RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGFR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000066468

Ensembl transcript IDs: ENST00000336553.10, ENST00000346997.6, ENST00000351936.11, ENST00000356226.8, ENST00000357555.9, ENST00000358487.10, ENST00000359354.6, ENST00000360144.7, ENST00000369056.5, ENST00000369058.7, ENST00000369059.5, ENST00000369060.8, ENST00000369061.8, ENST00000457416.6, ENST00000463870.5, ENST00000467584.1, ENST00000478859.5, ENST00000490349.5, ENST00000491111.1, ENST00000491475.1, ENST00000604236.5, ENST00000611527.1, ENST00000613048.4, ENST00000613324.4, ENST00000636922.1, ENST00000638709.1, ENST00000638709.2, ENST00000682296.1, ENST00000682400.1, ENST00000682550.1, ENST00000682772.1, ENST00000682904.1, ENST00000683029.1, ENST00000683035.1, ENST00000683211.1, ENST00000683250.1, ENST00000683418.1, ENST00000683678.1, ENST00000683885.1, ENST00000684153.1, ENST00000684516.1

Found 1724 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAA +
Preference number: 1 (lower is better)
Translates to: VHLESYWSTASTHGR*EGLHGGLWQSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR CCA 90 bp CTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: LVHSQYARQVRGVTW*LVAVHCSRNLLLLL
Trigger: CAGGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR CCA 90 bp CTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTC +
Preference number: 1 (lower is better)
Translates to: LLVHSQYARQVRGVT*WLVAVHCSRNLLLL
Trigger: GAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR CCA 90 bp CTCCTCAGGAACACGGTTAATGTCATAGGAGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTATTCTCGGAGGTTGCCTTTAGAGGC +
Preference number: 1 (lower is better)
Translates to: LLRNTVNVIGVLHPG*PPGSEVFSEVAFRG
Trigger: GCCTCTAAAGGCAACCTCCGAGAATACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTACTCCTATGACATTAACCGTGTTCCTGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR CCA 90 bp GAAAGTAGACACAGCGGGGAAAGGCAAGGGCCGCGGGACACAGCATaGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTC +
Preference number: 1 (lower is better)
Translates to: ESRHSGERQGPRDTA*RRRVDKKTGDRQNF
Trigger: GAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGCTGTGTCTACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
3UTR CCA 90 bp AAGAGAGGCGTGTTGTTATCCTCACCAGCGGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCGAAACTGTTACCTGTCTCCGCAGGG +
Preference number: 1 (lower is better)
Translates to: KRGVLLSSPAGCWSS*RSWTQPKLLPVSAG
Trigger: CCCTGCGGAGACAGGTAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACACGCCTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR CCA 90 bp CTGCCGTTGAAGAGAGGCGTGTTGTTATCCTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGGACTCAGCCGAAACTGTTACCTGTC +
Preference number: 1 (lower is better)
Translates to: LPLKRGVLLSSPAGC*SSWRSWTQPKLLPV
Trigger: GACAGGTAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAACGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR CCA 90 bp ACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGGTTCGTAAGGCATGGGGTCTGGAGA +
Preference number: 1 (lower is better)
Translates to: TGRHSHSCFNTAVYV*ILRKAWFVRHGVWR
Trigger: TCTCCAGACCCCATGCCTTACGAACCATGCCTTCCTCAGTATCCACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604236.5
ENST00000638709.1
3UTR CCA 90 bp GGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTGCGTTGACG +
Preference number: 1 (lower is better)
Translates to: GLSSRNGLRHLLRGR*YHLSWEVQLDVALT
Trigger: CGTCAACGCAACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR GCA 90 bp AAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTT +
Preference number: 1 (lower is better)
Translates to: KRTLVPFILGSPVRR*VDVMTGLHTKMKHL
Trigger: AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR CCA 90 bp AAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAATaGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTG +
Preference number: 1 (lower is better)
Translates to: KHILLSFQLRSVLKE*IKASFKRTLVPFIL
Trigger: CAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR TCA 90 bp AATCTTTACACATATGCTGATTACTTTTCCAATTATTTACTCCTCTaGTCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGG +
Preference number: 1 (lower is better)
Translates to: NLYTYADYFSNYLLL*SIYTSGDNKLWEAW
Trigger: CCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAAAAGTAATCAGCATATGTGTAAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR GCA 90 bp TTAAATACTTTCTCCAATTTTGTAACACATAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCA +
Preference number: 1 (lower is better)
Translates to: LNTFSNFVTHKISVI*IHLARLLQSEWVFP
Trigger: TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAAATTGGAGAAAGTATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: PQPVRTAGERGYMVACGSGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp CAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACCAGAACTTCCCTCCATaGTCCTCTCTCGGGGACCAT +
Preference number: 2 (lower is better)
Translates to: QGPRDTAWRRRVDKKTGDQNFPP*SSLGDH
Trigger: ATGGTCCCCGAGAGAGGAGCATGGAGGGAAGTTCTG...GTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
3UTR-3UTR CCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: EGRTHVHLESYWSTASTHVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATTCTCTTCCAGGCGCTaGCAGAACTGTCAACCATGC +
Preference number: 2 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAFSSRR*QNCQPC
Trigger: GCATGGTTGACAGTTCTGCCAGCGCCTGGAAGAGAA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR GCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 2 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 2 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp AGGAACACGGTTAATGTCATAGGAGTACTCCATCCCGGGTGGCCTCCGGGCTCGAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTA +
Preference number: 2 (lower is better)
Translates to: RNTVNVIGVLHPGWPPGSSSWRS*TQPKLL
Trigger: TAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...CGAGCCCGGAGGCCACCCGGGATGGAGTACTCCTATGACATTAACCGTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR TCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGGTCAACCATGCAGAGTaGAAGGATATCCCAATAGAA +
Preference number: 2 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERVNHAE*KDIPIE
Trigger: TTCTATTGGGATATCCTTTCACTCTGCATGGTTGAC...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: VHSQYARQVRGVTWWLVATFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 2 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPRPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGGAAGCCGCCCATTGGTaGTCTTTTTGTAATAGTCTA +
Preference number: 2 (lower is better)
Translates to: TSTLSPTGPQPVRTAGEREAAHW*SFCNSL
Trigger: TAGACTATTACAAAAAGACCACCAATGGGCGGCTTC...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR TCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 2 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 2 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSSPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR CAA 90 bp CCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: PIITKLTRKAERTST*SPTGPQPVRTAGER
Trigger: CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp CCTGCCAGCATGGGGGTGTCTGCCGTTGAAGAGAGGCGTGTTGTTATCCTCACCTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 2 (lower is better)
Translates to: PASMGVSAVEERRVVILTSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...GGTGAGGATAACAACACGCCTCTCTTCAACGGCAGACACCCCCATGCTGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR TCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTTAAGAAGACCCCTATaGAGTAAATGGCTATCTCCA +
Preference number: 2 (lower is better)
Translates to: EGRTHVHLESYWSTASTHLRRPL*SKWLSP
Trigger: TGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp CCTGCCAGCATGGGGGTGTCTGCCGTTGAAGAGAGGCGTGTTGTTATCCTCACCATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: PASMGVSAVEERRVVILTIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...GGTGAGGATAACAACACGCCTCTCTTCAACGGCAGACACCCCCATGCTGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAAAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: AREKHILLSFQLRSVLKENARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: SCQREAHSAIISTKVCPQNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTCACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 2 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCSPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR TCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 2 (lower is better)
Translates to: IKASFKRTLVPFILGSPVSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 2 (lower is better)
Translates to: EWIKASFKRTLVPFILGSSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 2 (lower is better)
Translates to: NYYKINKEGRTHVHLESYSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 2 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 2 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp TCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: SQCCPVWGQADTVIHVLTLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...TGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604236.5
ENST00000638709.1
3UTR-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: NYYKINKEGRTHVHLESYILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp TCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACATTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: SQCCPVWGQADTVIHVLTLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...TGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604236.5
ENST00000638709.1
3UTR-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAACACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 2 (lower is better)
Translates to: SCQREAHSAIISTKVCPQHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACAAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 2 (lower is better)
Translates to: SQCCPVWGQADTVIHVLTRHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...TGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR GCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 2 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 2 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 2 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 2 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSSPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCTTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: CRYEAGSFGEVLPELDESLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGTTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp TTCCTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: FLIGCESENSIQVFYQLLVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...AAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: WIKASFKRTLVPFILGSPVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCACACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 2 (lower is better)
Translates to: WIKASFKRTLVPFILGSPHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTACGGCTATTGCAAAGTaGGTGGGTGTTTCCAAAGCA +
Preference number: 2 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTTAIAK*VGVSKA
Trigger: TGCTTTGGAAACACCCACTCACTTTGCAATAGCCGT...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR TCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 2 (lower is better)
Translates to: FVTHKISVICIHLARLLQSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 2 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: NYYKINKEGRTHVHLESYVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: THKISVICIHLARLLQSEVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 2 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000604236.5
ENST00000638709.1
3UTR-3UTR TCA 90 bp GTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCCTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 2 (lower is better)
Translates to: VLSCLGTGRHSHSCFNTALRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...GGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638709.1
3UTR-3UTR TCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 2 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TTAAAACCAAAGGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTATCCACTTTACACAGATaGCGCTTGGGAACCATGAGG +
Preference number: 2 (lower is better)
Translates to: LKPKVCYSTSVPFSPAQLSTLHR*RLGTMR
Trigger: CCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGA...TAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACCTTTGGTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
3UTR-3UTR TCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 2 (lower is better)
Translates to: KSSPIITKLTRKAERTSTGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR TCA 90 bp TTCCTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: FLIGCESENSIQVFYQLLMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...AAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAGGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR GCA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 2 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCSPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638709.1
3UTR-3UTR GCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCACTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: WIKASFKRTLVPFILGSPLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTTTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 2 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR GCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 2 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMSLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR CAA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGTTGCGTTGACGTAATGACAGGGTTG +
Preference number: 2 (lower is better)
Translates to: EWIKASFKRTLVPFI*GSPVRRCVDVMTGL
Trigger: CAACCCTGTCATTACGTCAACGCAACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGGGCTGGATCTTTTGGTaGGGTCCTGCCAGAATTAGA +
Preference number: 2 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQGWIFW*GPARIR
Trigger: TCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCC...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: KILTGVSNAKESGSHYQNLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAATTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: SCQREAHSAIISTKVCPQLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGAAGCAGAAGGCCAGCTaGCAGAGAGAAGCACATTCT +
Preference number: 2 (lower is better)
Translates to: THKISVICIHLARLLQSEKQKAS*QREAHS
Trigger: AGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTT...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGATCTTGCACGGCTATTaGAAAGTGAGTGGGTGTTTC +
Preference number: 2 (lower is better)
Translates to: VICIHLARLLQSEWVFPKILHGY*KVSGCF
Trigger: GAAACACCCACTCACTTTGCAATAGCCGTGCAAGAT...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: SSPIITKLTRKAERTSTLLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGCAGAACTGTCAACCATaGAGAGTGAAAGGATATCCC +
Preference number: 2 (lower is better)
Translates to: YYKINKEGRTHVHLESYWQNCQP*RVKGYP
Trigger: GGGATATCCTTTCACTCTGCATGGTTGACAGTTCTG...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCACTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSLLRGR*YHLSWE
Trigger: TTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAG...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 2 (lower is better)
Translates to: LKILTGVSNAKESGSHYQLRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 2 (lower is better)
Translates to: LKILTGVSNAKESGSHYQTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 2 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTCCTGCCAGAATTAGATaGAAGCAATCCCTTAAAAAG +
Preference number: 2 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTPARIR*KQSLKK
Trigger: CTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGG...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTACGGCTATTGCAAAGTaGGTGGGTGTTTCCAAAGCA +
Preference number: 2 (lower is better)
Translates to: EWIKASFKRTLVPFILGSTAIAK*VGVSKA
Trigger: TGCTTTGGAAACACCCACTCACTTTGCAATAGCCGT...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 2 (lower is better)
Translates to: IKASFKRTLVPFILGSPVTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTCAACGCCAAAGAGTCTaGAAGCCATTATCAAAATTC +
Preference number: 2 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTQRQRV*KPLSKF
Trigger: GAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTG...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: YYKINKEGRTHVHLESYWTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp TTCCTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: FLIGCESENSIQVFYQLLSCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...AAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR TCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAATCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 2 (lower is better)
Translates to: SCQREAHSAIISTKVCPQSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 2 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 2 (lower is better)
Translates to: KILTGVSNAKESGSHYQNSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 2 (lower is better)
Translates to: KILTGVSNAKESGSHYQNTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATCCTGCCAGAATTAGATaGAAGCAATCCCTTAAAAAG +
Preference number: 2 (lower is better)
Translates to: KILTGVSNAKESGSHYQNPARIR*KQSLKK
Trigger: CTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGG...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 2 (lower is better)
Translates to: SSPIITKLTRKAERTSTLVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: NYYKINKEGRTHVHLESYLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 2 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRSPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTA +
Preference number: 2 (lower is better)
Translates to: KILTGVSNAKESGSHYQNKISVI*IHLARL
Trigger: TAGCCGTGCAAGATGAATGCAGATTACACTGATCTT...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAAAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTA +
Preference number: 2 (lower is better)
Translates to: AREKHILLSFQLRSVLKEKISVI*IHLARL
Trigger: TAGCCGTGCAAGATGAATGCAGATTACACTGATCTT...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAACTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: FVTHKISVICIHLARLLQLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTCTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLLLRGR*YHLSWE
Trigger: TTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAG...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTCAACGCCAAAGAGTCTaGAAGCCATTATCAAAATTC +
Preference number: 2 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLQRQRV*KPLSKF
Trigger: GAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTG...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAAATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: AREKHILLSFQLRSVLKEIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: KILTGVSNAKESGSHYQNSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 2 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 2 (lower is better)
Translates to: SVICIHLARLLQSEWVFPEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR TCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 2 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCATCTTGCACGGCTATTaGAAAGTGAGTGGGTGTTTC +
Preference number: 2 (lower is better)
Translates to: KSSPIITKLTRKAERTSTILHGY*KVSGCF
Trigger: GAAACACCCACTCACTTTGCAATAGCCGTGCAAGAT...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: SSPIITKLTRKAERTSTLTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 2 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 2 (lower is better)
Translates to: IKASFKRTLVPFILGSPVLRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 2 (lower is better)
Translates to: EWIKASFKRTLVPFILGSLRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 2 (lower is better)
Translates to: WIKASFKRTLVPFILGSPEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 2 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 2 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAATTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: FVTHKISVICIHLARLLQLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGCTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: THKISVICIHLARLLQSELLRGR*YHLSWE
Trigger: TTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAG...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR CAA 90 bp CACTCTGACAAAAATGTATTTATAAGCTCATATACATGGTTCCCTTaGCACAGAGGAAATAGATGCCAGGAACAGACACTGAATTGGTAC +
Preference number: 2 (lower is better)
Translates to: HSDKNVFISSYTWFP*HRGNRCQEQTLNWY
Trigger: GTACCAATTCAGTGTCTGTTCCTGGCATCTATTTCCTCTGTGCAAAGGGAACCATGTATATGAGCTTATAAATACATTTTTGTCAGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359354.6
3UTR-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 2 (lower is better)
Translates to: THKISVICIHLARLLQSEEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR TCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCCCTGCCAGAATTAGATaGAAGCAATCCCTTAAAAAG +
Preference number: 2 (lower is better)
Translates to: KSSPIITKLTRKAERTSTPARIR*KQSLKK
Trigger: CTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGG...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 2 (lower is better)
Translates to: WIKASFKRTLVPFILGSPVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 2 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAACCTGCCAGAATTAGATaGAAGCAATCCCTTAAAAAG +
Preference number: 2 (lower is better)
Translates to: FVTHKISVICIHLARLLQPARIR*KQSLKK
Trigger: CTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGG...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR TCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 2 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTTGGTACCATTTATCTTaGGAAGTCCAGTTAGACGTT +
Preference number: 2 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFWYHLS*EVQLDV
Trigger: AACGTCTAACTGGACTTCCCAAGATAAATGGTACCA...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR TCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR GCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 2 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR GCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 2 (lower is better)
Translates to: FVTHKISVICIHLARLLQVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTCTGTCCTCAAGGAATaGATTAAGGCATCTTTTAAG +
Preference number: 2 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFSVLKE*IKASFK
Trigger: CTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR CCA 72 bp CACAGCGGGGAAAGGCAAGGGCCGCGGGACACAGCATaGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGG +
Preference number: 3 (lower is better)
Translates to: HSGERQGPRDTA*RRRVDKKTGDR
Trigger: CCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
3UTR-3UTR CAA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCACCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 3 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR GCA 72 bp ACCTGTCTCCGCAGGGGGATACGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTGAAGTCTGGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: TCLRRGIRLVSL*TAGWLLKSGFL
Trigger: CAAGAAGCCAGACTTCAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTATCCCCCTGCGGAGACAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR CCA 72 bp TCCTCACCAGCGGGGTGTTGGAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTACCTGTCTCCGCAGGG +
Preference number: 3 (lower is better)
Translates to: SSPAGCWSSWRS*TQPKLLPVSAG
Trigger: CCCTGCGGAGACAGGTAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR CCA 72 bp CACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTT +
Preference number: 3 (lower is better)
Translates to: HSQYARQVRGVT*WLVAVHCSRNL
Trigger: AAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR CCA 72 bp AACACGGTTAATGTCATAGGAGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTATTCTCGGAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: NTVNVIGVLHPG*PPGSEVFSEVA
Trigger: GGCAACCTCCGAGAATACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTACTCCTATGACATTAACCGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CAA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 3 (lower is better)
Translates to: GERGYMVACGSPLLQKPSERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR CCA 72 bp AGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTT +
Preference number: 3 (lower is better)
Translates to: SQYARQVRGVTW*LVAVHCSRNLL
Trigger: AAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp CGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGACCCCTATGCAGCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: RHRMTVTTIQAIKKTPMQPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...CTGCATAGGGGTCTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR CCA 72 bp GTGTTGTTATCCTCACCAGCGGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCGAAACTGTTACCTGTC +
Preference number: 3 (lower is better)
Translates to: VLLSSPAGCWSS*RSWTQPKLLPV
Trigger: GACAGGTAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CAA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: VHSQYARQVRGVTWWLVATYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCATGAGGCTGGATCTTTaGGTGAGGTCCTGCCAGAAT +
Preference number: 3 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSMRLDL*VRSCQN
Trigger: ATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCAT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp GTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: VLSCLGTGRHSHSCFNTAWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...GGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CAA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 3 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 3 (lower is better)
Translates to: CRYEAGSFGEVLPELDESERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCATTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPLKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CAA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR TCA 72 bp CTGGCTTCTTGGTCGTGTTCTTCATTCGGCACAGGATaGCTGTTACCACCATACAGGCGATTAAGAAGACCC +
Preference number: 3 (lower is better)
Translates to: LASWSCSSFGTG*LLPPYRRLRRP
Trigger: GGGTCTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGAAGAACACGACCAAGAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CAA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp CGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGACCCCTATGCAGACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: RHRMTVTTIQAIKKTPMQTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...CTGCATAGGGGTCTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR-3UTR CAA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 3 (lower is better)
Translates to: NYYKINKEGRTHVHLESYERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACATCTTGCACGGCTATaGCAAAGTGAGTGGGTGTTT +
Preference number: 3 (lower is better)
Translates to: LKILTGVSNAKESGSHYQHLARL*QSEWVF
Trigger: AAACACCCACTCACTTTGCAATAGCCGTGCAAGATG...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CAA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGACCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 3 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTCTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 3 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTLVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCATCTTGCACGGCTATaGCAAAGTGAGTGGGTGTTT +
Preference number: 3 (lower is better)
Translates to: VICIHLARLLQSEWVFPKHLARL*QSEWVF
Trigger: AAACACCCACTCACTTTGCAATAGCCGTGCAAGATG...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR GCA 72 bp CTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGGTTGCACACCAAAATG +
Preference number: 3 (lower is better)
Translates to: LVPFILGSPVRR*VDVMTGLHTKM
Trigger: CATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR CCA 72 bp CACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGGTTCGTAAGGCATGGG +
Preference number: 3 (lower is better)
Translates to: HSHSCFNTAVYV*ILRKAWFVRHG
Trigger: CCCATGCCTTACGAACCATGCCTTCCTCAGTATCCACACATAAACGGCAGTGTTAAAACATGAATGACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604236.5
ENST00000638709.1
3UTR-3UTR CAA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 3 (lower is better)
Translates to: KILTGVSNAKESGSHYQNDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 3 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMLVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAACTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 3 (lower is better)
Translates to: SCQREAHSAIISTKVCPQLVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGATGAGGCTGGATCTTTaGGTGAGGTCCTGCCAGAAT +
Preference number: 3 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQMRLDL*VRSCQN
Trigger: ATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCAT...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 3 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR CCA 72 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTaGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: FQLFTPLIHIYK*RQQALGGMVSL
Trigger: CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 3 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 3 (lower is better)
Translates to: SVICIHLARLLQSEWVFPNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 3 (lower is better)
Translates to: KSSPIITKLTRKAERTSTSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
3UTR GCA 72 bp AAAGGTCTGCTACAGCACATCTGTACCCTTTTCACCTaGCCAATTAACATTTTCAGAGTAATCTCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: KGLLQHICTLFT*PINIFRVISAS
Trigger: GGAAGCTGAGATTACTCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
3UTR CCA 72 bp GAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTaGAAGCCATTATCAAAATTCACTGAAGAGAATACA +
Preference number: 3 (lower is better)
Translates to: EDPNRRLQRQRV*KPLSKFTEENT
Trigger: TGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 3 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGCTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 3 (lower is better)
Translates to: THKISVICIHLARLLQSELVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR CCA 72 bp TCAAGGAATGGATTAAGGCATCTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAAGTCCAGTTAGACGTT +
Preference number: 3 (lower is better)
Translates to: SRNGLRHLLRGR*YHLSWEVQLDV
Trigger: AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: THKISVICIHLARLLQSETYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CAA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 3 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 3 (lower is better)
Translates to: IKASFKRTLVPFILGSPVNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
3UTR-3UTR CAA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 3 (lower is better)
Translates to: FVTHKISVICIHLARLLQNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
3UTR GCA 72 bp TTCTCCAATTTTGTAACACATAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTATTGCAAAGTGAGTGG +
Preference number: 3 (lower is better)
Translates to: FSNFVTHKISVI*IHLARLLQSEW
Trigger: CCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAAATTGGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCGCGTGGGTCGGGATaGAGAAAGCGACGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSPRGSG*RKRRAR
Trigger: CCGGGCTCGTCGCTTTCTCCATCCCGACCCACGCGG...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTCCCCGCGCCCCGCGTaGGTCGGGATGGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHSPRPA*VGMEKA
Trigger: CGCTTTCTCCATCCCGACCCACGCGGGGCGCGGGGA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCTGCCAGCATGGGGGTGTCTGCCGTTGAAGAGAGGCGTGTTGTTATCCTCACCCCGCGTGGGTCGGGATaGAGAAAGCGACGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PASMGVSAVEERRVVILTPRGSG*RKRRAR
Trigger: CCGGGCTCGTCGCTTTCTCCATCCCGACCCACGCGG...GGTGAGGATAACAACACGCCTCTCTTCAACGGCAGACACCCCCATGCTGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCVLHPG*PPGSEV
Trigger: TACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTAC...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTGGAGGATGGGCCGGTaGGGCGATCGCTCCACAACA +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCWRMGR*GDRSTT
Trigger: TGTTGTGGAGCGATCGCCTCACCGGCCCATCCTCCA...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTTGGAGGATGGGCCGGTaGGGCGATCGCTCCACAACA +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSWRMGR*GDRSTT
Trigger: TGTTGTGGAGCGATCGCCTCACCGGCCCATCCTCCA...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGCCGGCTGGCTGCTaGAGTCTGGCTTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLQPAGC*SLASWS
Trigger: CGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTG...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCAGCCGGCTGGCTGCTaGAGTCTGGCTTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSQPAGC*SLASWS
Trigger: CGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTG...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGEAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGCGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGERLVSL*TAGWLL
Trigger: CAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACG...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCCCCGCGCCCCGCGTaGGTCGGGATGGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: GERGYMVACGSPLLQKPSSPRPA*VGMEKA
Trigger: CGCTTTCTCCATCCCGACCCACGCGGGGCGCGGGGA...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGERPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHVLHPG*PPGSEV
