT +
Preference number: 2 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQGTPVA*AGSGRS
Trigger: AGATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCC...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGAAGCGGGAGATCTTGTaGACGGTGGGGGAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQKREIL*TVGEPR
Trigger: CCTGGGCTCCCCCACCGTGCACAAGATCTCCCGCTT...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCAGTCAGGAGACCGTTaGACAGCAGCGGGGACACCC +
Preference number: 2 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIQSGDR*TAAGTP
Trigger: GGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACATGCCTGCCTCCTGTaGCCCCAGGGTCGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKHACLL*PQGRRP
Trigger: AGGCCTGCGACCCTGGGGGCACAGGAGGCAGGCATG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR TCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGTCTCTCCATCTGCACTaGGTCTCATGCCGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRSLHLH*VSCRGV
Trigger: CACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGA...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTGCCGGGGAGTGGCTGTaGACCAGCAGCAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRAGEWL*TSSRVG
Trigger: GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGC...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCACCTGGAGGCAAGATaGGCACGCACACAGGCACAC +
Preference number: 2 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIHLEAR*ARTQAH
Trigger: GTGTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCACCCAGGGTACCTCTaGACCTGGAGGCAAGATGCG +
Preference number: 2 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIHPGYL*TWRQDA
Trigger: CGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAAAAGGCCCCTCGGTGCTaGAGCACCAGTCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEKAPRC*STSQET
Trigger: GGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTT...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp CGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGTCAGACATTGGCCAGCGTaGGGCCCTCCCCTGAGGACA +
Preference number: 2 (lower is better)
Translates to: RQVQVLVGGRHGKDTVQVRHWPA*GPPLRT
Trigger: TGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCT...GACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR CCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTGCACCAGCAGCAGGGTaGGCTGCTAGGGACCCCTCA +
Preference number: 2 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCAPAAG*AARDPS
Trigger: TGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
3UTR-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTGGGTACCTCTGCACCTaGAGGCAAGATGCGCACGCA +
Preference number: 2 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIGYLCT*RQDAHA
Trigger: TGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCC...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGCTCCGGGGCAGGCTaGACGTACATTCTTGGCCGT +
Preference number: 2 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAISSGAG*TYILGR
Trigger: ACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAGCT...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR TCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGCCAGCACTCCCGCATaGTCATGTACAGGTCGTGTG +
Preference number: 2 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQASTPA*SCTGRV
Trigger: CACACGACCTGTACATGATCATGCGGGAGTGCTGGC...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR TCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTTCTCTCCATCTGCACTaGGTCTCATGCCGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAISLHLH*VSCRGV
Trigger: CACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGA...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR TCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAATCTCTCCATCTGCACTaGGTCTCATGCCGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQSLHLH*VSCRGV
Trigger: CACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGA...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR TCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTCTCTGCTTGCATGGGTaGGACCCCCTGGGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRLCLHG*DPLGPP
Trigger: GGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAG...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGG +
Preference number: 2 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQRTALR*APVVCW
Trigger: CCAACACACCACTGGTGCGCATCGCAAGGCTGTCCT...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACAGCTGTCTCTCCATCTaGACTGAGTCTCATGCCGGG +
Preference number: 2 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHSCLSI*TESHAG
Trigger: CCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCT...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTACAAAGGCCCCTCGGTaGTGCAGCACCAGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGTKAPR*CSTSQE
Trigger: CTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGT...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTCATGCCTGCCTCCTGTaGCCCCAGGGTCGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRHACLL*PQGRRP
Trigger: AGGCCTGCGACCCTGGGGGCACAGGAGGCAGGCATG...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGCACCAGTGGTGTGTTaGAGCTCATGGACGCGTTGG +
Preference number: 2 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQAPVVC*SSWTRW
Trigger: CCAACGCGTCCATGAGCTCCAACACACCACTGGTGC...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR CCA 90 bp GCTCCCATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGTGCGATGCGCACCAGTaGTGTGTTGGAGCTCATGGA +
Preference number: 2 (lower is better)
Translates to: APIWGRQAARARRHWPAWCDAHQ*CVGAHG
Trigger: TCCATGAGCTCCAACACACCACTGGTGCGCATCGCA...CCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR TCA 90 bp AGCCTTGCGATGCGCACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGCCCACCCCGTAGCTaGGGATGCCTGCATACACAC +
Preference number: 2 (lower is better)
Translates to: SLAMRTSGVLELMDALDSSPPRS*GCLHTH
Trigger: GTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCT...GGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp GAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGTCAAAGGTGACGTTGTaGAAGGAGAGAACCTCTAGC +
Preference number: 2 (lower is better)
Translates to: ELLLGRLAGVEGVVQARGSKVTL*KERTSS
Trigger: GCTAGAGGTTCTCTCCTTGCACAACGTCACCTTTGA...CCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCTGCCTGCATACACACTaGCCGCCTCGTCAGCCTCCA +
Preference number: 2 (lower is better)
Translates to: TSGVLELMDALDSRDTCRCLHTH*PPRQPP
Trigger: TGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCA...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAACATGTGGGGCTTCCCTaGAGGCTCAGCTTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEHVGLP*RLSFGC
Trigger: ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATG...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp CGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGTCGTGTGTTGGAGCTCATaGACGCGTTGGACTCCAGGG +
Preference number: 2 (lower is better)
Translates to: RQVQVLVGGRHGKDTVQVVCWSS*TRWTPG
Trigger: CCCTGGAGTCCAACGCGTCCATGAGCTCCAACACAC...GACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR TCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAACGTAATTTCAGTCTCTaGGGGGCAGGGTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLERNFSL*GAGWEV
Trigger: CACTTCCCACCCTGCCCCTCAGAGACTGAAATTACG...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR TCA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCCGGCGTCCTCAAAGGTaGCGTTGTGCAAGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: TSGVLELMDALDSRDTCRRRPQR*RCARRE
Trigger: TTCTCTCCTTGCACAACGTCACCTTTGAGGACGCCG...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR CCA 90 bp CGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGTCCTGTGGATGCACTTCTaGGAGGCCAAGTACTCCATG +
Preference number: 2 (lower is better)
Translates to: RQVQVLVGGRHGKDTVQVLWMHF*EAKYSM
Trigger: CATGGAGTACTTGGCCTCCCAGAAGTGCATCCACAG...GACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR GCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAGTGTGGGAACAAGAGTaGCAGGGGCCCATAAATAGC +
Preference number: 2 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKVWEQE*QGPINS
Trigger: GCTATTTATGGGCCCCTGGCACTCTTGTTCCCACAC...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTCTGGACGTACATTCTTaGCCGTCCCTCTATCGGCGG +
Preference number: 2 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRLDVHS*PSLYRR
Trigger: CCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAG...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCTGCAGGCTCAGCTTTaGGTGTGGGAGGGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASLQAQL*VWEGPR
Trigger: CCTCGGCCCCTCCCACACCCAAAGCTGAGCCTGCAG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR TCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTCCGAGGCCCACCCTGTaGTGTCCCGTGGTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCPRPTL*CPVVQR
Trigger: CCTTTGCACCACGGGACATCACAGGGTGGGCCTCGG...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCACAAAGGCCCCTCGGTaGTGCAGCACCAGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: PCLGHTAIRRICMKIPACTKAPR*CSTSQE
Trigger: CTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGT...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCTGTGATGTCCCGTGGTaGAAAGGCAGAGGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: PCLGHTAIRRICMKIPACCDVPW*KGRGRS
Trigger: GCTCCGGCCTCTGCCTTTGCACCACGGGACATCACA...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCCCTGGTCCTCTGCTTaGATGGGTGAGACCCCCTGG +
Preference number: 2 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASPWSSA*MGETPW
Trigger: CCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGCACCAGCAGCAGGGTaGGCTGCTAGGGACCCCTCA +
Preference number: 2 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCAPAAG*AARDPS
Trigger: TGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
3UTR-3UTR CCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCCCTGTGATGTCCCGTaGTGCAAAGGCAGAGGCCGG +
Preference number: 2 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASPCDVP*CKGRGR
Trigger: CCGGCCTCTGCCTTTGCACCACGGGACATCACAGGG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCGGGAAAGCCTGGAGGTaGGGAGGCGGTGCCACTAAC +
Preference number: 2 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASGKAWR*GGGATN
Trigger: GTTAGTGGCACCGCCTCCCCACCTCCAGGCTTTCCC...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTCAGTCAGGAGACCGTTaGACAGCAGCGGGGACACCC +
Preference number: 2 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCQSGDR*TAAGTP
Trigger: GGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTG...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCACAAAGGCCCCTCGGTaGTGCAGCACCAGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASTKAPR*CSTSQE
Trigger: CTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGT...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCAGCTGTCTCTCCATCTaGACTGAGTCTCATGCCGGG +
Preference number: 2 (lower is better)
Translates to: PCLGHTAIRRICMKIPACSCLSI*TESHAG
Trigger: CCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCT...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR GCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTACAAAGGCCCCTCGGTaGTGCAGCACCAGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCTKAPR*CSTSQE
Trigger: CTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGT...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTCCAGGCACAAGGTGCTaGACATGTGGGGCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCPGTRC*TCGASL
Trigger: CAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGG...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCAAACTCTCCGCCATGTaGCCAGCTAAATGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PCLGHTAIRRICMKIPACKLSAM*PAKCWK
Trigger: CTTCCAGCATTTAGCTGGCCACATGGCGGAGAGTTT...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CAA 90 bp ACAGTACAGAACGAACCAACTGAATTCACGGCTTCCCTCCAAGCTTaGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGT +
Preference number: 2 (lower is better)
Translates to: TVQNEPTEFTASLQA*KGSSPGYKTLEALR
Trigger: ACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAAAGCTTGGAGGGAAGCCGTGAATTCAGTTGGTTCGTTCTGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR GCA 72 bp AAGGCAGAGGCCGGAGCCATGTCGGGCCCAGCTCCCTaGCCCACGGGGGTCCCACCGGGTGGGCCCACTTAC +
Preference number: 3 (lower is better)
Translates to: KAEAGAMSGPAP*PTGVPPGGPTY
Trigger: GTAAGTGGGCCCACCCGGTGGGACCCCCGTGGGGCAGGGAGCTGGGCCCGACATGGCTCCGGCCTCTGCCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp CTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGCCGCCGTTGGCGGCCCGGTCCTaGTCAATGCCGATGGCCTCC +
Preference number: 3 (lower is better)
Translates to: LLGRLAGVEGVVQARGPPLAARS*SMPMAS
Trigger: GGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAA...CGGCGGCCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR CCA 72 bp TGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTaGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCC +
Preference number: 3 (lower is better)
Translates to: CGRGRGPPCDVP*CKGRGRSHVGP
Trigger: GGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp GAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGTCGAGCTCGGAGACATaGGCCAGCGTGGGGCCCTCC +
Preference number: 3 (lower is better)
Translates to: ELLLGRLAGVEGVVQARGSSSET*ASVGPS
Trigger: GGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGA...CCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR CAA 90 bp CTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGCCGCCGCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTG +
Preference number: 3 (lower is better)
Translates to: LLGRLAGVEGVVQARGPPRTSGV*ELMDAL
Trigger: CAACGCGTCCATGAGCTCCAACACACCACTGGTGCG...CGGCGGCCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR CCA 72 bp CGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTaGGGCCCTCCCCTGAGGACAGCCTTGCGATGCGCA +
Preference number: 3 (lower is better)
Translates to: RQAARARRHWPA*GPPLRTALRCA
Trigger: TGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR CAA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGAGGGACACCTGTCGCTaGAGCGGGAAGCGGGAGATC +
Preference number: 3 (lower is better)
Translates to: SAGSSSSETLASVGPSPERDTCR*SGKREI
Trigger: GATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCCT...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR TCA 72 bp CAGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTaGTGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCA +
Preference number: 3 (lower is better)
Translates to: QLWVWEGPRPTL*CPVVQRQRPEP
Trigger: TGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR GCA 72 bp GGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTaGACAGCAGCGGGGACACCCAGGGTACCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: GPSVLQHQSGDR*TAAGTPRVPLH
Trigger: GTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CCA 72 bp TGCCCAGGGTCAGCCGGGCCCGAGACAGCTCCCATTTaGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGG +
Preference number: 3 (lower is better)
Translates to: CPGSAGPETAPI*GRQAARARRHW
Trigger: CCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCGGGCCCGGCTGACCCTGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR CCA 72 bp GCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTaGAGGCAAGATGCGCACGCACACAGGCACACGCGG +
Preference number: 3 (lower is better)
Translates to: AQQRGHPGYLCT*RQDAHAHRHTR
Trigger: CCGCGTGTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGGAGCTCATGGACGCGTaGGACTCCAGGGACACCTGT +
Preference number: 3 (lower is better)
Translates to: SAGSSSSETLASVGPSPEELMDA*DSRDTC
Trigger: ACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTC...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR GCA 72 bp CCAGCGTGGGGCCCTCCCCTGAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGGAGCTCATGGACGCGT +
Preference number: 3 (lower is better)
Translates to: PAWGPPLRTALR*APVVCWSSWTR
Trigger: ACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR TCA 72 bp GAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTaGGGACAGCCTTGCGATGCGCACCAGTGGTGTGTT +
Preference number: 3 (lower is better)
Translates to: ELGDIGQRGALP*GQPCDAHQWCV
Trigger: AACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR GCA 72 bp ACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTaGACCTGGAGGCAAGATGCGCACGCACACAGGCAC +
Preference number: 3 (lower is better)
Translates to: TVAQQRGHPGYL*TWRQDAHAHRH
Trigger: GTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCGGGAAGCGGGAGATCTaGTGCACGGTGGGGGAGCCC +
Preference number: 3 (lower is better)
Translates to: TSGVLELMDALDSRDTCRGKREI*CTVGEP
Trigger: GGGCTCCCCCACCGTGCACAAGATCTCCCGCTTCCC...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR-3UTR CAA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTGGTCGCAGGCCTCCGTaGTACCAGCCTTTTCCTCTT +
Preference number: 3 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIGRRPP*YQPFPL
Trigger: AAGAGGAAAAGGCTGGTACAACGGAGGCCTGCGACC...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAAGCTGGACGTACATTCTaGGCCGTCCCTCTATCGGCG +
Preference number: 3 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEAGRTF*AVPLSA
Trigger: CGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGC...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR GCA 72 bp GAACAGGAAGAAGCCCACCCCGTAGCTGAGGATGCCTaGATACACACTGCCCGCCTCGTCAGCCTCCACCAG +
Preference number: 3 (lower is better)
Translates to: EQEEAHPVAEDA*IHTARLVSLHQ
Trigger: CTGGTGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR CCA 72 bp CTGAGGACAGCCTTGCGATGCGCACCAGTGGTGTGTTaGAGCTCATGGACGCGTTGGACTCCAGGGACACCT +
Preference number: 3 (lower is better)
Translates to: LRTALRCAPVVC*SSWTRWTPGTP
Trigger: AGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR CCA 72 bp ATCCTCCAGCTCCGGGGCAGGCTGGACGTACATTCTTaGCCGTCCCTCTATCGGCGGGATAAACCTTCTCGG +
Preference number: 3 (lower is better)
Translates to: ILQLRGRLDVHS*PSLYRRDKPSR
Trigger: CCGAGAAGGTTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAGCTGGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAACAACCTTTTAGGCTaGGAGGGGATCCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAINNLLG*EGILQL
Trigger: GAGCTGGAGGATCCCCTCCAAGCCTAAAAGGTTGTT...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCTCCTCAAAGGTGACGTaGTGCAAGGAGAGAACCTCT +
Preference number: 3 (lower is better)
Translates to: TSGVLELMDALDSRDTCRSSKVT*CKERTS
Trigger: AGAGGTTCTCTCCTTGCACAACGTCACCTTTGAGGA...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR GCA 72 bp ACACAGACCAAAGCTCTGTGTAGCTGTCTCTCCATCTaGACTGAGTCTCATGCCGGGGAGTGGCTGTGCACC +
Preference number: 3 (lower is better)
Translates to: TQTKALCSCLSI*TESHAGEWLCT
Trigger: GGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGCTTTGGTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCGCTGGACGTACATTCTaGGCCGTCCCTCTATCGGCG +
Preference number: 3 (lower is better)
Translates to: PCLGHTAIRRICMKIPACAGRTF*AVPLSA