Trigger: TACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTAC...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCCGCGGGACACAGCATaGCGCAGAAGAGTCGACAAG +
Preference number: 4 (lower is better)
Translates to: GPRDTAWRRRVDKKTGDRPRDTA*RRRVDK
Trigger: CTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGG...CCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR TCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGCTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGCGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGCGACAAGAAGACAGGTaGCAGGCAGAACTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SGERQGPRDTAWRRRVDKRQEDR*QAELPS
Trigger: GGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCG...CTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR GCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGAGGCGCTGCCGCTGCTaGTGCAGTCACTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERRRCRC*CSHLNG
Trigger: GCCATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCT...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCCCGAGGCGCTGCCGCTaGTGCTGCAGTCACTTGAAT +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCPRRCR*CCSHLN
Trigger: ATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCTCGG...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGCTCCCAAAGGCTTCTTaGTGGGGTCAGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGELPKAS*WGQFCG
Trigger: CCCGCAGAACTGACCCCAGCAAGAAGCCTTTGGGAG...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCCAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCQKSGP*VFAGAK
Trigger: CTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTG...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGCCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGEPNAEE*SLGLRR
Trigger: CCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGG...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCTCCCCGCGCCCCGCGTaGGTCGGGATGGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLSPRPA*VGMEKA
Trigger: CGCTTTCTCCATCCCGACCCACGCGGGGCGCGGGGA...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGCTCCTCCGACCACTGTaGAGGCATTTGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERLLRPL*RHLPAV
Trigger: GACTGCCGGCAAATGCCTCCACAGTGGTCGGAGGAG...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGESPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLRPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSRPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGEGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAGCGGCCTTGCTGTTTTaGCAGGACAGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRAALLF*QDSEPG
Trigger: GCCTGGCTCACTGTCCTGCCAAAACAGCAAGGCCGC...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCCACTGCTTCCGCCATaGCCACTTGCCCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLPLLPP*PLAQSN
Trigger: GTTGCTTTGGGCAAGTGGTCATGGCGGAAGCAGTGG...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGGAACACGGTTAATGTCATAGGAGTACTCCATCCCGGGTGGCCTCCGGGCTCGAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RNTVNVIGVLHPGWPPGSSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...CGAGCCCGGAGGCCACCCGGGATGGAGTACTCCTATGACATTAACCGTGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAACGACAAGAAGACAGGTaGCAGGCAGAACTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGKARAAGHSMAQKSRQERQEDR*QAELPS
Trigger: GGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCG...TTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR GCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCACTTTGCTCGCGAGTTaGGAAGGCTCAGAGCGCGCA +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCTLLAS*EGSERA
Trigger: TGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGT...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSMTPAG*PRIWGT
Trigger: CGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCAT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCGCTGCCGCTGCTGCTaGAGTCACTTGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSRCRCC*SHLNGN
Trigger: GTTGCCATTCAAGTGACTGCAGCAGCAGCGGCAGCG...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACAGGCGCTGCCGCTGCTaGTGCAGTCACTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHRRCRC*CSHLNG
Trigger: GCCATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCT...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACCCGAGGCGCTGCCGCTaGTGCTGCAGTCACTTGAAT +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHPRRCR*CCSHLN
Trigger: ATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCTCGG...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTCAGGAAAGTAGACACAGCGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCCAGAACTTCCCTCCATaGTCCTCTCTCGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: VRKVDTAGKGKGRGTQHGQNFPP*SSLGDH
Trigger: ATGGTCCCCGAGAGAGGAGCATGGAGGGAAGTTCTG...GCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGCTGTGTCTACTTTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR CCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGCCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERPNAEE*SLGLRR
Trigger: CCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGG...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCACCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAPNAEE*SLGLRR
Trigger: CCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGG...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGCTGCAGTCACTTGAATaGCAACGCTCCTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERLQSLE*QRSSAT
Trigger: GGTCGCGGAGGAGCGTTGCCATTCAAGTGACTGCAG...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGEVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCTGGAGGATGGGCCGGTaGGGCGATCGCTCCACAACA +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSWRMGR*GDRSTT
Trigger: TGTTGTGGAGCGATCGCCTCACCGGCCCATCCTCCA...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACACTTTGCTCGCGAGTTaGGAAGGCTCAGAGCGCGCA +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHTLLAS*EGSERA
Trigger: TGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGT...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGACTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGTCCCCGCGCCCCGCGTaGGTCGGGATGGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWSPRPA*VGMEKA
Trigger: CGCTTTCTCCATCCCGACCCACGCGGGGCGCGGGGA...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACCTGCAGTCACTTGAATaGCAACGCTCCTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHLQSLE*QRSSAT
Trigger: GGTCGCGGAGGAGCGTTGCCATTCAAGTGACTGCAG...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGACTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHGCWSS*RSWTQP
Trigger: CGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCC...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGACACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSLGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCAGCCGGCTGGCTGCTaGAGTCTGGCTTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLQPAGC*SLASWS
Trigger: CGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTG...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTCTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: GERGYMVACGSPLLQKPSLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCACTCAGGCTTGGCGTTaGCTCCACCAAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLTQAWR*LHQTLL
Trigger: GAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGT...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTAGGCGCTGCCGCTGCTaGTGCAGTCACTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSRRCRC*CSHLNG
Trigger: GCCATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCACTGTGGAGGCATTTaGCGGCAGTCCGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSHCGGI*RQSGLE
Trigger: CTCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGCGGGCCCGTATTTACTaGCGTTCTTTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERRARIY*RSFPRA
Trigger: AGCACGTGGAAAAGAACGGCAGTAAATACGGGCCCG...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSRLVSL*TAGWLL
Trigger: CAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACG...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGELVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATTGTTGGGCCCCAAGTaGACCCCATCCTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVALLGPK*TPSLVQ
Trigger: TTGGACTAAGGATGGGGTGCACTTGGGGCCCAACAA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGAAAGGACTCAGGCTTaGCGTTGCCTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAERTQA*RCLHQT
Trigger: AGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTC...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTCAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: GERGYMVACGSPLLQKPSQKSGP*VFAGAK
Trigger: CTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTG...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCCGCGTGGGTCGGGATaGAGAAAGCGACGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLPRGSG*RKRRAR
Trigger: CCGGGCTCGTCGCTTTCTCCATCCCGACCCACGCGG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTCCCCGCGCCCCGCGTaGGTCGGGATGGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPSPRPA*VGMEKA
Trigger: CGCTTTCTCCATCCCGACCCACGCGGGGCGCGGGGA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTCTCCTCCGACCACTGTaGAGGCATTTGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GERGYMVACGSPLLQKPSLLRPL*RHLPAV
Trigger: GACTGCCGGCAAATGCCTCCACAGTGGTCGGAGGAG...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCTCCTCCGACCACTGTaGAGGCATTTGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSLLRPL*RHLPAV
Trigger: GACTGCCGGCAAATGCCTCCACAGTGGTCGGAGGAG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
3UTR CAA 72 bp CCAGCATGGGGGTGTCTGCCGTTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGGTGTTGGAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: PAWGCLPLKRGV*LSSPAGCWSSW
Trigger: CCATGAACTCCAACACCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAACGGCAGACACCCCCATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTTATCCTCAACTAAACTaGAGGAGGGCCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSYPQLN*RRAGPG
Trigger: CCCTGGCCCGGCCCTCCTTCAGTTTAGTTGAGGATA...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCSRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCCACTGCTTCCGCCATaGCCACTTGCCCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSPLLPP*PLAQSN
Trigger: GTTGCTTTGGGCAAGTGGTCATGGCGGAAGCAGTGG...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCGCGAGCCCCCTAAAGTaGAGATCTCCCACATTAACA +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLASPLK*RSPTLT
Trigger: TGTTAATGTGGGAGATCTTCACTTTAGGGGGCTCGC...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCCTCATCATCTCCGGATaGGATGGCATCTGTGACATT +
Preference number: 4 (lower is better)
Translates to: GRGTQHGAEESTRRQVTGLIISG*DGICDI
Trigger: AATGTCACAGATGCCATCTCATCCGGAGATGATGAG...GCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR TCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCCGCCTCGGTCACATTaGACAGAGCCAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSPPRSH*TEPALL
Trigger: CAGAAGTGCTGGCTCTGTTCAATGTGACCGAGGCGG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCGCTGCCGCTGCTGCTaGAGTCACTTGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSRCRCC*SHLNGN
Trigger: GTTGCCATTCAAGTGACTGCAGCAGCAGCGGCAGCG...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGGACGTTAATCCCATCTaGACACTTCCTCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERDVNPI*TLPLRA
Trigger: TGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCGACGTTAATCCCATCTaGACACTTCCTCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCDVNPI*TLPLRA
Trigger: TGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: TQHGAEESTRRQVTGRTSGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...GGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611527.1
CDS-3UTR GCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCACTGTGGAGGCATTTaGCGGCAGTCCGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPHCGGI*RQSGLE
Trigger: CTCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTG...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCGTTCTTTTCCACGTaGTTGATCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSPFFST*LIHWMW
Trigger: CCACATCCAGTGGATCAAGCACGTGGAAAAGAACGG...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTGTGGCGCCCTTTATCTaGAAGTACTCCCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSVAPFI*KYSPIS
Trigger: GCTTATTGGGGAGTACTTGCAGATAAAGGGCGCCAC...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR GCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCGTGGCGCCCTTTATCTaGAAGTACTCCCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCVAPFI*KYSPIS
Trigger: GCTTATTGGGGAGTACTTGCAGATAAAGGGCGCCAC...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCCGCGTGGGTCGGGATaGAGAAAGCGACGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVPRGSG*RKRRAR
Trigger: CCGGGCTCGTCGCTTTCTCCATCCCGACCCACGCGG...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTCCGCGTGGGTCGGGATaGAGAAAGCGACGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTPRGSG*RKRRAR
Trigger: CCGGGCTCGTCGCTTTCTCCATCCCGACCCACGCGG...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCTGCAGTCACTTGAATaGCAACGCTCCTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSLQSLE*QRSSAT
Trigger: GGTCGCGGAGGAGCGTTGCCATTCAAGTGACTGCAG...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCAGGAAAGTAGACACAGCGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCCATCTCCGGATGAGATaGCATCTTCTGGCTCTAATG +
Preference number: 4 (lower is better)
Translates to: VRKVDTAGKGKGRGTQHGHLRMR*HLLALM
Trigger: CATTAGAGCCAGAAGATGCCATCTCATCCGGAGATG...GCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGCTGTGTCTACTTTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611527.1
CDS-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSGCWSS*RSWTQP
Trigger: CGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCC...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSGCWSS*RSWTQP
Trigger: CGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCC...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAATCAAACAGGGCTTCTaGAGCCATCCACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAIKQGF*SHPLDW
Trigger: CCAGTCAAGTGGATGGCTCCAGAAGCCCTGTTTGAT...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVALHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTTTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGCGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: SGERQGPRDTAWRRRVDKCYCSH*QNLPHH
Trigger: ATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACA...CTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR TCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTGGTGGTACGTGTGATTaGTGGACCCGTATTCATTCT +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSGGTCD*WTRIHS
Trigger: AGAATGAATACGGGTCCATCAATCACACGTACCACC...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCGGTGGTACGTGTGATTaGTGGACCCGTATTCATTCT +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCGGTCD*WTRIHS
Trigger: AGAATGAATACGGGTCCATCAATCACACGTACCACC...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHSRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCTGCCAGCATGGGGGTGTCTGCCGTTGAAGAGAGGCGTGTTGTTATCCTCACCTCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: PASMGVSAVEERRVVILTSRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...GGTGAGGATAACAACACGCCTCTCTTCAACGGCAGACACCCCCATGCTGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTGGAGGATGGGCCGGTaGGGCGATCGCTCCACAACA +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLWRMGR*GDRSTT
Trigger: TGTTGTGGAGCGATCGCCTCACCGGCCCATCCTCCA...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVARHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTGCCTCCACCAAACTTTaGTCGCGAGTTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSASTKL*SRVAKA
Trigger: AGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGC...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPMTPAG*PRIWGT
Trigger: CGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCAT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGACGTTAATCCCATCTaGACACTTCCTCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHDVNPI*TLPLRA
Trigger: TGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVASLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCTGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCTCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCACAGAACTTCCCTCCATaGTCCTCTCTCGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: AWRRRVDKKTGDRQNFPPQNFPP*SSLGDH
Trigger: ATGGTCCCCGAGAGAGGAGCATGGAGGGAAGTTCTG...TGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPVLHPG*PPGSEV
Trigger: TACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTAC...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVVLHPG*PPGSEV
Trigger: TACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTAC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPVLHPG*PPGSEV
Trigger: TACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTAC...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSSHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGESCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTA +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLSSWRS*TQPKLL
Trigger: TAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTGTCTACAGTCCTACTaGCAGTACAAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCCLQSY*QYKHRG
Trigger: GCCTCTATGCTTGTACTGCCAGTAGGACTGTAGACA...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSTAVYV*ILRKAW
Trigger: CCATGCCTTCCTCAGTATCCACACATAAACGGCAGT...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGCTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWLGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTGGAGGATGGGCCGGTaGGGCGATCGCTCCACAACA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVWRMGR*GDRSTT
Trigger: TGTTGTGGAGCGATCGCCTCACCGGCCCATCCTCCA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCGGCTGGCTGCTaGAGTCTGGCTTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPQPAGC*SLASWS
Trigger: CGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTG...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCAGCCGGCTGGCTGCTaGAGTCTGGCTTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVQPAGC*SLASWS
Trigger: CGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTG...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGCTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCTTCTACCAACTGCTTaGACGTTGGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSLLPTA*TLVSGR
Trigger: CCTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAG...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GCGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTT +
Preference number: 4 (lower is better)
Translates to: AGKGKGRGTQHGAEESTRTYTSG*EIWYLV
Trigger: AACCAAATACCAAATCTCTCAACCAGAAGTGTACGT...TCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR GCA 90 bp GGCTATCTCCAGGTAGTCTGGGGAAGCTGTAATCTCCTTTTCTCTTCCAGGCGCGCCTCCACCAAACTTTaGTCGCGAGTTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GYLQVVWGSCNLLFSSRRASTKL*SRVAKA
Trigger: AGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGC...GCGCCTGGAAGAGAAAAGGAGATTACAGCTTCCCCAGACTACCTGGAGATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGCGACGAGCCCGGGGTTaGGGGGAGCAACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKRRARG*GEQLQT
Trigger: CGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCG...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR GCA 90 bp GTGTTCTTCATTCGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGCGACGAGCCCGGGGTTaGGGGGAGCAACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: VFFIRHRMTVTTIQAIKKRRARG*GEQLQT
Trigger: CGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCG...CTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGAAGAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTACCGAGGCGCTGCCGCTaGTGCTGCAGTCACTTGAAT +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLPRRCR*CCSHLN
Trigger: ATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCTCGG...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR GCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGACAGAACTGTCAACCATaGAGAGTGAAAGGATATCCC +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRQNCQP*RVKGYP
Trigger: GGGATATCCTTTCACTCTGCATGGTTGACAGTTCTG...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCATTGTTGGGCCCCAAGTaGACCCCATCCTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: AWRRRVDKKTGDRQNFPPLLGPK*TPSLVQ
Trigger: TTGGACTAAGGATGGGGTGCACTTGGGGCCCAACAA...TGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR GCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCAAACTCCATCTCTACTaGTCCCAAAGGCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCKLHLY*SQRLLA
Trigger: AGCAAGAAGCCTTTGGGAGCAGTAGAGATGGAGTTT...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR GCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTTCAGCAGCCGCCACTTaGCATAGGGGTGCAACATCT +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPSAAAT*HRGATS
Trigger: AGATGTTGCACCCCTATGGCAAGTGGCGGCTGCTGA...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR GCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTAGGTCACTGGTTTGTTaGCCTTTCTCCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSRSLVC*PFSLTG
Trigger: GCCTGTGAGGGAGAAAGGGCAACAAACCAGTGACCT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CCA 90 bp TCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCTCCCCGCGCCCCGCGTaGGTCGGGATGGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SNDFLVMEVKGPQHSPFSSPRPA*VGMEKA
Trigger: CGCTTTCTCCATCCCGACCCACGCGGGGCGCGGGGA...GGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATTCCCCGCGCCCCGCGTaGGTCGGGATGGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYSPRPA*VGMEKA
Trigger: CGCTTTCTCCATCCCGACCCACGCGGGGCGCGGGGA...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VCYSTSVPFSPAQLTFSEAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...CTCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCACCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAPSFLC*SSMVLS
Trigger: AGAGAGCACCATACTGGACCAACACAGAAAAGATGG...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCCTCCTCCGACCACTGTaGAGGCATTTGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLSCLGTGRHSHSCFNTALLRPL*RHLPAV
Trigger: GACTGCCGGCAAATGCCTCCACAGTGGTCGGAGGAG...GGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTATCTCCAGGTAGTCTaGGGAAGCTGTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCYLQVV*GSCNLL
Trigger: AAGGAGATTACAGCTTCCCCAGACTACCTGGAGATA...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCAGTTCATGGAGGAGCTaGACTCAGCCGAAACCTGTC +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSSSWRS*TQPKPV
Trigger: GACAGGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356226.8
CDS-3UTR CCA 90 bp CTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSQCCPVWGQADTVIHVSPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...AACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWRPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGACTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRLEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLLEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSSCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHTAVYV*ILRKAW
Trigger: CCATGCCTTCCTCAGTATCCACACATAAACGGCAGT...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCACCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAPSFLC*SSMVLL
Trigger: AAGGAGCACCATACTGGACCAACACAGAAAAGATGG...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356226.8
ENST00000604236.5
CDS-3UTR TCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTATCCTCAACTAAACTaGAGGAGGGCCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLYPQLN*RRAGPG
Trigger: CCCTGGCCCGGCCCTCCTTCAGTTTAGTTGAGGATA...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCATCATCTCCGGATaGGATGGCATCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TQHGAEESTRRQVTGRTSLIISG*DGIFWL
Trigger: GAGCCAGAAGATGCCATCTCATCCGGAGATGATGAG...GGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611527.1
CDS-3UTR TCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCCYCSH*QNLPHH
Trigger: ATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACA...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCGTCAACCATGCAGAGTaGAAGGATATCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLVNHAE*KDIPIE
Trigger: TTCTATTGGGATATCCTTTCACTCTGCATGGTTGAC...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGACCCCTATGCAGGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: RHRMTVTTIQAIKKTPMQGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...CTGCATAGGGGTCTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCAGCTGGTAGGTGCATaGCACCAAGTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLQLVGA*HQVLEG
Trigger: ACCTTCAAGGACTTGGTGTCATGCACCTACCAGCTG...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTGCTGCTAAATCTCGATaGATACATTTTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSAAKSR*IHFWEA
Trigger: GGCTTCCCAAAAATGTATTCATCGAGATTTAGCAGC...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCGCTGCTAAATCTCGATaGATACATTTTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLAAKSR*IHFWEA
Trigger: GGCTTCCCAAAAATGTATTCATCGAGATTTAGCAGC...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTACTTCTCCCCAGCACTaGGTAGGAGCGGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTTSPQH*VGAGAV
Trigger: GACAGCTCCCGCTCCTACTCAGTGCTGGGGAGAAGT...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS-3UTR TCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTGGCTGGATCTTTTGGTaGGGTCCTGCCAGAATTAGA +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSGWIFW*GPARIR
Trigger: TCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCC...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTT +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGETYTSG*EIWYLV
Trigger: AACCAAATACCAAATCTCTCAACCAGAAGTGTACGT...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR GCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWMTPAG*PRIWGT
Trigger: CGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCAT...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAAATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKEMTPAG*PRIWGT
Trigger: CGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCAT...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR GCA 90 bp CCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGCGACGAGCCCGGGGTTaGGGGGAGCAACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: PGTDTELVPSNDFLVMEVRRARG*GEQLQT
Trigger: CGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCG...CACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCGACGAGCCCGGGGTTaGGGGGAGCAACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMRRARG*GEQLQT
Trigger: CGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCAGGCGCTGCCGCTGCTaGTGCAGTCACTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVRRCRC*CSHLNG
Trigger: GCCATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCT...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTGTTGGTCCAGTATGGTaGTCTCTTGTTGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSVGPVW*SLVVTV
Trigger: AACAGTAACAACAAGAGAGCACCATACTGGACCAAC...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTCACTGTGGAGGCATTTaGCGGCAGTCCGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTHCGGI*RQSGLE
Trigger: CTCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTG...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTCCGTTCTTTTCCACGTaGTTGATCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GERGYMVACGSPLLQKPSPFFST*LIHWMW
Trigger: CCACATCCAGTGGATCAAGCACGTGGAAAAGAACGG...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVRLVSL*TAGWLL
Trigger: CAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACG...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTCGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPRLVSL*TAGWLL
Trigger: CAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACG...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACAAGTCTTCTACCAACTaGTTGAACGTTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHKSSTN*LNVGLW
Trigger: CCAGAGACCAACGTTCAAGCAGTTGGTAGAAGACTT...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCAGTGGCGCCCTTTATCTaGAAGTACTCCCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: AWRRRVDKKTGDRQNFPPVAPFI*KYSPIS
Trigger: GCTTATTGGGGAGTACTTGCAGATAAAGGGCGCCAC...TGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLPNAEE*SLGLRR
Trigger: CCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTAAAACCAAAGGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTACCGCGTGGGTCGGGATaGAGAAAGCGACGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LKPKVCYSTSVPFSPAQLPRGSG*RKRRAR
Trigger: CCGGGCTCGTCGCTTTCTCCATCCCGACCCACGCGG...TAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACCTTTGGTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGATGTGTTGGTCCAGTATaGTGCTCTCTTGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRCVGPV*CSLVVT
Trigger: AGTAACAACAAGAGAGCACCATACTGGACCAACACA...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp CTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LGSQCCPVWGQADTVIHVAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...AACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCTCCTCCGACCACTGTaGAGGCATTTGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVLLRPL*RHLPAV
Trigger: GACTGCCGGCAAATGCCTCCACAGTGGTCGGAGGAG...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVRPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTTGGAAACTCCCATTTTaGGTCCTCTGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSWKLPF*VLWKFI
Trigger: TATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCA...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCTGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCGAAGCCGCCCATTGGTaGTCTTTTTGTAATAGTCTA +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCEAAHW*SFCNSL
Trigger: TAGACTATTACAAAAAGACCACCAATGGGCGGCTTC...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGAAGCCGCCCATTGGTaGTCTTTTTGTAATAGTCTA +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAEAAHW*SFCNSL
Trigger: TAGACTATTACAAAAAGACCACCAATGGGCGGCTTC...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGCTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGELLRGR*YHLSWE
Trigger: TTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAG...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGCCACGTACACTTCTaGTTGAGAGATTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGESHVHF*LRDLVF
Trigger: AAATACCAAATCTCTCAACCAGAAGTGTACGTGGCT...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CCA 90 bp GGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGAGCCACGTACACTTCTaGTTGAGAGATTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: GPRDTAWRRRVDKKTGDRSHVHF*LRDLVF
Trigger: AAATACCAAATCTCTCAACCAGAAGTGTACGTGGCT...CCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR CCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
3UTR CAA 72 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAGCCAGTACGCACGGCA +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTST*SPTGPQPVRTA
Trigger: TGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.1
CDS-3UTR TCA 90 bp TCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGCTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SDISYHVHFTQMTLGNHELGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...CTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGGAGGATGGGCCGGTaGGGCGATCGCTCCACAACA +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVWRMGR*GDRSTT
Trigger: TGTTGTGGAGCGATCGCCTCACCGGCCCATCCTCCA...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSRHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGCTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTGCGAGCCCCCTAAAGTaGAGATCTCCCACATTAACA +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPASPLK*RSPTLT
Trigger: TGTTAATGTGGGAGATCTTCACTTTAGGGGGCTCGC...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVASTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 4 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGACCTGCCAGAATTAGATaGAAGCAATCCCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRPARIR*KQSLKK
Trigger: CTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGG...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCTGCCAGAATTAGATaGAAGCAATCCCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSPARIR*KQSLKK
Trigger: CTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGG...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTT +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVATYTSG*EIWYLV
Trigger: AACCAAATACCAAATCTCTCAACCAGAAGTGTACGT...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTGTCAGGGTAACTAGGTaGATACTGTTCGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSVRVTR*ILFERL
Trigger: CAACCTCTCGAACAGTATTCACCTAGTTACCCTGAC...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTACTTTGCTCGCGAGTTaGGAAGGCTCAGAGCGCGCA +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPTLLAS*EGSERA
Trigger: TGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGGCCTCCACCAAACTTTaGTCGCGAGTTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLASTKL*SRVAKA
Trigger: AGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGC...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: SNDFLVMEVKGPQHSPFSMTPAG*PRIWGT
Trigger: CGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCAT...GGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYMTPAG*PRIWGT
Trigger: CGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCAT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTCGCTGCCGCTGCTGCTaGAGTCACTTGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPRCRCC*SHLNGN
Trigger: GTTGCCATTCAAGTGACTGCAGCAGCAGCGGCAGCG...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCAGGCGCTGCCGCTGCTaGTGCAGTCACTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESRRCRC*CSHLNG
Trigger: GCCATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCT...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCCGAGGCGCTGCCGCTaGTGCTGCAGTCACTTGAAT +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTPRRCR*CCSHLN
Trigger: ATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCTCGG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTGTTCTTCATTCGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGCCGAGGCGCTGCCGCTaGTGCTGCAGTCACTTGAAT +
Preference number: 4 (lower is better)
Translates to: VFFIRHRMTVTTIQAIKKPRRCR*CCSHLN
Trigger: ATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCTCGG...CTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGAAGAACAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCTTAAGAAGACCCCTATaGAGTAAATGGCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLLRRPL*SKWLSP
Trigger: TGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAA...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGATTAAGAAGACCCCTATaGAGTAAATGGCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRLRRPL*SKWLSP
Trigger: TGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAA...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGCGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKRLVSL*TAGWLL
Trigger: CAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACG...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: GERGYMVACGSPLLQKPSFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTA +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRKISVI*IHLARL
Trigger: TAGCCGTGCAAGATGAATGCAGATTACACTGATCTT...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTCCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPPNAEE*SLGLRR
Trigger: CCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGG...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCCGCGTGGGTCGGGATaGAGAAAGCGACGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLPRGSG*RKRRAR
Trigger: CCGGGCTCGTCGCTTTCTCCATCCCGACCCACGCGG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAAGGCAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACATTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: ERQGPRDTAWRRRVDKKTFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...TGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611527.1
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTTTTCAGCCACCGCATaGTTGGCATTGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLFSATA*LALGSP
Trigger: GGGGGAACCCAATGCCAACCATGCGGTGGCTGAAAA...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPSPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTGGAAACTCCCATTTTaGGTCCTCTGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHWKLPF*VLWKFI
Trigger: TATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQVLHPG*PPGSEV
Trigger: TACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTAC...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTATCAAACAGGGCTTCTaGAGCCATCCACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPIKQGF*SHPLDW
Trigger: CCAGTCAAGTGGATGGCTCCAGAAGCCCTGTTTGAT...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTTGGTACCATTTATCTTaGGAAGTCCAGTTAGACGTT +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSWYHLS*EVQLDV
Trigger: AACGTCTAACTGGACTTCCCAAGATAAATGGTACCA...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAACGCCAAAGAGTCTaGAAGCCATTATCAAAATTC +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLQRQRV*KPLSKF
Trigger: GAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTG...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTTGTCTACAGTCCTACTaGCAGTACAAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSCLQSY*QYKHRG
Trigger: GCCTCTATGCTTGTACTGCCAGTAGGACTGTAGACA...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CCA 90 bp GCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCATGTCTACAGTCCTACTaGCAGTACAAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: AWRRRVDKKTGDRQNFPPCLQSY*QYKHRG
Trigger: GCCTCTATGCTTGTACTGCCAGTAGGACTGTAGACA...TGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR CCA 90 bp GGCTATCTCCAGGTAGTCTGGGGAAGCTGTAATCTCCTTTTCTCTTCCAGGCGCATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: GYLQVVWGSCNLLFSSRRILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...GCGCCTGGAAGAGAAAAGGAGATTACAGCTTCCCCAGACTACCTGGAGATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGCCAAAGGCTTCTTGCTaGGGTCAGTTCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWPKASC*GQFCGR
Trigger: TCTCCCGCAGAACTGACCCCAGCAAGAAGCCTTTGG...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR TCA 90 bp CGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: RDTAWRRRVDKKTGDRQNCYCSH*QNLPHH
Trigger: ATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACA...GTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR TCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATCTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KILTGVSNAKESGSHYQNLGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCACAGCCGGCTGGCTGCTaGAGTCTGGCTTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPQPAGC*SLASWS
Trigger: CGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTG...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLRHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: VRTAGERGYMVACGSPLLNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGAGTACGCACGGCAGGTaGGAGGGGTTACATGGTGGC +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKSTHGR*EGLHGG
Trigger: GCCACCATGTAACCCCTCTCACCTGCCGTGCGTACT...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVASVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTACTTTGCTCGCGAGTTaGGAAGGCTCAGAGCGCGCA +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTTLLAS*EGSERA
Trigger: TGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGT...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCGACGAGCCCGGGGTTaGGGGGAGCAACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYRRARG*GEQLQT
Trigger: CGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCGCTGCCGCTGCTGCTaGAGTCACTTGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTRCRCC*SHLNGN
Trigger: GTTGCCATTCAAGTGACTGCAGCAGCAGCGGCAGCG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGTDTELVPSNDFLVMEVMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...CACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp GGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: GLLQHICTLFTCPINIFRGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...TCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTCACTGTGGAGGCATTTaGCGGCAGTCCGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCHCGGI*RQSGLE
Trigger: CTCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTG...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGCGGGCCCGTATTTACTaGCGTTCTTTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWRARIY*RSFPRA
Trigger: AGCACGTGGAAAAGAACGGCAGTAAATACGGGCCCG...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVRLVSL*TAGWLL
Trigger: CAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCGAGGCGCTGCCGCTaGTGCTGCAGTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSPRRCR*CCSHWC
Trigger: ACACCAGTGACTGCAGCAGCAGCGGCAGCGCCTCGG...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS-3UTR GCA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCACAGGCTTGGCACATaGTCGTTTTGTTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLHRLGT*SFCSFL
Trigger: GAGGAAAGAACAAAACGAGCATGTGCCAAGCCTGTG...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMQKSGP*VFAGAK
Trigger: CTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGGATCATGCAAAGCTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: YHVHFTQMTLGNHEDHAKLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...CTTTGCATGATCCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGGATCATGCAAAGTTTTCAGCCACCGCATaGTTGGCATTGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: YHVHFTQMTLGNHEDHAKFSATA*LALGSP
Trigger: GGGGGAACCCAATGCCAACCATGCGGTGGCTGAAAA...CTTTGCATGATCCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTTTTCAGCCACCGCATaGTTGGCATTGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPFSATA*LALGSP
Trigger: GGGGGAACCCAATGCCAACCATGCGGTGGCTGAAAA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCTCCTCCGACCACTGTaGAGGCATTTGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKLLRPL*RHLPAV
Trigger: GACTGCCGGCAAATGCCTCCACAGTGGTCGGAGGAG...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAACTCCTCCGACCACTGTaGAGGCATTTGCCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKELLRPL*RHLPAV
Trigger: GACTGCCGGCAAATGCCTCCACAGTGGTCGGAGGAG...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTTCTCTTCCAGGCGCTaGCAGAACTGTCAACCATGC +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLFSSRR*QNCQPC
Trigger: GCATGGTTGACAGTTCTGCCAGCGCCTGGAAGAGAA...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGSPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKSPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAAAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKERPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMRPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGTTACCAAAACATTTCTaGCTGCTAAATCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGELPKHF*LLNLDE
Trigger: TTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAA...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSLEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSSCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTCACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCATGCTCCTCTCTCGGAGAGATTTGGTATTTaGTTGGTGGCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ESTRRQVTGRTSLHAPLSERFGI*LVALLA
Trigger: AGCCAGAAGAGCCACCAACCAAATACCAAATCTCTC...CGAGAGAGGAGCATGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR CCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTAGGCGCTTGCTGTTTTaGCAGGACAGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGRRLLF*QDSEPG
Trigger: GCCTGGCTCACTGTCCTGCCAAAACAGCAAGCGCCT...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369059.5
CDS-3UTR CCA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTCCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GERGYMVACGSPLLQKPSPSFLC*SSMVLL
Trigger: AAGGAGCACCATACTGGACCAACACAGAAAAGATGG...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356226.8
ENST00000604236.5
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYLGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAACTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LIGCESENSIQVFYQLLELGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp CTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCAGCCAGCCTCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: LSCDGSEGPSTFTFFQPASRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...GGCTGGCTGGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCCACTGCTTCCGCCATaGCCACTTGCCCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKPLLPP*PLAQSN
Trigger: GTTGCTTTGGGCAAGTGGTCATGGCGGAAGCAGTGG...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCCACTGCTTCCGCCATaGCCACTTGCCCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMPLLPP*PLAQSN
Trigger: GTTGCTTTGGGCAAGTGGTCATGGCGGAAGCAGTGG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGCCACTGCTTCCGCCATaGCCACTTGCCCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWPLLPP*PLAQSN
Trigger: GTTGCTTTGGGCAAGTGGTCATGGCGGAAGCAGTGG...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCAGCTGGTAGGTGCATaGCACCAAGTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVQLVGA*HQVLEG
Trigger: ACCTTCAAGGACTTGGTGTCATGCACCTACCAGCTG...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTCAGCTGGTAGGTGCATaGCACCAAGTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPQLVGA*HQVLEG
Trigger: ACCTTCAAGGACTTGGTGTCATGCACCTACCAGCTG...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTCTTCTACCAACTGCTTaGACGTTGGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTLLPTA*TLVSGR
Trigger: CCTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAG...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: EGRTHVHLESYWSTASTHSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTTGGAGGATGGGCCGGTaGGGCGATCGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVWRMGR*GDRSFL
Trigger: GAGGAAAGAGCGATCGCCTCACCGGCCCATCCTCCA...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR GCA 90 bp GGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAACTTTGCTCGCGAGTTaGGAAGGCTCAGAGCGCGCA +
Preference number: 4 (lower is better)
Translates to: GLLQHICTLFTCPINIFRTLLAS*EGSERA
Trigger: TGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGT...TCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp GTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGCGCTGCCGCTGCTGCTaGAGTCACTTGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: VCYSTSVPFSPAQLTFSERCRCC*SHLNGN
Trigger: GTTGCCATTCAAGTGACTGCAGCAGCAGCGGCAGCG...CTCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp AAAGGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCCCGAGGCGCTGCCGCTaGTGCTGCAGTCACTTGAAT +
Preference number: 4 (lower is better)
Translates to: KGLLQHICTLFTCPINIFPRRCR*CCSHLN
Trigger: ATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCTCGG...GAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: MPGTDTELVPSNDFLVMEAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAAATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LIGCESENSIQVFYQLLEMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCACTGTGGAGGCATTTaGCGGCAGTCCGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYHCGGI*RQSGLE
Trigger: CTCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCCGTTCTTTTCCACGTaGTTGATCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLPFFST*LIHWMW
Trigger: CCACATCCAGTGGATCAAGCACGTGGAAAAGAACGG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCGGGCCCGTATTTACTaGCGTTCTTTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVRARIY*RSFPRA
Trigger: AGCACGTGGAAAAGAACGGCAGTAAATACGGGCCCG...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGAAGCAGAAGGCCAGCTaGCAGAGAGAAGCACATTCT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLKQKAS*QREAHS
Trigger: AGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTT...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCAGCCAGCCGTGGCGCCCTTTATCTaGAAGTACTCCCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: LSCDGSEGPSTFTFFQPAVAPFI*KYSPIS
Trigger: GCTTATTGGGGAGTACTTGCAGATAAAGGGCGCCAC...GGCTGGCTGGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAGAAAGGACTCAGGCTTaGCGTTGCCTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPERTQA*RCLHQT
Trigger: AGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTC...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYQKSGP*VFAGAK
Trigger: CTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAACAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: MPGTDTELVPSNDFLVMEQKSGP*VFAGAK
Trigger: CTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTG...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGCTGCAGTCACTTGAATaGCAACGCTCCTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWLQSLE*QRSSAT
Trigger: GGTCGCGGAGGAGCGTTGCCATTCAAGTGACTGCAG...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCTGCAGTCACTTGAATaGCAACGCTCCTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: TDTELVPSNDFLVMEVKGLQSLE*QRSSAT
Trigger: GGTCGCGGAGGAGCGTTGCCATTCAAGTGACTGCAG...GCCCTTCACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCTGTGTTGGTCCAGTATaGTGCTCTCTTGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSCVGPV*CSLVVT
Trigger: AGTAACAACAAGAGAGCACCATACTGGACCAACACA...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTTTTTCAGCCACCGCATaGTTGGCATTGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTFSATA*LALGSP
Trigger: GGGGGAACCCAATGCCAACCATGCGGTGGCTGAAAA...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp CTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTCCCCTATGCAGTAAATaGCTATCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: LGSQCCPVWGQADTVIHVPLCSK*LSPGSL
Trigger: CAGACTACCTGGAGATAGCCATTTACTGCATAGGGG...AACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWGCWSS*RSWTQP
Trigger: CGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCC...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KILTGVSNAKESGSHYQNSPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGACCCCTATGCAGCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: RHRMTVTTIQAIKKTPMQPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...CTGCATAGGGGTCTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFVLHPG*PPGSEV
Trigger: TACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTAC...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGTACTCCATCCCGGGTaGCCTCCGGGCTCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGVLHPG*PPGSEV
Trigger: TACCTCCGAGCCCGGAGGCCACCCGGGATGGAGTAC...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTTTACCAAAACATTTCTaGCTGCTAAATCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: PQPVRTAGERGYMVACGSLPKHF*LLNLDE
Trigger: TTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAA...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTGAAGCCGCCCATTGGTaGTCTTTTTGTAATAGTCTA +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSEAAHW*SFCNSL
Trigger: TAGACTATTACAAAAAGACCACCAATGGGCGGCTTC...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKSHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: LKILTGVSNAKESGSHYQHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
3UTR CAA 72 bp CTGCTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGTCATTCATGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LLSVARFPVLSC*GTGRHSHSCFN
Trigger: GTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604236.5
ENST00000638709.1
CDS-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLLGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVSRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCATCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPSRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCTCATTCGGCACAGGATaGCTGTTACCACCATACAGG +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVSFGTG*LLPPYR
Trigger: CCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGA...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCATCATTCGGCACAGGATaGCTGTTACCACCATACAGG +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSSFGTG*LLPPYR
Trigger: CCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGA...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCATTCGGCACAGGATaGCTGTTACCACCATACAGG +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVSFGTG*LLPPYR
Trigger: CCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTCATTCGGCACAGGATaGCTGTTACCACCATACAGG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPSFGTG*LLPPYR
Trigger: CCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTCAGCTGGTAGGTGCATaGCACCAAGTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTQLVGA*HQVLEG
Trigger: ACCTTCAAGGACTTGGTGTCATGCACCTACCAGCTG...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCCAGCTGGTAGGTGCATaGCACCAAGTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESQLVGA*HQVLEG
Trigger: ACCTTCAAGGACTTGGTGTCATGCACCTACCAGCTG...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGCTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCTGGAGCCATCCACTTaGCTGGAAGCCGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLLEPST*LEAAHW
Trigger: CCAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCTTCTACCAACTGCTTaGACGTTGGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTLLPTA*TLVSGR
Trigger: CCTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATAACGCACGTCCACCTTaGGTCCTACTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYNARPP*VLLVHS
Trigger: GCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGGCTGGATCTTTTGGTaGGGTCCTGCCAGAATTAGA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVGWIFW*GPARIR
Trigger: TCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCTCATCATCTCCGGATaGGATGGCATCTGTGACATT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLLIISG*DGICDI
Trigger: AATGTCACAGATGCCATCTCATCCGGAGATGATGAG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR TCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGGTCAGGGTAACTAGGTaGATACTGTTCGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLVRVTR*ILFERL
Trigger: CAACCTCTCGAACAGTATTCACCTAGTTACCCTGAC...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCCGCCTCGGTCACATTaGACAGAGCCAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYPPRSH*TEPALL
Trigger: CAGAAGTGCTGGCTCTGTTCAATGTGACCGAGGCGG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369059.5
ENST00000604236.5
CDS-3UTR GCA 90 bp TTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCAGCCTCCACCAAACTTTaGTCGCGAGTTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LVPSNDFLVMEVKGPQHSASTKL*SRVAKA
Trigger: AGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGC...TGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGACGGTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAAGCCTCCACCAAACTTTaGTCGCGAGTTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKEASTKL*SRVAKA
Trigger: AGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGC...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR GCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTACTCAGGCTTGGCGTTaGCTCCACCAAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGTQAWR*LHQTLL
Trigger: GAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGT...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCGACGAGCCCGGGGTTaGGGGGAGCAACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALRRARG*GEQLQT
Trigger: CGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTCGACGAGCCCGGGGTTaGGGGGAGCAACTCCAAACG +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFRRARG*GEQLQT
Trigger: CGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCG...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR GCA 90 bp GTAATCTCAGCTTCCAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGAGGCGCTGCCGCTGCTaGTGCAGTCACTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: VISASKMSDISYHVHFTQRRCRC*CSHLNG
Trigger: GCCATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCT...CTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTGGAAGCTGAGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCGTTGGTCCAGTATGGTaGTCTCTTGTTGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLVGPVW*SLVVTV
Trigger: AACAGTAACAACAAGAGAGCACCATACTGGACCAAC...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCACTGTGGAGGCATTTaGCGGCAGTCCGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYHCGGI*RQSGLE
Trigger: CTCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGGGCCCGTATTTACTaGCGTTCTTTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGRARIY*RSFPRA
Trigger: AGCACGTGGAAAAGAACGGCAGTAAATACGGGCCCG...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCGGGCCCGTATTTACTaGCGTTCTTTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTRARIY*RSFPRA
Trigger: AGCACGTGGAAAAGAACGGCAGTAAATACGGGCCCG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTTTAAGAAGACCCCTATaGAGTAAATGGCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSLRRPL*SKWLSP
Trigger: TGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAA...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLSLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTTTGTTGGGCCCCAAGTaGACCCCATCCTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTLLGPK*TPSLVQ
Trigger: TTGGACTAAGGATGGGGTGCACTTGGGGCCCAACAA...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR GCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAGTGGCGCCCTTTATCTaGAAGTACTCCCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSVAPFI*KYSPIS
Trigger: GCTTATTGGGGAGTACTTGCAGATAAAGGGCGCCAC...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGACTCTCGGAAGTCTTaGAGAATCGGCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYDSRKS*RIGWGS
Trigger: GGAGCCCCAGCCGATTCTGCAAGACTTCCGAGAGTC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CCA 90 bp TCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGGAAAGGACTCAGGCTTaGCGTTGCCTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: SDISYHVHFTQMTLGNHEERTQA*RCLHQT
Trigger: AGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTC...CTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp CAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAACCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: QNVRHFIPRPLYTDDAWEPNAEE*SLGLRR
Trigger: CCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGG...TTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAACTGCAGTCACTTGAATaGCAACGCTCCTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: LIGCESENSIQVFYQLLELQSLE*QRSSAT
Trigger: GGTCGCGGAGGAGCGTTGCCATTCAAGTGACTGCAG...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFAFSLR*AQEPRR
Trigger: GCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGC...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: PGTDTELVPSNDFLVMEVAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...CACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAAGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKEAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTTCTCTTCCAGGCGCTaGCAGAACTGTCAACCATGC +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGFSSRR*QNCQPC
Trigger: GCATGGTTGACAGTTCTGCCAGCGCCTGGAAGAGAA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTGTTCTTCATTCGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGTTCTCTTCCAGGCGCTaGCAGAACTGTCAACCATGC +
Preference number: 4 (lower is better)
Translates to: VFFIRHRMTVTTIQAIKKFSSRR*QNCQPC
Trigger: GCATGGTTGACAGTTCTGCCAGCGCCTGGAAGAGAA...CTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGAAGAACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp CGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGACCCCTATGCAGTATCTCCAGGTAGTCTaGGGAAGCTGTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RHRMTVTTIQAIKKTPMQYLQVV*GSCNLL
Trigger: AAGGAGATTACAGCTTCCCCAGACTACCTGGAGATA...CTGCATAGGGGTCTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTACCCCTATGCAGTAAATaGCTATCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLPLCSK*LSPGSL
Trigger: CAGACTACCTGGAGATAGCCATTTACTGCATAGGGG...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVGCWSS*RSWTQP
Trigger: CGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCC...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAATCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQSPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQRPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTGAAGCCGCCCATTGGTaGTCTTTTTGTAATAGTCTA +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPEAAHW*SFCNSL
Trigger: TAGACTATTACAAAAAGACCACCAATGGGCGGCTTC...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVSHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMSHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKSHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLSHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCATTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: KILTGVSNAKESGSHYQNVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCACACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWTAVYV*ILRKAW
Trigger: CCATGCCTTCCTCAGTATCCACACATAAACGGCAGT...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGGATCATGCAAAGAAAGCTCATAAACCCTaGCTGCCCACAACATCCAGG +
Preference number: 4 (lower is better)
Translates to: YHVHFTQMTLGNHEDHAKKAHKP*LPTTSR
Trigger: CCTGGATGTTGTGGGCAGCCAGGGTTTATGAGCTTT...CTTTGCATGATCCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGTATCCTCAACTAAACTaGAGGAGGGCCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQYPQLN*RRAGPG
Trigger: CCCTGGCCCGGCCCTCCTTCAGTTTAGTTGAGGATA...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp GTAATCTCAGCTTCCAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGTATCCTCAACTAAACTaGAGGAGGGCCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VISASKMSDISYHVHFTQYPQLN*RRAGPG
Trigger: CCCTGGCCCGGCCCTCCTTCAGTTTAGTTGAGGATA...CTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTGGAAGCTGAGATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAACTCATCATCTCCGGATaGGATGGCATCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKELIISG*DGIFWL
Trigger: GAGCCAGAAGATGCCATCTCATCCGGAGATGATGAG...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357555.9
ENST00000613048.4
CDS-3UTR TCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGACTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGLGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGGTGGTACGTGTGATTaGTGGACCCGTATTCATTCT +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVGGTCD*WTRIHS
Trigger: AGAATGAATACGGGTCCATCAATCACACGTACCACC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCAGCCGGCTGGCTGCTaGAGTCTGGCTTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALQPAGC*SLASWS
Trigger: CGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCCACTGCTTCCGCCATaGCCACTTGCCCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVPLLPP*PLAQSN
Trigger: GTTGCTTTGGGCAAGTGGTCATGGCGGAAGCAGTGG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCCACTGCTTCCGCCATaGCCACTTGCCCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYPLLPP*PLAQSN
Trigger: GTTGCTTTGGGCAAGTGGTCATGGCGGAAGCAGTGG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCCACTGCTTCCGCCATaGCCACTTGCCCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLPLLPP*PLAQSN
Trigger: GTTGCTTTGGGCAAGTGGTCATGGCGGAAGCAGTGG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPRHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSRHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTCAGCTGGTAGGTGCATaGCACCAAGTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRQLVGA*HQVLEG
Trigger: ACCTTCAAGGACTTGGTGTCATGCACCTACCAGCTG...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCAGCTGGTAGGTGCATaGCACCAAGTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMQLVGA*HQVLEG
Trigger: ACCTTCAAGGACTTGGTGTCATGCACCTACCAGCTG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGGCGAGCCCCCTAAAGTaGAGATCTCCCACATTAACA +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKASPLK*RSPTLT
Trigger: TGTTAATGTGGGAGATCTTCACTTTAGGGGGCTCGC...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCGCGAGCCCCCTAAAGTaGAGATCTCCCACATTAACA +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESASPLK*RSPTLT
Trigger: TGTTAATGTGGGAGATCTTCACTTTAGGGGGCTCGC...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAACTTCTACCAACTGCTTaGACGTTGGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKELLPTA*TLVSGR
Trigger: CCTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAG...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGCTTCTACCAACTGCTTaGACGTTGGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWLLPTA*TLVSGR
Trigger: CCTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAG...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAACTTCTACCAACTGCTTaGACGTTGGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SCQREAHSAIISTKVCPQLLPTA*TLVSGR
Trigger: CCTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAG...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 4 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLLRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGGCTGGATCTTTTGGTaGGGTCCTGCCAGAATTAGA +
Preference number: 4 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTGWIFW*GPARIR
Trigger: TCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCC...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTT +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPTYTSG*EIWYLV
Trigger: AACCAAATACCAAATCTCTCAACCAGAAGTGTACGT...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGTCAGGGTAACTAGGTaGATACTGTTCGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVVRVTR*ILFERL
Trigger: CAACCTCTCGAACAGTATTCACCTAGTTACCCTGAC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTGTCAGGGTAACTAGGTaGATACTGTTCGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTVRVTR*ILFERL
Trigger: CAACCTCTCGAACAGTATTCACCTAGTTACCCTGAC...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAGTCAGGGTAACTAGGTaGATACTGTTCGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSVRVTR*ILFERL
Trigger: CAACCTCTCGAACAGTATTCACCTAGTTACCCTGAC...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGCCTCCACCAAACTTTaGTCGCGAGTTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYASTKL*SRVAKA
Trigger: AGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFMTPAG*PRIWGT
Trigger: CGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCAT...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCGCTGCCGCTGCTGCTaGAGTCACTTGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYRCRCC*SHLNGN
Trigger: GTTGCCATTCAAGTGACTGCAGCAGCAGCGGCAGCG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGACCGAGGCGCTGCCGCTaGTGCTGCAGTCACTTGAAT +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGPRRCR*CCSHLN
Trigger: ATTCAAGTGACTGCAGCAGCAGCGGCAGCGCCTCGG...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGAMPSA*GGLRNR