Trigger: CGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGC...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR GCA 72 bp ATATATAAACTTGTAACATCTAATAACATCGGAACCTaGACACAGGGCCGGCCCCTCCCTGGAAACCGTCTC +
Preference number: 3 (lower is better)
Translates to: IYKLVTSNNIGT*TQGRPLPGNRL
Trigger: GAGACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGTTACAAGTTTATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR-3UTR CAA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCAACAACCTTTTAGGCTaGGAGGGGATCCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: PCLGHTAIRRICMKIPACNNLLG*EGILQL
Trigger: GAGCTGGAGGATCCCCTCCAAGCCTAAAAGGTTGTT...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCTACAGGGGCCCGCCCTaGGTGCAGGCGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRYRGPP*VQAPSR
Trigger: CCTGCTGGGCGCCTGCACGCAGGGCGGGCCCCTGTA...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGCCGCCGTCTGCTCGGGGCCCGTaGACGCTCAGCCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLGRLAGVEGVVQARGPPSARGP*TLSQKA
Trigger: GGCCTTTTGGCTGAGCGTTCACGGGCCCCGAGCAGA...CGGCGGCCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGCGCCCCACGACGCGCTaGTCCGTCCCCAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPERPTTR*SVPKDS
Trigger: GGAGTCCTTGGGGACGGAGCAGCGCGTCGTGGGGCG...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCCAGGGCCATGCCTaGCTCCTGTGCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGAQGHA*LLCPQG
Trigger: ACCCTGGGGGCACAGGAGGCAGGCATGGCCCTGGGC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACTGCTGGCCGGGCTCTaGGCCCGGGACTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRLLAGL*ARDFCR
Trigger: GCGGCAGAAGTCCCGGGCCCAGAGCCCGGCCAGCAG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGGGGTTGCCAGCGGCTaGGCAGCGGAAGCGGACGGT +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGGVASG*AAEADG
Trigger: ACCGTCCGCTTCCGCTGCCCAGCCGCTGGCAACCCC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCACAGTACGCGCTGCGTaGGCCGCTGCCGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRTVRAA*AAAGSC
Trigger: ACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGT...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAACAGTACGCGCTGCGTaGGCCGCTGCCGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGTVRAA*AAAGSC
Trigger: ACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGT...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp TGGGGGTGTCCTGGCCACCCGGGGAGTACTGCTCGAAAGGCGCCGACAGGTCCACGTGGGGCCCTCCCCTaGGGACAGCCTTGCGATGCG +
Preference number: 4 (lower is better)
Translates to: WGCPGHPGSTARKAPTGPRGALP*GQPCDA
Trigger: CGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACG...TGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCCTCTGCTTGCATGGGTaGGACCCCCTGGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRLCLHG*DPLGPP
Trigger: GGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAG...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACTACAGGGGCCCGCCCTaGGTGCAGGCGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHYRGPP*VQAPSR
Trigger: CCTGCTGGGCGCCTGCACGCAGGGCGGGCCCCTGTA...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGCCCAGGGCCATGCCTaGCTCCTGTGCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRAQGHA*LLCPQG
Trigger: ACCCTGGGGGCACAGGAGGCAGGCATGGCCCTGGGC...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCCCATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGAGGCGCCGGCCACGATaGCCACGGCCACGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: APIWGRQAARARRHWPAWRRRPR*PRPRRA
Trigger: CGCTCTGCGTGGCCGTGGCCATCGTGGCCGGCGCCT...CCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGAAGCGGACGGTGTTaGCGGCCGGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRGSGRC*RPARPA
Trigger: TGCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCC...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGCACCGCCGTCTGGTTaGCCGGCAGCCCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPAPPSG*PAAPPA
Trigger: TGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGC...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGCCCGCTCCGACACATTaGCCAGGCGGAGGCGCACGT +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPEPAPTH*PGGGAR
Trigger: ACGTGCGCCTCCGCCTGGCCAATGTGTCGGAGCGGG...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCCGAGCTCGGAGACATTaGCCAGCGTGGGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRRARRH*PAWGPP
Trigger: GGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCG...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCGTGGGGCCCTCCCCTaGGGACAGCCTTGCGATGCG +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPRGALP*GQPCDA
Trigger: CGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGATCTTCACGGCTACGGTaGCAGGCTTGGCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGSSRLR*QAWRPG
Trigger: ACCGGGCCGCCAAGCCTGTCACCGTAGCCGTGAAGA...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACACGGAGTCGTCCCCTaGGGAGCTGGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRHGVVP*GAGAGG
Trigger: ACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGCCCCACGACGCGCTaGTCCGTCCCCAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVARPTTR*SVPKDS
Trigger: GGAGTCCTTGGGGACGGAGCAGCGCGTCGTGGGGCG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGGAACTCCACGTCGCTaGCCAGCACCGCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGGTPRR*PAPPSG
Trigger: ACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAACCTCCCCAAGGGGCTTaGCCAGGGTCAGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKPPQGA*PGSAGP
Trigger: GGGCCCGGCTGACCCTGGGCAAGCCCCTTGGGGAGG...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCTCCCCAAGGGGCTTaGCCAGGGTCAGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWPPQGA*PGSAGP
Trigger: GGGCCCGGCTGACCCTGGGCAAGCCCCTTGGGGAGG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAATACAGGGGCCCGCCCTaGGTGCAGGCGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQYRGPP*VQAPSR
Trigger: CCTGCTGGGCGCCTGCACGCAGGGCGGGCCCCTGTA...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTACAGGGGCCCGCCCTaGGTGCAGGCGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVYRGPP*VQAPSR
Trigger: CCTGCTGGGCGCCTGCACGCAGGGCGGGCCCCTGTA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGATACAGGGGCCCGCCCTaGGTGCAGGCGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARYRGPP*VQAPSR
Trigger: CCTGCTGGGCGCCTGCACGCAGGGCGGGCCCCTGTA...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGCCGGGGAGTGGCTGTaGACCAGCAGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPAGEWL*TSSRVG
Trigger: GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGC...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGCCGGGGAGTGGCTGTaGACCAGCAGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPAGEWL*TSSRVG
Trigger: GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGC...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGCCCAGGGCCATGCCTaGCTCCTGTGCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAAQGHA*LLCPQG
Trigger: ACCCTGGGGGCACAGGAGGCAGGCATGGCCCTGGGC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAACCCCGCCCAGGGCCATaGCTGCCTCCTGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKPRPGP*LPPVPP
Trigger: TGGGGGCACAGGAGGCAGGCATGGCCCTGGGCGGGG...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTAGGCGCCGGCCACGATaGCCACGGCCACGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPRRRPR*PRPRRA
Trigger: CGCTCTGCGTGGCCGTGGCCATCGTGGCCGGCGCCT...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGAGGCGCCGGCCACGATaGCCACGGCCACGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWRRRPR*PRPRRA
Trigger: CGCTCTGCGTGGCCGTGGCCATCGTGGCCGGCGCCT...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAAGGCGCCGGCCACGATaGCCACGGCCACGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKRRRPR*PRPRRA
Trigger: CGCTCTGCGTGGCCGTGGCCATCGTGGCCGGCGCCT...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCTGCTGGCCGGGCTCTaGGCCCGGGACTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWLLAGL*ARDFCR
Trigger: GCGGCAGAAGTCCCGGGCCCAGAGCCCGGCCAGCAG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCTGCTGGCCGGGCTCTaGGCCCGGGACTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAILLAGL*ARDFCR
Trigger: GCGGCAGAAGTCCCGGGCCCAGAGCCCGGCCAGCAG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGGAAGCGGACGGTGTTaGCGGCCGGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPGSGRC*RPARPA
Trigger: TGCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCC...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGCACCGCCGTCTGGTTaGCCGGCAGCCCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKAPPSG*PAAPPA
Trigger: TGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGC...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGTCCGCCATGACCACCTaGCCGAAGCAGCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPESAMTT*PKQPSP
Trigger: TGGGGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGA...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGACTGCAGGCTCAGCTTTaGGTGTGGGAGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGLQAQL*VWEGPR
Trigger: CCTCGGCCCCTCCCACACCCAAAGCTGAGCCTGCAG...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGATGGCCTCCGCCATaGCCACCTGGCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVARWPPP*PPGRSS
Trigger: GCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCACACGGAGTCGTCCCCTaGGGAGCTGGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPHGVVP*GAGAGG
Trigger: ACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTG...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACCGAGGCCCACCCTGTaGTGTCCCGTGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRPRPTL*CPVVQR
Trigger: CCTTTGCACCACGGGACATCACAGGGTGGGCCTCGG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGACGCCCCACGACGCGCTaGTCCGTCCCCAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARRPTTR*SVPKDS
Trigger: GGAGTCCTTGGGGACGGAGCAGCGCGTCGTGGGGCG...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCCGCCCCACGACGCGCTaGTCCGTCCCCAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGRPTTR*SVPKDS
Trigger: GGAGTCCTTGGGGACGGAGCAGCGCGTCGTGGGGCG...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCTGGAGGGAGTGGGGTTaGCAGCGGCTGGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAWREWG*QRLGSG
Trigger: TCCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCA...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAATGCCTCCAATGCGGTaGTCGCCGCGGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGMPPMR*SPRNSL
Trigger: CAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCAT...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGTCTACAGGGGCCCGCCCTaGGTGCAGGCGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RQVQVLVGGRHGKDTVQVYRGPP*VQAPSR
Trigger: CCTGCTGGGCGCCTGCACGCAGGGCGGGCCCCTGTA...GACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACCACCCGGGGAGTACTaGTCGAAAGGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRPPGEY*SKGADR
Trigger: CCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGGGGAGTGGCTGTaGACCAGCAGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVAGEWL*TSSRVG
Trigger: GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGC...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCAAGGCCCCTCGGTGCTaGAGCACCAGTCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRKAPRC*STSQET
Trigger: GGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTT...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCCCCCGCCCAGGGCCATaGCTGCCTCCTGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSPRPGP*LPPVPP
Trigger: TGGGGGCACAGGAGGCAGGCATGGCCCTGGGCGGGG...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCCTGCTGGCCGGGCTCTaGGCCCGGGACTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSLLAGL*ARDFCR
Trigger: GCGGCAGAAGTCCCGGGCCCAGAGCCCGGCCAGCAG...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGGAAGCGGACGGTGTTaGCGGCCGGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQGSGRC*RPARPA
Trigger: TGCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCC...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGGGGTTGCCAGCGGCTaGGCAGCGGAAGCGGACGGT +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVGVASG*AAEADG
Trigger: ACCGTCCGCTTCCGCTGCCCAGCCGCTGGCAACCCC...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CAGCTCCTCCTCGGCTGGCAGCACCACCAGCCACGCAGAGTGATGAGAAAACCCGCACCGCCGTCTGGTTaGCCGGCAGCCCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLLLGWQHHQPRRVMRKPAPPSG*PAAPPA
Trigger: TGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGC...GGGTTTTCTCATCACTCTGCGTGGCTGGTGGTGCTGCCAGCCGAGGAGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCGAGCTCGGAGACATTaGCCAGCGTGGGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPRARRH*PAWGPP
Trigger: GGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGGCAGCCAGGTCCCTGTaGATGCACTTCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPEAARSL*MHFWEA
Trigger: GGCCTCCCAGAAGTGCATCCACAGGGACCTGGCTGC...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCGCAGCCAGGTCCCTGTaGATGCACTTCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRAARSL*MHFWEA
Trigger: GGCCTCCCAGAAGTGCATCCACAGGGACCTGGCTGC...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGCCGCCGCGGGCAGCCGGCCGTTaGTCGTCTTCTTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLGRLAGVEGVVQARGPPRAAGR*SSSCSS
Trigger: ACTACTACAAGAAGACGACCAACGGCCGGCTGCCCG...CGGCGGCCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp GCTCCCATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGAGCTGGGGGTGTCCTaGCCACCCGGGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: APIWGRQAARARRHWPAWELGVS*PPGEYC
Trigger: GCAGTACTCCCCGGGTGGCCAGGACACCCCCAGCTC...CCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGAGCTGGGGGTGTCCTaGCCACCCGGGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAELGVS*PPGEYC
Trigger: GCAGTACTCCCCGGGTGGCCAGGACACCCCCAGCTC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGCACCAGCAGCAGGGTaGGCTGCTAGGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRAPAAG*AARDPS
Trigger: TGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGCTCAGCTTTGGGTGTaGGAGGGGCCGAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAAQLWV*EGPRPT
Trigger: GGTGGGCCTCGGCCCCTCCCACACCCAAAGCTGAGC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCGGGCCGGCCCCTCCCTaGAAACCGTCTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGGPAPP*KPSPCL
Trigger: CAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCC...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGGCCGGCCCCTCCCTaGAAACCGTCTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKGPAPP*KPSPCL
Trigger: CAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCC...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGACCACCCTGAGCCATaGCCCTGCAGGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGDHPEP*PCRQAR
Trigger: CCTTGCTTGCCTGCAGGGCCATGGCTCAGGGTGGTC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGATCGCACCTGCCGGTTTaGGTGACACCTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGSHLPV*VTPLAT
Trigger: GGTGGCCAGAGGTGTCACCCAAACCGGCAGGTGCGA...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGACAGTACGCGCTGCGTaGGCCGCTGCCGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWTVRAA*AAAGSC
Trigger: ACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGT...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCCGTGGGGCCCTCCCCTaGGGACAGCCTTGCGATGCG +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSRGALP*GQPCDA
Trigger: CGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACG...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTCGTGGGGCCCTCCCCTaGGGACAGCCTTGCGATGCG +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGRGALP*GQPCDA
Trigger: CGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACG...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGCGATGGCCTCCGCCATaGCCACCTGGCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQRWPPP*PPGRSS
Trigger: GCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCG...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCGATGGCCTCCGCCATaGCCACCTGGCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWRWPPP*PPGRSS
Trigger: GCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCGATGGCCTCCGCCATaGCCACCTGGCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPRWPPP*PPGRSS
Trigger: GCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCG...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCATCTTCACGGCTACGGTaGCAGGCTTGGCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPSSRLR*QAWRPG
Trigger: ACCGGGCCGCCAAGCCTGTCACCGTAGCCGTGAAGA...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCACGGAGTCGTCCCCTaGGGAGCTGGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: EGELLLGRLAGVEGVVQAHGVVP*GAGAGG
Trigger: ACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTG...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGACACGGAGTCGTCCCCTaGGGAGCTGGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARHGVVP*GAGAGG
Trigger: ACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTG...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCACGGAGTCGTCCCCTaGGGAGCTGGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWHGVVP*GAGAGG
Trigger: ACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp TGGGGGTGTCCTGGCCACCCGGGGAGTACTGCTCGAAAGGCGCCGACAGGTCCACTGCCGAAGACCAACTaGTCCTGCTGGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WGCPGHPGSTARKAPTGPLPKTN*SCWPGS
Trigger: AGAGCCCGGCCAGCAGGAGCAGTTGGTCTTCGGCAG...TGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCTGGAGGGAGTGGGGTTaGCAGCGGCTGGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: EGELLLGRLAGVEGVVQAWREWG*QRLGSG
Trigger: TCCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCA...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCTGGAGGGAGTGGGGTTaGCAGCGGCTGGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCWREWG*QRLGSG
Trigger: TCCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCA...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAATGGAGGGAGTGGGGTTaGCAGCGGCTGGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQWREWG*QRLGSG
Trigger: TCCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCA...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAATGCCTCCAATGCGGTaGTCGCCGCGGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRMPPMR*SPRNSL
Trigger: CAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCAT...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGGGAACTCCACGTCGCTaGCCAGCACCGCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRGTPRR*PAPPSG
Trigger: ACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCC...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGGAACTCCACGTCGCTaGCCAGCACCGCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPGTPRR*PAPPSG
Trigger: ACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCC...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGGAACTCCACGTCGCTaGCCAGCACCGCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPGTPRR*PAPPSG
Trigger: ACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCC...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCCCTCCCCAAGGGGCTTaGCCAGGGTCAGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSGVLELMDALDSRDTCRPPQGA*PGSAGP