Trigger: TCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGC...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGACGTTAATCCCATCTaGACACTTCCTCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTDVNPI*TLPLRA
Trigger: TGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTCCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACCGTTCTTTTCCACGTaGTTGATCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LKILTGVSNAKESGSHYQPFFST*LIHWMW
Trigger: CCACATCCAGTGGATCAAGCACGTGGAAAAGAACGG...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTCGGGCCCGTATTTACTaGCGTTCTTTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRRARIY*RSFPRA
Trigger: AGCACGTGGAAAAGAACGGCAGTAAATACGGGCCCG...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAACGGGCCCGTATTTACTaGCGTTCTTTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKERARIY*RSFPRA
Trigger: AGCACGTGGAAAAGAACGGCAGTAAATACGGGCCCG...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCCGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTRLVSL*TAGWLL
Trigger: CAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACG...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGACGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGRLVSL*TAGWLL
Trigger: CAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACG...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCATTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCATTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPSLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACATCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 4 (lower is better)
Translates to: SQCCPVWGQADTVIHVLTSLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...TGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCTGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTTGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAATCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTTCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAAGCAGAAGGCCAGCTaGCAGAGAGAAGCACATTCT +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKKQKAS*QREAHS
Trigger: AGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTT...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTAAGCAGAAGGCCAGCTaGCAGAGAGAAGCACATTCT +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTKQKAS*QREAHS
Trigger: AGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTT...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGGAAAGGACTCAGGCTTaGCGTTGCCTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKERTQA*RCLHQT
Trigger: AGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTC...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCATTCTCTTCCAGGCGCTaGCAGAACTGTCAACCATGC +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPFSSRR*QNCQPC
Trigger: GCATGGTTGACAGTTCTGCCAGCGCCTGGAAGAGAA...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTATCTCCAGGTAGTCTaGGGAAGCTGTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLYLQVV*GSCNLL
Trigger: AAGGAGATTACAGCTTCCCCAGACTACCTGGAGATA...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSGCWSS*RSWTQP
Trigger: CGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCC...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSESPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSSPAGC*SSWRSW
Trigger: CCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGA...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAAGACCCCTGCCAGCATaGGGGTGTCTGCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGRPLPA*GCLPLK
Trigger: CTTCAACGGCAGACACCCCCATGCTGGCAGGGGTCT...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLLEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAAAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LIGCESENSIQVFYQLLESHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTATCAAACAGGGCTTCTaGAGCCATCCACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGIKQGF*SHPLDW
Trigger: CCAGTCAAGTGGATGGCTCCAGAAGCCCTGTTTGAT...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTCCTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FLIGCESENSIQVFYQLLRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...AAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPTAVYV*ILRKAW
Trigger: CCATGCCTTCCTCAGTATCCACACATAAACGGCAGT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCCAGCACTTCTGCATTaGAACTATTTATCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLPALLH*NYLSPS
Trigger: ACTCGGGGATAAATAGTTCCAATGCAGAAGTGCTGG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369059.5
ENST00000604236.5
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTGAGAGCGTTCATGCCTaGGAGTCACGTCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSESVHA*ESRQSL
Trigger: GAGGCTCTGACGTGACTCCCAGGCATGAACGCTCTC...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR TCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGTATCCTCAACTAAACTaGAGGAGGGCCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRYPQLN*RRAGPG
Trigger: CCCTGGCCCGGCCCTCCTTCAGTTTAGTTGAGGATA...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCTGGGCAGCGAAACTTaGCAGTGTTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALLGSET*QCWPQA
Trigger: TGCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAGGTGGTACGTGTGATTaGTGGACCCGTATTCATTCT +
Preference number: 4 (lower is better)
Translates to: LKILTGVSNAKESGSHYQGGTCD*WTRIHS
Trigger: AGAATGAATACGGGTCCATCAATCACACGTACCACC...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCGGTGGTACGTGTGATTaGTGGACCCGTATTCATTCT +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESGGTCD*WTRIHS
Trigger: AGAATGAATACGGGTCCATCAATCACACGTACCACC...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAATCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKESRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTGGAGGATGGGCCGGTaGGGCGATCGCTCCACAACA +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFWRMGR*GDRSTT
Trigger: TGTTGTGGAGCGATCGCCTCACCGGCCCATCCTCCA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000613048.4
CDS-3UTR TCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCATTCGGCACAGGATaGCTGTTACCACCATACAGG +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVSFGTG*LLPPYR
Trigger: CCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGA...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAATCATTCGGCACAGGATaGCTGTTACCACCATACAGG +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKESFGTG*LLPPYR
Trigger: CCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGA...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTCAGCCGGCTGGCTGCTaGAGTCTGGCTTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFQPAGC*SLASWS
Trigger: CGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTG...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCAGCTGGTAGGTGCATaGCACCAAGTCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYQLVGA*HQVLEG
Trigger: ACCTTCAAGGACTTGGTGTCATGCACCTACCAGCTG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAGCTGCTAAATCTCGATaGATACATTTTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLAAKSR*IHFWEA
Trigger: GGCTTCCCAAAAATGTATTCATCGAGATTTAGCAGC...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGCGAGCCCCCTAAAGTaGAGATCTCCCACATTAACA +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMASPLK*RSPTLT
Trigger: TGTTAATGTGGGAGATCTTCACTTTAGGGGGCTCGC...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTGCGAGCCCCCTAAAGTaGAGATCTCCCACATTAACA +
Preference number: 4 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCASPLK*RSPTLT
Trigger: TGTTAATGTGGGAGATCTTCACTTTAGGGGGCTCGC...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCTTCTACCAACTGCTTaGACGTTGGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYLLPTA*TLVSGR
Trigger: CCTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGGGCTGGATCTTTTGGTaGGGTCCTGCCAGAATTAGA +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKGWIFW*GPARIR
Trigger: TCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCC...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAGGCTGGATCTTTTGGTaGGGTCCTGCCAGAATTAGA +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPGWIFW*GPARIR
Trigger: TCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCC...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGGACGCTTGGGAACCATaGGGATCATGCAAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PGTDTELVPSNDFLVMEVDAWEP*GSCKAH
Trigger: ATGAGCTTTGCATGATCCTCATGGTTCCCAAGCGTC...CACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp GGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGATCCACTTTACACAGATaGCGCTTGGGAACCATGAGG +
Preference number: 4 (lower is better)
Translates to: GLLQHICTLFTCPINIFRSTLHR*RLGTMR
Trigger: CCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGA...TCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCTTTGCAGAGAGAGTaGAGTCTTCTCAATCAGCGA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVSLQRE*SLLNQR
Trigger: TCGCTGATTGAGAAGACTTCACTCTCTCTGCAAAGA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGGCCTCCACCAAACTTTaGTCGCGAGTTGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLASTKL*SRVAKA
Trigger: AGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGC...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAAACTCAGGCTTGGCGTTaGCTCCACCAAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QNVRHFIPRPLYTDDAWETQAWR*LHQTLL
Trigger: GAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGT...TTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATACTCAGGCTTGGCGTTaGCTCCACCAAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYTQAWR*LHQTLL
Trigger: GAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCCGCTGCCGCTGCTGCTaGAGTCACTTGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTRCRCC*SHLNGN
Trigger: GTTGCCATTCAAGTGACTGCAGCAGCAGCGGCAGCG...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFMDYAQ*LQPAVG
Trigger: GCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCAT...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp CCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGGACGTTAATCCCATCTaGACACTTCCTCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: PGTDTELVPSNDFLVMEVDVNPI*TLPLRA
Trigger: TGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC...CACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATGACGTTAATCCCATCTaGACACTTCCTCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: KILTGVSNAKESGSHYQNDVNPI*TLPLRA
Trigger: TGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACCGTTCTTTTCCACGTaGTTGATCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVPFFST*LIHWMW
Trigger: CCACATCCAGTGGATCAAGCACGTGGAAAAGAACGG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCACAGAACTGTCAACCATaGAGAGTGAAAGGATATCCC +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSQNCQP*RVKGYP
Trigger: GGGATATCCTTTCACTCTGCATGGTTGACAGTTCTG...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTSPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTAAGCAGAAGGCCAGCTaGCAGAGAGAAGCACATTCT +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLKQKAS*QREAHS
Trigger: AGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTT...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCATCTTGCACGGCTATTaGAAAGTGAGTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVILHGY*KVSGCF
Trigger: GAAACACCCACTCACTTTGCAATAGCCGTGCAAGAT...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTTTGTTGGGCCCCAAGTaGACCCCATCCTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVLLGPK*TPSLVQ
Trigger: TTGGACTAAGGATGGGGTGCACTTGGGGCCCAACAA...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR GCA 90 bp AAAGGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCTTGTTGGGCCCCAAGTaGACCCCATCCTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KGLLQHICTLFTCPINIFLLGPK*TPSLVQ
Trigger: TTGGACTAAGGATGGGGTGCACTTGGGGCCCAACAA...GAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALQKSGP*VFAGAK
Trigger: CTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTCAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFQKSGP*VFAGAK
Trigger: CTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTG...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCTTCCTCTACGGGCATaGACTACGCGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVLPLRA*TTRNAF
Trigger: GAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACATCTCCGGATGAGATaGCATCTTCTGGCTCTAATG +
Preference number: 4 (lower is better)
Translates to: LKILTGVSNAKESGSHYQHLRMR*HLLALM
Trigger: CATTAGAGCCAGAAGATGCCATCTCATCCGGAGATG...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357555.9
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPPSFLC*SSMVLS
Trigger: AGAGAGCACCATACTGGACCAACACAGAAAAGATGG...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTGCCGCAGGCACAGCATaGAGCCGCTTTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSAAGTA*SRFSIF
Trigger: AAAGATGGAAAAGCGGCTCCATGCTGTGCCTGCGGC...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFGCWSS*RSWTQP
Trigger: CGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCC...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATGGAAACTCCCATTTTaGGTCCTCTGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLWKLPF*VLWKFI
Trigger: TATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCA...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCACTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSLEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSESHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGATCAAACAGGGCTTCTaGAGCCATCCACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMIKQGF*SHPLDW
Trigger: CCAGTCAAGTGGATGGCTCCAGAAGCCCTGTTTGAT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGATCAAACAGGGCTTCTaGAGCCATCCACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWIKQGF*SHPLDW
Trigger: CCAGTCAAGTGGATGGCTCCAGAAGCCCTGTTTGAT...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTA +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESSSWRS*TQPKLL
Trigger: TAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYRGVTW*LVAVHC
Trigger: GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCACCTTGAGTCCTACTaGTCCACAGCCAGTACGCAC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYHLESY*STASTH
Trigger: GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCTGTCTACAGTCCTACTaGCAGTACAAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESCLQSY*QYKHRG
Trigger: GCCTCTATGCTTGTACTGCCAGTAGGACTGTAGACA...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTCCAGCACTTCTGCATTaGAACTATTTATCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPPALLH*NYLSPS
Trigger: ACTCGGGGATAAATAGTTCCAATGCAGAAGTGCTGG...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369059.5
ENST00000604236.5
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTGGTGTCTGCATAGCTaGGTTTCCTTCAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMWCLHS*VSFRGR
Trigger: TCTTCCCCTGAAGGAAACCCAGCTATGCAGACACCA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR TCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCTCATCATCTCCGGATaGGATGGCATCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSLIISG*DGIFWL
Trigger: GAGCCAGAAGATGCCATCTCATCCGGAGATGATGAG...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357555.9
ENST00000613048.4
CDS-3UTR TCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCATCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPSRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACAGCTGCTAAATCTCGATaGATACATTTTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SQCCPVWGQADTVIHVLTAAKSR*IHFWEA
Trigger: GGCTTCCCAAAAATGTATTCATCGAGATTTAGCAGC...TGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGCGAGCCCCCTAAAGTaGAGATCTCCCACATTAACA +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYASPLK*RSPTLT
Trigger: TGTTAATGTGGGAGATCTTCACTTTAGGGGGCTCGC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAACGGCTATTGCAAAGTaGGTGGGTGTTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVTAIAK*VGVSKA
Trigger: TGCTTTGGAAACACCCACTCACTTTGCAATAGCCGT...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAACGGCTATTGCAAAGTaGGTGGGTGTTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPTAIAK*VGVSKA
Trigger: TGCTTTGGAAACACCCACTCACTTTGCAATAGCCGT...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATCTCATCATCTCCGGATaGGATGGCATCTGTGACATT +
Preference number: 4 (lower is better)
Translates to: KILTGVSNAKESGSHYQNLIISG*DGICDI
Trigger: AATGTCACAGATGCCATCTCATCCGGAGATGATGAG...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR TCA 90 bp CCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGCTCATCATCTCCGGATaGGATGGCATCTGTGACATT +
Preference number: 4 (lower is better)
Translates to: PGTDTELVPSNDFLVMEVLIISG*DGICDI
Trigger: AATGTCACAGATGCCATCTCATCCGGAGATGATGAG...CACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGACTCAGGCTTGGCGTTaGCTCCACCAAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLTQAWR*LHQTLL
Trigger: GAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTGGCCAGGGACAAGGTTaGCATGGTGACCACGACCAG +
Preference number: 4 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFGQGQG*HGDHDQ
Trigger: CTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCC...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTATACTCGGAGACCCCTaGCAGCATGGGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFILGDP*QHGGVC
Trigger: GCAGACACCCCCATGCTGGCAGGGGTCTCCGAGTAT...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGACTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTCTTCTCCCAGGGGCTTaGCCAGTGTCAGCTTATCTC +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFLLPGA*PVSAYL
Trigger: GAGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAG...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: KILTGVSNAKESGSHYQNFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVSLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGATCTCTGGGAGGGCACTaGATGCCAACAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGSLGGH*MPTVPH
Trigger: ATGAGGGACTGTTGGCATGCAGTGCCCTCCCAGAGA...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTAGGCGCTGCCGCTGCTaGTGCAGTCACTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFRRCRC*CSHWCF
Trigger: AAAACACCAGTGACTGCAGCAGCAGCGGCAGCGCCT...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTTTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCATCTTGCACGGCTATTaGAAAGTGAGTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESILHGY*KVSGCF
Trigger: GAAACACCCACTCACTTTGCAATAGCCGTGCAAGAT...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTA +
Preference number: 4 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWKISVI*IHLARL
Trigger: TAGCCGTGCAAGATGAATGCAGATTACACTGATCTT...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAACTGGCCTTCTACAGTTaGCCTGTTGGGGAAATGATG +
Preference number: 4 (lower is better)
Translates to: MPGTDTELVPSNDFLVMELAFYS*PVGEMM
Trigger: CATCATTTCCCCAACAGGGCAACTGTAGAAGGCCAG...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCTGCAGTCACTTGAATaGCAACGCTCCTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALLQSLE*QRSSAT
Trigger: GGTCGCGGAGGAGCGTTGCCATTCAAGTGACTGCAG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCATTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCATTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTTTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGCATCTCCGGATGAGATaGCATCTTCTGGCTCTAATG +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWHLRMR*HLLALM
Trigger: CATTAGAGCCAGAAGATGCCATCTCATCCGGAGATG...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613048.4
CDS-3UTR CCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTTGTGTTGGTCCAGTATaGTGCTCTCTTGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTCVGPV*CSLVVT
Trigger: AGTAACAACAAGAGAGCACCATACTGGACCAACACA...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGPSFLC*SSMVLS
Trigger: AGAGAGCACCATACTGGACCAACACAGAAAAGATGG...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCCCCTATGCAGTAAATaGCTATCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMPLCSK*LSPGSL
Trigger: CAGACTACCTGGAGATAGCCATTTACTGCATAGGGG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGCCCCTATGCAGTAAATaGCTATCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWPLCSK*LSPGSL
Trigger: CAGACTACCTGGAGATAGCCATTTACTGCATAGGGG...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTGGAAACTCCCATTTTaGGTCCTCTGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVWKLPF*VLWKFI
Trigger: TATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCATGGAAACTCCCATTTTaGGTCCTCTGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPWKLPF*VLWKFI
Trigger: TATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCA...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTTTACCAAAACATTTCTaGCTGCTAAATCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPLPKHF*LLNLDE
Trigger: TTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAA...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGCTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKLEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: LKILTGVSNAKESGSHYQLEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGLEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTAGCCATCCACTTGACTaGAAGCCGCCCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFSHPLD*KPPIGG
Trigger: ACCACCAATGGGCGGCTTCCAGTCAAGTGGATGGCT...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTGTTCTTCATTCGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: VFFIRHRMTVTTIQAIKKSCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...CTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGAAGAACAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTA +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRSSWRS*TQPKLL
Trigger: TAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGAAGGGCTGTCTACAGTCCTACTaGCAGTACAAGCATAGAGGC +
Preference number: 4 (lower is better)
Translates to: TDTELVPSNDFLVMEVKGCLQSY*QYKHRG
Trigger: GCCTCTATGCTTGTACTGCCAGTAGGACTGTAGACA...GCCCTTCACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWTAVYV*ILRKAW
Trigger: CCATGCCTTCCTCAGTATCCACACATAAACGGCAGT...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SCQREAHSAIISTKVCPQTAVYV*ILRKAW
Trigger: CCATGCCTTCCTCAGTATCCACACATAAACGGCAGT...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAGGAGACAACAAGCTCTaGGAGGCATGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQGDNKL*EAWSPC
Trigger: GCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCC...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAACCTTTACTCTTCAGCTaGCCTTCTACAGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: MPGTDTELVPSNDFLVMEPLLFS*PSTVAL
Trigger: CAGGGCAACTGTAGAAGGCCAGCTGAAGAGTAAAGG...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCGTCAACCATGCAGAGTaGAAGGATATCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESVNHAE*KDIPIE
Trigger: TTCTATTGGGATATCCTTTCACTCTGCATGGTTGAC...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGTCAACCATGCAGAGTaGAAGGATATCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTVNHAE*KDIPIE
Trigger: TTCTATTGGGATATCCTTTCACTCTGCATGGTTGAC...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTGGGGGTGTCTGCCGTTaGAGAGAGGCGTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFGGVCR*REACCY
Trigger: ATAACAACACGCCTCTCTTCAACGGCAGACACCCCC...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPRHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYRHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGATGACACCAAGTCCTTaGAGGTCATCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSEMTPSP*RSSAPQ
Trigger: CTGAGGAGCAGATGACCTTCAAGGACTTGGTGTCAT...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGCTGCTAAATCTCGATaGATACATTTTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTAAKSR*IHFWEA
Trigger: GGCTTCCCAAAAATGTATTCATCGAGATTTAGCAGC...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGCTGCTAAATCTCGATaGATACATTTTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTAAKSR*IHFWEA
Trigger: GGCTTCCCAAAAATGTATTCATCGAGATTTAGCAGC...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGGCGAGCCCCCTAAAGTaGAGATCTCCCACATTAACA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLASPLK*RSPTLT
Trigger: TGTTAATGTGGGAGATCTTCACTTTAGGGGGCTCGC...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCCTTCTACCAACTGCTTaGACGTTGGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTLLPTA*TLVSGR
Trigger: CCTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAG...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 4 (lower is better)
Translates to: RPAAREKHILLSFQLRSVSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 4 (lower is better)
Translates to: QKQKASCQREAHSAIISTTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAACGGCTATTGCAAAGTaGGTGGGTGTTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQTAIAK*VGVSKA
Trigger: TGCTTTGGAAACACCCACTCACTTTGCAATAGCCGT...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAACGGCTATTGCAAAGTaGGTGGGTGTTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPTAIAK*VGVSKA
Trigger: TGCTTTGGAAACACCCACTCACTTTGCAATAGCCGT...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGTCAGGGTAACTAGGTaGATACTGTTCGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYVRVTR*ILFERL
Trigger: CAACCTCTCGAACAGTATTCACCTAGTTACCCTGAC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAAGTCAGGGTAACTAGGTaGATACTGTTCGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LIGCESENSIQVFYQLLEVRVTR*ILFERL
Trigger: CAACCTCTCGAACAGTATTCACCTAGTTACCCTGAC...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCGTTGGTCCAGTATGGTaGTCTCTTGTTGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESVGPVW*SLVVTV
Trigger: AACAGTAACAACAAGAGAGCACCATACTGGACCAAC...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTGTTGGTCCAGTATGGTaGTCTCTTGTTGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGVGPVW*SLVVTV
Trigger: AACAGTAACAACAAGAGAGCACCATACTGGACCAAC...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTCCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCCCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SNDFLVMEVKGPQHSPFSPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...GGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCACCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCCGTTCTTTTCCACGTaGTTGATCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYPFFST*LIHWMW
Trigger: CCACATCCAGTGGATCAAGCACGTGGAAAAGAACGG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCCGGGCCCGTATTTACTaGCGTTCTTTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTRARIY*RSFPRA
Trigger: AGCACGTGGAAAAGAACGGCAGTAAATACGGGCCCG...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACAGAACTGTCAACCATaGAGAGTGAAAGGATATCCC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVQNCQP*RVKGYP
Trigger: GGGATATCCTTTCACTCTGCATGGTTGACAGTTCTG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAGAACTGTCAACCATaGAGAGTGAAAGGATATCCC +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKQNCQP*RVKGYP
Trigger: GGGATATCCTTTCACTCTGCATGGTTGACAGTTCTG...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCATTAAGAAGACCCCTATaGAGTAAATGGCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSLRRPL*SKWLSP
Trigger: TGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAA...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAATTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: LIGCESENSIQVFYQLLEFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATTCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYSLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATTGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGAAGTCTTCTACCAACTaGTTGAACGTTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKKSSTN*LNVGLW
Trigger: CCAGAGACCAACGTTCAAGCAGTTGGTAGAAGACTT...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSELVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 4 (lower is better)
Translates to: SCQREAHSAIISTKVCPQVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTTTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCATTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGATACATGGTTCCCTTTaGACAGAGGAAATAGATGCC +
Preference number: 4 (lower is better)
Translates to: SDISYHVHFTQMTLGNHEIHGSL*TEEIDA
Trigger: GGCATCTATTTCCTCTGTGCAAAGGGAACCATGTAT...CTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGAAAGGACTCAGGCTTaGCGTTGCCTCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGERTQA*RCLHQT
Trigger: AGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTC...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTCCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFPNAEE*SLGLRR
Trigger: CCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGG...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CCA 90 bp TCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGTTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SDISYHVHFTQMTLGNHEFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...CTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCATATCTCCAGGTAGTCTaGGGAAGCTGTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPYLQVV*GSCNLL
Trigger: AAGGAGATTACAGCTTCCCCAGACTACCTGGAGATA...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCCCCTATGCAGTAAATaGCTATCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYPLCSK*LSPGSL
Trigger: CAGACTACCTGGAGATAGCCATTTACTGCATAGGGG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTGGAAACTCCCATTTTaGGTCCTCTGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGWKLPF*VLWKFI
Trigger: TATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTTGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTGTTCTTCATTCGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGTGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: VFFIRHRMTVTTIQAIKKCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...CTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGAAGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAACTGGAAGCCGCCCATTaGTGGTCTTTTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKELEAAH*WSFCNS
Trigger: ACTATTACAAAAAGACCACCAATGGGCGGCTTCCAG...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTATCAAACAGGGCTTCTaGAGCCATCCACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSIKQGF*SHPLDW
Trigger: CCAGTCAAGTGGATGGCTCCAGAAGCCCTGTTTGAT...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMSCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAAAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTA +
Preference number: 4 (lower is better)
Translates to: LIGCESENSIQVFYQLLESSWRS*TQPKLL
Trigger: TAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSELHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAGTGAGAGGGGTTACATaGTGGCTTGTGGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQVRGVT*WLVAVH
Trigger: GTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTGGTACCATTTATCTTaGGAAGTCCAGTTAGACGTT +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPWYHLS*EVQLDV
Trigger: AACGTCTAACTGGACTTCCCAAGATAAATGGTACCA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCACAACGCCAAAGAGTCTaGAAGCCATTATCAAAATTC +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSQRQRV*KPLSKF
Trigger: GAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTG...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAGAGAGATTTGGTATTTaGTTGGTGGCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPERFGI*LVALLA
Trigger: AGCCAGAAGAGCCACCAACCAAATACCAAATCTCTC...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGGAGAGATTTGGTATTTaGTTGGTGGCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWERFGI*LVALLA
Trigger: AGCCAGAAGAGCCACCAACCAAATACCAAATCTCTC...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAGAGAGATTTGGTATTTaGTTGGTGGCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVERFGI*LVALLA
Trigger: AGCCAGAAGAGCCACCAACCAAATACCAAATCTCTC...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACATACTGAGGAAGGCATaGTTCGTAAGGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYILRKA*FVRHGV
Trigger: GACCCCATGCCTTACGAACCATGCCTTCCTCAGTAT...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LKILTGVSNAKESGSHYQTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMPSFLC*SSMVLL
Trigger: AAGGAGCACCATACTGGACCAACACAGAAAAGATGG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356226.8
ENST00000369059.5
ENST00000604236.5
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTCTGTGGAAGGTCACTaGTTTGTTGCCCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSVEGH*FVALSP
Trigger: GGGAGAAAGGGCAACAAACCAGTGACCTTCCACAGA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
3UTR CAA 72 bp AGTCCAGTTAGACGTTGCGTTGACGTAATGACAGGGTaGCACACCAAAATGAAACACCTTCCTATGAATGAG +
Preference number: 4 (lower is better)
Translates to: SPVRRCVDVMTG*HTKMKHLPMNE
Trigger: CTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAACTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
3UTR CAA 72 bp AAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGTTGCGTTGACGTAATG +
Preference number: 4 (lower is better)
Translates to: KASFKRTLVPFI*GSPVRRCVDVM
Trigger: CATTACGTCAACGCAACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
ENST00000638709.1
CDS-3UTR TCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLCYCSH*QNLPHH
Trigger: ATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACA...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp GTAATCTCAGCTTCCAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGGGTGGTACGTGTGATTaGTGGACCCGTATTCATTCT +
Preference number: 4 (lower is better)
Translates to: VISASKMSDISYHVHFTQGGTCD*WTRIHS
Trigger: AGAATGAATACGGGTCCATCAATCACACGTACCACC...CTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTGGAAGCTGAGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAAGTCAACCATGCAGAGTaGAAGGATATCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKEVNHAE*KDIPIE
Trigger: TTCTATTGGGATATCCTTTCACTCTGCATGGTTGAC...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSERHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCCCTGCCAGAATTAGATaGAAGCAATCCCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESPARIR*KQSLKK
Trigger: CTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGG...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCTCATCATCTCCGGATaGGATGGCATCTGTGACATT +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVLIISG*DGICDI
Trigger: AATGTCACAGATGCCATCTCATCCGGAGATGATGAG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR TCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAATCAGCGAGGTATATTaGCCTTGTCCAGTTTACTCA +
Preference number: 4 (lower is better)
Translates to: SCQREAHSAIISTKVCPQISEVY*PCPVYS
Trigger: TGAGTAAACTGGACAAGGTCAATATACCTCGCTGAT...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR TCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTTCTGTCTGGATATCTaGCTCTCGGAAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSEFCLDI*LSEVLQ
Trigger: CTGCAAGACTTCCGAGAGTCAGATATCCAGACAGAA...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGACGTTAATCCCATCTaGACACTTCCTCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGDVNPI*TLPLRA
Trigger: TGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCCCGTTCTTTTCCACGTaGTTGATCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTPFFST*LIHWMW
Trigger: CCACATCCAGTGGATCAAGCACGTGGAAAAGAACGG...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAACAGAACTGTCAACCATaGAGAGTGAAAGGATATCCC +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQQNCQP*RVKGYP
Trigger: GGGATATCCTTTCACTCTGCATGGTTGACAGTTCTG...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTTTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTTGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAAAGTCTTCTACCAACTaGTTGAACGTTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQKSSTN*LNVGLW
Trigger: CCAGAGACCAACGTTCAAGCAGTTGGTAGAAGACTT...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTCGCTGCCGCTGCTGCTaGAGTCACTGGTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFRCRCC*SHWCFV
Trigger: AACAAAACACCAGTGACTGCAGCAGCAGCGGCAGCG...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS-3UTR GCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSESPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYSPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCAAGCAGAAGGCCAGCTaGCAGAGAGAAGCACATTCT +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTKQKAS*QREAHS
Trigger: AGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTT...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATATCTTGCACGGCTATTaGAAAGTGAGTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYILHGY*KVSGCF
Trigger: GAAACACCCACTCACTTTGCAATAGCCGTGCAAGAT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTATCTTGCACGGCTATTaGAAAGTGAGTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVILHGY*KVSGCF
Trigger: GAAACACCCACTCACTTTGCAATAGCCGTGCAAGAT...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTA +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKKISVI*IHLARL
Trigger: TAGCCGTGCAAGATGAATGCAGATTACACTGATCTT...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTA +
Preference number: 4 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTKISVI*IHLARL
Trigger: TAGCCGTGCAAGATGAATGCAGATTACACTGATCTT...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAATTATCAGCTGGTGTCTaGATAGCTGGGTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQLSAGV*IAGFPS
Trigger: TGAAGGAAACCCAGCTATGCAGACACCAGCTGATAA...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR GCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTTCCCTCCCTAGGTTGTaGTTGGGTTTTGACACTGAT +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVSLPRL*LGFDTD
Trigger: ATCAGTGTCAAAACCCAAGCACAACCTAGGGAGGGA...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTTTTCAGCCACCGCATaGTTGGCATTGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFFSATA*LALGSP
Trigger: GGGGGAACCCAATGCCAACCATGCGGTGGCTGAAAA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATTATCTCCAGGTAGTCTaGGGAAGCTGTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYYLQVV*GSCNLL
Trigger: AAGGAGATTACAGCTTCCCCAGACTACCTGGAGATA...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCCCCTATGCAGTAAATaGCTATCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYPLCSK*LSPGSL
Trigger: CAGACTACCTGGAGATAGCCATTTACTGCATAGGGG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGGAAACTCCCATTTTaGGTCCTCTGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVWKLPF*VLWKFI
Trigger: TATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCA...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGAAGCCGCCCATTGGTaGTCTTTTTGTAATAGTCTA +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMEAAHW*SFCNSL
Trigger: TAGACTATTACAAAAAGACCACCAATGGGCGGCTTC...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATGAAGCCGCCCATTGGTaGTCTTTTTGTAATAGTCTA +
Preference number: 4 (lower is better)
Translates to: KILTGVSNAKESGSHYQNEAAHW*SFCNSL
Trigger: TAGACTATTACAAAAAGACCACCAATGGGCGGCTTC...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGATCAAACAGGGCTTCTaGAGCCATCCACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRIKQGF*SHPLDW
Trigger: CCAGTCAAGTGGATGGCTCCAGAAGCCCTGTTTGAT...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAATCAAACAGGGCTTCTaGAGCCATCCACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGIKQGF*SHPLDW
Trigger: CCAGTCAAGTGGATGGCTCCAGAAGCCCTGTTTGAT...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCATCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPSCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYSCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSSWRS*TQPKLL
Trigger: TAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTCTGTCCTCAAGGAATaGATTAAGGCATCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPSVLKE*IKASFK
Trigger: CTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAAGAGAGATTTGGTATTTaGTTGGTGGCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: QNVRHFIPRPLYTDDAWEERFGI*LVALLA
Trigger: AGCCAGAAGAGCCACCAACCAAATACCAAATCTCTC...TTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLTAVYV*ILRKAW
Trigger: CCATGCCTTCCTCAGTATCCACACATAAACGGCAGT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTACTGCCGTTTATGTGTaGATACTGAGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVTAVYV*ILRKAW
Trigger: CCATGCCTTCCTCAGTATCCACACATAAACGGCAGT...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAACTACAGTTGCCCTGTTaGGGAAATGATGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: MPGTDTELVPSNDFLVMELQLPC*GNDASL
Trigger: AAGAGAAGCATCATTTCCCCAACAGGGCAACTGTAG...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCATGCAAGATTATCAGCTaGTGTCTGCATAGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPCKIIS*CLHSWV
Trigger: AACCCAGCTATGCAGACACCAGCTGATAATCTTGCA...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR TCA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAATGTTACTGTTCTCACTaGCAAAATCTTCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: MPGTDTELVPSNDFLVMECYCSH*QNLPHH
Trigger: ATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACA...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR TCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGTGGTACGTGTGATTaGTGGACCCGTATTCATTCT +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGGGTCD*WTRIHS
Trigger: AGAATGAATACGGGTCCATCAATCACACGTACCACC...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCGGTGGTACGTGTGATTaGTGGACCCGTATTCATTCT +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTGGTCD*WTRIHS
Trigger: AGAATGAATACGGGTCCATCAATCACACGTACCACC...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTTCCAGGTGGTACGTGTaGTTGATGGACCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFSRWYV*LMDPYS
Trigger: TGAATACGGGTCCATCAATCACACGTACCACCTGGA...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTCAACCATGCAGAGTaGAAGGATATCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPVNHAE*KDIPIE
Trigger: TTCTATTGGGATATCCTTTCACTCTGCATGGTTGAC...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTCCTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGTCAACCATGCAGAGTaGAAGGATATCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: FLIGCESENSIQVFYQLLVNHAE*KDIPIE
Trigger: TTCTATTGGGATATCCTTTCACTCTGCATGGTTGAC...AAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGTCATTCGGCACAGGATaGCTGTTACCACCATACAGG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALSFGTG*LLPPYR
Trigger: CCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGA...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAATCATTCGGCACAGGATaGCTGTTACCACCATACAGG +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQSFGTG*LLPPYR
Trigger: CCTGTATGGTGGTAACAGTCATCCTGTGCCGAATGA...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGAGGCATACTCAACTATaGCATAGAGAGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRRHTQL*HREAHP
Trigger: AGGATGGGCCTCTCTATGTCATAGTTGAGTATGCCT...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: CRYEAGSFGEVLPELDESSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCATCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMLRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTT +
Preference number: 4 (lower is better)
Translates to: VCYSTSVPFSPAQLTFSETYTSG*EIWYLV
Trigger: AACCAAATACCAAATCTCTCAACCAGAAGTGTACGT...CTCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp CAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAAGTTGGTCCAGTATGGTaGTCTCTTGTTGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: QNVRHFIPRPLYTDDAWEVGPVW*SLVVTV
Trigger: AACAGTAACAACAAGAGAGCACCATACTGGACCAAC...TTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGTTGGTCCAGTATGGTaGTCTCTTGTTGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYVGPVW*SLVVTV
Trigger: AACAGTAACAACAAGAGAGCACCATACTGGACCAAC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCCCAATGCGATGCTCCTaGTTAAACTCCTTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTPMRCS*LNSFPF
Trigger: AAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGG...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCCGTTCTTTTCCACGTaGTTGATCCACTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALPFFST*LIHWMW
Trigger: CCACATCCAGTGGATCAAGCACGTGGAAAAGAACGG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCAGAACTGTCAACCATaGAGAGTGAAAGGATATCCC +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLQNCQP*RVKGYP
Trigger: GGGATATCCTTTCACTCTGCATGGTTGACAGTTCTG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTTTAAGAAGACCCCTATaGAGTAAATGGCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLLRRPL*SKWLSP
Trigger: TGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAA...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGATTTGTCAATTCCCACTaGTTCCGCCATGACCACTTG +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGFVNSH*FRHDHL
Trigger: CAAGTGGTCATGGCGGAAGCAGTGGGAATTGACAAA...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAAGTCTTCTACCAACTaGTTGAACGTTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLKSSTN*LNVGLW
Trigger: CCAGAGACCAACGTTCAAGCAGTTGGTAGAAGACTT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALLVAVH*SRNLLL
Trigger: GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCACTAGTCTGCTGTGCTaGCTGCATAGAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTTSLLC*LHRNAT
Trigger: AGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGT...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFSPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACATCTTGCACGGCTATTaGAAAGTGAGTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYILHGY*KVSGCF
Trigger: GAAACACCCACTCACTTTGCAATAGCCGTGCAAGAT...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCAGAGCCAGCACTTCTaGATTGGAACTATTTATCCC +
Preference number: 4 (lower is better)
Translates to: NYYKINKEGRTHVHLESYQSQHF*IGTIYP
Trigger: GGGATAAATAGTTCCAATGCAGAAGTGCTGGCTCTG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR GCA 90 bp AAAGGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCTTAAAACCAAAGGTCTaGTACAGCACATCTGTACCC +
Preference number: 4 (lower is better)
Translates to: KGLLQHICTLFTCPINIFLKPKV*YSTSVP
Trigger: GGGTACAGATGTGCTGTAGCAGACCTTTGGTTTTAA...GAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TTAAAACCAAAGGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTATGTGTTGGTCCAGTATaGTGCTCTCTTGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: LKPKVCYSTSVPFSPAQLCVGPV*CSLVVT
Trigger: AGTAACAACAAGAGAGCACCATACTGGACCAACACA...TAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACCTTTGGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSPSFLC*SSMVLS
Trigger: AGAGAGCACCATACTGGACCAACACAGAAAAGATGG...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATCTCAGCTTCCAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGCCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VISASKMSDISYHVHFTQPSFLC*SSMVLS
Trigger: AGAGAGCACCATACTGGACCAACACAGAAAAGATGG...CTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTGGAAGCTGAGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCCATCTTTTCTGTGTTaGTCCAGTATGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVPSFLC*SSMVLS
Trigger: AGAGAGCACCATACTGGACCAACACAGAAAAGATGG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTTTCTCTTCCAGGCGCTaGCAGAACTGTCAACCATGC +
Preference number: 4 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFFSSRR*QNCQPC
Trigger: GCATGGTTGACAGTTCTGCCAGCGCCTGGAAGAGAA...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGTATCTCCAGGTAGTCTaGGGAAGCTGTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQYLQVV*GSCNLL
Trigger: AAGGAGATTACAGCTTCCCCAGACTACCTGGAGATA...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTTATCTCCAGGTAGTCTaGGGAAGCTGTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSYLQVV*GSCNLL
Trigger: AAGGAGATTACAGCTTCCCCAGACTACCTGGAGATA...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTATCTCCAGGTAGTCTaGGGAAGCTGTAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSEYLQVV*GSCNLL
Trigger: AAGGAGATTACAGCTTCCCCAGACTACCTGGAGATA...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSESCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTA +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGSSWRS*TQPKLL
Trigger: TAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTTTACATGGTGGCTTGTaGCAGTCCACTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFLHGGL*QSTAPE
Trigger: TTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAA...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTGGTACCATTTATCTTaGGAAGTCCAGTTAGACGTT +
Preference number: 4 (lower is better)
Translates to: KILTGVSNAKESGSHYQNWYHLS*EVQLDV
Trigger: AACGTCTAACTGGACTTCCCAAGATAAATGGTACCA...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTGGTACCATTTATCTTaGGAAGTCCAGTTAGACGTT +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRWYHLS*EVQLDV
Trigger: AACGTCTAACTGGACTTCCCAAGATAAATGGTACCA...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCACTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SVICIHLARLLQSEWVFPLLRGR*YHLSWE
Trigger: TTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAG...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAACGCCAAAGAGTCTaGAAGCCATTATCAAAATTC +
Preference number: 4 (lower is better)
Translates to: VICIHLARLLQSEWVFPKQRQRV*KPLSKF
Trigger: GAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTG...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACAACGCCAAAGAGTCTaGAAGCCATTATCAAAATTC +
Preference number: 4 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVQRQRV*KPLSKF
Trigger: GAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAACAACGCCAAAGAGTCTaGAAGCCATTATCAAAATTC +
Preference number: 4 (lower is better)
Translates to: AREKHILLSFQLRSVLKEQRQRV*KPLSKF
Trigger: GAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTG...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: YYKINKEGRTHVHLESYWIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAATAAGCTCATATACATaGTTCCCTTTGCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLLQHICTLFTCPINIFRISSYT*FPLHRG
Trigger: TCCTCTGTGCAAAGGGAACCATGTATATGAGCTTAT...TCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGTCCGCATCTTCTGTCTaGATATCTGACTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRSASSV*ISDSRK
Trigger: CTTCCGAGAGTCAGATATCCAGACAGAAGATGCGGA...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAATCTCCCTCACAGGCTTaGCACATGCTCGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQSPSQA*HMLVLF
Trigger: GAACAAAACGAGCATGTGCCAAGCCTGTGAGGGAGA...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
3UTR CAA 72 bp AAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATaGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACA +
Preference number: 4 (lower is better)
Translates to: KISVICIHLARL*QSEWVFPKQNT
Trigger: TGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSECYCSH*QNLPHH
Trigger: ATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACA...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLCYCSH*QNLPHH
Trigger: ATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SCQREAHSAIISTKVCPQNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTTCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR TCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTCTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 4 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVLRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGTCAGGGTAACTAGGTaGATACTGTTCGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALVRVTR*ILFERL
Trigger: CAACCTCTCGAACAGTATTCACCTAGTTACCCTGAC...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTGACGTTAATCCCATCTaGACACTTCCTCTACGGGCA +
Preference number: 4 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFDVNPI*TLPLRA
Trigger: TGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATTTAAGAAGACCCCTATaGAGTAAATGGCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYLRRPL*SKWLSP
Trigger: TGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAA...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAATGTACAGTTCGTTGGTaGAGTTGGCTGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQCTVRW*SWLAYP
Trigger: TGGATAAGCCAGCCAACTGCACCAACGAACTGTACA...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAAAGTCTTCTACCAACTaGTTGAACGTTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGKSSTN*LNVGLW
Trigger: CCAGAGACCAACGTTCAAGCAGTTGGTAGAAGACTT...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTAAGTCTTCTACCAACTaGTTGAACGTTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFKSSTN*LNVGLW
Trigger: CCAGAGACCAACGTTCAAGCAGTTGGTAGAAGACTT...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTAAGATCAGTGTAATCTaGATTCATCTTGCACGGCTA +
Preference number: 4 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVKISVI*IHLARL
Trigger: TAGCCGTGCAAGATGAATGCAGATTACACTGATCTT...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGACAGAGCCAGCACTTCTaGATTGGAACTATTTATCCC +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGQSQHF*IGTIYP
Trigger: GGGATAAATAGTTCCAATGCAGAAGTGCTGGCTCTG...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369059.5
ENST00000604236.5
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: MPGTDTELVPSNDFLVMEISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCCCCTATGCAGTAAATaGCTATCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALPLCSK*LSPGSL
Trigger: CAGACTACCTGGAGATAGCCATTTACTGCATAGGGG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTTTACCAAAACATTTCTaGCTGCTAAATCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTLPKHF*LLNLDE
Trigger: TTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAA...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGGAAGCCGCCCATTGGTaGTCTTTTTGTAATAGTCTA +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSEEAAHW*SFCNSL
Trigger: TAGACTATTACAAAAAGACCACCAATGGGCGGCTTC...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTTCATGTACAGTTCGTTaGTGCAGTTGGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFSCTVR*CSWLAY
Trigger: ATAAGCCAGCCAACTGCACCAACGAACTGTACATGA...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGCTGGTGTTTTGTTCCTaGGTAGATTTCACATCAGGA +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSELVFCS*VDFTSG
Trigger: TCCTGATGTGAAATCTACCCAGGAACAAAACACCAG...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS-3UTR CCA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTCTGTCCTCAAGGAATaGATTAAGGCATCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMSVLKE*IKASFK
Trigger: CTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAAGCCACGTACACTTCTaGTTGAGAGATTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: MPGTDTELVPSNDFLVMESHVHF*LRDLVF
Trigger: AAATACCAAATCTCTCAACCAGAAGTGTACGTGGCT...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAAATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LIGCESENSIQVFYQLLEIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CCA 90 bp TCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCGAACAGACACTGAATTaGTACCGTCTAATGACTTTC +
Preference number: 4 (lower is better)
Translates to: SNDFLVMEVKGPQHSPFSEQTLN*YRLMTF
Trigger: GAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTC...GGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTCTCTTTCCTCCAAAATaGCAGTCTCTTAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFLFPPK*QSLSNA
Trigger: GGCGTTGCTAAGAGACTGCCATTTTGGAGGAAAGAG...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR TCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGCTGCTAAATCTCGATaGATACATTTTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGAAKSR*IHFWEA
Trigger: GGCTTCCCAAAAATGTATTCATCGAGATTTAGCAGC...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCATCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: WIKASFKRTLVPFILGSPSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGTCCACCTCTGCTCGGTaGAAATTAAGAAATTATGTG +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQSTSAR*KLRNYV
Trigger: CACATAATTTCTTAATTTTCACCGAGCAGAGGTGGA...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTACACCTTCCTATGAATaGGTTCTTTTAATATGGGGC +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSTPSYE*VLLIWG
Trigger: GCCCCATATTAAAAGAACTCATTCATAGGAAGGTGT...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCCTGCCAGAATTAGATaGAAGCAATCCCTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVPARIR*KQSLKK
Trigger: CTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGTCCAGTTTACTCAGTaGGAGCTTTTCTATCTCCTG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALVQFTQ*ELFYLL
Trigger: CAGGAGATAGAAAAGCTCTCACTGAGTAAACTGGAC...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR GCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTCCTTGAAGGTCATCTaGTCCTCAGGAACACGGTTA +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFSLKVI*SSGTRL
Trigger: TAACCGTGTTCCTGAGGAGCAGATGACCTTCAAGGA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAAGTCTTCTACCAACTaGTTGAACGTTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQKSSTN*LNVGLW
Trigger: CCAGAGACCAACGTTCAAGCAGTTGGTAGAAGACTT...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGAAGTCTTCTACCAACTaGTTGAACGTTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALKSSTN*LNVGLW
Trigger: CCAGAGACCAACGTTCAAGCAGTTGGTAGAAGACTT...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGTCTGCTGTGCTGCCTaGATAGAAATGCCACTTAAA +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALVCCAA*IEMPLK
Trigger: TTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGAC...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTAGTCCAGTTAGACGTTaGGTTGACGTAATGACAGGG +
Preference number: 4 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFSPVRR*VDVMTG
Trigger: CCCTGTCATTACGTCAACGCAACGTCTAACTGGACT...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAATGTACCCTTTTCACCTaGCCAATTAACATTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QNVRHFIPRPLYTDDAWECTLFT*PINIFR
Trigger: TCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACA...TTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR GCA 90 bp CAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAATGGCCTACTTATCTGTaGACTCTGACAAAAATGTAT +
Preference number: 4 (lower is better)
Translates to: QNVRHFIPRPLYTDDAWEWPTYL*TLTKMY
Trigger: ATACATTTTTGTCAGAGTGCACAGATAAGTAGGCCA...TTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTGTGTTGGTCCAGTATaGTGCTCTCTTGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTCVGPV*CSLVVT
Trigger: AGTAACAACAAGAGAGCACCATACTGGACCAACACA...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTCCCCTATGCAGTAAATaGCTATCTCCAGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFPLCSK*LSPGSL
Trigger: CAGACTACCTGGAGATAGCCATTTACTGCATAGGGG...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTCCATTTTGGGTCCTCTaGAAGTTCATACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFPFWVL*KFILGD
Trigger: GTCTCCGAGTATGAACTTCCAGAGGACCCAAAATGG...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGATGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTTACCAAAACATTTCTaGCTGCTAAATCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRLPKHF*LLNLDE
Trigger: TTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAA...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTAGTTCATGGAGGAGCTaGACTCAGCCGAAACTGTTA +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFSSWRS*TQPKLL
Trigger: TAACAGTTTCGGCTGAGTCCAGCTCCTCCATGAACT...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: IKASFKRTLVPFILGSPVLLRGR*YHLSWE
Trigger: TTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGCTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLLLRGR*YHLSWE
Trigger: TTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAG...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGCTTTTAAGAGGACGCTaGTACCATTTATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQLLRGR*YHLSWE
Trigger: TTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAG...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGAGCCACGTACACTTCTaGTTGAGAGATTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: THKISVICIHLARLLQSESHVHF*LRDLVF
Trigger: AAATACCAAATCTCTCAACCAGAAGTGTACGTGGCT...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR CCA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTACCTTCTTCTCCTCCTaGGGAAGATTACAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFTFFSS*GRLQVF
Trigger: GAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGT...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTAATAGTCTATATTGTTaGTATCTCTGGCGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSNSLYC*YLWRVQ
Trigger: TTGGACTCGCCAGAGATATCAACAATATAGACTATT...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGCTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 4 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRLRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTGAATACAGGCTAATCTaGTTAATGTGCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSEYRLI*LMCNSE
Trigger: TTCTGAGTTGCACATTAATCAGATTAGCCTGTATTC...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTTAACTAGTCTGCTGTaGTGCCTGCATAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFLTSLL*CLHRNA
Trigger: GGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTTTCCATATCTCCATGTaGACGTTAATCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFFHISM*TLIPSA
Trigger: TGCAGATGGGATTAACGTCCACATGGAGATATGGAA...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTTGGAAACTCCCATTTTaGGTCCTCTGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFWKLPF*VLWKFI
Trigger: TATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCA...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAATGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTTGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGTGGTACCATTTATCTTaGGAAGTCCAGTTAGACGTT +
Preference number: 4 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRWYHLS*EVQLDV
Trigger: AACGTCTAACTGGACTTCCCAAGATAAATGGTACCA...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTTCTGTCCTCAAGGAATaGATTAAGGCATCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSSVLKE*IKASFK
Trigger: CTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGA...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTCTGTCCTCAAGGAATaGATTAAGGCATCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSVLKE*IKASFK
Trigger: CTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAAGCCACGTACACTTCTaGTTGAGAGATTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGSHVHF*LRDLVF
Trigger: AAATACCAAATCTCTCAACCAGAAGTGTACGTGGCT...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR TCA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFCYCSH*QNLPHH
Trigger: ATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACA...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR TCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGATCTGTAAGTGTGTGCTaGCATAAATCTTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGSVSVC*HKSSPI
Trigger: AATTGGAGAAGATTTATGTCAGCACACACTTACAGA...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTTTAAGAAGACCCCTATaGAGTAAATGGCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFLRRPL*SKWLSP
Trigger: TGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAA...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: SSPIITKLTRKAERTSTLVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: EWIKASFKRTLVPFILGSVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGATTTCCCTTGTCAGATaGGACCACACTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALISLVR*DHTFHN
Trigger: ATTATGGAAAGTGTGGTCCCATCTGACAAGGGAAAT...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTGTCAGCTTATCTCTTaGAAACTCCCATTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFCQLIS*KLPFWV
Trigger: GACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR TCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTCTAAGAACAATCGTCTaGCAGCAGCATTTAAACACA +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFLRTIV*QQHLNT
Trigger: TGTGTTTAAATGCTGCTGTCAGACGATTGTTCTTAG...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR GCA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGTATTTTTCCACCTCTaGTCGGTGAAAATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGVFFHL*SVKIKK
Trigger: TTTCTTAATTTTCACCGAGCAGAGGTGGAAAAATAC...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR GCA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAACATCTTTCAGGAATaGAAGATTATCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FVTHKISVICIHLARLLQNIFQE*KIISWC
Trigger: ACACCAGCTGATAATCTTGCATTCCTGAAAGATGTT...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CCA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTTTACCAAAACATTTCTaGCTGCTAAATCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFLPKHF*LLNLDE
Trigger: TTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAA...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTACCAAAACATTTCTaGCTGCTAAATCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: KSSPIITKLTRKAERTSTLPKHF*LLNLDE
Trigger: TTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAA...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTATCCATATATACAAGTaGAGACAACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFIHIYK*RQQALG
Trigger: TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGAT...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CCA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTTACCAAAACATTTCTaGCTGCTAAATCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFLPKHF*LLNLDE
Trigger: TTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS TCA 90 bp CTCCCGGGCTTCACGCGTACCCCAGGCTGCGGAGGAGCGCGGGCATaGCGCCCGCGGGCTGCCCTCGGATTTGGGGAACGAGAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: LPGFTRTPGCGGARA*RPRAALGFGEREEE
Trigger: TTCTTCCTCTCGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCATGCCCGCGCTCCTCCGCAGCCTGGGGTACGCGTGAAGCCCGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CCA 90 bp GCCCGGGGTTGCGGGGAGCAACTCCAAACGCAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAGCCTCCCGGGCTTCACGCGTACCCC +
Preference number: 5 (lower is better)
Translates to: ARGCGEQLQTQKSGP*VFAGAKPPGLHAYP
Trigger: GGGGTACGCGTGAAGCCCGGGAGGCTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGGAGTTGCTCCCCGCAACCCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CCA 90 bp GCGACGAGCCCGGGGTTGCGGGGAGCAACTCCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGGCGCCAAGCCTCCCGGGCTTCACGC +
Preference number: 5 (lower is better)
Translates to: ATSPGLRGATPNAEE*SLGLRRRQASRASR
Trigger: GCGTGAAGCCCGGGAGGCTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS GCA 90 bp GCGTACCCCAGGCTGCGGAGGAGCGCGGGCATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACGAGAGGAAGAAAGGACTCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: AYPRLRRSAGMTPAG*PRIWGTRGRKDSGL
Trigger: CAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCATGCCCGCGCTCCTCCGCAGCCTGGGGTACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS-3UTR CAA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCACCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAPPRPV*SPRPAW
Trigger: CCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGG...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS GCA 90 bp AGGACTCAGGCTTGGCGTTGCCTCCACCAAACTTTGCTCGCGAGTTaGGAAGGCTCAGAGCGCGCAGGCAAGCTGCGGCCTCGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: RTQAWRCLHQTLLAS*EGSERAGKLRPRGP
Trigger: GGGGCCCCGAGGCCGCAGCTTGCCTGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CCA 90 bp CTGCGGAGGAGCGCGGGCATGACGCCCGCGGGCTGCCCTCGGATTTaGGGAACGAGAGGAAGAAAGGACTCAGGCTTGGCGTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LRRSAGMTPAGCPRI*GTRGRKDSGLALPP