Trigger: GGGCCCGGCTGACCCTGGGCAAGCCCCTTGGGGAGG...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGGCTCCTCGGGCGGCTTaGAGGTGTCGAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPEAPRAA*RCRRSS
Trigger: ACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGC...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCACCCGGGGAGTACTaGTCGAAAGGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAPPGEY*SKGADR
Trigger: CCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCACAAAGGCCCCTCGGTaGTGCAGCACCAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRTKAPR*CSTSQE
Trigger: CTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGT...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAACATGCCTGCCTCCTGTaGCCCCAGGGTCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKHACLL*PQGRRP
Trigger: AGGCCTGCGACCCTGGGGGCACAGGAGGCAGGCATG...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACCTGAGCCATGGCCCTaGAGGCAAGCAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRPEPWP*RQARDS
Trigger: GCTGTCCCTTGCTTGCCTGCAGGGCCATGGCTCAGG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGTCATCTCCCGAGGATaGAGCGTCTGTCACCCGCAC +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGVISRG*SVCHPH
Trigger: GTGCGGGTGACAGACGCTCCATCCTCGGGAGATGAC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAAGGAAGCGGACGGTGTTaGCGGCCGGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEGSGRC*RPARPA
Trigger: TGCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCC...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGCACCGCCGTCTGGTTaGCCGGCAGCCCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAAAPPSG*PAAPPA
Trigger: TGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGC...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCGAGCTCGGAGACATTaGCCAGCGTGGGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIRARRH*PAWGPP
Trigger: GGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCGAGCTCGGAGACATTaGCCAGCGTGGGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWRARRH*PAWGPP
Trigger: GGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCCGAGCTCGGAGACATTaGCCAGCGTGGGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCRARRH*PAWGPP
Trigger: GGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCG...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAGCTGGGGGTGTCCTaGCCACCCGGGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQELGVS*PPGEYC
Trigger: GCAGTACTCCCCGGGTGGCCAGGACACCCCCAGCTC...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTGAGCTGGGGGTGTCCTaGCCACCCGGGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIELGVS*PPGEYC
Trigger: GCAGTACTCCCCGGGTGGCCAGGACACCCCCAGCTC...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTGAGCTGGGGGTGTCCTaGCCACCCGGGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPELGVS*PPGEYC
Trigger: GCAGTACTCCCCGGGTGGCCAGGACACCCCCAGCTC...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGGGGGCAGCAGGTCGTaGGCAAACACGGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPGGSRS*ANTESS
Trigger: GGACGACTCCGTGTTTGCCCACGACCTGCTGCCCCC...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGGGGGCAGCAGGTCGTaGGCAAACACGGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPGGSRS*ANTESS
Trigger: GGACGACTCCGTGTTTGCCCACGACCTGCTGCCCCC...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGCACCAGCAGCAGGGTaGGCTGCTAGGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAAPAAG*AARDPS
Trigger: TGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGCACCAGCAGCAGGGTaGGCTGCTAGGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPAPAAG*AARDPS
Trigger: TGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGGGTCCTCTGCTTGCATaGGTGAGACCCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRGPLLA*VRPPGA
Trigger: GGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACC...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCGGGCCGGCCCCTCCCTaGAAACCGTCTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSGPAPP*KPSPCL
Trigger: CAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCC...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CAA 72 bp TTGCCCAGGGTCAGCCGGGCCCGAGACAGCTCCCATTaGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTG +
Preference number: 4 (lower is better)
Translates to: LPRVSRARDSSH*GSAGSSSSETL
Trigger: CAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCGGGCCCGGCTGACCCTGGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
3UTR CAA 72 bp AGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTaGCACAGCAGCGGGGACACCCAGGGTACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RPLGAAAPVRRP*HSSGDTQGTSA
Trigger: TGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAAGCCCACCCCGTAGCTaGGGATGCCTGCATACACAC +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRSPPRS*GCLHTH
Trigger: GTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCT...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCCGCCACCACCAGGATaGACAGGAAGAAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPPPPPG*TGRSPP
Trigger: GGGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGCGG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCCGCCACCACCAGGATaGACAGGAAGAAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRPPPPG*TGRSPP
Trigger: GGGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGCGG...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GCTCCCATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGGACACCTGTCGCTTaGGCGGGAAGCGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: APIWGRQAARARRHWPAWGTPVA*AGSGRS
Trigger: AGATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCC...CCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGGGACACCTGTCGCTTaGGCGGGAAGCGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPGTPVA*AGSGRS
Trigger: AGATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCC...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGGGACACCTGTCGCTTaGGCGGGAAGCGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAGTPVA*AGSGRS
Trigger: AGATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCCGATGGCCTCCGCCATaGCCACCTGGCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSRWPPP*PPGRSS
Trigger: GCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCG...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCTCTTCACGGCTACGGTaGCAGGCTTGGCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: EGELLLGRLAGVEGVVQASSRLR*QAWRPG
Trigger: ACCGGGCCGCCAAGCCTGTCACCGTAGCCGTGAAGA...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTCTTCACGGCTACGGTaGCAGGCTTGGCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVSSRLR*QAWRPG
Trigger: ACCGGGCCGCCAAGCCTGTCACCGTAGCCGTGAAGA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCGCCAGCACTCCCGCATaGTCATGTACAGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRASTPA*SCTGRV
Trigger: CACACGACCTGTACATGATCATGCGGGAGTGCTGGC...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGCTGCTCGGGGCCCGTaGACGCTCAGCCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGAARGP*TLSQKA
Trigger: GGCCTTTTGGCTGAGCGTTCACGGGCCCCGAGCAGC...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340107.8
CDS-3UTR GCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACATGCCTCCAATGCGGTaGTCGCCGCGGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHMPPMR*SPRNSL
Trigger: CAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCAT...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGGAACTCCACGTCGCTaGCCAGCACCGCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQGTPRR*PAPPSG
Trigger: ACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCC...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGATGCCTGCATACACACTaGCCGCCTCGTCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRCLHTH*PPRQPP
Trigger: TGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCA...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGRTALR*APVVCW
Trigger: CCAACACACCACTGGTGCGCATCGCAAGGCTGTCCT...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCCCAGGTCCCTGTGGATaGACTTCTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRPGPCG*TSGRPS
Trigger: ACTTGGCCTCCCAGAAGTGCATCCACAGGGACCTGG...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCCACCCGGGGAGTACTaGTCGAAAGGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPPPGEY*SKGADR
Trigger: CCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGG...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGCCACCCGGGGAGTACTaGTCGAAAGGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVPPGEY*SKGADR
Trigger: CCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGG...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCAAGGCCCCTCGGTGCTaGAGCACCAGTCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAKAPRC*STSQET
Trigger: GGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTT...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCCATGCCTGCCTCCTGTaGCCCCAGGGTCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSHACLL*PQGRRP
Trigger: AGGCCTGCGACCCTGGGGGCACAGGAGGCAGGCATG...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAGCCCAGGGCCATGCCTaGCTCCTGTGCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKAQGHA*LLCPQG
Trigger: ACCCTGGGGGCACAGGAGGCAGGCATGGCCCTGGGC...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCCTGGTCCTCTGCTTaGATGGGTGAGACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAPWSSA*MGETPW
Trigger: CCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp AGCCTTGCGATGCGCACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCGGGGTTGCCAGCGGCTaGGCAGCGGAAGCGGACGGT +
Preference number: 4 (lower is better)
Translates to: SLAMRTSGVLELMDALDSGVASG*AAEADG
Trigger: ACCGTCCGCTTCCGCTGCCCAGCCGCTGGCAACCCC...GGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTGGGGTTGCCAGCGGCTaGGCAGCGGAAGCGGACGGT +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCGVASG*AAEADG
Trigger: ACCGTCCGCTTCCGCTGCCCAGCCGCTGGCAACCCC...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAGGGGTTGCCAGCGGCTaGGCAGCGGAAGCGGACGGT +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKGVASG*AAEADG
Trigger: ACCGTCCGCTTCCGCTGCCCAGCCGCTGGCAACCCC...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCCCCGCTCCGACACATTaGCCAGGCGGAGGCGCACGT +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSPAPTH*PGGGAR
Trigger: ACGTGCGCCTCCGCCTGGCCAATGTGTCGGAGCGGG...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340107.8
CDS-3UTR CCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGTGTGTTGGAGCTCATaGACGCGTTGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGVCWSS*TRWTPG
Trigger: CCCTGGAGTCCAACGCGTCCATGAGCTCCAACACAC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCAGACATTGGCCAGCGTaGGGCCCTCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVARHWPA*GPPLRT
Trigger: TGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCT...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTCCGCCATGACCACCTaGCCGAAGCAGCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVSAMTT*PKQPSP
Trigger: TGGGGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTTCCGCCATGACCACCTaGCCGAAGCAGCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPSAMTT*PKQPSP
Trigger: TGGGGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGA...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTTCCGCCATGACCACCTaGCCGAAGCAGCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAISAMTT*PKQPSP
Trigger: TGGGGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGA...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGCAGCCAGGTCCCTGTaGATGCACTTCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAAARSL*MHFWEA
Trigger: GGCCTCCCAGAAGTGCATCCACAGGGACCTGGCTGC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGCAGCCAGGTCCCTGTaGATGCACTTCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPAARSL*MHFWEA
Trigger: GGCCTCCCAGAAGTGCATCCACAGGGACCTGGCTGC...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGCAGCCAGGTCCCTGTaGATGCACTTCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPAARSL*MHFWEA
Trigger: GGCCTCCCAGAAGTGCATCCACAGGGACCTGGCTGC...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAAGAGCTGGGGGTGTCCTaGCCACCCGGGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEELGVS*PPGEYC
Trigger: GCAGTACTCCCCGGGTGGCCAGGACACCCCCAGCTC...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGGGGGGCAGCAGGTCGTaGGCAAACACGGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWGGSRS*ANTESS
Trigger: GGACGACTCCGTGTTTGCCCACGACCTGCTGCCCCC...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCGGGGGCAGCAGGTCGTaGGCAAACACGGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGGGSRS*ANTESS
Trigger: GGACGACTCCGTGTTTGCCCACGACCTGCTGCCCCC...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGCACCAGCAGCAGGGTaGGCTGCTAGGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQAPAAG*AARDPS
Trigger: TGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGGGGGTCCCACCGGGTaGGCCCACTTACATTCTGCA +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAGGPTG*AHLHSA
Trigger: TGCAGAATGTAAGTGGGCCCACCCGGTGGGACCCCC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGGGGGGTCCCACCGGGTaGGCCCACTTACATTCTGCA +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRGGPTG*AHLHSA
Trigger: TGCAGAATGTAAGTGGGCCCACCCGGTGGGACCCCC...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCCTGTGATGTCCCGTaGTGCAAAGGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAPCDVP*CKGRGR
Trigger: CCGGCCTCTGCCTTTGCACCACGGGACATCACAGGG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCACCCTGTGATGTCCCGTaGTGCAAAGGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPPCDVP*CKGRGR
Trigger: CCGGCCTCTGCCTTTGCACCACGGGACATCACAGGG...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCCTGCAGGCTCAGCTTTaGGTGTGGGAGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCLQAQL*VWEGPR
Trigger: CCTCGGCCCCTCCCACACCCAAAGCTGAGCCTGCAG...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCGGTCCTCTGCTTGCATaGGTGAGACCCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCGPLLA*VRPPGA
Trigger: GGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACC...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAGGTCCTCTGCTTGCATaGGTGAGACCCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARGPLLA*VRPPGA
Trigger: GGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACC...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGACCACCCTGAGCCATaGCCCTGCAGGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPDHPEP*PCRQAR
Trigger: CCTTGCTTGCCTGCAGGGCCATGGCTCAGGGTGGTC...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CAA 72 bp CATTGGCCAGCGTGGGGCCCTCCCCTGAGGACAGCCTaGCGATGCGCACCAGTGGTGTGTTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: HWPAWGPPLRTA*RCAPVVCWSSW
Trigger: CCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCTGTCACCCGCACACTaGAGTGGCACAGTACGCGCT +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPLSPAH*SGTVRA
Trigger: AGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCACTGTCACCCGCACACTaGAGTGGCACAGTACGCGCT +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPLSPAH*SGTVRA
Trigger: AGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAG...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGTCTCGGCCACGCCTATaGAATTGGTGGCTCGACAGA +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPESRPRL*NWWLDR
Trigger: TCTGTCGAGCCACCAATTTCATAGGCGTGGCCGAGA...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGCGGCGTCCTCAAAGGTaGCGTTGTGCAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPERRPQR*RCARRE
Trigger: TTCTCTCCTTGCACAACGTCACCTTTGAGGACGCCG...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAAGCCCACCCCGTAGCTaGGGATGCCTGCATACACAC +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPSPPRS*GCLHTH
Trigger: GTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCT...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGCCGCCACCACCAGGATaGACAGGAAGAAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQPPPPG*TGRSPP
Trigger: GGGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGCGG...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGACCGCCACCACCAGGATaGACAGGAAGAAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARPPPPG*TGRSPP
Trigger: GGGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGCGG...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCCCGCCACCACCAGGATaGACAGGAAGAAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCPPPPG*TGRSPP
Trigger: GGGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGCGG...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp TGGGGGTGTCCTGGCCACCCGGGGAGTACTGCTCGAAAGGCGCCGACAGGTCCAGCCAGCACTCCCGCATaGTCATGTACAGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: WGCPGHPGSTARKAPTGPASTPA*SCTGRV
Trigger: CACACGACCTGTACATGATCATGCGGGAGTGCTGGC...TGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAACCGAGGCCCACCCTGTaGTGTCCCGTGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEPRPTL*CPVVQR
Trigger: CCTTTGCACCACGGGACATCACAGGGTGGGCCTCGG...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACTCTGCTTGCATGGGTaGGACCCCCTGGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKLCLHG*DPLGPP
Trigger: GGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACAAGAAGAGACCACCCTaGGCCATGGCCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHKKRPP*AMALQA
Trigger: TGCCTGCAGGGCCATGGCTCAGGGTGGTCTCTTCTT...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAACACCTGCTGTCGCTTaGGCGGGAAGCGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPTPAVA*AGSGRS
Trigger: AGATCTCCCGCTTCCCGCTCAAGCGACAGCAGGTGT...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS-3UTR GCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGCGCCCCACGACGCGCTaGTCCGTCCCCAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLRPTTR*SVPKDS
Trigger: GGAGTCCTTGGGGACGGAGCAGCGCGTCGTGGGGCG...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAACTGCCGAAGACCAACTaGTCCTGCTGGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKLPKTN*SCWPGS
Trigger: AGAGCCCGGCCAGCAGGAGCAGTTGGTCTTCGGCAG...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGCTGCCGAAGACCAACTaGTCCTGCTGGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVLPKTN*SCWPGS
Trigger: AGAGCCCGGCCAGCAGGAGCAGTTGGTCTTCGGCAG...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCCGAAGACCAACTaGTCCTGCTGGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPLPKTN*SCWPGS
Trigger: AGAGCCCGGCCAGCAGGAGCAGTTGGTCTTCGGCAG...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCTGCCGAAGACCAACTaGTCCTGCTGGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAILPKTN*SCWPGS
Trigger: AGAGCCCGGCCAGCAGGAGCAGTTGGTCTTCGGCAG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCCACAGCATCCCCGCTaGCGAAGACCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPPQHPR*RRPTAP
Trigger: AGGAGCAGTTGGTCTTCGGCAGCGGGGATGCTGTGG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGATGCCTCCAATGCGGTaGTCGCCGCGGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQMPPMR*SPRNSL