Trigger: TGGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCATGCCCGCGCTCCTCCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CCA 90 bp CCAGGGACCGGCCCAGACCACGCGCACCTATGCAGGCCTGACCTGTaGCAACAGCCCATGGGCAACCCGCACCTTTGTCTTGGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: PGTGPDHAHLCRPDL*QQPMGNPHLCLGAS
Trigger: CGAGGCACCAAGACAAAGGTGCGGGTTGCCCATGGGCTGTTGCCACAGGTCAGGCCTGCATAGGTGCGCGTGGTCTGGGCCGGTCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 90 bp GCACACTTCCTCTACGGGCATGGACTACGCGCAATGCCTTCAGCCTaGGGTGGGCTCAGGAACCGAGGCGCTGCCGCTGCTGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: AHFLYGHGLRAMPSA*GGLRNRGAAAAAAV
Trigger: GACTGCAGCAGCAGCGGCAGCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000336553.10
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000491111.1
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
ENST00000684153.1
CDS CCA 90 bp CTTCCTCTACGGGCATGGACTACGCGCAATGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGCTGCCGCTGCTGCTGCAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: LPLRAWTTRNAFSLR*AQEPRRCRCCCSHW
Trigger: CCAGTGACTGCAGCAGCAGCGGCAGCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357555.9
ENST00000682550.1
CDS CCA 90 bp CCCTGCAGGGCGGCCCCGCGGCTTTCTAGCTTGTTTCCTGACCCGTaGGTCTTCCTGTCACTCCACGGGAGACCGCAGAAGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: PCRAAPRLSSLFPDP*VFLSLHGRPQKVQH
Trigger: GTGCTGCACCTTCTGCGGTCTCCCGTGGAGTGACAGGAAGACCCACGGGTCAGGAAACAAGCTAGAAAGCCGCGGGGCCGCCCTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 90 bp CTTCCTCTACGGGCATGGACTACGCGCAATGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGCTGCCGCTGCTGCTGCAGTCACTTG +
Preference number: 5 (lower is better)
Translates to: LPLRAWTTRNAFSLR*AQEPRRCRCCCSHL
Trigger: CAAGTGACTGCAGCAGCAGCGGCAGCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000490349.5
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000684153.1
CDS CCA 90 bp CTTCCTCTACGGGCATGGACTACGCGCAATGCCTTCAGCCTGCGGTaGGCTCAGGAACCGAGGCGCTGCCGCTGCTGCTGCAGTCACTCA +
Preference number: 5 (lower is better)
Translates to: LPLRAWTTRNAFSLR*AQEPRRCRCCCSHS
Trigger: TGAGTGACTGCAGCAGCAGCGGCAGCGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491111.1
ENST00000683250.1
CDS-3UTR CAA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGGCGACGAGCCCGGGGTaGCGGGGAGCAACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERATSPG*RGATPN
Trigger: GTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGC...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCGCGACGAGCCCGGGGTaGCGGGGAGCAACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VRTAGERGYMVACGSPLLATSPG*RGATPN
Trigger: GTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGC...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSPPRPV*SPRPAW
Trigger: CCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS GCA 90 bp GGAGACCGCAGAAGGTGCAGCACAGTGGCCCAGGAAGACCACTCCTaGTGGCTCTGCAAAGTCAGGAGCCCTCAGCCAGGCAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: GDRRRCSTVAQEDHS*WLCKVRSPQPGSQT
Trigger: TGTCTGGCTGCCTGGCTGAGGGCTCCTGACTTTGCAGAGCCAGCAGGAGTGGTCTTCCTGGGCCACTGTGCTGCACCTTCTGCGGTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS GCA 90 bp CCTGCCCCCAAAGACAGGCAGAGTGACAAGCAGGAAGGGCTTGGCTaGGGAGCGGTCCCCATGCCAGGCCTGTGCTGGGCTCTTCAATTT +
Preference number: 5 (lower is better)
Translates to: PAPKDRQSDKQEGLG*GAVPMPGLCWALQF
Trigger: AAATTGAAGAGCCCAGCACAGGCCTGGCATGGGGACCGCTCCGCAGCCAAGCCCTTCCTGCTTGTCACTCTGCCTGTCTTTGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS GCA 90 bp CTGACCCGTGGGTCTTCCTGTCACTCCACGGGAGACCGCAGAAGGTaGAGCACAGTGGCCCAGGAAGACCACTCCTGCTGGCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LTRGSSCHSTGDRRR*STVAQEDHSCWLCK
Trigger: TTTGCAGAGCCAGCAGGAGTGGTCTTCCTGGGCCACTGTGCTGCACCTTCTGCGGTCTCCCGTGGAGTGACAGGAAGACCCACGGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS-3UTR CAA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAA +
Preference number: 5 (lower is better)
Translates to: VRTAGERGYMVACGSPLLAEEWS*GLRRRQ
Trigger: TTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGC...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGTGGAGGCATTaGCCGGCAGTCCGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: PQPVRTAGERGYMVACGSPLWRH*PAVRLG
Trigger: TCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTGG...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS GCA 90 bp GAGAGGAAGAAAGGACTCAGGCTTGGCGTTGCCTCCACCAAACTTTaGTCGCGAGTTGCGAAGGCTCAGAGCGCGCAGGCAAGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: ERKKGLRLGVASTKL*SRVAKAQSAQASCG
Trigger: GCCGCAGCTTGCCTGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CCA 90 bp GAGGCCAGCCCTTCTTGTTATGGACTCCTACGGTGTGGCGCAGCCTaGACCACCAACTGGGACCCAGTCTCCCATTGGTCTCCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: EASPSCYGLLRCGAA*TTNWDPVSHWSPWQ
Trigger: CTGCCAAGGAGACCAATGGGAGACTGGGTCCCAGTTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGAAGGGCTGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CCA 90 bp ACGGGCAACAGAGGCCAGCCCTTCTTGTTATGGACTCCTACGGTGTaGCGCAGCCTGGACCACCAACTGGGACCCAGTCTCCCATTGGTC +
Preference number: 5 (lower is better)
Translates to: TGNRGQPFLLWTPTV*RSLDHQLGPSLPLV
Trigger: GACCAATGGGAGACTGGGTCCCAGTTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGAAGGGCTGGCCTCTGTTGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS-3UTR CAA 90 bp GTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCCCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: VLSCLGTGRHSHSCFNTAPPRPV*SPRPAW
Trigger: CCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGG...GGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp CCTGCCAGCATGGGGGTGTCTGCCGTTGAAGAGAGGCGTGTTGTTATCCTCACCGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: PASMGVSAVEERRVVILTAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...GGTGAGGATAACAACACGCCTCTCTTCAACGGCAGACACCCCCATGCTGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGEIRLVS*CTAGWL
Trigger: CAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTAT...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS CCA 90 bp ATGGCTCATGCATCAACGGGCAACAGAGGCCAGCCCTTCTTGTTATaGACTCCTACGGTGTGGCGCAGCCTGGACCACCAACTGGGACCC +
Preference number: 5 (lower is better)
Translates to: MAHASTGNRGQPFLL*TPTVWRSLDHQLGP
Trigger: GGGTCCCAGTTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGAAGGGCTGGCCTCTGTTGCCCGTTGATGCATGAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS-3UTR CAA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCATGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: VHSQYARQVRGVTWWLVACLHQT*LASCEG
Trigger: GCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCA...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPPPRPV*SPRPAW
Trigger: CCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGG...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCCGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGTTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGELKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGTTCCGCCATGACCACTaGCCCAAAGCAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGEFRHDH*PKATFS
Trigger: GGAGAAGGTTGCTTTGGGCAAGTGGTCATGGCGGAA...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 5 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS TCA 90 bp CTAGGAATGTTGTTCTTTTCTGCCCTCACTGGGCCAAGCCATGGGTaGGTCTGTAACAGCCCAGGGACCGGCCCAGACCACGCGCACCTA +
Preference number: 5 (lower is better)
Translates to: LGMLFFSALTGPSHG*VCNSPGTGPDHAHL
Trigger: TAGGTGCGCGTGGTCTGGGCCGGTCCCTGGGCTGTTACAGACTCACCCATGGCTTGGCCCAGTGAGGGCAGAAAAGAACAACATTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 90 bp TCAGCCGAAACCTGTCTCCGCAGGGGGATACGTTTGGTCAGCTTGTaGACAGCCGGCTGGCTGCTGAAGTCTGGCTTCTTGGTCGTGTTC +
Preference number: 5 (lower is better)
Translates to: SAETCLRRGIRLVSL*TAGWLLKSGFLVVF
Trigger: GAACACGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTATCCCCCTGCGGAGACAGGTTTCGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000346997.6
ENST00000351936.11
ENST00000356226.8
ENST00000638709.2
ENST00000682296.1
ENST00000682550.1
ENST00000682772.1
ENST00000683211.1
ENST00000683418.1
ENST00000684153.1
CDS GCA 90 bp ACAACCACCAGGGAAAGGCTGTGTTGGTTCCTTAATCCTACACCCTaGAGGGCGGCCCCGCGGCTTTCTAGCTTGTTTCCTGACCCGTGG +
Preference number: 5 (lower is better)
Translates to: TTTRERLCWFLNPTP*RAAPRLSSLFPDPW
Trigger: CCACGGGTCAGGAAACAAGCTAGAAAGCCGCGGGGCCGCCCTGCAGGGTGTAGGATTAAGGAACCAACACAGCCTTTCCCTGGTGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 90 bp CTCCATGTGGACGTTAATCCCATCTGCACACTTCCTCTACGGGCATaGACTACGCGCAATGCCTTCAGCCTGCGGTGGGCTCAGGAACCG +
Preference number: 5 (lower is better)
Translates to: LHVDVNPICTLPLRA*TTRNAFSLRWAQEP
Trigger: CGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTCCACATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000336553.10
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000491111.1
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
ENST00000684153.1
CDS CCA 90 bp CTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTaGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVHSQYARQVRGVTW*LVAVHCSRNLLLLL
Trigger: GAGGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS-3UTR CAA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: EGRTHVHLESYWSTASTHCLHQT*LASCEG
Trigger: GCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGACCCCTATGCAGGCGACGAGCCCGGGGTaGCGGGGAGCAACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: RHRMTVTTIQAIKKTPMQATSPG*RGATPN
Trigger: GTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGC...CTGCATAGGGGTCTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGPPRPV*SPRPAW
Trigger: CCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGG...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGETVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTCTGGAGCCATCCACTaGACTGGAAGCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: EGRTHVHLESYWSTASTHSGAIH*TGSRPL
Trigger: CAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAGA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGAACACGGTTAATGTCATAGGAGTACTCCATCCCGGGTGGCCTCCGGGCTCGTCTGGAGCCATCCACTaGACTGGAAGCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: RNTVNVIGVLHPGWPPGSSGAIH*TGSRPL
Trigger: CAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAGA...CGAGCCCGGAGGCCACCCGGGATGGAGTACTCCTATGACATTAACCGTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp AGGAACACGGTTAATGTCATAGGAGTACTCCATCCCGGGTGGCCTCCGGGCTCGGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: RNTVNVIGVLHPGWPPGSERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...CGAGCCCGGAGGCCACCCGGGATGGAGTACTCCTATGACATTAACCGTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS TCA 90 bp AGCCTCCTTGGCTCCAGGCAGAGAAAGGTGGACAGGGCGCTCCGCTaGATCTCAAGCCGTTCCATCATCCCGCTAGCTGGCACTAGAAAT +
Preference number: 5 (lower is better)
Translates to: SLLGSRQRKVDRALR*ISSRSIIPLAGTRN
Trigger: ATTTCTAGTGCCAGCTAGCGGGATGATGGAACGGCTTGAGATTCAGCGGAGCGCCCTGTCCACCTTTCTCTGCCTGGAGCCAAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS TCA 90 bp CAGAGGCATCTGGGACAAGGAATAACTGGGGACGGCCTGCTCTGCTaGGATGGCTCATGCATCAACGGGCAACAGAGGCCAGCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: QRHLGQGITGDGLLC*DGSCINGQQRPALL
Trigger: AAGAAGGGCTGGCCTCTGTTGCCCGTTGATGCATGAGCCATCTCAGCAGAGCAGGCCGTCCCCAGTTATTCCTTGTCCCAGATGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS GCA 90 bp CTCGGATTTGGGGAACGAGAGGAAGAAAGGACTCAGGCTTGGCGTTaGCTCCACCAAACTTTGCTCGCGAGTTGCGAAGGCTCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: LGFGEREEERTQAWR*LHQTLLASCEGSER
Trigger: GCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCCAAATCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS GCA 90 bp GAATACAGGCCCAGCATGCCGCTGGCGGCCACAATCCCGGCTTCCTaGCTTCAATACCATAATCCTTCCTGGAGTCTGAGCCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: EYRPSMPLAATIPAS*LQYHNPSWSLSPSE
Trigger: TTCACTGGGGCTCAGACTCCAGGAAGGATTATGGTATTGAAGGCAGGAAGCCGGGATTGTGGCCGCCAGCGGCATGCTGGGCCTGTATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 90 bp GCTGCCCTCGGATTTGGGGAACGAGAGGAAGAAAGGACTCAGGCTTaGCGTTGCCTCCACCAAACTTTGCTCGCGAGTTGCGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: AALGFGEREEERTQA*RCLHQTLLASCEGS
Trigger: TGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCCAAATCCGAGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CCA 90 bp TCTTGTTATGGACTCCTACGGTGTGGCGCAGCCTGGACCACCAACTaGGACCCAGTCTCCCATTGGTCTCCTTGGCAGCAGTCAGGGTTA +
Preference number: 5 (lower is better)
Translates to: SCYGLLRCGAAWTTN*DPVSHWSPWQQSGL
Trigger: TAACCCTGACTGCTGCCAAGGAGACCAATGGGAGACTGGGTCCCAGTTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS-3UTR CAA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTAACTTTGCTCGCGAGTaGCGAAGGCTCAGAGCGCGC +
Preference number: 5 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSNFARE*RRLRAR
Trigger: GCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGACTCAGGCTTGGCGTaGCCTCCACCAAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: EGRTHVHLESYWSTASTHDSGLA*PPPNFA
Trigger: AGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTC...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVPPRPV*SPRPAW
Trigger: CCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCACTGTGGAGGCATTaGCCGGCAGTCCGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPPLWRH*PAVRLG
Trigger: TCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTGG...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGCTGAAGTCTGGCTTCTaGGTCGTGTTCTTCATTCGG +
Preference number: 5 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGELKSGF*VVFFIR
Trigger: CCGAATGAAGAACACGACCAAGAAGCCAGACTTCAG...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACTTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: EGRTHVHLESYWSTASTHLKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...GTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: PQPVRTAGERGYMVACGSTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: VRTAGERGYMVACGSPLLTVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGCATGACACCAAGTCCTaGAAGGTCATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGEHDTKS*KVICSS
Trigger: TGAGGAGCAGATGACCTTCAAGGACTTGGTGTCATG...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS TCA 90 bp CGCACCTCTAGCGACTCCCCTGGCGCAGCCACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTTGGTGGCTCTGCAGAAAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: RTSSDSPGAATYTSG*EIWYLVGGSAERWE
Trigger: CTCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCAGGGGAGTCGCTAGAGGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS GCA 90 bp CGTATTTCCATGGGCTGGTCTCCAGTCTTCCCTCCCCTGACACCCTaGCCAGCACCAAAGCAGCTCCACTATTTATCTGCCCGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: RISMGWSPVFPPLTP*PAPKQLHYLSARCF
Trigger: AAAGCACCGGGCAGATAAATAGTGGAGCTGCTTTGGTGCTGGGCAGGGTGTCAGGGGAGGGAAGACTGGAGACCAGCCCATGGAAATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 90 bp AAGCTAAACTGTTGGAGGAGTCTGCTCACAGCTCCGTATTTCTGCTaGGCTGGAGGTGAGCAGTCTCCCACCCTCACTGTCGCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: KLNCWRSLLTAPYFC*AGGEQSPTLTVALG
Trigger: CCCAAGAGCGACAGTGAGGGTGGGAGACTGCTCACCTCCAGCCCAGCAGAAATACGGAGCTGTGAGCAGACTCCTCCAACAGTTTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 90 bp ACCGAGGCGCTGCCGCTGCTGCTGCAGTCACTAAAGGAAAGAGATTaGCGAGTCAGGGAATCTTCCCCAATGCCAAATCACTCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: TEALPLLLQSLKERD*RVRESSPMPNHSSP
Trigger: TGGGCTGGAGTGATTTGGCATTGGGGAAGATTCCCTGACTCGCCAATCTCTTTCCTTTAGTGACTGCAGCAGCAGCGGCAGCGCCTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 90 bp AACTTTTCTCCCATAGCGAGTCTCTGCCTCCCGCAGGCCTTTCCCTaGGACTCTGTGAGTAAACCTATCAGAGCCATGACGCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: NFSPIASLCLPQAFP*DSVSKPIRAMTHQP
Trigger: GGGCTGGTGCGTCATGGCTCTGATAGGTTTACTCACAGAGTCCCAGGGAAAGGCCTGCGGGAGGCAGAGACTCGCTATGGGAGAAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682904.1
CDS CCA 90 bp CTGCCGTTGAAGAGAGGCGTGTTGTTATCCTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGGACTCAGCCGAAACCCACAACATCC +
Preference number: 5 (lower is better)
Translates to: LPLKRGVLLSSPAGC*SSWRSWTQPKPTTS
Trigger: GGATGTTGTGGGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAACGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683250.1
CDS-3UTR CAA 90 bp TCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCCCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: SNDFLVMEVKGPQHSPFSPPRPV*SPRPAW
Trigger: CCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGG...GGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTCGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: GERGYMVACGSPLLQKPSRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCACTGAAGTCTGGCTTCTaGGTCGTGTTCTTCATTCGG +
Preference number: 5 (lower is better)
Translates to: VHSQYARQVRGVTWWLVALKSGF*VVFFIR
Trigger: CCGAATGAAGAACACGACCAAGAAGCCAGACTTCAG...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCCTGAAGTCTGGCTTCTaGGTCGTGTTCTTCATTCGG +
Preference number: 5 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCLKSGF*VVFFIR
Trigger: CCGAATGAAGAACACGACCAAGAAGCCAGACTTCAG...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGACATGACACCAAGTCCTaGAAGGTCATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRHDTKS*KVICSS
Trigger: TGAGGAGCAGATGACCTTCAAGGACTTGGTGTCATG...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 5 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 5 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS GCA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTCCTCCTCATTGGTTGTGAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ARQVRGVTWWLVAVH*SRNLLLLLIGCESE
Trigger: CTCACTCTCACAACCAATGAGGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS GCA 90 bp AGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCATaGTCCTCTCTCGGGGACCATCGGAGCCGGGCAGTTACTTACTCT +
Preference number: 5 (lower is better)
Translates to: RRVDKKTGDRQNFPP*SSLGDHRSRAVTYS
Trigger: AGAGTAAGTAACTGCCCGGCTCCGATGGTCCCCGAGAGAGGAGCATGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491475.1
ENST00000611527.1
ENST00000613324.4
ENST00000636922.1
ENST00000683035.1
CDS GCA 90 bp TCTGCTTCTGCAAAACACAGACACAGCCATACAGCAGGGTACGGGTaGAGTGCTGCTCATCTAGGTCTCAGAGATCCAAGGTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SASAKHRHSHTAGYG*SAAHLGLRDPRLGA
Trigger: GGCCCCCAACCTTGGATCTCTGAGACCTAGATGAGCAGCACTGCACCCGTACCCTGCTGTATGGCTGTGTCTGTGTTTTGCAGAAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 90 bp AAGGCGACAGGTCTGCACAGTTCCTCACACCAGTGGACAAAAGTATaGTGCGACCTCCTAGGCAGGATAATTAGGTCCCCAGGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: KATGLHSSSHQWTKV*CDLLGRIIRSPGSV
Trigger: CACCGAGCCTGGGGACCTAATTATCCTGCCTAGGAGGTCGCACCATACTTTTGTCCACTGGTGTGAGGAACTGTGCAGACCTGTCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS CCA 90 bp TTTCCTCTTCGCTGTCTGGTCACCCAGGTGTCCGCATCTTCTGTCTaGATATCTGACTCTCGGAAGTCTTGCAGAATCGGCTGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: FPLRCLVTQVSASSV*ISDSRKSCRIGWGS
Trigger: GGAGCCCCAGCCGATTCTGCAAGACTTCCGAGAGTCAGATATCCAGACAGAAGATGCGGACACCTGGGTGACCAGACAGCGAAGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS CCA 90 bp GTTGGTGGCTCTGCAGAAAGGTGGGAGAGAGAAGACGGAGACAGATaGGAAGGAGGGAGAGGAGAGAACGTCCAACAAAGGTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: VGGSAERWEREDGDR*EGGRGENVQQRSVE
Trigger: CTCCACTGACCTTTGTTGGACGTTCTCTCCTCTCCCTCCTTCCCATCTGTCTCCGTCTTCTCTCTCCCACCTTTCTGCAGAGCCACCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CCA 90 bp GCATCTGGGACAAGGAATAACTGGGGACGGCCTGCTCTGCTGAGATaGCTCATGCATCAACGGGCAACAGAGGCCAGCCCTTCTTGTTAT +
Preference number: 5 (lower is better)
Translates to: ASGTRNNWGRPALLR*LMHQRATEASPSCY
Trigger: ATAACAAGAAGGGCTGGCCTCTGTTGCCCGTTGATGCATGAGCCATCTCAGCAGAGCAGGCCGTCCCCAGTTATTCCTTGTCCCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CCA 90 bp AAGAGAGGCGTGTTGTTATCCTCACCAGCGGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCGAAACCCACAACATCCAGGTGGTAC +
Preference number: 5 (lower is better)
Translates to: KRGVLLSSPAGCWSS*RSWTQPKPTTSRWY
Trigger: GTACCACCTGGATGTTGTGGGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACACGCCTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683250.1
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGAGAACCTCAATCTCTTaGTCCGTGGTGTTAACACCG +
Preference number: 5 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERRTSIS*SVVLTP
Trigger: CGGTGTTAACACCACGGACAAAGAGATTGAGGTTCT...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: GERGYMVACGSPLLQKPSWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTATCATGTACAGTTCGTaGGTGCAGTTGGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: PQPVRTAGERGYMVACGSIMYSS*VQLAGL
Trigger: TAAGCCAGCCAACTGCACCAACGAACTGTACATGAT...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGAGATTTGGTATTTGGTaGGTGGCTCTTCTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: GPRDTAWRRRVDKKTGDRRFGIW*VALLAL
Trigger: TAGAGCCAGAAGAGCCACCAACCAAATACCAAATCT...CCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR CAA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTTAACACCGGCGGCCTaGCTGTTTTGGCAGGACAGT +
Preference number: 5 (lower is better)
Translates to: GERGYMVACGSPLLQKPSLTPAA*LFWQDS
Trigger: ACTGTCCTGCCAAAACAGCAAGGCCGCCGGTGTTAA...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS TCA 90 bp CGCACCTCTAGCGACTCCCCTGGCGCAGCCACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTTGGTGGCTCTTCTGGCTCTAATGTG +
Preference number: 5 (lower is better)
Translates to: RTSSDSPGAATYTSG*EIWYLVGGSSGSNV
Trigger: CACATTAGAGCCAGAAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCAGGGGAGTCGCTAGAGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000346997.6
ENST00000351936.11
ENST00000358487.10
ENST00000359354.6
ENST00000369056.5
ENST00000369058.7
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000613324.4
ENST00000683035.1
ENST00000683211.1
ENST00000683678.1
CDS TCA 90 bp GATGCAGCTTCTCCACGAGGTTGGAATCCGTACCTTCCACCAATCTaGTGTTTAAGGCTGAAGTCCGGGAAAGCCAGCCTGGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: DAASPRGWNPYLPPI*CLRLKSGKASLGQG
Trigger: GCCTTGACCCAGGCTGGCTTTCCCGGACTTCAGCCTTAAACATCAGATTGGTGGAAGGTACGGATTCCAACCTCGTGGAGAAGCTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 90 bp ATCCCCGGTCCTCTTCCATATCTCCATGTGGACGTTAATCCCATCTaGACACTTCCTCTACGGGCATGGACTACGCGCAATGCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: IPGPLPYLHVDVNPI*TLPLRAWTTRNAFS
Trigger: GCTGAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTCCACATGGAGATATGGAAGAGGACCGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000336553.10
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000491111.1
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
ENST00000684153.1
CDS GCA 90 bp GCGTTCATGCCTGGGAGTCACGTCAGAGCCTCAGCAGCCGCCACTTaGCATAGGGGTGCAACATCTTTCAGGAATGCAAGATTATCAGCT +
Preference number: 5 (lower is better)
Translates to: AFMPGSHVRASAAAT*HRGATSFRNARLSA
Trigger: AGCTGATAATCTTGCATTCCTGAAAGATGTTGCACCCCTATGGCAAGTGGCGGCTGCTGAGGCTCTGACGTGACTCCCAGGCATGAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478859.5
ENST00000682772.1
CDS GCA 90 bp TCTCCTGACCCACACACACTAGGCAGGAGGTCCCTCCCTAGGTTGTaGTTGGGTTTTGACACTGATGTAAAACTCAGGCGTCAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SPDPHTLGRRSLPRL*LGFDTDVKLRRQSP
Trigger: GGGAGACTGACGCCTGAGTTTTACATCAGTGTCAAAACCCAAGCACAACCTAGGGAGGGACCTCCTGCCTAGTGTGTGTGGGTCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478859.5
ENST00000682772.1
CDS GCA 90 bp GAAGGAGGGAGAGGAGAGAACGTCCAACAAAGGTCAGTGGAGGCCTaGTTATTCCCAGGAGAAGCTGTTCTTGCTCTGCAAATGGCCCCA +
Preference number: 5 (lower is better)
Translates to: EGGRGENVQQRSVEA*LFPGEAVLALQMAP
Trigger: TGGGGCCATTTGCAGAGCAAGAACAGCTTCTCCTGGGAATAAGCAGGCCTCCACTGACCTTTGTTGGACGTTCTCTCCTCTCCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS GCA 90 bp AGAAAGCTAAACTGTTGGAGGAGTCTGCTCACAGCTCCGTATTTCTaGTGGGCTGGAGGTGAGCAGTCTCCCACCCTCACTGTCGCTCTT +
Preference number: 5 (lower is better)
Translates to: RKLNCWRSLLTAPYF*WAGGEQSPTLTVAL
Trigger: AAGAGCGACAGTGAGGGTGGGAGACTGCTCACCTCCAGCCCAGCAGAAATACGGAGCTGTGAGCAGACTCCTCCAACAGTTTAGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS GCA 90 bp TTCTGCAAAACACAGACACAGCCATACAGCAGGGTACGGGTGCAGTaGTGCTCATCTAGGTCTCAGAGATCCAAGGTTGGGGGCCACCAT +
Preference number: 5 (lower is better)
Translates to: FCKTQTQPYSRVRVQ*CSSRSQRSKVGGHH
Trigger: ATGGTGGCCCCCAACCTTGGATCTCTGAGACCTAGATGAGCAGCACTGCACCCGTACCCTGCTGTATGGCTGTGTCTGTGTTTTGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 90 bp AGGCGGAGACCTAAGGCGACAGGTCTGCACAGTTCCTCACACCAGTaGACAAAAGTATGGTGCGACCTCCTAGGCAGGATAATTAGGTCC +
Preference number: 5 (lower is better)
Translates to: RRRPKATGLHSSSHQ*TKVWCDLLGRIIRS
Trigger: GGACCTAATTATCCTGCCTAGGAGGTCGCACCATACTTTTGTCCACTGGTGTGAGGAACTGTGCAGACCTGTCGCCTTAGGTCTCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS CCA 90 bp CCCCTGGCGCAGCCACGTACACTTCTGGTTGAGAGATTTGGTATTTaGTTGGTGGCTCTGCAGAAAGGTGGGAGAGAGAAGACGGAGACA +
Preference number: 5 (lower is better)
Translates to: PLAQPRTLLVERFGI*LVALQKGGREKTET
Trigger: TGTCTCCGTCTTCTCTCTCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CCA 90 bp CTGCCGTTGAAGAGAGGCGTGTTGTTATCCTCACCAGCGGGGTGTTaGAGTTCATGGAGGAGCTGGACTCAGCCGAAACTTTTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: LPLKRGVLLSSPAGC*SSWRSWTQPKLFSH
Trigger: ATGGGAGAAAAGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAACGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682904.1
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCGACTCAGGCTTGGCGTaGCCTCCACCAAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLDSGLA*PPPNFA
Trigger: AGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTC...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCAGAAAGGACTCAGGCTaGGCGTTGCCTCCACCAAAC +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLRKDSG*ALPPPN
Trigger: GTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCT...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TACCACGTCCACTTTACACAGATGACGCTTGGGAACCATGAGGATCATGCAAAGGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAA +
Preference number: 5 (lower is better)
Translates to: YHVHFTQMTLGNHEDHAKAEEWS*GLRRRQ
Trigger: TTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGC...CTTTGCATGATCCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAA +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVAEEWS*GLRRRQ
Trigger: TTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGCGACGAGCCCGGGGTaGCGGGGAGCAACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: SCQREAHSAIISTKVCPQATSPG*RGATPN
Trigger: GTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGC...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp GTCCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCACAGTATGGTGCTCTCTaGTTGTTACTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: VHSQYARQVRGVTWWLVAQYGAL*LLLFSL
Trigger: CAGTGAGAACAGTAACAACAAGAGAGCACCATACTG...TGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp CGGCACAGGATGACTGTTACCACCATACAGGCGATTAAGAAGACCCCTATGCAGCGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: RHRMTVTTIQAIKKTPMQRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...CTGCATAGGGGTCTTCTTAATCGCCTGTATGGTGGTAACAGTCATCCTGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCCACTGTGGAGGCATTaGCCGGCAGTCCGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: RPAAREKHILLSFQLRSVPLWRH*PAVRLG
Trigger: TCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTGG...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTTTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: PQPVRTAGERGYMVACGSLETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSTVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSTVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGAGGCTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 5 (lower is better)
Translates to: TSTLSPTGPQPVRTAGERLVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...CCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTTCTGGTTGAGAGATTaGGTATTTGGTTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCFWLRD*VFGWWL
Trigger: GAGCCACCAACCAAATACCAAATCTCTCAACCAGAA...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CAA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTAGGTCCCTCCCTAGGTaGTGCTTGGGTTTTGACACT +
Preference number: 5 (lower is better)
Translates to: GERGYMVACGSPLLQKPSRSLPR*CLGFDT
Trigger: AGTGTCAAAACCCAAGCACAACCTAGGGAGGGACCT...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CAA 90 bp AGCGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGGGTTTATTCTCAGGTTaGAAAGTCAGGAAAGTAGAC +
Preference number: 5 (lower is better)
Translates to: SGERQGPRDTAWRRRVDKGLFSG*KVRKVD
Trigger: GTCTACTTTCCTGACTTTCAAACCTGAGAATAAACC...CTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR CAA 90 bp GCGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAGGTTTATTCTCAGGTTaGAAAGTCAGGAAAGTAGAC +
Preference number: 5 (lower is better)
Translates to: AGKGKGRGTQHGAEESTRGLFSG*KVRKVD
Trigger: GTCTACTTTCCTGACTTTCAAACCTGAGAATAAACC...TCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS TCA 90 bp GGCATCTCTAGCGACTCCCCTGGCGCAGCCACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTTGGTGGCTCTTCTGGCTCTAATGTG +
Preference number: 5 (lower is better)
Translates to: GISSDSPGAATYTSG*EIWYLVGGSSGSNV
Trigger: CACATTAGAGCCAGAAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCAGGGGAGTCGCTAGAGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636922.1
CDS GCA 90 bp TGCAAAACACAGACACAGCCATACAGCAGGGTACGGGTGCAGTGCTaGTCATCTAGGTCTCAGAGATCCAAGGTTGGGGGCCACCATAAA +
Preference number: 5 (lower is better)
Translates to: CKTQTQPYSRVRVQC*SSRSQRSKVGGHHK
Trigger: TTTATGGTGGCCCCCAACCTTGGATCTCTGAGACCTAGATGAGCAGCACTGCACCCGTACCCTGCTGTATGGCTGTGTCTGTGTTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 90 bp GTGTGCGTGCATGGTGTGTGTGTATGCACGGTGTGTGTGTGTACATaGTGTGTGCGTGCACGGTGTGTGCATGTGCTTTCAGATAGCTTG +
Preference number: 5 (lower is better)
Translates to: VCVHGVCVCTVCVCT*CVRARCVHVLSDSL
Trigger: CAAGCTATCTGAAAGCACATGCACACACCGTGCACGCACACACCATGTACACACACACACCGTGCATACACACACACCATGCACGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 90 bp AAGAGAGGCGTGTTGTTATCCTCACCAGCGGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCGAAACTTTTCTCCCATAGCGAGTCT +
Preference number: 5 (lower is better)
Translates to: KRGVLLSSPAGCWSS*RSWTQPKLFSHSES
Trigger: AGACTCGCTATGGGAGAAAAGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACACGCCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682904.1
CDS-3UTR CAA 90 bp CAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAAGCGACGAGCCCGGGGTaGCGGGGAGCAACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: QNVRHFIPRPLYTDDAWEATSPG*RGATPN
Trigger: GTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGC...TTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGCGACGAGCCCGGGGTaGCGGGGAGCAACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYATSPG*RGATPN
Trigger: GTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCAGCCAGCCTGCTGCTGCAGTCACTaGAATGGCAACGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: LSCDGSEGPSTFTFFQPACCCSH*NGNAPP
Trigger: CGGAGGAGCGTTGCCATTCAAGTGACTGCAGCAGCA...GGCTGGCTGGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp CAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTATGGTGCTCTCTTGTaGTTACTGTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: QYARQVRGVTWWLVAVHCYGALL*LLFSLT
Trigger: TGTCAGTGAGAACAGTAACAACAAGAGAGCACCATA...GCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCCCACTGTGGAGGCATTaGCCGGCAGTCCGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: CRYEAGSFGEVLPELDESPLWRH*PAVRLG
Trigger: TCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTGG...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACCACTGTGGAGGCATTaGCCGGCAGTCCGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: LKILTGVSNAKESGSHYQPLWRH*PAVRLG
Trigger: TCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTGG...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCCTGAAGTCTGGCTTCTaGGTCGTGTTCTTCATTCGG +
Preference number: 5 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSLKSGF*VVFFIR
Trigger: CCGAATGAAGAACACGACCAAGAAGCCAGACTTCAG...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTACCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTTTCCGCCATGACCACTaGCCCAAAGCAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGSQCCPVWGQADTVIHVFRHDH*PKATFS
Trigger: GGAGAAGGTTGCTTTGGGCAAGTGGTCATGGCGGAA...AACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 5 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: ARQVRGVTWWLVAVHCSRNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...TCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACCACGTACACTTCTGGTaGAGAGATTTGGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: QGPRDTAWRRRVDKKTGDHVHFW*RDLVFG
Trigger: ACCAAATACCAAATCTCTCAACCAGAAGTGTACGTG...GTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS-3UTR CAA 90 bp CGCACGTCCACCTTGAGTCCTACTGGTCCACAGCCAGTACGCACGGCAGGTGAGTCCAAGTATTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: RTSTLSPTGPQPVRTAGESKYSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAATACTTGGA...CTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGAAAGGCAAGGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACGGCAGTTACTTACTCTaGTTGTTACTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: GKARAAGHSMAQKSRQEDGSYLL*LLLFSL
Trigger: CAGTGAGAACAGTAACAACAAGAGTAAGTAACTGCC...GTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCCTTGCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS TCA 90 bp GCTCTGCAAAGTCAGGAGCCCTCAGCCAGGCAGCCAGACACCCTCTaGTCCAAAGCCCTCTCCATACTCAGAATAATGTTCTTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ALQSQEPSARQPDTL*SKALSILRIMFFLS
Trigger: TGAGAGAAAGAACATTATTCTGAGTATGGAGAGGGCTTTGGATCAGAGGGTGTCTGGCTGCCTGGCTGAGGGCTCCTGACTTTGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS GCA 90 bp GCCAGAGCCCACTATCTTCAACCCTACTCTCCACTGCTAAGAAGATaGAGCTTCTCCACGAGGTTGGAATCCGTACCTTCCACCAATCTG +
Preference number: 5 (lower is better)
Translates to: ARAHYLQPYSPLLRR*SFSTRLESVPSTNL
Trigger: CAGATTGGTGGAAGGTACGGATTCCAACCTCGTGGAGAAGCTGCATCTTCTTAGCAGTGGAGAGTAGGGTTGAAGATAGTGGGCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 90 bp CCATGGTTACGGTACCAATCCCCGGTCCTCTTCCATATCTCCATGTaGACGTTAATCCCATCTGCACACTTCCTCTACGGGCATGGACTA +
Preference number: 5 (lower is better)
Translates to: PWLRYQSPVLFHISM*TLIPSAHFLYGHGL
Trigger: TAGTCCATGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTCCACATGGAGATATGGAAGAGGACCGGGGATTGGTACCGTAACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000336553.10
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000491111.1
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
ENST00000684153.1
CDS CCA 90 bp CACAGGCTTGGCACATGCTCGTTTTGTTCTTTCCTCTTCGCTGTCTaGTCACCCAGGTGTCCGCATCTTCTGTCTGGATATCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: HRLGTCSFCSFLFAV*SPRCPHLLSGYLTL
Trigger: GAGAGTCAGATATCCAGACAGAAGATGCGGACACCTGGGTGACCAGACAGCGAAGAGGAAAGAACAAAACGAGCATGTGCCAAGCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS CCA 90 bp ACAGATGGGAAGGAGGGAGAGGAGAGAACGTCCAACAAAGGTCAGTaGAGGCCTGCTTATTCCCAGGAGAAGCTGTTCTTGCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: TDGKEGEERTSNKGQ*RPAYSQEKLFLLCK
Trigger: TTTGCAGAGCAAGAACAGCTTCTCCTGGGAATAAGCAGGCCTCCACTGACCTTTGTTGGACGTTCTCTCCTCTCCCTCCTTCCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CCA 90 bp CGCAGCCACGTACACTTCTGGTTGAGAGATTTGGTATTTGGTTGGTaGCTCTGCAGAAAGGTGGGAGAGAGAAGACGGAGACAGATGGGA +
Preference number: 5 (lower is better)
Translates to: RSHVHFWLRDLVFGW*LCRKVGERRRRQMG
Trigger: TCCCATCTGTCTCCGTCTTCTCTCTCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CCA 90 bp TGGCGCAGCCACGTACACTTCTGGTTGAGAGATTTGGTATTTGGTTaGTGGCTCTGCAGAAAGGTGGGAGAGAGAAGACGGAGACAGATG +
Preference number: 5 (lower is better)
Translates to: WRSHVHFWLRDLVFG*WLCRKVGERRRRQM
Trigger: CATCTGTCTCCGTCTTCTCTCTCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CCA 90 bp AAACGAGATACATCAGGAGAGGTATTACTGGTGTGGCAAGTCCACTaGGGCACCGGCAGGAAAGACAACAGCCCTTACAGTTCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: KRDTSGEVLLVWQVH*GTGRKDNSPYSSLV
Trigger: CACCAACGAACTGTAAGGGCTGTTGTCTTTCCTGCCGGTGCCCCAGTGGACTTGCCACACCAGTAATACCTCTCCTGATGTATCTCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 90 bp TTGGCGTCAATCTGTAATGGCAATTTTCAATGGTTCGAGAAGTTCTaGAAACACCGATTCTCTACTGGCCACGATGGGGCCAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: LASICNGNFQWFEKF*KHRFSTGHDGARRG
Trigger: CCCCCGCCTGGCCCCATCGTGGCCAGTAGAGAATCGGTGTTTCCAGAACTTCTCGAACCATTGAAAATTGCCATTACAGATTGACGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS-3UTR CAA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCAACTTTGCTCGCGAGTaGCGAAGGCTCAGAGCGCGC +
Preference number: 5 (lower is better)
Translates to: CRYEAGSFGEVLPELDESNFARE*RRLRAR
Trigger: GCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTT...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTAAGAAAGGACTCAGGCTaGGCGTTGCCTCCACCAAAC +
Preference number: 5 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLRKDSG*ALPPPN
Trigger: GTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCT...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAA +
Preference number: 5 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCAEEWS*GLRRRQ
Trigger: TTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGC...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAA +
Preference number: 5 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRAEEWS*GLRRRQ
Trigger: TTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGC...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTGCTGCTGCAGTCACTaGAATGGCAACGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVCCCSH*NGNAPP
Trigger: CGGAGGAGCGTTGCCATTCAAGTGACTGCAGCAGCA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTAGAACCTCAATCTCTTaGTCCGTGGTGTTAACACCG +
Preference number: 5 (lower is better)
Translates to: GERGYMVACGSPLLQKPSRTSIS*SVVLTP
Trigger: CGGTGTTAACACCACGGACAAAGAGATTGAGGTTCT...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCTGGAGCCATCCACTaGACTGGAAGCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVSGAIH*TGSRPL
Trigger: CAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAGA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCTCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: RPAAREKHILLSFQLRSVERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTATGAGGCTGGATCTTTaGGTGAGGTCCTGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPMRLDL*VRSCQN
Trigger: ATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCAT...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACAGCCAGTACGCACGGCAGGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTTCCAAGTATTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: PQPVRTAGERGYMVACGSSKYSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAATACTTGGA...ACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCGCCAGCACTTCTGCATaGGAACTATTTATCCCCGAG +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLASTSA*ELFIPE
Trigger: CTCGGGGATAAATAGTTCCAATGCAGAAGTGCTGGC...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp GTCAGGAAAGTAGACACAGCGGGGAAAGGCAAGGGCCGCGGGACACAGCATGGCAGTTACTTACTCTTGTaGTTACTGTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: VRKVDTAGKGKGRGTQHGSYLLL*LLFSLT
Trigger: TGTCAGTGAGAACAGTAACAACAAGAGTAAGTAACT...GCCATGCTGTGTCCCGCGGCCCTTGCCTTTCCCCGCTGTGTCTACTTTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS-3UTR CAA 90 bp GGGCCGCGGGACACAGCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGAGTTACTTACTCTTGTaGTTACTGTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: GPRDTAWRRRVDKKTGDRSYLLL*LLFSLT
Trigger: TGTCAGTGAGAACAGTAACAACAAGAGTAAGTAACT...CCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGCTGTGTCCCGCGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS TCA 90 bp CTGGAGGGGTTGAGGCAGGAGGCAGAGAGACTCCTTTCAAAGCACTaGTTCTATTGCACCAGGCACACGTCACAAACACAACATAACTCC +
Preference number: 5 (lower is better)
Translates to: LEGLRQEAERLLSKH*FYCTRHTSQTQHNS
Trigger: GGAGTTATGTTGTGTTTGTGACGTGTGCCTGGTGCAATAGAATCAGTGCTTTGAAAGGAGTCTCTCTGCCTCCTGCCTCAACCCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS TCA 90 bp GGGTCCTGGGCTCTTCTCACAGGGAACCAGAGGACCTGTCCTGTTTaGAAAGCTTTGAATCTCGCCTTTGTAAACCCAGACTTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: GSWALLTGNQRTCPV*KALNLAFVNPDFPQ
Trigger: TTGAGGGAAGTCTGGGTTTACAAAGGCGAGATTCAAAGCTTTTCAAACAGGACAGGTCCTCTGGTTCCCTGTGAGAAGAGCCCAGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 90 bp CACGTACACTTCTGGTTGAGAGATTTGGTATTTGGTTGGTGGCTCTaGAGAAAGGTGGGAGAGAGAAGACGGAGACAGATGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: HVHFWLRDLVFGWWL*RKVGERRRRQMGRR
Trigger: CCTCCTTCCCATCTGTCTCCGTCTTCTCTCTCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CCA 90 bp CGTTCCCTTCTCTTAGTCCAACTGGGCTTTAGAAAGCTAAACTGTTaGAGGAGTCTGCTCACAGCTCCGTATTTCTGCTGGGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RSLLLVQLGFRKLNC*RSLLTAPYFCWAGG
Trigger: ACCTCCAGCCCAGCAGAAATACGGAGCTGTGAGCAGACTCCTCCAACAGTTTAGCTTTCTAAAGCCCAGTTGGACTAAGAGAAGGGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 90 bp AAGAGAGGCGTGTTGTTATCCTCACCAGCGGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCGAAACCTGGATACAAAATGCAAAGA +
Preference number: 5 (lower is better)
Translates to: KRGVLLSSPAGCWSS*RSWTQPKPGYKMQR
Trigger: TCTTTGCATTTTGTATCCAGGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACACGCCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS-3UTR CAA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAAACTTTGCTCGCGAGTaGCGAAGGCTCAGAGCGCGC +
Preference number: 5 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVNFARE*RRLRAR
Trigger: GCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTT...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGAACTTTGCTCGCGAGTaGCGAAGGCTCAGAGCGCGC +
Preference number: 5 (lower is better)
Translates to: VCYSTSVPFSPAQLTFSENFARE*RRLRAR
Trigger: GCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTT...CTCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGCLHQT*LASCEG
Trigger: GCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTGCTGCTGCAGTCACTaGAATGGCAACGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGCCCSH*NGNAPP
Trigger: CGGAGGAGCGTTGCCATTCAAGTGACTGCAGCAGCA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTCGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCACCTTTTTCCGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: SNDFLVMEVKGPQHSPFSAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...GGAAAAAGGTGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATCCACTGTGGAGGCATTaGCCGGCAGTCCGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYPLWRH*PAVRLG
Trigger: TCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTGG...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTCCACTGTGGAGGCATTaGCCGGCAGTCCGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVPLWRH*PAVRLG
Trigger: TCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTGG...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGIRLVS*CTAGWL
Trigger: CAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTAT...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCTTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: RPAAREKHILLSFQLRSVLKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCTTCCGCCATGACCACTaGCCCAAAGCAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RPAAREKHILLSFQLRSVFRHDH*PKATFS
Trigger: GGAGAAGGTTGCTTTGGGCAAGTGGTCATGGCGGAA...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLTVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCTCTGGAGCCATCCACTaGACTGGAAGCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: CRYEAGSFGEVLPELDESSGAIH*TGSRPL
Trigger: CAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAGA...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTTCTGGAGCCATCCACTaGACTGGAAGCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTSGAIH*TGSRPL
Trigger: CAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAGA...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGTCTGGAGCCATCCACTaGACTGGAAGCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKSGAIH*TGSRPL
Trigger: CAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAGA...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCATGGCGCAGAAGAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCATTCTGGTTGAGAGATTaGGTATTTGGTTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: AWRRRVDKKTGDRQNFPPFWLRD*VFGWWL
Trigger: GAGCCACCAACCAAATACCAAATCTCTCAACCAGAA...TGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTCTTCTGCGCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613324.4
CDS TCA 90 bp CATCGGAGCCGGGCAGTTACTTACTCTTGTTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCATCGGTGTCATCCTCATCATCTCCGG +
Preference number: 5 (lower is better)
Translates to: HRSRAVTYSCCYCSH*QNLPHHRCHPHHLR
Trigger: CCGGAGATGATGAGGATGACACCGATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACAACAAGAGTAAGTAACTGCCCGGCTCCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491475.1
ENST00000611527.1
ENST00000613324.4
ENST00000636922.1
ENST00000683035.1
CDS TCA 90 bp AGAAAGACACAGCTATGTGTTTTCCCTGGTAACCCTGGGCCACAGTaGCATCTCACAATGGCGTCACACCCTAAAGATGCTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RKTQLCVFPGNPGPQ*HLTMASHPKDALEA
Trigger: AGCCTCCAAAGCATCTTTAGGGTGTGACGCCATTGTGAGATGTCACTGTGGCCCAGGGTTACCAGGGAAAACACATAGCTGTGTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS TCA 90 bp TTGGGGGCCATTCTTTGTTTCTCCCCAGTCCTTCTGGAAACTTATTaGTGGCCAGGCTATTCAGTGGAAATGGGCTGCCTCTTGTCTTCG +
Preference number: 5 (lower is better)
Translates to: LGAILCFSPVLLETY*WPGYSVEMGCLLSS
Trigger: CGAAGACAAGAGGCAGCCCATTTCCACTGAATAGCCTGGCCATCAATAAGTTTCCAGAAGGACTGGGGAGAAACAAAGAATGGCCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 90 bp GGATCCCCTTCACTTAGCAGCCAGACTCAGGGTACAATCAGGAATTaGAATCGCTGCATCCAAACACCTACCCCAATTAGCCTTCACGCT +
Preference number: 5 (lower is better)
Translates to: GSPSLSSQTQGTIRN*NRCIQTPTPISLHA
Trigger: AGCGTGAAGGCTAATTGGGGTAGGTGTTTGGATGCAGCGATTTCAATTCCTGATTGTACCCTGAGTCTGGCTGCTAAGTGAAGGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 90 bp TTTCAGTCTTCCGCCAAGCAGCCACTTACGAAGAGTGAACACAACTaGAGCGCATTCAACGCAGCTGATCCAAAAAGGACTTCGAAGCCT +
Preference number: 5 (lower is better)
Translates to: FQSSAKQPLTKSEHN*SAFNAADPKRTSKP
Trigger: AGGCTTCGAAGTCCTTTTTGGATCAGCTGCGTTGAATGCGCTGCAGTTGTGTTCACTCTTCGTAAGTGGCTGCTTGGCGGAAGACTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS GCA 90 bp CAAGAAAAGTATGTGTGCAGTGTGTGTGTGTGTACACGGTGTGTGTaGGTGCATGGTGTGTGTGTATGCACGGTGTGTGTGTGTACATGG +
Preference number: 5 (lower is better)
Translates to: QEKYVCSVCVCTRCV*VHGVCVCTVCVCTW
Trigger: CCATGTACACACACACACCGTGCATACACACACACCATGCACGCACACACACCGTGTACACACACACACACTGCACACATACTTTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS GCA 90 bp GGAGTTCATGGAGGAGCTGGACTCAGCCGAAACCTGGATACAAAATaGAAAGACACAGATGTAATCCTGGCTCCATCTGAGAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GVHGGAGLSRNLDTK*KDTDVILAPSEKAG
Trigger: TCCAGCCTTCTCAGATGGAGCCAGGATTACATCTGTGTCTTTGCATTTTGTATCCAGGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp TCTCCCCAGTCCTTCTGGAAACTTATTGATGGCCAGGCTATTCAGTaGAAATGGGCTGCCTCTTGTCTTCGGTTTCAGAAACCAGTGCAC +
Preference number: 5 (lower is better)
Translates to: SPQSFWKLIDGQAIQ*KWAASCLRFQKPVH
Trigger: GTGCACTGGTTTCTGAAACCGAAGACAAGAGGCAGCCCATTTCCACTGAATAGCCTGGCCATCAATAAGTTTCCAGAAGGACTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp TTCATTAGTGCCTTTATGGTTGTACCTGCACCTGTACTGGAGCCCTaGATAATGGATCCCCTCTCAGACCACCCGGATCATGGATCAATG +
Preference number: 5 (lower is better)
Translates to: FISAFMVVPAPVLEP*IMDPLSDHPDHGSM
Trigger: CATTGATCCATGATCCGGGTGGTCTGAGAGGGGATCCATTATCCAGGGCTCCAGTACAGGTGCAGGTACAACCATAAAGGCACTAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp GTGTTGTTATCCTCACCAGCGGGGTGTTGGAGTTCATGGAGGAGCTaGACTCAGCCGAAACCTGGATACAAAATGCAAAGACACAGATGT +
Preference number: 5 (lower is better)
Translates to: VLLSSPAGCWSSWRS*TQPKPGYKMQRHRC
Trigger: ACATCTGTGTCTTTGCATTTTGTATCCAGGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS-3UTR CAA 90 bp TTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCATGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: LVPSNDFLVMEVKGPQHSCLHQT*LASCEG
Trigger: GCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCA...TGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGACGGTACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTAGAAAGGACTCAGGCTaGGCGTTGCCTCCACCAAAC +
Preference number: 5 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTRKDSG*ALPPPN
Trigger: GTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCT...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTAGAAAGGACTCAGGCTaGGCGTTGCCTCCACCAAAC +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGRKDSG*ALPPPN
Trigger: GTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCT...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAA +
Preference number: 5 (lower is better)
Translates to: SSPIITKLTRKAERTSTLAEEWS*GLRRRQ
Trigger: TTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGC...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGCGACGAGCCCGGGGTaGCGGGGAGCAACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALATSPG*RGATPN
Trigger: GTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGC...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGCTGCTGCAGTCACTaGAATGGCAACGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVCCCSH*NGNAPP
Trigger: CGGAGGAGCGTTGCCATTCAAGTGACTGCAGCAGCA...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTGCTGCTGCAGTCACTaGAATGGCAACGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: YYKINKEGRTHVHLESYWCCCSH*NGNAPP
Trigger: CGGAGGAGCGTTGCCATTCAAGTGACTGCAGCAGCA...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTATGGTGCTCTCTTGTaGTTACTGTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: GERGYMVACGSPLLQKPSYGALL*LLFSLT
Trigger: TGTCAGTGAGAACAGTAACAACAAGAGAGCACCATA...AGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp GCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTCGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: ASFKRTLVPFILGSPVRRRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: SSPIITKLTRKAERTSTLAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: EWIKASFKRTLVPFILGSAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SCQREAHSAIISTKVCPQIRLVS*CTAGWL
Trigger: CAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTAT...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAACCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: AREKHILLSFQLRSVLKEPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGCCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTCCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCTTCCGCCATGACCACTaGCCCAAAGCAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CRYEAGSFGEVLPELDESFRHDH*PKATFS
Trigger: GGAGAAGGTTGCTTTGGGCAAGTGGTCATGGCGGAA...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTTCCGCCATGACCACTaGCCCAAAGCAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGFRHDH*PKATFS
Trigger: GGAGAAGGTTGCTTTGGGCAAGTGGTCATGGCGGAA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGTTCCGCCATGACCACTaGCCCAAAGCAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TGVSNAKESGSHYQNSLKFRHDH*PKATFS
Trigger: GGAGAAGGTTGCTTTGGGCAAGTGGTCATGGCGGAA...CTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: VICIHLARLLQSEWVFPKERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTCCACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: GLHGGLWQSTAPETFFSSTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...GGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 5 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAGTCGACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCATGCTCCTCTCTCGGGCAGTTACTTACTCTaGTTGTTACTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: ESTRRQVTGRTSLHAPLSGSYLL*LLLFSL
Trigger: CAGTGAGAACAGTAACAACAAGAGTAAGTAACTGCC...CGAGAGAGGAGCATGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTCGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611527.1
ENST00000613324.4
CDS TCA 90 bp CTGTGTTGGTCCAGTATGGTGCTCTCTTGTTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCATCGGTGTCATCCTCATCATCTCCGG +
Preference number: 5 (lower is better)
Translates to: LCWSSMVLSCCYCSH*QNLPHHRCHPHHLR
Trigger: CCGGAGATGATGAGGATGACACCGATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACAACAAGAGAGCACCATACTGGACCAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000336553.10
ENST00000346997.6
ENST00000351936.11
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369056.5
ENST00000369058.7
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000613048.4
ENST00000683211.1
ENST00000683678.1
CDS TCA 90 bp CATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAACCATaGGGATCATGCAAAGCTCATAAACCCTGGCTGCCCACAACATCC +
Preference number: 5 (lower is better)
Translates to: HFIPRPLYTDDAWEP*GSCKAHKPWLPTTS
Trigger: GGATGTTGTGGGCAGCCAGGGTTTATGAGCTTTGCATGATCCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS TCA 90 bp GATAAAACAGTAGCTACAGGACTCAGATACGTGCAGCCACTTCAGTaGGGCAATGTGTGCTCTCTTCTACTATCCACTATCGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: DKTVATGLRYVQPLQ*GNVCSLLLSTIAST
Trigger: GGTGGAGGCGATAGTGGATAGTAGAAGAGAGCACACATTGCCTCACTGAAGTGGCTGCACGTATCTGAGTCCTGTAGCTACTGTTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
CDS TCA 90 bp GCCAGGAGAGAAGAAGAGGAAGGAGGAGAAAGAAGGAACAGGGGCTaGATTCCTTCCTTTGAATCCAGTTGCATTTGCAACCTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: ARREEEEGGERRNRG*IPSFESSCICNLGR
Trigger: TCTACCCAGGTTGCAAATGCAACTGGATTCAAAGGAAGGAATTCAGCCCCTGTTCCTTCTTTCTCCTCCTTCCTCTTCTTCTCTCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 90 bp CAGGTGAAACGGTGTGATTCACAGCAAAAGCAAGAAAAGTATGTGTaGAGTGTGTGTGTGTGTACACGGTGTGTGTGCGTGCATGGTGTG +
Preference number: 5 (lower is better)
Translates to: QVKRCDSQQKQEKYV*SVCVCTRCVCVHGV
Trigger: CACACCATGCACGCACACACACCGTGTACACACACACACACTGCACACATACTTTTCTTGCTTTTGCTGTGAATCACACCGTTTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 90 bp TGGGTTGGGGGCTGGCAGAAGTCAGAAACCAAATTAGAAAACCACTaGAATCTAACTCCTCTGCCCTCCAGTCCATGCAGTACCAGATTT +
Preference number: 5 (lower is better)
Translates to: WVGGWQKSETKLENH*NLTPLPSSPCSTRF
Trigger: AAATCTGGTACTGCATGGACTGGAGGGCAGAGGAGTTAGATTCCAGTGGTTTTCTAATTTGGTTTCTGACTTCTGCCAGCCCCCAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp GAAGTCAGCCAGAGCCCAGCCAGAGTATCGAATCTTAGAAAGGAATaGGTTGGGGGCTGGCAGAAGTCAGAAACCAAATTAGAAAACCAC +
Preference number: 5 (lower is better)
Translates to: EVSQSPARVSNLRKE*VGGWQKSETKLENH
Trigger: GTGGTTTTCTAATTTGGTTTCTGACTTCTGCCAGCCCCCAACCCATTCCTTTCTAAGATTCGATACTCTGGCTGGGCTCTGGCTGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp ACAGGGGCTGAATTCCTTCCTTTGAATCCAGTTGCATTTGCAACCTaGGTAGACATTTGGCTCTGGGTGTTGAATGCCCATAAACGCACC +
Preference number: 5 (lower is better)
Translates to: TGAEFLPLNPVAFAT*VDIWLWVLNAHKRT
Trigger: GGTGCGTTTATGGGCATTCAACACCCAGAGCCAAATGTCTACCCAGGTTGCAAATGCAACTGGATTCAAAGGAAGGAATTCAGCCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS-3UTR CAA 90 bp TTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGAAGGGCCCTCAACATTCAGACTCAGGCTTGGCGTaGCCTCCACCAAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: LVPSNDFLVMEVKGPQHSDSGLA*PPPNFA
Trigger: AGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTC...TGAATGTTGAGGGCCCTTCACTTCCATCACAAGAAAGTCATTAGACGGTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGACTCAGGCTTGGCGTaGCCTCCACCAAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: SCQREAHSAIISTKVCPQDSGLA*PPPNFA
Trigger: AGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTC...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp GTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGAGAAAGGACTCAGGCTaGGCGTTGCCTCCACCAAAC +
Preference number: 5 (lower is better)
Translates to: VCYSTSVPFSPAQLTFSERKDSG*ALPPPN
Trigger: GTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCT...CTCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp GTTTGGGGACAGGCAGACACAGTCATTCATGTTTTAACACTGCCGTTTATGTGTAGAAAGGACTCAGGCTaGGCGTTGCCTCCACCAAAC +
Preference number: 5 (lower is better)
Translates to: VWGQADTVIHVLTLPFMCRKDSG*ALPPPN
Trigger: GTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCT...ACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCATGCTGCTGCAGTCACTaGAATGGCAACGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: WIKASFKRTLVPFILGSPCCCSH*NGNAPP
Trigger: CGGAGGAGCGTTGCCATTCAAGTGACTGCAGCAGCA...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCGCTGGGCAGCGAAACTaGACAGTGTTGGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: KSSPIITKLTRKAERTSTAGQRN*TVLAAG
Trigger: GCCTGCGGCCAACACTGTCAAGTTTCGCTGCCCAGC...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTCTGAAGTCTGGCTTCTaGGTCGTGTTCTTCATTCGG +
Preference number: 5 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPLKSGF*VVFFIR
Trigger: CCGAATGAAGAACACGACCAAGAAGCCAGACTTCAG...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVIRLVS*CTAGWL
Trigger: CAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTAT...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQIRLVS*CTAGWL
Trigger: CAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTAT...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMLKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: CRYEAGSFGEVLPELDESTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTTVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCCATGACACCAAGTCCTaGAAGGTCATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVHDTKS*KVICSS
Trigger: TGAGGAGCAGATGACCTTCAAGGACTTGGTGTCATG...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACATGACACCAAGTCCTaGAAGGTCATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPHDTKS*KVICSS
Trigger: TGAGGAGCAGATGACCTTCAAGGACTTGGTGTCATG...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 5 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 5 (lower is better)
Translates to: RPAAREKHILLSFQLRSVSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: WIKASFKRTLVPFILGSPERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...TGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCATGAGGCTGGATCTTTaGGTGAGGTCCTGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVMRLDL*VRSCQN
Trigger: ATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCAT...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAATGAGGCTGGATCTTTaGGTGAGGTCCTGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPMRLDL*VRSCQN
Trigger: ATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCAT...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTACATCTTGCACGGCTATaGCAAAGTGAGTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLHLARL*QSEWVF
Trigger: AAACACCCACTCACTTTGCAATAGCCGTGCAAGATG...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTCAGTGTAGCTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTTCCAAGTATTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: LSVARFPVLSCLGTGRHSSKYSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAATACTTGGA...ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAGCTACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCCTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 5 (lower is better)
Translates to: FLIGCESENSIQVFYQLLPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...AAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTTTCTCTTCCAGGCGCTaGCTGTTTTGGCAGGACAGT +
Preference number: 5 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTFSSRR*LFWQDS
Trigger: ACTGTCCTGCCAAAACAGCAAGCGCCTGGAAGAGAA...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369059.5
CDS TCA 90 bp TGGAGACCTTACATATATATTCCCCAGCATCCGCCTCGGTCACATTaGACAGAGCCAGCACTTCTGCATTGGAACTATTTATCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: WRPYIYIPQHPPRSH*TEPALLHWNYLSPS
Trigger: ACTCGGGGATAAATAGTTCCAATGCAGAAGTGCTGGCTCTGTTCAATGTGACCGAGGCGGATGCTGGGGAATATATATGTAAGGTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360144.7
ENST00000369056.5
ENST00000369058.7
ENST00000369059.5
ENST00000457416.6
ENST00000463870.5
ENST00000490349.5
ENST00000604236.5
CDS TCA 90 bp TGCTTACAAACGCCTTCAATCACACTGGCAAAGACTGAGTCCAGATaGACAAATTTAGGTGGGATGAACTTTCACAGGGTGGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CLQTPSITLAKTESR*TNLGGMNFHRVGPG
Trigger: CCCAGGACCCACCCTGTGAAAGTTCATCCCACCTAAATTTGTTCATCTGGACTCAGTCTTTGCCAGTGTGATTGAAGGCGTTTGTAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 90 bp CGCTGCATCCAAACACCTACCCCAATTAGCCTTCACGCTTGCTCTTaGAACCTGTTGTCAAAGGTAGAGCTGAGATTTCTTTACAAGGCC +
Preference number: 5 (lower is better)
Translates to: RCIQTPTPISLHACS*NLLSKVELRFLYKA
Trigger: GGCCTTGTAAAGAAATCTCAGCTCTACCTTTGACAACAGGTTTCAAGAGCAAGCGTGAAGGCTAATTGGGGTAGGTGTTTGGATGCAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 90 bp ATCATTAATTGTGGAGCTGAGATCCTCACACCCAAGTGTCTGGGTTaGACAAGCAAATGGCAGAAGCAAGCGGGAAAAGACGAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: IINCGAEILTPKCLG*TSKWQKQAGKDEKV
Trigger: TACCTTCTCGTCTTTTCCCGCTTGCTTCTGCCATTTGCTTGTGCAACCCAGACACTTGGGTGTGAGGATCTCAGCTCCACAATTAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp AATACACCTTTTCCCATAACCACACAAGAGAACTCCTCTCCCACCTaGCAGTACACAGGGCTCCACCGAGTTACTTTCTTGTTTATCCTG +
Preference number: 5 (lower is better)
Translates to: NTPFPITTQENSSPT*QYTGLHRVTFLFIL
Trigger: CAGGATAAACAAGAAAGTAACTCGGTGGAGCCCTGTGTACTGCCAGGTGGGAGAGGAGTTCTCTTGTGTGGTTATGGGAAAAGGTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp GTCAAAGTGATGGGATTTAGGTGCACCCATATGATGCTGAAACAGTaGGAAGAGGGGCAAAACTATCGAAGCCAGGAGAGAAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: VKVMGFRCTHMMLKQ*EEGQNYRSQERRRG
Trigger: TCCTCTTCTTCTCTCCTGGCTTCGATAGTTTTGCCCCTCTTCCCACTGTTTCAGCATCATATGGGTGCACCTAAATCCCATCACTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS-3UTR CAA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: NYYKINKEGRTHVHLESYCLHQT*LASCEG
Trigger: GCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCA...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTTGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: EWIKASFKRTLVPFILGSCLHQT*LASCEG
Trigger: GCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCA...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGACTCAGGCTTGGCGTaGCCTCCACCAAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYDSGLA*PPPNFA
Trigger: AGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTCATTGGTTGTGAGAGTGAGAATTCGATCCAAGTCTTCTACCAACTGCTTGAAGACTCAGGCTTGGCGTaGCCTCCACCAAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: LIGCESENSIQVFYQLLEDSGLA*PPPNFA
Trigger: AGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTC...TTCAAGCAGTTGGTAGAAGACTTGGATCGAATTCTCACTCTCACAACCAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp TCTATGATGGGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGCAGTATGGTGCTCTCTaGTTGTTACTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: SMMGLEDPNRRLQRQRVWQYGAL*LLLFSL
Trigger: CAGTGAGAACAGTAACAACAAGAGAGCACCATACTG...CCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATCTCAGCTTCCAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGCGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: VISASKMSDISYHVHFTQRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...CTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTGGAAGCTGAGATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAGAACCTCAATCTCTTaGTCCGTGGTGTTAACACCG +
Preference number: 5 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSRTSIS*SVVLTP
Trigger: CGGTGTTAACACCACGGACAAAGAGATTGAGGTTCT...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTAGGTATGAGGCTGGATCTTTTGGTGAGGTCCTGCCAGAATTAGATGAAAGCCTGAAGTCTGGCTTCTaGGTCGTGTTCTTCATTCGG +
Preference number: 5 (lower is better)
Translates to: CRYEAGSFGEVLPELDESLKSGF*VVFFIR
Trigger: CCGAATGAAGAACACGACCAAGAAGCCAGACTTCAG...GCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: THKISVICIHLARLLQSEIRLVS*CTAGWL
Trigger: CAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTAT...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAATTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQLKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTTTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVLKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: YYKINKEGRTHVHLESYWTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTCATGACACCAAGTCCTaGAAGGTCATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTHDTKS*KVICSS
Trigger: TGAGGAGCAGATGACCTTCAAGGACTTGGTGTCATG...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCCTTCGATGAATACATTTTaGGGAAGCCAAGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: RGYMVACGSPLLQKPSSPSMNTF*GSQVLH
Trigger: ATGGAGTACTTGGCTTCCCAAAAATGTATTCATCGA...AGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTCTGGAGCCATCCACTaGACTGGAAGCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: THKISVICIHLARLLQSESGAIH*TGSRPL
Trigger: CAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAGA...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCATCATGTACAGTTCGTaGGTGCAGTTGGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVIMYSS*VQLAGL
Trigger: TAAGCCAGCCAACTGCACCAACGAACTGTACATGAT...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAATCATGTACAGTTCGTaGGTGCAGTTGGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LEDPNRRLQRQRVWKPLSIMYSS*VQLAGL
Trigger: TAAGCCAGCCAACTGCACCAACGAACTGTACATGAT...TGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTATCATGTACAGTTCGTaGGTGCAGTTGGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPIMYSS*VQLAGL
Trigger: TAAGCCAGCCAACTGCACCAACGAACTGTACATGAT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTTCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: EWIKASFKRTLVPFILGSERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTAGGTTCCCAGTGCTGTCCTGTTTGGGGACAGGCAGACACAGTCATTCATGTTACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: LGSQCCPVWGQADTVIHVTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...AACATGAATGACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGGGAACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS-3UTR CAA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGCTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 5 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLLVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTGCTCCAGAAACCTTCTTCTCTCCAAGTATTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: RGVTWWLVAVHCSRNLLLSKYSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAATACTTGGA...GAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACCCAGTGCTGTCCTGTTaGGGGACAGGCAGACACAGT +
Preference number: 5 (lower is better)
Translates to: NYYKINKEGRTHVHLESYPVLSC*GTGRHS
Trigger: ACTGTGTCTGCCTGTCCCCAAACAGGACAGCACTGG...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATTCCGCCTCGGTCACATaGAACAGAGCCAGCACTTCT +
Preference number: 5 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYSASVT*NRASTS
Trigger: AGAAGTGCTGGCTCTGTTCAATGTGACCGAGGCGGA...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369059.5
ENST00000604236.5
CDS-3UTR CAA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGGCTCCCAAAGGCTTCTaGCTGGGGTCAGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRAPKGF*LGSVLR