Trigger: CAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCAT...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGATGCCTCCAATGCGGTaGTCGCCGCGGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWMPPMR*SPRNSL
Trigger: CAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCAT...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGTCCGGGCCCACCTTaGTGCCATTCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: EGELLLGRLAGVEGVVQARPGPP*CHSPPR
Trigger: ACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACG...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGACGTCCGGGCCCACCTTaGTGCCATTCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARRPGPP*CHSPPR
Trigger: ACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACG...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCGTCCGGGCCCACCTTaGTGCCATTCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWRPGPP*CHSPPR
Trigger: ACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCGTCCGGGCCCACCTTaGTGCCATTCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIRPGPP*CHSPPR
Trigger: ACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCATGCCTGCATACACACTaGCCGCCTCGTCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPCLHTH*PPRQPP
Trigger: TGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCA...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp TGGGGGTGTCCTGGCCACCCGGGGAGTACTGCTCGAAAGGCGCCGACAGGTCCAGTAGCTGAGGATGCCTaGATACACACTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: WGCPGHPGSTARKAPTGPVAEDA*IHTARL
Trigger: GAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTAC...TGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAAAGCGGGAGATCTTGTaGACGGTGGGGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARKREIL*TVGEPR
Trigger: CCTGGGCTCCCCCACCGTGCACAAGATCTCCCGCTT...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp TGGGGGTGTCCTGGCCACCCGGGGAGTACTGCTCGAAAGGCGCCGACAGGTCCAAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: WGCPGHPGSTARKAPTGPRTALR*APVVCW
Trigger: CCAACACACCACTGGTGCGCATCGCAAGGCTGTCCT...TGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACCAGGTCCCTGTGGATaGACTTCTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRPGPCG*TSGRPS
Trigger: ACTTGGCCTCCCAGAAGTGCATCCACAGGGACCTGG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCACCCAGGGTACCTCTaGACCTGGAGGCAAGATGCG +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRHPGYL*TWRQDA
Trigger: CGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTG...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCCAGTCAGGAGACCGTTaGACAGCAGCGGGGACACCC +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCQSGDR*TAAGTP
Trigger: GGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTG...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCAAGGCCCCTCGGTGCTaGAGCACCAGTCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGKAPRC*STSQET
Trigger: GGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTT...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCATGTGATGTCCCGTGGTaGAAAGGCAGAGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPCDVPW*KGRGRS
Trigger: GCTCCGGCCTCTGCCTTTGCACCACGGGACATCACA...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACTGTGATGTCCCGTGGTaGAAAGGCAGAGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHCDVPW*KGRGRS
Trigger: GCTCCGGCCTCTGCCTTTGCACCACGGGACATCACA...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGACCCTGGTCCTCTGCTTaGATGGGTGAGACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARPWSSA*MGETPW
Trigger: CCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGG...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAAATAACATCGGAACCTaGACACAGGGCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRNNIGT*TQGRPL
Trigger: GAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATT...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCCCATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGACCCGCACACTGAAGTaGCACAGTACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: APIWGRQAARARRHWPAWTRTLK*HSTRCV
Trigger: CACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGT...CCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCACCCGCACACTGAAGTaGCACAGTACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPTRTLK*HSTRCV
Trigger: CACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGT...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGTCATCTCCCGAGGATaGAGCGTCTGTCACCCGCAC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAVISRG*SVCHPH
Trigger: GTGCGGGTGACAGACGCTCCATCCTCGGGAGATGAC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGAGACATTGGCCAGCGTaGGGCCCTCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQRHWPA*GPPLRT
Trigger: TGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCT...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCAGACATTGGCCAGCGTaGGGCCCTCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCRHWPA*GPPLRT
Trigger: TGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCT...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAAGACATTGGCCAGCGTaGGGCCCTCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKRHWPA*GPPLRT
Trigger: TGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCT...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCCGAGCTCGGAGACATTaGCCAGCGTGGGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TSGVLELMDALDSRDTCRRARRH*PAWGPP
Trigger: GGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCG...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGCCCGCAGGTTACCCTTaGCCGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVPAGYP*PRTPPA
Trigger: TGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGG...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCCCCGCAGGTTACCCTTaGCCGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGPAGYP*PRTPPA
Trigger: TGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGG...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCATTGTTGGGGACCAGTaGCCCTTCACGTCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAIVGDQ*PFTSAS
Trigger: GCTCGCGGACGTGAAGGGCCACTGGTCCCCAACAAT...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAAGCACCAGCAGCAGGGTaGGCTGCTAGGGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEAPAAG*AARDPS
Trigger: TGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGGGTACCTCTGCACCTaGAGGCAAGATGCGCACGCA +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHGYLCT*RQDAHA
Trigger: TGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCC...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAGGGGGTCCCACCGGGTaGGCCCACTTACATTCTGCA +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARGGPTG*AHLHSA
Trigger: TGCAGAATGTAAGTGGGCCCACCCGGTGGGACCCCC...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCCCCTGTGATGTCCCGTaGTGCAAAGGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGPCDVP*CKGRGR
Trigger: CCGGCCTCTGCCTTTGCACCACGGGACATCACAGGG...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAACTGCAGGCTCAGCTTTaGGTGTGGGAGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLELQAQL*VWEGPR
Trigger: CCTCGGCCCCTCCCACACCCAAAGCTGAGCCTGCAG...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCCAGGCACAAGGTGCTaGACATGTGGGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRPGTRC*TCGASL
Trigger: CAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGG...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTGGGAAAGCCTGGAGGTaGGGAGGCGGTGCCACTAAC +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPGKAWR*GGGATN
Trigger: GTTAGTGGCACCGCCTCCCCACCTCCAGGCTTTCCC...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAGGGAAAGCCTGGAGGTaGGGAGGCGGTGCCACTAAC +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARGKAWR*GGGATN
Trigger: GTTAGTGGCACCGCCTCCCCACCTCCAGGCTTTCCC...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGACTGGACGTACATTCTTaGCCGTCCCTCTATCGGCGG +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRLDVHS*PSLYRR
Trigger: CCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAG...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAATCGCACCTGCCGGTTTaGGTGACACCTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKSHLPV*VTPLAT
Trigger: GGTGGCCAGAGGTGTCACCCAAACCGGCAGGTGCGA...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCTCGCACCTGCCGGTTTaGGTGACACCTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGSHLPV*VTPLAT
Trigger: GGTGGCCAGAGGTGTCACCCAAACCGGCAGGTGCGA...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAAGCCCACCCCGTAGCTaGGGATGCCTGCATACACAC +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARSPPRS*GCLHTH
Trigger: GTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCT...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGGGACACCTGTCGCTTaGGCGGGAAGCGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGGTPVA*AGSGRS
Trigger: AGATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCC...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGCCAGCACTCCCGCATaGTCATGTACAGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAASTPA*SCTGRV
Trigger: CACACGACCTGTACATGATCATGCGGGAGTGCTGGC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCTCTCTCCATCTGCACTaGGTCTCATGCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVASLHLH*VSCRGV
Trigger: CACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGA...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGCTCTGCTTGCATGGGTaGGACCCCCTGGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLLCLHG*DPLGPP
Trigger: GGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAG...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTAAGAAGAGACCACCCTaGGCCATGGCCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPKKRPP*AMALQA
Trigger: TGCCTGCAGGGCCATGGCTCAGGGTGGTCTCTTCTT...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGCCACAGCATCCCCGCTaGCGAAGACCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQPQHPR*RRPTAP
Trigger: AGGAGCAGTTGGTCTTCGGCAGCGGGGATGCTGTGG...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCCCACAGCATCCCCGCTaGCGAAGACCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCPQHPR*RRPTAP
Trigger: AGGAGCAGTTGGTCTTCGGCAGCGGGGATGCTGTGG...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGGAGGGAGTGGGGTTaGCAGCGGCTGGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLWREWG*QRLGSG
Trigger: TCCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCA...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGTAGCTGAGGATGCCTaGATACACACTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHVAEDA*IHTARL
Trigger: GAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTAC...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGTCAAGCGGGAGATCTTGTaGACGGTGGGGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RQVQVLVGGRHGKDTVQVKREIL*TVGEPR
Trigger: CCTGGGCTCCCCCACCGTGCACAAGATCTCCCGCTT...GACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPRTALR*APVVCW
Trigger: CCAACACACCACTGGTGCGCATCGCAAGGCTGTCCT...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCGCTCCTCGGGCGGCTTaGAGGTGTCGAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGAPRAA*RCRRSS
Trigger: ACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGC...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCTCCTCGGGCGGCTTaGAGGTGTCGAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVAPRAA*RCRRSS
Trigger: ACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGC...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCTCCTTGAAGGTGAGCTaGTCCTCGGGCGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: EGELLLGRLAGVEGVVQASLKVS*SSGGLQ
Trigger: CTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGA...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTCCTTGAAGGTGAGCTaGTCCTCGGGCGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVSLKVS*SSGGLQ
Trigger: CTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTTCCTTGAAGGTGAGCTaGTCCTCGGGCGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAISLKVS*SSGGLQ
Trigger: CTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGA...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAATCCTTGAAGGTGAGCTaGTCCTCGGGCGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKSLKVS*SSGGLQ
Trigger: CTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGA...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCCAGGTCCCTGTGGATaGACTTCTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPPGPCG*TSGRPS
Trigger: ACTTGGCCTCCCAGAAGTGCATCCACAGGGACCTGG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp TGGGGGTGTCCTGGCCACCCGGGGAGTACTGCTCGAAAGGCGCCGACAGGTCCATGTACAGGTCGTGTGTaGAGTTGGCGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: WGCPGHPGSTARKAPTGPCTGRV*SWRACP
Trigger: TGGACAAGCCCGCCAACTGCACACACGACCTGTACA...TGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGATGTACAGGTCGTGTGTaGAGTTGGCGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRCTGRV*SWRACP
Trigger: TGGACAAGCCCGCCAACTGCACACACGACCTGTACA...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCCCACCCGGGGAGTACTaGTCGAAAGGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: TSGVLELMDALDSRDTCRPPGEY*SKGADR
Trigger: CCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGG...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAACACCTGGAGGCAAGATaGGCACGCACACAGGCACAC +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQHLEAR*ARTQAH
Trigger: GTGTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTG...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCCAGTCAGGAGACCGTTaGACAGCAGCGGGGACACCC +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSQSGDR*TAAGTP
Trigger: GGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTG...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACAAAGGCCCCTCGGTaGTGCAGCACCAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCTKAPR*CSTSQE
Trigger: CTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGT...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTTGTGATGTCCCGTGGTaGAAAGGCAGAGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAICDVPW*KGRGRS
Trigger: GCTCCGGCCTCTGCCTTTGCACCACGGGACATCACA...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCACATGTGGGGCTTCCCTaGAGGCTCAGCTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPHVGLP*RLSFGC
Trigger: ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATG...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGATGGAAACCGTCTCCCTaGCTGGGACACACAGCAATT +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGWKPSP*LGHTAI
Trigger: AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCA...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGATGAACAGGAAGAAGCCCACCCCGTAGCTGAGGATGCCTGCATACACACTCTGCTGGCCGGGCTCTaGGCCCGGGACTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QDEQEEAHPVAEDACIHTLLAGL*ARDFCR
Trigger: GCGGCAGAAGTCCCGGGCCCAGAGCCCGGCCAGCAG...AGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTCATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTACCCGCACACTGAAGTaGCACAGTACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPTRTLK*HSTRCV
Trigger: CACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGT...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGACCCGCACACTGAAGTaGCACAGTACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVTRTLK*HSTRCV
Trigger: CACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGT...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAACCCGCACACTGAAGTaGCACAGTACGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQTRTLK*HSTRCV
Trigger: CACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGT...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGTCATCTCCCGAGGATaGAGCGTCTGTCACCCGCAC +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKVISRG*SVCHPH
Trigger: GTGCGGGTGACAGACGCTCCATCCTCGGGAGATGAC...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCCCATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGAGCTCATGGACGCGTTaGACTCCAGGGACACCTGTC +
Preference number: 4 (lower is better)
Translates to: APIWGRQAARARRHWPAWSSWTR*TPGTPV
Trigger: GACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCT...CCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAAGCTCATGGACGCGTTaGACTCCAGGGACACCTGTC +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPSSWTR*TPGTPV
Trigger: GACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCT...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGTGTGTTGGAGCTCATaGACGCGTTGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAVCWSS*TRWTPG
Trigger: CCCTGGAGTCCAACGCGTCCATGAGCTCCAACACAC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGCACCAGTGGTGTGTTaGAGCTCATGGACGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAAPVVC*SSWTRW
Trigger: CCAACGCGTCCATGAGCTCCAACACACCACTGGTGC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCGAGACAGCTCCCATTTaGGGTCGGCAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: EGELLLGRLAGVEGVVQAETAPI*GRQAAR
Trigger: TCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTC...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGAGACAGCTCCCATTTaGGGTCGGCAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVETAPI*GRQAAR
Trigger: TCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTC...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAATCCGCCATGACCACCTaGCCGAAGCAGCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKSAMTT*PKQPSP
Trigger: TGGGGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGA...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGTCCCCGCAGGTTACCCTTaGCCGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RQVQVLVGGRHGKDTVQVPAGYP*PRTPPA
Trigger: TGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGG...GACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTCCCGCAGGTTACCCTTaGCCGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGPAGYP*PRTPPA
Trigger: TGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGG...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCCTGTGGATGCACTTCTaGGAGGCCAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: RPWSSACMGETPWGLPPRLWMHF*EAKYSM
Trigger: CATGGAGTACTTGGCCTCCCAGAAGTGCATCCACAG...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGGGCAGCCGGCCGTTaGTCGTCTTCTTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVARAAGR*SSSCSS
Trigger: ACTACTACAAGAAGACGACCAACGGCCGGCTGCCCG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp AGCCTTGCGATGCGCACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCGGGGGCAGCAGGTCGTaGGCAAACACGGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SLAMRTSGVLELMDALDSGGSRS*ANTESS
Trigger: GGACGACTCCGTGTTTGCCCACGACCTGCTGCCCCC...GGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCATTGTTGGGGACCAGTaGCCCTTCACGTCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGIVGDQ*PFTSAS
Trigger: GCTCGCGGACGTGAAGGGCCACTGGTCCCCAACAAT...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGGTACCTCTGCACCTaGAGGCAAGATGCGCACGCA +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKGYLCT*RQDAHA
Trigger: TGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCC...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAGGGTACCTCTGCACCTaGAGGCAAGATGCGCACGCA +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARGYLCT*RQDAHA
Trigger: TGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCC...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCGGGGGTCCCACCGGGTaGGCCCACTTACATTCTGCA +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSGGPTG*AHLHSA
Trigger: TGCAGAATGTAAGTGGGCCCACCCGGTGGGACCCCC...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACTGCAGGCTCAGCTTTaGGTGTGGGAGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKLQAQL*VWEGPR
Trigger: CCTCGGCCCCTCCCACACCCAAAGCTGAGCCTGCAG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAACCAGGCACAAGGTGCTaGACATGTGGGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKPGTRC*TCGASL
Trigger: CAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGG...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGGGAAGTGTTGGGGTGTaGGAACAAGAGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRGSVGV*EQECQG
Trigger: CCCCTGGCACTCTTGTTCCCACACCCCAACACTTCC...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGGAAGTGTTGGGGTGTaGGAACAAGAGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHGSVGV*EQECQG
Trigger: CCCCTGGCACTCTTGTTCCCACACCCCAACACTTCC...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGATGGCCAGCTAAATGCTaGAAGTGTTGGGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGWPAKC*KCWGVG
Trigger: TCCCACACCCCAACACTTCCAGCATTTAGCTGGCCA...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCACTGGACGTACATTCTTaGCCGTCCCTCTATCGGCGG +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPLDVHS*PSLYRR
Trigger: CCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAG...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTAGCTCCGGGGCAGGCTaGACGTACATTCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPSSGAG*TYILGR
Trigger: ACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAGCT...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCGACCACCCTGAGCCATaGCCCTGCAGGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSDHPEP*PCRQAR
Trigger: CCTTGCTTGCCTGCAGGGCCATGGCTCAGGGTGGTC...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTACAGTACGCGCTGCGTaGGCCGCTGCCGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRTVRAA*AAAGSC
Trigger: ACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGT...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCACGGCGTCCTCAAAGGTaGCGTTGTGCAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPRRPQR*RCARRE
Trigger: TTCTCTCCTTGCACAACGTCACCTTTGAGGACGCCG...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACCGGCGTCCTCAAAGGTaGCGTTGTGCAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHRRPQR*RCARRE
Trigger: TTCTCTCCTTGCACAACGTCACCTTTGAGGACGCCG...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGCCAGCACTCCCGCATaGTCATGTACAGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQASTPA*SCTGRV
Trigger: CACACGACCTGTACATGATCATGCGGGAGTGCTGGC...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGTCTCTCCATCTGCACTaGGTCTCATGCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWSLHLH*VSCRGV
Trigger: CACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGA...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCGTAATTTCAGTCTCTaGGGGGCAGGGTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPRNFSL*GAGWEV
Trigger: CACTTCCCACCCTGCCCCTCAGAGACTGAAATTACG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR TCA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCACGTAATTTCAGTCTCTaGGGGGCAGGGTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPRNFSL*GAGWEV
Trigger: CACTTCCCACCCTGCCCCTCAGAGACTGAAATTACG...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAAAAGAAGAGACCACCCTaGGCCATGGCCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEKKRPP*AMALQA
Trigger: TGCCTGCAGGGCCATGGCTCAGGGTGGTCTCTTCTT...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTCCACAGCATCCCCGCTaGCGAAGACCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGPQHPR*RRPTAP
Trigger: AGGAGCAGTTGGTCTTCGGCAGCGGGGATGCTGTGG...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAACCACAGCATCCCCGCTaGCGAAGACCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEPQHPR*RRPTAP
Trigger: AGGAGCAGTTGGTCTTCGGCAGCGGGGATGCTGTGG...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGGGAACTCCACGTCGCTaGCCAGCACCGCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLGTPRR*PAPPSG
Trigger: ACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCC...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCACGTCCGGGCCCACCTTaGTGCCATTCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAARPGPP*CHSPPR
Trigger: ACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACG...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGGTCTGCCTGCATACACACTaGCCGCCTCGTCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQVQVLVGGRHGKDTVQVCLHTH*PPRQPP
Trigger: TGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCA...GACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAATGCCTGCATACACACTaGCCGCCTCGTCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLECLHTH*PPRQPP
Trigger: TGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCA...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCTGCCTGCATACACACTaGCCGCCTCGTCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSCLHTH*PPRQPP
Trigger: TGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCA...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGTAGCTGAGGATGCCTaGATACACACTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVVAEDA*IHTARL
Trigger: GAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTAC...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTGTAGCTGAGGATGCCTaGATACACACTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPVAEDA*IHTARL
Trigger: GAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTAC...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCGTAGCTGAGGATGCCTaGATACACACTGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCVAEDA*IHTARL
Trigger: GAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTAC...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTAAGCGGGAGATCTTGTaGACGGTGGGGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCKREIL*TVGEPR
Trigger: CCTGGGCTCCCCCACCGTGCACAAGATCTCCCGCTT...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVRTALR*APVVCW
Trigger: CCAACACACCACTGGTGCGCATCGCAAGGCTGTCCT...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGCTCCTCGGGCGGCTTaGAGGTGTCGAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGAPRAA*RCRRSS
Trigger: ACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGC...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAATCCTTGAAGGTGAGCTaGTCCTCGGGCGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLESLKVS*SSGGLQ
Trigger: CTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGA...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GAAGGTGAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCCAGGTCCCTGTGGATaGACTTCTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: EGELLLGRLAGVEGVVQAPGPCG*TSGRPS
Trigger: ACTTGGCCTCCCAGAAGTGCATCCACAGGGACCTGG...GGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAACCAGGTCCCTGTGGATaGACTTCTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKPGPCG*TSGRPS
Trigger: ACTTGGCCTCCCAGAAGTGCATCCACAGGGACCTGG...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCAGCTGTCTCTCCATCTaGACTGAGTCTCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVASCLSI*TESHAG
Trigger: CCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCT...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCACAAAGGCCCCTCGGTaGTGCAGCACCAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSTKAPR*CSTSQE
Trigger: CTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGT...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCATGTGGGGCTTCCCTaGAGGCTCAGCTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWHVGLP*RLSFGC
Trigger: ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCATGTGGGGCTTCCCTaGAGGCTCAGCTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPHVGLP*RLSFGC
Trigger: ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATG...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAAATAACATCGGAACCTaGACACAGGGCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQNNIGT*TQGRPL
Trigger: GAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATT...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACCTGAGCCATGGCCCTaGAGGCAAGCAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKPEPWP*RQARDS
Trigger: GCTGTCCCTTGCTTGCCTGCAGGGCCATGGCTCAGG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGATGAACAGGAAGAAGCCCACCCCGTAGCTGAGGATGCCTGCATACACACTGGAAGCGGACGGTGTTaGCGGCCGGCACGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QDEQEEAHPVAEDACIHTGSGRC*RPARPA
Trigger: TGCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCC...AGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTCATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGAGCTCATGGACGCGTTaGACTCCAGGGACACCTGTC +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVSSWTR*TPGTPV
Trigger: GACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCT...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGGCACCAGTGGTGTGTTaGAGCTCATGGACGCGTTGG +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWAPVVC*SSWTRW
Trigger: CCAACGCGTCCATGAGCTCCAACACACCACTGGTGC...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTGCACCAGTGGTGTGTTaGAGCTCATGGACGCGTTGG +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPAPVVC*SSWTRW
Trigger: CCAACGCGTCCATGAGCTCCAACACACCACTGGTGC...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCGAGACAGCTCCCATTTaGGGTCGGCAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSETAPI*GRQAAR
Trigger: TCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTC...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTCCGCCATGACCACCTaGCCGAAGCAGCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLSAMTT*PKQPSP
Trigger: TGGGGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGA...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACCCGCAGGTTACCCTTaGCCGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKPAGYP*PRTPPA
Trigger: TGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTGCAGCCAGGTCCCTGTaGATGCACTTCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCAARSL*MHFWEA
Trigger: GGCCTCCCAGAAGTGCATCCACAGGGACCTGGCTGC...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCCGGGCAGCCGGCCGTTaGTCGTCTTCTTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCRAAGR*SSSCSS
Trigger: ACTACTACAAGAAGACGACCAACGGCCGGCTGCCCG...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCGGGCAGCCGGCCGTTaGTCGTCTTCTTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIRAAGR*SSSCSS
Trigger: ACTACTACAAGAAGACGACCAACGGCCGGCTGCCCG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGACCCCTCACATTGTTaGGGACCAGTGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVDPSHC*GPVALH
Trigger: GTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTC...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGACCCCTCACATTGTTaGGGACCAGTGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQDPSHC*GPVALH
Trigger: GTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTC...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCGGGTACCTCTGCACCTaGAGGCAAGATGCGCACGCA +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSGYLCT*RQDAHA
Trigger: TGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCC...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTGCTCAGCTTTGGGTGTaGGAGGGGCCGAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRAQLWV*EGPRPT
Trigger: GGTGGGCCTCGGCCCCTCCCACACCCAAAGCTGAGC...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAAAGGTGCTGGACATGTaGGGCTTCCCTGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKKVLDM*GFPAGS
Trigger: TGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTT...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAGGAAGTGTTGGGGTGTaGGAACAAGAGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARGSVGV*EQECQG
Trigger: CCCCTGGCACTCTTGTTCCCACACCCCAACACTTCC...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGACTGGACGTACATTCTTaGCCGTCCCTCTATCGGCGG +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARLDVHS*PSLYRR
Trigger: CCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAG...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTAGCTCCGGGGCAGGCTaGACGTACATTCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGSSGAG*TYILGR
Trigger: ACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAGCT...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CAA 72 bp CCTGAGGACAGCCTTGCGATGCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTGGACTCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: PEDSLAMRTSGV*ELMDALDSRDT
Trigger: GGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp CAGGATGAACAGGAAGAAGCCCACCCCGTAGCTGAGGATGCCTGCATACACACTACAGTACGCGCTGCGTaGGCCGCTGCCGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QDEQEEAHPVAEDACIHTTVRAA*AAAGSC
Trigger: ACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGT...AGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp AGCCTTGCGATGCGCACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCCTGTCACCCGCACACTaGAGTGGCACAGTACGCGCT +
Preference number: 4 (lower is better)
Translates to: SLAMRTSGVLELMDALDSLSPAH*SGTVRA
Trigger: AGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAG...GGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACTGTCACCCGCACACTaGAGTGGCACAGTACGCGCT +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKLSPAH*SGTVRA
Trigger: AGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTCTGTCACCCGCACACTaGAGTGGCACAGTACGCGCT +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCLSPAH*SGTVRA
Trigger: AGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAG...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTTCTCGGCCACGCCTATaGAATTGGTGGCTCGACAGA +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAISRPRL*NWWLDR
Trigger: TCTGTCGAGCCACCAATTTCATAGGCGTGGCCGAGA...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340107.8
CDS-3UTR TCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTTCTTCACGGCTACGGTaGCAGGCTTGGCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRSSRLR*QAWRPG
Trigger: ACCGGGCCGCCAAGCCTGTCACCGTAGCCGTGAAGA...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCCGTAATTTCAGTCTCTaGGGGGCAGGGTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGRNFSL*GAGWEV
Trigger: CACTTCCCACCCTGCCCCTCAGAGACTGAAATTACG...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACCTTCCCTCCAAGCTTTaGAAGGTAGCAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHLPSKL*KVAVQA
Trigger: AGCCTGGACTGCTACCTTTCAAAGCTTGGAGGGAAG...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGCTGCCGAAGACCAACTaGTCCTGCTGGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLLPKTN*SCWPGS
Trigger: AGAGCCCGGCCAGCAGGAGCAGTTGGTCTTCGGCAG...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTCCACAGCATCCCCGCTaGCGAAGACCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCPQHPR*RRPTAP
Trigger: AGGAGCAGTTGGTCTTCGGCAGCGGGGATGCTGTGG...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGATGTACGTCTGCCGGATaGTGCCAAACTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GCGRGRGPPCDVPWCKGRCTSAG*CQTCSP
Trigger: TGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACA...TCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGTCAAAGGTGACGTTGTaGAAGGAGAGAACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPESKVTL*KERTSS
Trigger: GCTAGAGGTTCTCTCCTTGCACAACGTCACCTTTGA...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCCCAGGTCCCTGTGGATaGACTTCTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSPGPCG*TSGRPS
Trigger: ACTTGGCCTCCCAGAAGTGCATCCACAGGGACCTGG...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTGTACAGGTCGTGTGTaGAGTTGGCGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVCTGRV*SWRACP
Trigger: TGGACAAGCCCGCCAACTGCACACACGACCTGTACA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAATGTACAGGTCGTGTGTaGAGTTGGCGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKCTGRV*SWRACP
Trigger: TGGACAAGCCCGCCAACTGCACACACGACCTGTACA...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGCTGTCTCTCCATCTaGACTGAGTCTCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAISCLSI*TESHAG
Trigger: CCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCT...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAAGCTGTCTCTCCATCTaGACTGAGTCTCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKSCLSI*TESHAG
Trigger: CCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCT...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCAGCTGTCTCTCCATCTaGACTGAGTCTCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCSCLSI*TESHAG
Trigger: CCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCT...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCACACCTGGAGGCAAGATaGGCACGCACACAGGCACAC +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAAHLEAR*ARTQAH
Trigger: GTGTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTG...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTTGTGATGTCCCGTGGTaGAAAGGCAGAGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCCDVPW*KGRGRS
Trigger: GCTCCGGCCTCTGCCTTTGCACCACGGGACATCACA...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGTGTGGGAACAAGAGTaGCAGGGGCCCATAAATAGC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAVWEQE*QGPINS
Trigger: GCTATTTATGGGCCCCTGGCACTCTTGTTCCCACAC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGTGTGGGAACAAGAGTaGCAGGGGCCCATAAATAGC +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHVWEQE*QGPINS
Trigger: GCTATTTATGGGCCCCTGGCACTCTTGTTCCCACAC...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCTGGAAACCGTCTCCCTaGCTGGGACACACAGCAATT +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPWKPSP*LGHTAI
Trigger: AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCA...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCGTCATCTCCCGAGGATaGAGCGTCTGTCACCCGCAC +
Preference number: 4 (lower is better)
Translates to: TSGVLELMDALDSRDTCRVISRG*SVCHPH
Trigger: GTGCGGGTGACAGACGCTCCATCCTCGGGAGATGAC...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTGTCATCTCCCGAGGATaGAGCGTCTGTCACCCGCAC +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCVISRG*SVCHPH
Trigger: GTGCGGGTGACAGACGCTCCATCCTCGGGAGATGAC...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAGTCATCTCCCGAGGATaGAGCGTCTGTCACCCGCAC +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKVISRG*SVCHPH
Trigger: GTGCGGGTGACAGACGCTCCATCCTCGGGAGATGAC...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGCTCCTCCTCGGCTGGCAGCACCACCAGCCACGCAGAGTGATGAGAAAACCCGTGTGTTGGAGCTCATaGACGCGTTGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLLLGWQHHQPRRVMRKPVCWSS*TRWTPG
Trigger: CCCTGGAGTCCAACGCGTCCATGAGCTCCAACACAC...GGGTTTTCTCATCACTCTGCGTGGCTGGTGGTGCTGCCAGCCGAGGAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCGCACCAGTGGTGTGTTaGAGCTCATGGACGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSAPVVC*SSWTRW
Trigger: CCAACGCGTCCATGAGCTCCAACACACCACTGGTGC...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTGCGATGCGCACCAGTaGTGTGTTGGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVCDAHQ*CVGAHG
Trigger: TCCATGAGCTCCAACACACCACTGGTGCGCATCGCA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGTGCGATGCGCACCAGTaGTGTGTTGGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWCDAHQ*CVGAHG
Trigger: TCCATGAGCTCCAACACACCACTGGTGCGCATCGCA...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCTGCGATGCGCACCAGTaGTGTGTTGGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: STSQETVAQQRGHPGYLCCDAHQ*CVGAHG
Trigger: TCCATGAGCTCCAACACACCACTGGTGCGCATCGCA...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAGAGACAGCTCCCATTTaGGGTCGGCAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKETAPI*GRQAAR
Trigger: TCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTC...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGACAGGTCCTTGTCAGTaGCATCGTCTTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SAGSSSSETLASVGPSPETGPCQ*HRLSAS
Trigger: AGATGCTGAAAGACGATGCCACTGACAAGGACCTGT...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAACAGGTCCTTGTCAGTaGCATCGTCTTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGTGPCQ*HRLSAS
Trigger: AGATGCTGAAAGACGATGCCACTGACAAGGACCTGT...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGCCCGCAGGTTACCCTTaGCCGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLPAGYP*PRTPPA
Trigger: TGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGG...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCCCATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGCTGTGGATGCACTTCTaGGAGGCCAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: APIWGRQAARARRHWPAWLWMHF*EAKYSM
Trigger: CATGGAGTACTTGGCCTCCCAGAAGTGCATCCACAG...CCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCTGTGGATGCACTTCTaGGAGGCCAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPLWMHF*EAKYSM
Trigger: CATGGAGTACTTGGCCTCCCAGAAGTGCATCCACAG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCTGTGGATGCACTTCTaGGAGGCCAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVALWMHF*EAKYSM
Trigger: CATGGAGTACTTGGCCTCCCAGAAGTGCATCCACAG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGACCCCTCACATTGTTaGGGACCAGTGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGDPSHC*GPVALH
Trigger: GTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTC...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCACCAGGCACAAGGTGCTaGACATGTGGGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAAPGTRC*TCGASL
Trigger: CAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGG...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGTGGCCAGCTAAATGCTaGAAGTGTTGGGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRWPAKC*KCWGVG
Trigger: TCCCACACCCCAACACTTCCAGCATTTAGCTGGCCA...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTCTGGACGTACATTCTTaGCCGTCCCTCTATCGGCGG +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGLDVHS*PSLYRR
Trigger: CCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAG...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGGACCACCCTGAGCCATaGCCCTGCAGGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLDHPEP*PCRQAR
Trigger: CCTTGCTTGCCTGCAGGGCCATGGCTCAGGGTGGTC...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
3UTR CAA 72 bp ATGCGCACCAGTGGTGTGTTGGAGCTCATGGACGCGTaGGACTCCAGGGACACCTGTCGCTTGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: MRTSGVLELMDA*DSRDTCRLSGK
Trigger: CTTCCCGCTCAAGCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGCCAGCACTCCCGCATaGTCATGTACAGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAAASTPA*SCTGRV
Trigger: CACACGACCTGTACATGATCATGCGGGAGTGCTGGC...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAACTTCCCTCCAAGCTTTaGAAGGTAGCAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKLPSKL*KVAVQA
Trigger: AGCCTGGACTGCTACCTTTCAAAGCTTGGAGGGAAG...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACACAGAACGAACCAACTaGATTCACGGCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHTERTN*IHGFPP
Trigger: TGGAGGGAAGCCGTGAATTCAGTTGGTTCGTTCTGT...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGACAGAACGAACCAACTaGATTCACGGCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRTERTN*IHGFPP
Trigger: TGGAGGGAAGCCGTGAATTCAGTTGGTTCGTTCTGT...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCTGTACGTCTGCCGGATaGTGCCAAACTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPCTSAG*CQTCSP
Trigger: TGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACA...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTCGTCCGGGCCCACCTTaGTGCCATTCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRRPGPP*CHSPPR
Trigger: ACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACG...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAATGTACAGGTCGTGTGTaGAGTTGGCGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLECTGRV*SWRACP
Trigger: TGGACAAGCCCGCCAACTGCACACACGACCTGTACA...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGCACCCAGGGTACCTCTaGACCTGGAGGCAAGATGCG +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLHPGYL*TWRQDA
Trigger: CGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTG...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTAAGGCCCCTCGGTGCTaGAGCACCAGTCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRKAPRC*STSQET
Trigger: GGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTT...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGGTGTGGGAACAAGAGTaGCAGGGGCCCATAAATAGC +
Preference number: 4 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWVWEQE*QGPINS
Trigger: GCTATTTATGGGCCCCTGGCACTCTTGTTCCCACAC...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTGGAAACCGTCTCCCTaGCTGGGACACACAGCAATT +
Preference number: 4 (lower is better)
Translates to: APAAGWAARDPSHCWGPVWKPSP*LGHTAI
Trigger: AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTTGGAAACCGTCTCCCTaGCTGGGACACACAGCAATT +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIWKPSP*LGHTAI
Trigger: AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCA...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTCCTGAGCCATGGCCCTaGAGGCAAGCAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRPEPWP*RQARDS
Trigger: GCTGTCCCTTGCTTGCCTGCAGGGCCATGGCTCAGG...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGTGTGTTGGAGCTCATaGACGCGTTGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAAVCWSS*TRWTPG
Trigger: CCCTGGAGTCCAACGCGTCCATGAGCTCCAACACAC...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTGCACCAGTGGTGTGTTaGAGCTCATGGACGCGTTGG +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCAPVVC*SSWTRW
Trigger: CCAACGCGTCCATGAGCTCCAACACACCACTGGTGC...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTAGACATTGGCCAGCGTaGGGCCCTCCCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRRHWPA*GPPLRT
Trigger: TGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCT...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGATTGTTGGGGACCAGTaGCCCTTCACGTCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLIVGDQ*PFTSAS
Trigger: GCTCGCGGACGTGAAGGGCCACTGGTCCCCAACAAT...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAAAGGTGCTGGACATGTaGGGCTTCCCTGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKKVLDM*GFPAGS
Trigger: TGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTT...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAAAGGTGCTGGACATGTaGGGCTTCCCTGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAAKVLDM*GFPAGS
Trigger: TGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTT...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTGGGAAAGCCTGGAGGTaGGGAGGCGGTGCCACTAAC +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRGKAWR*GGGATN
Trigger: GTTAGTGGCACCGCCTCCCCACCTCCAGGCTTTCCC...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCAAACTCTCCGCCATGTaGCCAGCTAAATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAKLSAM*PAKCWK
Trigger: CTTCCAGCATTTAGCTGGCCACATGGCGGAGAGTTT...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACAAACTCTCCGCCATGTaGCCAGCTAAATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHKLSAM*PAKCWK
Trigger: CTTCCAGCATTTAGCTGGCCACATGGCGGAGAGTTT...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGAGCTCCGGGGCAGGCTaGACGTACATTCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLSSGAG*TYILGR
Trigger: ACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAGCT...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCACGGCGTCCTCAAAGGTaGCGTTGTGCAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAARRPQR*RCARRE
Trigger: TTCTCTCCTTGCACAACGTCACCTTTGAGGACGCCG...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTCTTCCCTCCAAGCTTTaGAAGGTAGCAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGLPSKL*KVAVQA
Trigger: AGCCTGGACTGCTACCTTTCAAAGCTTGGAGGGAAG...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCTCAAAGGTGACGTTGTaGAAGGAGAGAACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVASKVTL*KERTSS
Trigger: GCTAGAGGTTCTCTCCTTGCACAACGTCACCTTTGA...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412135.7
ENST00000440486.8
CDS-3UTR GCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLRTALR*APVVCW
Trigger: CCAACACACCACTGGTGCGCATCGCAAGGCTGTCCT...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGAATAACATCGGAACCTaGACACAGGGCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLNNIGT*TQGRPL
Trigger: GAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATT...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCATGCGATGCGCACCAGTaGTGTGTTGGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAACDAHQ*CVGAHG
Trigger: TCCATGAGCTCCAACACACCACTGGTGCGCATCGCA...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCACAGGTCCTTGTCAGTaGCATCGTCTTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: PAAGWAARDPSHCWGPVATGPCQ*HRLSAS
Trigger: AGATGCTGAAAGACGATGCCACTGACAAGGACCTGT...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp AGCTTTGGGTGTGGGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAAAACTCTCCGCCATGTaGCCAGCTAAATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFGCGRGRGPPCDVPWCKKLSAM*PAKCWK
Trigger: CTTCCAGCATTTAGCTGGCCACATGGCGGAGAGTTT...TTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CAGGATGAACAGGAAGAAGCCCACCCCGTAGCTGAGGATGCCTGCATACACACTAGCCCACCCCGTAGCTaGGGATGCCTGCATACACAC +
Preference number: 4 (lower is better)
Translates to: QDEQEEAHPVAEDACIHTSPPRS*GCLHTH
Trigger: GTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCT...AGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTCATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTTGTACGTCTGCCGGATaGTGCCAAACTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGCTSAG*CQTCSP
Trigger: TGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACA...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGATCAAAGGTGACGTTGTaGAAGGAGAGAACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARSKVTL*KERTSS
Trigger: GCTAGAGGTTCTCTCCTTGCACAACGTCACCTTTGA...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGTACAGGTCGTGTGTaGAGTTGGCGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLCTGRV*SWRACP
Trigger: TGGACAAGCCCGCCAACTGCACACACGACCTGTACA...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTCATGTGGGGCTTCCCTaGAGGCTCAGCTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRHVGLP*RLSFGC
Trigger: ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATG...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCGATGCGCACCAGTaGTGTGTTGGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: ALCSCLSICTESHAGEWLCDAHQ*CVGAHG
Trigger: TCCATGAGCTCCAACACACCACTGGTGCGCATCGCA...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAACAGGTCCTTGTCAGTaGCATCGTCTTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQTGPCQ*HRLSAS
Trigger: AGATGCTGAAAGACGATGCCACTGACAAGGACCTGT...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTACAGGTCCTTGTCAGTaGCATCGTCTTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAITGPCQ*HRLSAS
Trigger: AGATGCTGAAAGACGATGCCACTGACAAGGACCTGT...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACTGTGGATGCACTTCTaGGAGGCCAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKLWMHF*EAKYSM
Trigger: CATGGAGTACTTGGCCTCCCAGAAGTGCATCCACAG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTCTGTGGATGCACTTCTaGGAGGCCAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCLWMHF*EAKYSM
Trigger: CATGGAGTACTTGGCCTCCCAGAAGTGCATCCACAG...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp GGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAAAAACTCTCCGCCATGTaGCCAGCTAAATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GRPLPGNRLPAWDTQQLEKLSAM*PAKCWK
Trigger: CTTCCAGCATTTAGCTGGCCACATGGCGGAGAGTTT...TTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTAGCTCATGGACGCGTTaGACTCCAGGGACACCTGCT +
Preference number: 4 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRSSWTR*TPGTPA
Trigger: AGCAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCT...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS-3UTR CCA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCCCAAAGGACCAGGTTaGTCGTCTTCTTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPPKGPG*SSSCSS
Trigger: ACTACTACAAGAAGACGACCAACCTGGTCCTTTGGG...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS-3UTR GCA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCATGTACGTCTGCCGGATaGTGCCAAACTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VSPSALSLMPGSGCAPAACTSAG*CQTCSP
Trigger: TGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACA...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCGCACCGCCGTCTGGTTaGCCGGCAGCCCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACAPPSG*PAAPPA
Trigger: TGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGC...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCCTCCCCAAGGGGCTTaGCCAGGGTCAGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASPPQGA*PGSAGP
Trigger: GGGCCCGGCTGACCCTGGGCAAGCCCCTTGGGGAGG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCTGCTGGCCGGGCTCTaGGCCCGGGACTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASLLAGL*ARDFCR
Trigger: GCGGCAGAAGTCCCGGGCCCAGAGCCCGGCCAGCAG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCGCACCGCCGTCTGGTTaGCCGGCAGCCCCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASAPPSG*PAAPPA
Trigger: TGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGC...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CAGGATGAACAGGAAGAAGCCCACCCCGTAGCTGAGGATGCCTGCATACACACTTGCGATGCGCACCAGTaGTGTGTTGGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: QDEQEEAHPVAEDACIHTCDAHQ*CVGAHG
Trigger: TCCATGAGCTCCAACACACCACTGGTGCGCATCGCA...AGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR TCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCCGATGGCCTCCGCCATaGCCACCTGGCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACRWPPP*PPGRSS
Trigger: GCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCG...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCCATGCCTGCCTCCTGTaGCCCCAGGGTCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACHACLL*PQGRRP
Trigger: AGGCCTGCGACCCTGGGGGCACAGGAGGCAGGCATG...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTCCCCGCCCAGGGCCATaGCTGCCTCCTGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCPRPGP*LPPVPP
Trigger: TGGGGGCACAGGAGGCAGGCATGGCCCTGGGCGGGG...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTAGGCGCCGGCCACGATaGCCACGGCCACGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCRRRPR*PRPRRA
Trigger: CGCTCTGCGTGGCCGTGGCCATCGTGGCCGGCGCCT...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCGCTCAGCTTTGGGTGTaGGAGGGGCCGAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACAQLWV*EGPRPT
Trigger: GGTGGGCCTCGGCCCCTCCCACACCCAAAGCTGAGC...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTCGTGGGGCCCTCCCCTaGGGACAGCCTTGCGATGCG +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCRGALP*GQPCDA
Trigger: CGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACG...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCTGGAGGGAGTGGGGTTaGCAGCGGCTGGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASWREWG*QRLGSG
Trigger: TCCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCA...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CAGGATGAACAGGAAGAAGCCCACCCCGTAGCTGAGGATGCCTGCATACACACTTGTACGTCTGCCGGATaGTGCCAAACTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QDEQEEAHPVAEDACIHTCTSAG*CQTCSP
Trigger: TGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACA...AGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCATGCCTGCCTCCTGTaGCCCCAGGGTCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASHACLL*PQGRRP
Trigger: AGGCCTGCGACCCTGGGGGCACAGGAGGCAGGCATG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGGGGTTGCCAGCGGCTaGGCAGCGGAAGCGGACGGT +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCGVASG*AAEADG
Trigger: ACCGTCCGCTTCCGCTGCCCAGCCGCTGGCAACCCC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGGGCCGGCCCCTCCCTaGAAACCGTCTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCGPAPP*KPSPCL
Trigger: CAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTCACGGAGTCGTCCCCTaGGGAGCTGGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCHGVVP*GAGAGG
Trigger: ACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTG...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCCGAGGCCCACCCTGTaGTGTCCCGTGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASPRPTL*CPVVQR
Trigger: CCTTTGCACCACGGGACATCACAGGGTGGGCCTCGG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCCAGTCAGGAGACCGTTaGACAGCAGCGGGGACACCC +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACQSGDR*TAAGTP
Trigger: GGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTG...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCCCCTGGTCCTCTGCTTaGATGGGTGAGACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACPWSSA*MGETPW
Trigger: CCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGG...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCCCTGAGCCATGGCCCTaGAGGCAAGCAAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACPEPWP*RQARDS
Trigger: GCTGTCCCTTGCTTGCCTGCAGGGCCATGGCTCAGG...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGCTCAGCTTTGGGTGTaGGAGGGGCCGAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCAQLWV*EGPRPT
Trigger: GGTGGGCCTCGGCCCCTCCCACACCCAAAGCTGAGC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCCTGTCACCCGCACACTaGAGTGGCACAGTACGCGCT +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACLSPAH*SGTVRA
Trigger: AGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAG...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCAAGAAGAGACCACCCTaGGCCATGGCCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACKKRPP*AMALQA
Trigger: TGCCTGCAGGGCCATGGCTCAGGGTGGTCTCTTCTT...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCATGCCTCCAATGCGGTaGTCGCCGCGGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASMPPMR*SPRNSL
Trigger: CAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCAT...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCTCCTTGAAGGTGAGCTaGTCCTCGGGCGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACSLKVS*SSGGLQ
Trigger: CTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGA...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTCCACCCGGGGAGTACTaGTCGAAAGGCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCPPGEY*SKGADR
Trigger: CCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGG...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCGAGACAGCTCCCATTTaGGGTCGGCAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACETAPI*GRQAAR
Trigger: TCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTC...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGGGGGCAGCAGGTCGTaGGCAAACACGGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCGGSRS*ANTESS
Trigger: GGACGACTCCGTGTTTGCCCACGACCTGCTGCCCCC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCAGCTCCGGGGCAGGCTaGACGTACATTCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACSSGAG*TYILGR
Trigger: ACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAGCT...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCAGCCCACCCCGTAGCTaGGGATGCCTGCATACACAC +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASSPPRS*GCLHTH
Trigger: GTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCT...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCGCTCCTCGGGCGGCTTaGAGGTGTCGAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASAPRAA*RCRRSS
Trigger: ACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGC...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCACCTGGAGGCAAGATaGGCACGCACACAGGCACAC +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASHLEAR*ARTQAH
Trigger: GTGTGCCTGTGTGCGTGCGCATCTTGCCTCCAGGTG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCGTGTGTTGGAGCTCATaGACGCGTTGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACVCWSS*TRWTPG
Trigger: CCCTGGAGTCCAACGCGTCCATGAGCTCCAACACAC...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCCGGGCAGCCGGCCGTTaGTCGTCTTCTTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACRAAGR*SSSCSS
Trigger: ACTACTACAAGAAGACGACCAACGGCCGGCTGCCCG...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCGACCCCTCACATTGTTaGGGACCAGTGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACDPSHC*GPVALH
Trigger: GTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTC...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCAGGACAGCCTTGCGATaGGCACCAGTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASRTALR*APVVCW
Trigger: CCAACACACCACTGGTGCGCATCGCAAGGCTGTCCT...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCAATAACATCGGAACCTaGACACAGGGCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASNNIGT*TQGRPL
Trigger: GAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATT...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCAGCTCATGGACGCGTTaGACTCCAGGGACACCTGTC +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASSSWTR*TPGTPV
Trigger: GACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCT...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGAGACAGCTCCCATTTaGGGTCGGCAGGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCETAPI*GRQAAR
Trigger: TCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGTGTGTTGGAGCTCATaGACGCGTTGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCVCWSS*TRWTPG
Trigger: CCCTGGAGTCCAACGCGTCCATGAGCTCCAACACAC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGGAAGTGTTGGGGTGTaGGAACAAGAGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCGSVGV*EQECQG
Trigger: CCCCTGGCACTCTTGTTCCCACACCCCAACACTTCC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCTGGCCAGCTAAATGCTaGAAGTGTTGGGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACWPAKC*KCWGVG
Trigger: TCCCACACCCCAACACTTCCAGCATTTAGCTGGCCA...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCTGGCCAGCTAAATGCTaGAAGTGTTGGGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASWPAKC*KCWGVG
Trigger: TCCCACACCCCAACACTTCCAGCATTTAGCTGGCCA...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTCTTCCCTCCAAGCTTTaGAAGGTAGCAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCLPSKL*KVAVQA
Trigger: AGCCTGGACTGCTACCTTTCAAAGCTTGGAGGGAAG...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCTGTACGTCTGCCGGATaGTGCCAAACTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASCTSAG*CQTCSP
Trigger: TGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACA...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CCA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCACAGGTCCTTGTCAGTaGCATCGTCTTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: PCLGHTAIRRICMKIPACTGPCQ*HRLSAS
Trigger: AGATGCTGAAAGACGATGCCACTGACAAGGACCTGT...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR TCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTACAGAACGAACCAACTaGATTCACGGCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCTERTN*IHGFPP
Trigger: TGGAGGGAAGCCGTGAATTCAGTTGGTTCGTTCTGT...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR GCA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTTCAAAGGTGACGTTGTaGAAGGAGAGAACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCSKVTL*KERTSS
Trigger: GCTAGAGGTTCTCTCCTTGCACAACGTCACCTTTGA...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS GCA 90 bp GGGCGTGCAGGGCGCGCGGCCAGGGCCTTGGAGCTGGAGCTCTTGTaGCGGCCGGCATGGGACAGAGTCGTTACCTGCTCGGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GRAGRAARALELELL*RPAWDRVVTCSGPV
Trigger: CACGGGCCCCGAGCAGGTAACGACTCTGTCCCATGCCGGCCGGCACAAGAGCTCCAGCTCCAAGGCCCTGGCCGCGCGCCCTGCACGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS-3UTR CAA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGACGGAAGCGGACGGTGTaGGCGGCCGGCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGRKRTV*AAGTAS
Trigger: GCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCCG...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGGAAGCGGACGGTGTaGGCGGCCGGCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PAAGWAARDPSHCWGPVARKRTV*AAGTAS
Trigger: GCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCCG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp GAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGATGGAGGGAGTGGGGTaGCCAGCGGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: ELLLGRLAGVEGVVQARGMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCAT...CCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGCGGAAGCGGACGGTGTaGGCGGCCGGCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: APAAGWAARDPSHCWGPVRKRTV*AAGTAS
Trigger: GCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCCG...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCCGGAAGCGGACGGTGTaGGCGGCCGGCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGRKRTV*AAGTAS
Trigger: GCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCCG...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGGGGAAGCGGGAGATCTaGTGCACGGTGGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SAGSSSSETLASVGPSPEGKREI*CTVGEP
Trigger: GGGCTCCCCCACCGTGCACAAGATCTCCCGCTTCCC...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGGGAAGCGGGAGATCTaGTGCACGGTGGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGGKREI*CTVGEP
Trigger: GGGCTCCCCCACCGTGCACAAGATCTCCCGCTTCCC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCATGGAGGGAGTGGGGTaGCCAGCGGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCAT...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCCCCCTGAGGACAGCCTaGCGATGCGCACCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: RPWSSACMGETPWGLPPRPLRTA*RCAPVV
Trigger: CACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGG...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGTTGGCGGCCCGGTCCTaGTCAATGCCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SAGSSSSETLASVGPSPELAARS*SMPMAS
Trigger: GGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAA...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCTTGGCGGCCCGGTCCTaGTCAATGCCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RPWSSACMGETPWGLPPRLAARS*SMPMAS
Trigger: GGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAA...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCTACGGTGACAGGCTaGGCGGCCCGGTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGATVTG*AARSLS
Trigger: TGACAAGGACCGGGCCGCCAAGCCTGTCACCGTAGC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCCGGAAGCGGACGGTGTaGGCGGCCGGCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TSGVLELMDALDSRDTCRRKRTV*AAGTAS
Trigger: GCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCCG...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAATGGAGGGAGTGGGGTaGCCAGCGGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCAT...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTATGGAGGGAGTGGGGTaGCCAGCGGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCAT...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CGCCGACAGGTCCAGGTACTCGTCGGTGGACGTCACGGTAAGGACACGGTCCAGTCCCGCTCCGACACATaGGCCAGGCGGAGGCGCACG +
Preference number: 5 (lower is better)
Translates to: RRQVQVLVGGRHGKDTVQSRSDT*ARRRRT
Trigger: CGTGCGCCTCCGCCTGGCCAATGTGTCGGAGCGGGA...CTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGATCCCGCTCCGACACATaGGCCAGGCGGAGGCGCACG +
Preference number: 5 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARSRSDT*ARRRRT
Trigger: CGTGCGCCTCCGCCTGGCCAATGTGTCGGAGCGGGA...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340107.8
CDS-3UTR CAA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGGGAAGCGGGAGATCTaGTGCACGGTGGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHGKREI*CTVGEP
Trigger: GGGCTCCCCCACCGTGCACAAGATCTCCCGCTTCCC...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGTCGAGCTCGGAGACATaGGCCAGCGTGGGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRSSSET*ASVGPS
Trigger: GGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGA...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TGGGGGTGTCCTGGCCACCCGGGGAGTACTGCTCGAAAGGCGCCGACAGGTCCAGCTACGGTGACAGGCTaGGCGGCCCGGTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: WGCPGHPGSTARKAPTGPATVTG*AARSLS
Trigger: TGACAAGGACCGGGCCGCCAAGCCTGTCACCGTAGC...TGGACCTGTCGGCGCCTTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp GAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGAGGTCGTGTGTGCAGTaGGCGGGCTTGTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: ELLLGRLAGVEGVVQARGRSCVQ*AGLSMR
Trigger: CCGCATGGACAAGCCCGCCAACTGCACACACGACCT...CCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAAGGTCGTGTGTGCAGTaGGCGGGCTTGTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGRSCVQ*AGLSMR
Trigger: CCGCATGGACAAGCCCGCCAACTGCACACACGACCT...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS CCA 90 bp TGTGCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTaGGGACCAGTGGCCCTTCACGTCCGCGAGCCCCCACTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: CAPAAGWAARDPSHC*GPVALHVREPPLLG
Trigger: ACCCAGCAGTGGGGGCTCGCGGACGTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGAGCTCATGGACGCGTaGGACTCCAGGGACACCTGT +
Preference number: 5 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGELMDA*DSRDTC
Trigger: ACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp AGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACGCCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTG +
Preference number: 5 (lower is better)
Translates to: RPWSSACMGETPWGLPPRRTSGV*ELMDAL
Trigger: CAACGCGTCCATGAGCTCCAACACACCACTGGTGCG...GCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCCCCTGAGGACAGCCTaGCGATGCGCACCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPPLRTA*RCAPVV
Trigger: CACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTCGAGCTCGGAGACATaGGCCAGCGTGGGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: APAAGWAARDPSHCWGPVSSSET*ASVGPS
Trigger: GGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGTCGAGCTCGGAGACATaGGCCAGCGTGGGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWSSSET*ASVGPS
Trigger: GGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGA...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTTCGAGCTCGGAGACATaGGCCAGCGTGGGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPSSSET*ASVGPS
Trigger: GGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGA...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGAGACAGCTCCCATTaGGGGTCGGCAGGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PAAGWAARDPSHCWGPVARDSSH*GSAGSS
Trigger: CGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCATTGGCGGCCCGGTCCTaGTCAATGCCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPLAARS*SMPMAS
Trigger: GGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAA...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCTTGGCGGCCCGGTCCTaGTCAATGCCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPLAARS*SMPMAS
Trigger: GGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAA...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCGCTACGGTGACAGGCTaGGCGGCCCGGTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: PAAGWAARDPSHCWGPVAATVTG*AARSLS
Trigger: TGACAAGGACCGGGCCGCCAAGCCTGTCACCGTAGC...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS GCA 90 bp GAGCTGGAGCTCTTGTGCCGGCCGGCATGGGACAGAGTCGTTACCTaGTCGGGGCCCGTGAACGCTCAGCCAAAAGGCCTTCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: ELELLCRPAWDRVVT*SGPVNAQPKGLLGH
Trigger: GTGGCCGAGAAGGCCTTTTGGCTGAGCGTTCACGGGCCCCGAGCAGGTAACGACTCTGTCCCATGCCGGCCGGCACAAGAGCTCCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS-3UTR CAA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCC +
Preference number: 5 (lower is better)
Translates to: SAGSSSSETLASVGPSPERTSSS*SVVLAP
Trigger: GGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCT...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACAGGGACACCTGTCGCTaGAGCGGGAAGCGGGAGATC +
Preference number: 5 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHRDTCR*SGKREI
Trigger: GATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCCT...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCCCCCTGAGGACAGCCTaGCGATGCGCACCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: STSQETVAQQRGHPGYLCPLRTA*RCAPVV
Trigger: CACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGG...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCGAGACAGCTCCCATTaGGGGTCGGCAGGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWRDSSH*GSAGSS
Trigger: CGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp AGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCTTGGCGGCCCGGTCCTaGTCAATGCCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: STSQETVAQQRGHPGYLCLAARS*SMPMAS
Trigger: GGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAA...GCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp GACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAGAGCTACGGTGACAGGCTaGGCGGCCCGGTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: DRCTAAGTPRVPLHLEARATVTG*AARSLS
Trigger: TGACAAGGACCGGGCCGCCAAGCCTGTCACCGTAGC...TCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCAGGTCGTGTGTGCAGTaGGCGGGCTTGTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPRSCVQ*AGLSMR
Trigger: CCGCATGGACAAGCCCGCCAACTGCACACACGACCT...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGGTCGCAGGCCTCCGTaGTACCAGCCTTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGGRRPP*YQPFPL
Trigger: AAGAGGAAAAGGCTGGTACAACGGAGGCCTGCGACC...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGGACACCTGCTGTCGCTaGAGCGGGAAGCGGGAGATC +
Preference number: 5 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRDTCCR*SGKREI
Trigger: GATCTCCCGCTTCCCGCTCAAGCGACAGCAGGTGTC...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS CCA 90 bp GGCCCTCCCCTGAGGACAGCCTTGCGATGCGCACCAGTGGTGTGTTaGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: GPPLRTALRCAPVVC*SSWTRWTPGTPAVA
Trigger: AGCGACAGCAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS-3UTR CAA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGATGGAGGGAGTGGGGTaGCCAGCGGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: ALCSCLSICTESHAGEWLMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCAT...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp GAGCTGCTCCTCGGGCGGCTTGCAGGTGTCGAAGGAGTAGTCCAGGCCCGGGGGGCCACGCCTATGAAATaGGTGGCTCGACAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: ELLLGRLAGVEGVVQARGATPMK*VARQRY
Trigger: GTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGC...CCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGGAGCTCATGGACGCGTaGGACTCCAGGGACACCTGT +
Preference number: 5 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRELMDA*DSRDTC
Trigger: ACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTC...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp GCTCCCATTTGGGGTCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTG +
Preference number: 5 (lower is better)
Translates to: APIWGRQAARARRHWPAWRTSGV*ELMDAL
Trigger: CAACGCGTCCATGAGCTCCAACACACCACTGGTGCG...CCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp CCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTG +
Preference number: 5 (lower is better)
Translates to: PAAGWAARDPSHCWGPVARTSGV*ELMDAL
Trigger: CAACGCGTCCATGAGCTCCAACACACCACTGGTGCG...GGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp AAAGGCCCTGGTCCTCTGCTTGCATGGGTGAGACCCCCTGGGGCCTCCCTCCACCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTG +
Preference number: 5 (lower is better)
Translates to: KGPGPLLAWVRPPGASLHRTSGV*ELMDAL
Trigger: CAACGCGTCCATGAGCTCCAACACACCACTGGTGCG...GTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAGAGGACCAGGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGCTCCTCCTCGGCTGGCAGCACCACCAGCCACGCAGAGTGATGAGAAAACCCCCCCTGAGGACAGCCTaGCGATGCGCACCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: QLLLGWQHHQPRRVMRKPPLRTA*RCAPVV
Trigger: CACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGG...GGGTTTTCTCATCACTCTGCGTGGCTGGTGGTGCTGCCAGCCGAGGAGGAGCTG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCTCGAGCTCGGAGACATaGGCCAGCGTGGGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: TSGVLELMDALDSRDTCRSSSET*ASVGPS
Trigger: GGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGA...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp CAGCTCCTCCTCGGCTGGCAGCACCACCAGCCACGCAGAGTGATGAGAAAACCCCGAGACAGCTCCCATTaGGGGTCGGCAGGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: QLLLGWQHHQPRRVMRKPRDSSH*GSAGSS
Trigger: CGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCG...GGGTTTTCTCATCACTCTGCGTGGCTGGTGGTGCTGCCAGCCGAGGAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp GGAGGGGCCGAGGCCCACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAAGGTCCGACAGGTCCTaGTCAGTGGCATCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: GGAEAHPVMSRGAKAEAGRSDRS*SVASSF
Trigger: GAAAGACGATGCCACTGACAAGGACCTGTCGGACCT...TCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CTGCAGCACCAGTCAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTAGGTCGTGTGTGCAGTaGGCGGGCTTGTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: LQHQSGDRCTAAGTPRVPRSCVQ*AGLSMR
Trigger: CCGCATGGACAAGCCCGCCAACTGCACACACGACCT...AGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp ATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCAGGGTGGGCAGGTCGTGTGTGCAGTaGGCGGGCTTGTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: ICTESHAGEWLCTSSRVGRSCVQ*AGLSMR
Trigger: CCGCATGGACAAGCCCGCCAACTGCACACACGACCT...GCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGGCTGGACGTACATTCTaGGCCGTCCCTCTATCGGCG +
Preference number: 5 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRAGRTF*AVPLSA
Trigger: CGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGC...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAGCTGGACGTACATTCTaGGCCGTCCCTCTATCGGCG +
Preference number: 5 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPAGRTF*AVPLSA
Trigger: CGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGC...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS CCA 90 bp CGAGGTGGGGCTCCAGGAGGCCTGGCGGGCAGGCAGCTCAGAACCTaGTATCTACTTTCTGTTACCTGTCGCTTGAGCGGGAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: RGGAPGGLAGRQLRT*YLLSVTCRLSGKRE
Trigger: CTCCCGCTTCCCGCTCAAGCGACAGGTAACAGAAAGTAGATACCAGGTTCTGAGCTGCCTGCCCGCCAGGCCTCCTGGAGCCCCACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469068.1
CDS-3UTR CAA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCCGGATGCTGCCAAACTaGTTCTCCACGACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPRMLPN*FSTTQV
Trigger: CACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCG...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp CACCCTGTGATGTCCCGTGGTGCAAAGGCAGAGGCCGGAGCCATGTCGGGCCCAAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCC +
Preference number: 5 (lower is better)
Translates to: HPVMSRGAKAEAGAMSGPRTSSS*SVVLAP
Trigger: GGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCT...TGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACATCACAGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGGGGAAGCGGGAGATCTaGTGCACGGTGGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: ALCSCLSICTESHAGEWLGKREI*CTVGEP
Trigger: GGGCTCCCCCACCGTGCACAAGATCTCCCGCTTCCC...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACCCCTGAGGACAGCCTaGCGATGCGCACCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKPLRTA*RCAPVV
Trigger: CACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp GTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTGCACCAGCAGCACGAGACAGCTCCCATTaGGGGTCGGCAGGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: VSPSALSLMPGSGCAPAARDSSH*GSAGSS
Trigger: CGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCG...TGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTCGAGACAGCTCCCATTaGGGGTCGGCAGGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCRDSSH*GSAGSS
Trigger: CGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCG...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAATTGGCGGCCCGGTCCTaGTCAATGCCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKLAARS*SMPMAS
Trigger: GGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAA...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGGGTCGCAGGCCTCCGTaGTACCAGCCTTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRGRRPP*YQPFPL
Trigger: AAGAGGAAAAGGCTGGTACAACGGAGGCCTGCGACC...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGGAGCTCATGGACGCGTaGGACTCCAGGGACACCTTG +
Preference number: 5 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWELMDA*DSRDTL
Trigger: CAAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTC...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352904.6
CDS-3UTR CAA 90 bp CCAGAACAAAGGCCCCTCGGTGCTGCAGCACCAGTCAGGAGACCGTTGCACAGCGAGCTCATGGACGCGTaGGACTCCAGGGACACCTGC +
Preference number: 5 (lower is better)
Translates to: PEQRPLGAAAPVRRPLHSELMDA*DSRDTC
Trigger: GCAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTC...GCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS TCA 90 bp TGTGCCGGCCGGCATGGGACAGAGTCGTTACCTGCTCGGGGCCCGTaGACGCTCAGCCAAAAGGCCTTCTCGGCCACGCCTATGAAATTG +
Preference number: 5 (lower is better)
Translates to: CAGRHGTESLPARGP*TLSQKAFSATPMKL
Trigger: CAATTTCATAGGCGTGGCCGAGAAGGCCTTTTGGCTGAGCGTTCACGGGCCCCGAGCAGGTAACGACTCTGTCCCATGCCGGCCGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS-3UTR CAA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTCGGATGCTGCCAAACTaGTTCTCCACGACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIRMLPN*FSTTQV
Trigger: CACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCG...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCGGATGCTGCCAAACTaGTTCTCCACGACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWRMLPN*FSTTQV
Trigger: CACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCG...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCC +
Preference number: 5 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQRTSSS*SVVLAP
Trigger: GGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCT...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp ACAGGGCCGGCCCCTCCCTGGAAACCGTCTCCCTGCCTGGGACACACAGCAATTAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCC +
Preference number: 5 (lower is better)
Translates to: TGPAPPWKPSPCLGHTAIRTSSS*SVVLAP
Trigger: GGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCT...AATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TCGGCAGGCAGCTCGAGCTCGGAGACATTGGCCAGCGTGGGGCCCTCCCCTGAGTCCTCAAAGGTGACGTaGTGCAAGGAGAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: SAGSSSSETLASVGPSPESSKVT*CKERTS
Trigger: AGAGGTTCTCTCCTTGCACAACGTCACCTTTGAGGA...CTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp CAGCTCCTCCTCGGCTGGCAGCACCACCAGCCACGCAGAGTGATGAGAAAACCCGAGCTCATGGACGCGTaGGACTCCAGGGACACCTGT +
Preference number: 5 (lower is better)
Translates to: QLLLGWQHHQPRRVMRKPELMDA*DSRDTC
Trigger: ACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTC...GGGTTTTCTCATCACTCTGCGTGGCTGGTGGTGCTGCCAGCCGAGGAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGGCTACGGTGACAGGCTaGGCGGCCCGGTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: ALCSCLSICTESHAGEWLATVTG*AARSLS
Trigger: TGACAAGGACCGGGCCGCCAAGCCTGTCACCGTAGC...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGCTCCTCCTCGGCTGGCAGCACCACCAGCCACGCAGAGTGATGAGAAAACCCCGGATGCTGCCAAACTaGTTCTCCACGACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QLLLGWQHHQPRRVMRKPRMLPN*FSTTQV
Trigger: CACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCG...GGGTTTTCTCATCACTCTGCGTGGCTGGTGGTGCTGCCAGCCGAGGAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTG +
Preference number: 5 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCRTSGV*ELMDAL
Trigger: CAACGCGTCCATGAGCTCCAACACACCACTGGTGCG...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGAGGTCCGACAGGTCCTaGTCAGTGGCATCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: HQQQGGLLGTPHIVGDQWRSDRS*SVASSF
Trigger: GAAAGACGATGCCACTGACAAGGACCTGTCGGACCT...CCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp GAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGCAAAGGTCCGACAGGTCCTaGTCAGTGGCATCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: ETVAQQRGHPGYLCTWRQRSDRS*SVASSF
Trigger: GAAAGACGATGCCACTGACAAGGACCTGTCGGACCT...TTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTGTGCTGGACGTACATTCTaGGCCGTCCCTCTATCGGCG +
Preference number: 5 (lower is better)
Translates to: QAQGAGHVGLPCRLSFGCAGRTF*AVPLSA
Trigger: CGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGC...ACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGGAGACCGTTGCACAGCAGCGGGGACACCCAGGGTACCTCTGCACCTGGAGGAACAACCTTTTAGGCTaGGAGGGGATCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QETVAQQRGHPGYLCTWRNNLLG*EGILQL
Trigger: GAGCTGGAGGATCCCCTCCAAGCCTAAAAGGTTGTT...CCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAACGGATGCTGCCAAACTaGTTCTCCACGACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKRMLPN*FSTTQV
Trigger: CACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCG...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGGCCCTCCTCAAAGGTGACGTaGTGCAAGGAGAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: QQQGGLLGTPHIVGDQWPSSKVT*CKERTS
Trigger: AGAGGTTCTCTCCTTGCACAACGTCACCTTTGAGGA...GGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp CCCAGGCACAAGGTGCTGGACATGTGGGGCTTCCCTGCAGGCTCAGCTTTGGGTAGGTCCGACAGGTCCTaGTCAGTGGCATCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: PRHKVLDMWGFPAGSALGRSDRS*SVASSF
Trigger: GAAAGACGATGCCACTGACAAGGACCTGTCGGACCT...ACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAGCCACGCCTATGAAATaGGTGGCTCGACAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKATPMK*VARQRY
Trigger: GTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGC...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340107.8
CDS-3UTR CAA 90 bp GCACCAGCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTGGGGACCAGTGTCCTCAAAGGTGACGTaGTGCAAGGAGAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: APAAGWAARDPSHCWGPVSSKVT*CKERTS
Trigger: AGAGGTTCTCTCCTTGCACAACGTCACCTTTGAGGA...CACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp ACATCTAATAACATCGGAACCTGCACACAGGGCCGGCCCCTCCCTGGAAACCGTGAGCTCATGGACGCGTaGGACTCCAGGGACACCTGT +
Preference number: 5 (lower is better)
Translates to: TSNNIGTCTQGRPLPGNRELMDA*DSRDTC
Trigger: ACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTC...ACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp ACCAGTGGTGTGTTGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGTCGCAGGTCCGACAGGTCCTaGTCAGTGGCATCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: TSGVLELMDALDSRDTCRRSDRS*SVASSF
Trigger: GAAAGACGATGCCACTGACAAGGACCTGTCGGACCT...GCGACAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS-3UTR CAA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAAGGTCCGACAGGTCCTaGTCAGTGGCATCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKRSDRS*SVASSF
Trigger: GAAAGACGATGCCACTGACAAGGACCTGTCGGACCT...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CTCCGGGGCAGGCTGGACGTACATTCTTGGCCGTCCCTCTATCGGCGGGATAAAAACAACCTTTTAGGCTaGGAGGGGATCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LRGRLDVHSWPSLYRRDKNNLLG*EGILQL
Trigger: GAGCTGGAGGATCCCCTCCAAGCCTAAAAGGTTGTT...TTTATCCCGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp GCTCTGTGTAGCTGTCTCTCCATCTGCACTGAGTCTCATGCCGGGGAGTGGCTGTCCTCAAAGGTGACGTaGTGCAAGGAGAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: ALCSCLSICTESHAGEWLSSKVT*CKERTS
Trigger: AGAGGTTCTCTCCTTGCACAACGTCACCTTTGAGGA...CAGCCACTCCCCGGCATGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCCCCCTGAGGACAGCCTaGCGATGCGCACCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: PCLGHTAIRRICMKIPACPLRTA*RCAPVV
Trigger: CACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGG...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGGGAAGCGGGAGATCTaGTGCACGGTGGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCGKREI*CTVGEP
Trigger: GGGCTCCCCCACCGTGCACAAGATCTCCCGCTTCCC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp CCCTGCCTGGGACACACAGCAATTAGAAGAATTTGTATGAAAATACCAGCTTGCAGGGACACCTGTCGCTaGAGCGGGAAGCGGGAGATC +
Preference number: 5 (lower is better)
Translates to: PCLGHTAIRRICMKIPACRDTCR*SGKREI
Trigger: GATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCCT...GCAAGCTGGTATTTTCATACAAATTCTTCTAATTGCTGTGTGTCCCAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCGCTACGGTGACAGGCTaGGCGGCCCGGTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASATVTG*AARSLS
Trigger: TGACAAGGACCGGGCCGCCAAGCCTGTCACCGTAGC...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTAGGGACACCTGTCGCTaGAGCGGGAAGCGGGAGATC +
Preference number: 5 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCRDTCR*SGKREI
Trigger: GATCTCCCGCTTCCCGCTCAAGCGACAGGTGTCCCT...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
CDS-3UTR CAA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTG +
Preference number: 5 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASRTSGV*ELMDAL
Trigger: CAACGCGTCCATGAGCTCCAACACACCACTGGTGCG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTAGGTCGTGTGTGCAGTaGGCGGGCTTGTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCRSCVQ*AGLSMR
Trigger: CCGCATGGACAAGCCCGCCAACTGCACACACGACCT...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCCGGATGCTGCCAAACTaGTTCTCCACGACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASRMLPN*FSTTQV
Trigger: CACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCG...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp ACCTTCTCGGTTGTCAATAAGTTAAAAATTAAAACTCTCCGCCATGTGGCCAGCGGTCGCAGGCCTCCGTaGTACCAGCCTTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: TFSVVNKLKIKTLRHVASGRRPP*YQPFPL
Trigger: AAGAGGAAAAGGCTGGTACAACGGAGGCCTGCGACC...GCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTGCTGGACGTACATTCTaGGCCGTCCCTCTATCGGCG +
Preference number: 5 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCAGRTF*AVPLSA
Trigger: CGCCGATAGAGGGACGGCCAAGAATGTACGTCCAGC...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS-3UTR CAA 90 bp TTGAAAGGTAGCAGTCCAGGCTATAAAACTCTAGAAGCATTGCGTAAGAAGTGTAACAACCTTTTAGGCTaGGAGGGGATCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LKGSSPGYKTLEALRKKCNNLLG*EGILQL
Trigger: GAGCTGGAGGATCCCCTCCAAGCCTAAAAGGTTGTT...ACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340107.8
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS CCA 72 bp GGCGTGCGGGGCGTGCAGGGCGCGCGGCCAGGGCCTTaGAGCTGGAGCTCTTGTGCCGGCCGGCATGGGACA +
Preference number: 6 (lower is better)
Translates to: GVRGVQGARPGP*SWSSCAGRHGT
Trigger: TGTCCCATGCCGGCCGGCACAAGAGCTCCAGCTCCAAGGCCCTGGCCGCGCGCCCTGCACGCCCCGCACGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS CCA 72 bp CGGGGCGTGCAGGGCGCGCGGCCAGGGCCTTGGAGCTaGAGCTCTTGTGCCGGCCGGCATGGGACAGAGTCG +
Preference number: 6 (lower is better)
Translates to: RGVQGARPGPWS*SSCAGRHGTES
Trigger: CGACTCTGTCCCATGCCGGCCGGCACAAGAGCTCCAGCTCCAAGGCCCTGGCCGCGCGCCCTGCACGCCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS CAA 90 bp GCGGGGCGTGCAGGGCGCGCGGCCAGGGCCTTGGAGCTGGAGCTCTaGTGCCGGCCGGCATGGGACAGAGTCGTTACCTGCTCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: AGRAGRAARALELEL*CRPAWDRVVTCSGP
Trigger: GGGCCCCGAGCAGGTAACGACTCTGTCCCATGCCGGCCGGCACAAGAGCTCCAGCTCCAAGGCCCTGGCCGCGCGCCCTGCACGCCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS GCA 72 bp GGGCGCGCGGCCAGGGCCTTGGAGCTGGAGCTCTTGTaGCGGCCGGCATGGGACAGAGTCGTTACCTGCTCG +
Preference number: 6 (lower is better)
Translates to: GRAARALELELL*RPAWDRVVTCS
Trigger: CGAGCAGGTAACGACTCTGTCCCATGCCGGCCGGCACAAGAGCTCCAGCTCCAAGGCCCTGGCCGCGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS CAA 72 bp GCAGGGCGCGCGGCCAGGGCCTTGGAGCTGGAGCTCTaGTGCCGGCCGGCATGGGACAGAGTCGTTACCTGC +
Preference number: 6 (lower is better)
Translates to: AGRAARALELEL*CRPAWDRVVTC
Trigger: GCAGGTAACGACTCTGTCCCATGCCGGCCGGCACAAGAGCTCCAGCTCCAAGGCCCTGGCCGCGCGCCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS CCA 72 bp GCAGCAGGGTGGGCTGCTAGGGACCCCTCACATTGTTaGGGACCAGTGGCCCTTCACGTCCGCGAGCCCCCA +
Preference number: 6 (lower is better)
Translates to: AAGWAARDPSHC*GPVALHVREPP
Trigger: TGGGGGCTCGCGGACGTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340107.8
ENST00000352904.6
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7
CDS CAA 90 bp TTGGTGGCTCGACAGAGGTACTCGCCCCCGTCCCGCTCCGACACATaGGCCAGGCGGAGGCGCACGTCGGCCTCCACACTCTCACTGATC +
Preference number: 6 (lower is better)
Translates to: LVARQRYSPPSRSDT*ARRRRTSASTLSLI
Trigger: GATCAGTGAGAGTGTGGAGGCCGACGTGCGCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGGGGCGAGTACCTCTGTCGAGCCACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260795.8
ENST00000340107.8
ENST00000474521.1
ENST00000643463.1
CDS CAA 90 bp GGGCCCTCCCCTGAGGACAGCCTTGCGATGCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTGCTGTCGC +
Preference number: 6 (lower is better)
Translates to: GPSPEDSLAMRTSGV*ELMDALDSRDTCCR
Trigger: GCGACAGCAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS TCA 72 bp CGGCATGGGACAGAGTCGTTACCTGCTCGGGGCCCGTaGACGCTCAGCCAAAAGGCCTTCTCGGCCACGCCT +
Preference number: 6 (lower is better)
Translates to: RHGTESLPARGP*TLSQKAFSATP
Trigger: AGGCGTGGCCGAGAAGGCCTTTTGGCTGAGCGTTCACGGGCCCCGAGCAGGTAACGACTCTGTCCCATGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS CAA 90 bp GGGCCCTCCCCTGAGGACAGCCTTGCGATGCGCACCAGTGGTGTGTaGGAGCTCATGGACGCGTTGGACTCCAGGGACACCTTGAGCACG +
Preference number: 6 (lower is better)
Translates to: GPSPEDSLAMRTSGV*ELMDALDSRDTLST
Trigger: CGTGCTCAAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352904.6
CDS GCA 72 bp CTCTTGTGCCGGCCGGCATGGGACAGAGTCGTTACCTaGTCGGGGCCCGTGAACGCTCAGCCAAAAGGCCTT +
Preference number: 6 (lower is better)
Translates to: LLCRPAWDRVVT*SGPVNAQPKGL
Trigger: AAGGCCTTTTGGCTGAGCGTTCACGGGCCCCGAGCAGGTAACGACTCTGTCCCATGCCGGCCGGCACAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474521.1
CDS CCA 72 bp GCCTTGCGATGCGCACCAGTGGTGTGTTGGAGCTCATaGACGCGTTGGACTCCAGGGACACCTGCTGTCGCT +
Preference number: 6 (lower is better)
Translates to: ALRCAPVVCWSS*TRWTPGTPAVA
Trigger: AGCGACAGCAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS CAA 72 bp CTCAGCCAAAAGGCCTTCTCGGCCACGCCTATGAAATaGGTGGCTCGACAGAGGTACTCGCCCCCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: LSQKAFSATPMK*VARQRYSPPSR
Trigger: GCGGGACGGGGGCGAGTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGCCGAGAAGGCCTTTTGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260795.8
ENST00000340107.8
ENST00000474521.1
ENST00000643463.1
CDS CAA 72 bp ATGCGCACCAGTGGTGTGTTGGAGCTCATGGACGCGTaGGACTCCAGGGACACCTGCTGTCGCTTGAGCGGG +
Preference number: 6 (lower is better)
Translates to: MRTSGVLELMDA*DSRDTCCRLSG
Trigger: CCCGCTCAAGCGACAGCAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481110.7
CDS CAA 72 bp AAGGTGACGTTGTGCAAGGAGAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCCGCCGTCTGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: KVTLCKERTSSS*SVVLAPAVCSG
Trigger: CCCCGAGCAGACGGCGGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCTCTCCTTGCACAACGTCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260795.8
CDS TCA 72 bp GAACGCTCAGCCAAAAGGCCTTCTCGGCCACGCCTATaGAATTGGTGGCTCGACAGAGGTACTCGCCCCCGT +
Preference number: 6 (lower is better)
Translates to: ERSAKRPSRPRL*NWWLDRGTRPR
Trigger: ACGGGGGCGAGTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGCCGAGAAGGCCTTTTGGCTGAGCGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260795.8
ENST00000340107.8
ENST00000474521.1
ENST00000643463.1
CDS CAA 72 bp AAGGTGACGTTGTGCAAGGAGAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCCGCCGTCTTGAGCACG +
Preference number: 6 (lower is better)
Translates to: KVTLCKERTSSS*SVVLAPAVLST
Trigger: CGTGCTCAAGACGGCGGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCTCTCCTTGCACAACGTCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412135.7
ENST00000440486.8
ENST00000481110.7