Trigger: CCGCAGAACTGACCCCAGCAAGAAGCCTTTGGGAGC...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CAA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTGGAAGGTCACTGGTTaGTTGCCCTTTCTCCCTCAC +
Preference number: 5 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMWKVTG*LPFLPH
Trigger: GTGAGGGAGAAAGGGCAACAAACCAGTGACCTTCCA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS TCA 90 bp ATGAACAGGCAAAAATCACCACTCATTGCAGGGGGACCTTATGCTTaGGGATATCATGGGCAAGAAGCTCCAGCCAAACTAGTAAGAACC +
Preference number: 5 (lower is better)
Translates to: MNRQKSPLIAGGPYA*GYHGQEAPAKLVRT
Trigger: GGTTCTTACTAGTTTGGCTGGAGCTTCTTGCCCATGATATCCTCAAGCATAAGGTCCCCCTGCAATGAGTGGTGATTTTTGCCTGTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 90 bp CACCTACAGAGCTCAGAAAGATTCAGGAGCGGGTTTAACGGCCAATaGTGCTTCCCCAAATCTTTCTGTCCTCCTAATTCATTCTGCATC +
Preference number: 5 (lower is better)
Translates to: HLQSSERFRSGFNGQ*CFPKSFCPPNSFCI
Trigger: GATGCAGAATGAATTAGGAGGACAGAAAGATTTGGGGAAGCATCATTGGCCGTTAAACCCGCTCCTGAATCTTTCTGAGCTCTGTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 90 bp CCCAAATCTTTCTGTCCTCCTAATTCATTCTGCATCAGGGCCGTGTaGTGTGGATGCTTAAGTACGCAGGTGTTTTCAAGACTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: PKSFCPPNSFCIRAV*CGCLSTQVFSRLRR
Trigger: CCTTCTTAGTCTTGAAAACACCTGCGTACTTAAGCATCCACAGCACACGGCCCTGATGCAGAATGAATTAGGAGGACAGAAAGATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 90 bp ACATCAGAAGCCAGGAACTTTCAGAGAACATCAAGACTTCCAGTTTaGATTGGTCCACAGGAACATCTCAAGCTCCACCTACAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: TSEARNFQRTSRLPV*IGPQEHLKLHLQSS
Trigger: TGAGCTCTGTAGGTGGAGCTTGAGATGTTCCTGTGGACCAATGCAAACTGGAAGTCTTGATGTTCTCTGAAAGTTCCTGGCTTCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp AAAGAATCATTAATTGTGGAGCTGAGATCCTCACACCCAAGTGTCTaGGTTGCACAAGCAAATGGCAGAAGCAAGCGGGAAAAGACGAGA +
Preference number: 5 (lower is better)
Translates to: KESLIVELRSSHPSV*VAQANGRSKREKTR
Trigger: TCTCGTCTTTTCCCGCTTGCTTCTGCCATTTGCTTGTGCAACCCAGACACTTGGGTGTGAGGATCTCAGCTCCACAATTAATGATTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGAACTTTGCTCGCGAGTaGCGAAGGCTCAGAGCGCGC +
Preference number: 5 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALNFARE*RRLRAR
Trigger: GCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTT...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTTGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFCLHQT*LASCEG
Trigger: GCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCA...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAA +
Preference number: 5 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFAEEWS*GLRRRQ
Trigger: TTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGC...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000613048.4
CDS-3UTR CAA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGACGAAACTTGACAGTGTaGGCCGCAGGCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGRNLTV*AAGTAW
Trigger: CCATGCTGTGCCTGCGGCCAACACTGTCAAGTTTCG...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTAGAACCTCAATCTCTTaGTCCGTGGTGTTAACACCG +
Preference number: 5 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTRTSIS*SVVLTP
Trigger: CGGTGTTAACACCACGGACAAAGAGATTGAGGTTCT...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGIRLVS*CTAGWL
Trigger: CAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTAT...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTTTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: EWIKASFKRTLVPFILGSLKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVLETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTTTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPLETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCATTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPLETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCAGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGACCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTCCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQTVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 5 (lower is better)
Translates to: KILTGVSNAKESGSHYQNSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCACTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTATCATGTACAGTTCGTaGGTGCAGTTGGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: PLLQKPSSPPGEDYKFSTIMYSS*VQLAGL
Trigger: TAAGCCAGCCAACTGCACCAACGAACTGTACATGAT...AGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTGAACGCACGTCCACCTaGAGTCCTACTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFERTST*SPTGPQ
Trigger: CTGTGGACCAGTAGGACTCAAGGTGGACGTGCGTTC...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTGACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: LIHIYKWRQQALGGMVSLTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...CAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCATTCTGGTTGAGAGATTaGGTATTTGGTTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPFWLRD*VFGWWL
Trigger: GAGCCACCAACCAAATACCAAATCTCTCAACCAGAA...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CAA 90 bp GGACTTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTACACGTACACTTCTGGTaGAGAGATTTGGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: GLEDPNRRLQRQRVWKPLHVHFW*RDLVFG
Trigger: ACCAAATACCAAATCTCTCAACCAGAAGTGTACGTG...TAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR CAA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTAGCCAGCACTTCTGCATaGGAACTATTTATCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVASTSA*ELFIPE
Trigger: CTCGGGGATAAATAGTTCCAATGCAGAAGTGCTGGC...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369059.5
ENST00000604236.5
CDS-3UTR CAA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGTCCGCCTCGGTCACATaGAACAGAGCCAGCACTTCT +
Preference number: 5 (lower is better)
Translates to: SSPIITKLTRKAERTSTLSASVT*NRASTS
Trigger: AGAAGTGCTGGCTCTGTTCAATGTGACCGAGGCGGA...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604236.5
CDS TCA 90 bp CGCTCTTTCCTCCAAAATGGCAGTCTCTTAGCAACGCCAAAGAGCTaGAAAGGGAAAGAACATTCTGCGATTTGGAGGACAAGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: RSFLQNGSLLATPKS*KGKEHSAIWRTSEN
Trigger: GTTTTCACTTGTCCTCCAAATCGCAGAATGTTCTTTCCCTTTTCAGCTCTTTGGCGTTGCTAAGAGACTGCCATTTTGGAGGAAAGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682296.1
CDS TCA 90 bp GCACCAGGCACACGTCACAAACACAACATAACTCCACTTAAAGTGTaGGGCAGGTTTTGCTACAAACCAGTTCATGGTTTTACAGGCAGA +
Preference number: 5 (lower is better)
Translates to: APGTRHKHNITPLKV*GRFCYKPVHGFTGR
Trigger: TCTGCCTGTAAAACCATGAACTGGTTTGTAGCAAAACCTGCCTCACACTTTAAGTGGAGTTATGTTGTGTTTGTGACGTGTGCCTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS TCA 90 bp CTCCTGGATGTGCTTACAAACGCCTTCAATCACACTGGCAAAGACTaGGTCCAGATGAACAAATTTAGGTGGGATGAACTTTCACAGGGT +
Preference number: 5 (lower is better)
Translates to: LLDVLTNAFNHTGKD*VQMNKFRWDELSQG
Trigger: ACCCTGTGAAAGTTCATCCCACCTAAATTTGTTCATCTGGACTCAGTCTTTGCCAGTGTGATTGAAGGCGTTTGTAAGCACATCCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 90 bp TTCTGTCCTCCTAATTCATTCTGCATCAGGGCCGTGTGCTGTGGATaGTTAAGTACGCAGGTGTTTTCAAGACTAAGAAGGTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: FCPPNSFCIRAVCCG*LSTQVFSRLRRSSE
Trigger: TTCAGAAGACCTTCTTAGTCTTGAAAACACCTGCGTACTTAAGCATCCACAGCACACGGCCCTGATGCAGAATGAATTAGGAGGACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 90 bp CCTTTGAATCCAGTTGCATTTGCAACCTGGGTAGACATTTGGCTCTaGGTGTTGAATGCCCATAAACGCACCTATTCTTTTGAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: PLNPVAFATWVDIWL*VLNAHKRTYSFEGS
Trigger: TGAACCCTCAAAAGAATAGGTGCGTTTATGGGCATTCAACACCCAGAGCCAAATGTCTACCCAGGTTGCAAATGCAACTGGATTCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS-3UTR CAA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAAGAAAGGACTCAGGCTaGGCGTTGCCTCCACCAAAC +
Preference number: 5 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGRKDSG*ALPPPN
Trigger: GTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCT...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGTGCTGCTGCAGTCACTaGAATGGCAACGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALCCCSH*NGNAPP
Trigger: CGGAGGAGCGTTGCCATTCAAGTGACTGCAGCAGCA...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTGAAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAACAGTATGGTGCTCTCTaGTTGTTACTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: LKILTGVSNAKESGSHYQQYGAL*LLLFSL
Trigger: CAGTGAGAACAGTAACAACAAGAGAGCACCATACTG...TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp TACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTTTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: YSSDPYIQVETTSSGRHGLETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...ACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAACCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: FVTHKISVICIHLARLLQPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGCCTTCTCCCAGGGGCTaGCCCAGTGTCAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALPSPRG*PSVSLS
Trigger: AGATAAGCTGACACTGGGCAAGCCCCTGGGAGAAGG...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGATTCCGCCATGACCACTaGCCCAAAGCAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGFRHDH*PKATFS
Trigger: GGAGAAGGTTGCTTTGGGCAAGTGGTCATGGCGGAA...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: EWIKASFKRTLVPFILGSTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: IKASFKRTLVPFILGSPVTVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTTTCTTCTCCTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: QKQKASCQREAHSAIISTFFSSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAGGAGAAGAA...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS-3UTR CAA 90 bp TCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCCCTACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: SDPYIQVETTSSGRHGLPTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...AGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 5 (lower is better)
Translates to: PNRRLQRQRVWKPLSKFTDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...AGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAACATCTTGCACGGCTATaGCAAAGTGAGTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: AREKHILLSFQLRSVLKEHLARL*QSEWVF
Trigger: AAACACCCACTCACTTTGCAATAGCCGTGCAAGATG...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATCATCTTGCACGGCTATaGCAAAGTGAGTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: KILTGVSNAKESGSHYQNHLARL*QSEWVF
Trigger: AAACACCCACTCACTTTGCAATAGCCGTGCAAGATG...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAGAAGCAGAAGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTCACGTACACTTCTGGTaGAGAGATTTGGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: QKQKASCQREAHSAIISTHVHFW*RDLVFG
Trigger: ACCAAATACCAAATCTCTCAACCAGAAGTGTACGTG...AGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR CAA 90 bp ACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGTCCACACGTACACTTCTGGTaGAGAGATTTGGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: TKLTRKAERTSTLSPTGPHVHFW*RDLVFG
Trigger: ACCAAATACCAAATCTCTCAACCAGAAGTGTACGTG...TGGACCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CAA 90 bp GTAATCTCAGCTTCCAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGGCTGGCCTTCTACAGTaGCCCTGTTGGGGAAATGAT +
Preference number: 5 (lower is better)
Translates to: VISASKMSDISYHVHFTQAGLLQ*PCWGND
Trigger: ATCATTTCCCCAACAGGGCAACTGTAGAAGGCCAGC...CTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTGGAAGCTGAGATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp AGGCCAGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCAATCAGCGAGGTATATaGACCTTGTCCAGTTTACTC +
Preference number: 5 (lower is better)
Translates to: RPAAREKHILLSFQLRSVNQRGI*TLSSLL
Trigger: GAGTAAACTGGACAAGGTCAATATACCTCGCTGATT...GACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS-3UTR CAA 90 bp AGCTGCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAATGGCACATGCTCGTTTaGTTCTTTCCTCTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: SCQREAHSAIISTKVCPQWHMLV*FFPLRC
Trigger: ACAGCGAAGAGGAAAGAACAAAACGAGCATGTGCCA...TTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS TCA 90 bp AACAAGAAAGGCACTATCATAATCTTGGCTTCCAAGTGGGGAAACTaGGGCACAGAGCAGTTAAGTAACCTGCCAAAAGCCACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: NKKGTIIILASKWGN*GTEQLSNLPKATKL
Trigger: AAGCTTTGTGGCTTTTGGCAGGTTACTTAACTGCTCTGTGCCTCAGTTTCCCCACTTGGAAGCCAAGATTATGATAGTGCCTTTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 90 bp TCTGAGGAAATGTGGTTGGCGTCAATCTGTAATGGCAATTTTCAATaGTTCGAGAAGTTCTGGAAACACCGATTCTCTACTGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: SEEMWLASICNGNFQ*FEKFWKHRFSTGHD
Trigger: ATCGTGGCCAGTAGAGAATCGGTGTTTCCAGAACTTCTCGAACCATTGAAAATTGCCATTACAGATTGACGCCAACCACATTTCCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 90 bp TTCCTTCCTTTGAATCCAGTTGCATTTGCAACCTGGGTAGACATTTaGCTCTGGGTGTTGAATGCCCATAAACGCACCTATTCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: FLPLNPVAFATWVDI*LWVLNAHKRTYSFE
Trigger: CTCAAAAGAATAGGTGCGTTTATGGGCATTCAACACCCAGAGCCAAATGTCTACCCAGGTTGCAAATGCAACTGGATTCAAAGGAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGACTCAGGCTTGGCGTaGCCTCCACCAAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALDSGLA*PPPNFA
Trigger: AGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTC...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGCAGTATGGTGCTCTCTaGTTGTTACTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: VCYSTSVPFSPAQLTFSEQYGAL*LLLFSL
Trigger: CAGTGAGAACAGTAACAACAAGAGAGCACCATACTG...CTCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGCAGTATGGTGCTCTCTaGTTGTTACTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: YYKINKEGRTHVHLESYWQYGAL*LLLFSL
Trigger: CAGTGAGAACAGTAACAACAAGAGAGCACCATACTG...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGTTGAAGAGAGGCGTGTaGTTATCCTCACCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALLKRGV*LSSPAG
Trigger: CCCCGCTGGTGAGGATAACAACACGCCTCTCTTCAA...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GCCAGAGAGAAGCACATTCTGCTATCATTTCAACTAAGGTCTGTCCTCAAGGAATTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: AREKHILLSFQLRSVLKELETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...TTCCTTGAGGACAGACCTTAGTTGAAATGATAGCAGAATGTGCTTCTCTCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SVICIHLARLLQSEWVFPVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...TGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAATTCCGCCATGACCACTaGCCCAAAGCAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FVTHKISVICIHLARLLQFRHDH*PKATFS
Trigger: GGAGAAGGTTGCTTTGGGCAAGTGGTCATGGCGGAA...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCACCGCCTCCTTGGGCTaGTCTTTGTCAATTCCCACT +
Preference number: 5 (lower is better)
Translates to: KSSPIITKLTRKAERTSTTASLG*SLSIPT
Trigger: AGTGGGAATTGACAAAGACAAGCCCAAGGAGGCGGT...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTACGGTGACCGCCTCCTaGGGCTTGTCTTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFTVTAS*GLSLSI
Trigger: AATTGACAAAGACAAGCCCAAGGAGGCGGTCACCGT...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGCATGACACCAAGTCCTaGAAGGTCATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: THKISVICIHLARLLQSEHDTKS*KVICSS
Trigger: TGAGGAGCAGATGACCTTCAAGGACTTGGTGTCATG...CTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGGTCTCGATGAATACATTTTaGGGAAGCCAAGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: TPLIHIYKWRQQALGGMVSMNTF*GSQVLH
Trigger: ATGGAGTACTTGGCTTCCCAAAAATGTATTCATCGA...GACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTCTGGAGCCATCCACTaGACTGGAAGCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFSGAIH*TGSRPL
Trigger: CAATGGGCGGCTTCCAGTCAAGTGGATGGCTCCAGA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTTCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: EWIKASFKRTLVPFILGSSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: NYYKINKEGRTHVHLESYSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CTGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTACTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 5 (lower is better)
Translates to: LLQKPSSPPGEDYKFSTVLVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...TACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGATGAGGCTGGATCTTTaGGTGAGGTCCTGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: SSPIITKLTRKAERTSTLMRLDL*VRSCQN
Trigger: ATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCAT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGAGAGATTTGGTATTTGGTaGGTGGCTCTTCTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: VCYSTSVPFSPAQLTFSERFGIW*VALLAL
Trigger: TAGAGCCAGAAGAGCCACCAACCAAATACCAAATCT...CTCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp TATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACTGGAGATTTGGTATTTGGTaGGTGGCTCTTCTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: YYKINKEGRTHVHLESYWRFGIW*VALLAL
Trigger: TAGAGCCAGAAGAGCCACCAACCAAATACCAAATCT...CCAGTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CAA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGAGATTTGGTATTTGGTaGGTGGCTCTTCTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMRFGIW*VALLAL
Trigger: TAGAGCCAGAAGAGCCACCAACCAAATACCAAATCT...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
CDS-3UTR CAA 90 bp ACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAAGTGAAGGGCTTCTGGTTGAGAGATTaGGTATTTGGTTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: TDTELVPSNDFLVMEVKGFWLRD*VFGWWL
Trigger: GAGCCACCAACCAAATACCAAATCTCTCAACCAGAA...GCCCTTCACTTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTTTCTCCCTCACAGGCTaGGCACATGCTCGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: IKASFKRTLVPFILGSPVFSLTG*AHARFV
Trigger: AACAAAACGAGCATGTGCCAAGCCTGTGAGGGAGAA...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS GCA 90 bp AATTTTCTTTCTGTCCTAATTCCTCCAGAGAGTCACTTGAGGACATaGAGACAGTCCTCTCTGGCTTCATTAGTGCCTTTATGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: NFLSVLIPPESHLRT*RQSSLASLVPLWLY
Trigger: GTACAACCATAAAGGCACTAATGAAGCCAGAGAGGACTGTCTGCATGTCCTCAAGTGACTCTCTGGAGGAATTAGGACAGAAAGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 90 bp CTTTATCCCTGTGCTTATCTAAGTGTCAAAGTGATGGGATTTAGGTaGACCCATATGATGCTGAAACAGTGGGAAGAGGGGCAAAACTAT +
Preference number: 5 (lower is better)
Translates to: LYPCAYLSVKVMGFR*THMMLKQWEEGQNY
Trigger: ATAGTTTTGCCCCTCTTCCCACTGTTTCAGCATCATATGGGTGCACCTAAATCCCATCACTTTGACACTTAGATAAGCACAGGGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS-3UTR CAA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGCTGAAGTCTGGCTTCTaGGTCGTGTTCTTCATTCGG +
Preference number: 5 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRLKSGF*VVFFIR
Trigger: CCGAATGAAGAACACGACCAAGAAGCCAGACTTCAG...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCCTGAAGTCTGGCTTCTaGGTCGTGTTCTTCATTCGG +
Preference number: 5 (lower is better)
Translates to: KSSPIITKLTRKAERTSTLKSGF*VVFFIR
Trigger: CCGAATGAAGAACACGACCAAGAAGCCAGACTTCAG...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTGGGGGTGTCTGCCGTaGAAGAGAGGCGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFWGCLP*KRGVLL
Trigger: TAACAACACGCCTCTCTTCAACGGCAGACACCCCCA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTAGACGTTTTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: HLLRGRWYHLSWEVQLDVLETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...AACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATTTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYLETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGCTCCAGAAACCTTCTTCTCCTCCTGGGGAAGATTACAAGTTTTCAACTGTATGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: CSRNLLLLLGKITSFQLYVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...ATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTCATGACACCAAGTCCTaGAAGGTCATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFHDTKS*KVICSS
Trigger: TGAGGAGCAGATGACCTTCAAGGACTTGGTGTCATG...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGATCATGTACAGTTCGTaGGTGCAGTTGGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: SSPIITKLTRKAERTSTLIMYSS*VQLAGL
Trigger: TAAGCCAGCCAACTGCACCAACGAACTGTACATGAT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: KSSPIITKLTRKAERTSTSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCATTTCAACTAAGGTCTGTCCTCAAGGAATGGATTAAGGCATCTTTTAAGAGGTCTTCTACCAACTGCTaGAACGTTGGTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SFQLRSVLKEWIKASFKRSSTNC*NVGLWE
Trigger: CTCCCAGAGACCAACGTTCAAGCAGTTGGTAGAAGA...CCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTGCAGTCACTGGTGTTTaGTTCCTGGGTAGATTTCAC +
Preference number: 5 (lower is better)
Translates to: IKASFKRTLVPFILGSPVAVTGV*FLGRFH
Trigger: GTGAAATCTACCCAGGAACAAAACACCAGTGACTGC...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCATGAGGCTGGATCTTTaGGTGAGGTCCTGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: KSSPIITKLTRKAERTSTMRLDL*VRSCQN
Trigger: ATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCAT...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTTAGACGTTGCGTTGACGTAATGACAGGGTTGCACACCAAAATGAAACACCTTAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: VRRCVDVMTGLHTKMKHLNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...AAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAACGTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCCAGTTCATCTTGCACGGCTATaGCAAAGTGAGTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: IKASFKRTLVPFILGSPVHLARL*QSEWVF
Trigger: AAACACCCACTCACTTTGCAATAGCCGTGCAAGATG...AACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAAAGATTTGGTATTTGGTaGGTGGCTCTTCTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQRFGIW*VALLAL
Trigger: TAGAGCCAGAAGAGCCACCAACCAAATACCAAATCT...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR CAA 90 bp GGTCTGCTACAGCACATCTGTACCCTTTTCACCTGCCCAATTAACATTTTCAGATATACATGGTTCCCTTaGCACAGAGGAAATAGATGC +
Preference number: 5 (lower is better)
Translates to: GLLQHICTLFTCPINIFRYTWFP*HRGNRC
Trigger: GCATCTATTTCCTCTGTGCAAAGGGAACCATGTATA...TCTGAAAATGTTAATTGGGCAGGTGAAAAGGGTACAGATGTGCTGTAGCAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS TCA 90 bp CCAGAATACCACTGTAAATTCTTCATGTCTGCTAATAATGGCGAATaGCTACTACCGACTGAAAGCTTCTACTTTGCCAAGCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: PEYHCKFFMSANNGE*LLPTESFYFAKHCS
Trigger: TGAGCAGTGCTTGGCAAAGTAGAAGCTTTCAGTCGGTAGTAGTCATTCGCCATTATTAGCAGACATGAAGAATTTACAGTGGTATTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS-3UTR CAA 90 bp GAATGGATTAAGGCATCTTTTAAGAGGACGCTGGTACCATTTATCTTGGGAAGTCAGTATGGTGCTCTCTaGTTGTTACTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: EWIKASFKRTLVPFILGSQYGAL*LLLFSL
Trigger: CAGTGAGAACAGTAACAACAAGAGAGCACCATACTG...ACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGTTGGAAACTCCCATTTaGGGTCCTCTGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQLETPI*GPLEVH
Trigger: ATGAACTTCCAGAGGACCCAAAATGGGAGTTTCCAA...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SSPIITKLTRKAERTSTLVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAGTCCTACGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: NYYKINKEGRTHVHLESYVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...GTAGGACTCAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTCATGACACCAAGTCCTaGAAGGTCATCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFHDTKS*KVICSS
Trigger: TGAGGAGCAGATGACCTTCAAGGACTTGGTGTCATG...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGTCGATGAATACATTTTaGGGAAGCCAAGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: VICIHLARLLQSEWVFPKSMNTF*GSQVLH
Trigger: ATGGAGTACTTGGCTTCCCAAAAATGTATTCATCGA...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGGCATGTCGATGAATACATTTTaGGGAAGCCAAGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: FTPLIHIYKWRQQALGGMSMNTF*GSQVLH
Trigger: ATGGAGTACTTGGCTTCCCAAAAATGTATTCATCGA...CATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAGATCCTAACAGGCGTCTCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCGATGAATACATTTTaGGGAAGCCAAGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: KILTGVSNAKESGSHYQNSMNTF*GSQVLH
Trigger: ATGGAGTACTTGGCTTCCCAAAAATGTATTCATCGA...ATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 5 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCATCATGTACAGTTCGTaGGTGCAGTTGGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: KSSPIITKLTRKAERTSTIMYSS*VQLAGL
Trigger: TAAGCCAGCCAACTGCACCAACGAACTGTACATGAT...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp ATGCCAGGAACAGACACTGAATTGGTACCGTCTAATGACTTTCTTGTGATGGAACACGTACACTTCTGGTaGAGAGATTTGGTATTTGGT +
Preference number: 5 (lower is better)
Translates to: MPGTDTELVPSNDFLVMEHVHFW*RDLVFG
Trigger: ACCAAATACCAAATCTCTCAACCAGAAGTGTACGTG...TTCCATCACAAGAAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCCTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp GTAATCTGCATTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGTCCAAGTATTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: VICIHLARLLQSEWVFPKSKYSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAATACTTGGA...CTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAATGCAGATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGATGACGCTTGGGAAGGAACAGACACTGAATaGGTACCGTCTAATGACTTT +
Preference number: 5 (lower is better)
Translates to: QNVRHFIPRPLYTDDAWEGTDTE*VPSNDF
Trigger: AAAGTCATTAGACGGTACCAATTCAGTGTCTGTTCC...TTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp GTAATCTCAGCTTCCAAAATGTCAGACATTTCATACCACGTCCACTTTACACAGTATGGTGCTCTCTTGTaGTTACTGTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: VISASKMSDISYHVHFTQYGALL*LLFSLT
Trigger: TGTCAGTGAGAACAGTAACAACAAGAGAGCACCATA...CTGTGTAAAGTGGACGTGGTATGAAATGTCTGACATTTTGGAAGCTGAGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS-3UTR CAA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAATCGATGAATACATTTTaGGGAAGCCAAGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQSMNTF*GSQVLH
Trigger: ATGGAGTACTTGGCTTCCCAAAAATGTATTCATCGA...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTAGTTCGTTGGTGCAGTaGGCTGGCTTATCCATTCTG +
Preference number: 5 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFSSLVQ*AGLSIL
Trigger: CAGAATGGATAAGCCAGCCAACTGCACCAACGAACT...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 5 (lower is better)
Translates to: KSSPIITKLTRKAERTSTDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGAGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 5 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCCAACGCCAAAGAGTCTGGAAGCCATTATCAAAATTCACTGAAGAGAATACAGAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: SNAKESGSHYQNSLKRIQNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...CTGTATTCTCTTCAGTGAATTTTGATAATGGCTTCCAGACTCTTTGGCGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTTGAACAACGGCGATATTTaGTCTGATGTAGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: SSPIITKLTRKAERTSTLNNGDI*SDVGMR
Trigger: CCTCATACCTACATCAGACAAAATATCGCCGTTGTT...CAAGGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp AAAGATGGACGTATCCCCAAAACTATCAGCAGAACAACTCTGTGTTTCAATTTTCATCTTGCACGGCTATaGCAAAGTGAGTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: KDGRIPKTISRTTLCFNFHLARL*QSEWVF
Trigger: AAACACCCACTCACTTTGCAATAGCCGTGCAAGATG...AAAATTGAAACACAGAGTTGTTCTGCTGATAGTTTTGGGGATACGTCCATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTTTCTGGTTGAGAGATTaGGTATTTGGTTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFFWLRD*VFGWWL
Trigger: GAGCCACCAACCAAATACCAAATCTCTCAACCAGAA...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358487.10
ENST00000369061.8
CDS-3UTR CAA 90 bp TTCATCTTGCACGGCTATTGCAAAGTGAGTGGGTGTTTCCAAAGCAAAACACAATCCAAGTATTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: FILHGYCKVSGCFQSKTQSKYSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAATACTTGGA...TTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAAGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS TCA 90 bp TGTTTCTGTCTTAGCAAAGTAGTAACCAAAATCCCTGTATTCCTCTaGAACAGCCACCAACAGGGACTTGAACATTGTAGAAGGCTAATT +
Preference number: 5 (lower is better)
Translates to: CFCLSKVVTKIPVFL*NSHQQGLEHCRRLI
Trigger: AATTAGCCTTCTACAATGTTCAAGTCCCTGTTGGTGGCTGTTTCAGAGGAATACAGGGATTTTGGTTACTACTTTGCTAAGACAGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 90 bp AAATTAGAAAACCACTGGAATCTAACTCCTCTGCCCTCCAGTCCATaGAGTACCAGATTTCATCCAAATTTTATGTTCCTATGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: KLENHWNLTPLPSSP*STRFHPNFMFLCSG
Trigger: ACCTGAACATAGGAACATAAAATTTGGATGAAATCTGGTACTGCATGGACTGGAGGGCAGAGGAGTTAGATTCCAGTGGTTTTCTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTTATGGTGCTCTCTTGTaGTTACTGTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFYGALL*LLFSLT
Trigger: TGTCAGTGAGAACAGTAACAACAAGAGAGCACCATA...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp AAATCTTCTCCAATTATTACAAAATTAACAAGGAAGGCAGAACGCACGTCCACCTATGGTGCTCTCTTGTaGTTACTGTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: KSSPIITKLTRKAERTSTYGALL*LLFSLT
Trigger: TGTCAGTGAGAACAGTAACAACAAGAGAGCACCATA...GGTGGACGTGCGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369060.8
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAGTGTCAGCTTATCTCTaGGAAACTCCCATTTTGGGT +
Preference number: 5 (lower is better)
Translates to: FVTHKISVICIHLARLLQVSAYL*ETPILG
Trigger: ACCCAAAATGGGAGTTTCCAAGAGATAAGCTGACAC...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTATCATGTACAGTTCGTaGGTGCAGTTGGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFIMYSS*VQLAGL
Trigger: TAAGCCAGCCAACTGCACCAACGAACTGTACATGAT...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAACTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 5 (lower is better)
Translates to: FVTHKISVICIHLARLLQLVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp CAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGGGATCGATGAATACATTTTaGGGAAGCCAAGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: QLFTPLIHIYKWRQQALGSMNTF*GSQVLH
Trigger: ATGGAGTACTTGGCTTCCCAAAAATGTATTCATCGA...TCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTTGTAACACATAAGATCAGTGTAATCTGCATTCATCTTGCACGGCTATTGCAAACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: FVTHKISVICIHLARLLQTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...TTGCAATAGCCGTGCAAGATGAATGCAGATTACACTGATCTTATGTGTTACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTGACGTAATGACAGGGTaGCACACCAAAATGAAACAC +
Preference number: 5 (lower is better)
Translates to: VSKAKHNTLVQKEQRRYFDVMTG*HTKMKH
Trigger: GTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTC...AAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTCTGGTACCATTTATCTaGGGAAGTCCAGTTAGACGT +
Preference number: 5 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFLVPFI*GSPVRR
Trigger: ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAG...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp GTAATGACAGGGTTGCACACCAAAATGAAACACCTTCCTATGAATGAGTTCTTTTCCAAGTATTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: VMTGLHTKMKHLPMNEFFSKYSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAATACTTGGA...AAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS TCA 90 bp TGCATATTGAAGGAGCCACTGACATGGCTAAATTTGCACAGTGAGTaGCAGACGAGTGTTTATTTTGTTGGCAAGGATCATAAATTATTA +
Preference number: 5 (lower is better)
Translates to: CILKEPLTWLNLHSE*QTSVYFVGKDHKLL
Trigger: TAATAATTTATGATCCTTGCCAACAAAATAAACACTCGTCTGTCACTCACTGTGCAAATTTAGCCATGTCAGTGGCTCCTTCAATATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683885.1
CDS-3UTR CAA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTTATGGTGCTCTCTTGTaGTTACTGTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFYGALL*LLFSLT
Trigger: TGTCAGTGAGAACAGTAACAACAAGAGAGCACCATA...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGTCGATGAATACATTTTaGGGAAGCCAAGTACTCCAT +
Preference number: 5 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALSMNTF*GSQVLH
Trigger: ATGGAGTACTTGGCTTCCCAAAAATGTATTCATCGA...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TGTTTCCAAAGCAAAACACAATACTTTAGTACAGAAGGAACAACGGCGATATTTACCTATATACTGCATTaGTGCTCTGTAAGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: CFQSKTQYFSTEGTTAIFTYILH*CSVSVC
Trigger: GCACACACTTACAGAGCACAAATGCAGTATATAGGT...AAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357555.9
ENST00000358487.10
ENST00000369061.8
ENST00000478859.5
ENST00000613048.4
CDS-3UTR CAA 90 bp TTCCAATTATTTACTCCTCTGATCCATATATACAAGTGGAGACAACAAGCTCTGTCCAAGTATTCCTCATaGGTTGTGAGAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: FQLFTPLIHIYKWRQQALSKYSS*VVRVRI
Trigger: AATTCTCACTCTCACAACCAATGAGGAATACTTGGA...CAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGAGTAAATAATTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356226.8
ENST00000358487.10
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000478859.5
ENST00000604236.5
ENST00000613048.4
CDS TCA 90 bp CTATTTCTACATACATGTGGGAGGAAAGTACACAAACATTCTCATTaGTTTACTAAGCATTTGCAGAATGCAGGGGAATTTTCTACCTCT +
Preference number: 5 (lower is better)
Translates to: LFLHTCGRKVHKHSH*FTKHLQNAGEFSTS
Trigger: AGAGGTAGAAAATTCCCCTGCATTCTGCAAATGCTTAGTAAATCAATGAGAATGTTTGTGTACTTTCCTCCCACATGTATGTAGAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS TCA 72 bp TTCACGCGTACCCCAGGCTGCGGAGGAGCGCGGGCATaGCGCCCGCGGGCTGCCCTCGGATTTGGGGAACGA +
Preference number: 6 (lower is better)
Translates to: FTRTPGCGGARA*RPRAALGFGER
Trigger: TCGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCATGCCCGCGCTCCTCCGCAGCCTGGGGTACGCGTGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 90 bp GCTGCGGAGGAGCGCGGGCATGACGCCCGCGGGCTGCCCTCGGATTaGGGGAACGAGAGGAAGAAAGGACTCAGGCTTGGCGTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: AAEERGHDARGLPSD*GNERKKGLRLGVAS
Trigger: GGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCATGCCCGCGCTCCTCCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 90 bp AGCCCGGGGTTGCGGGGAGCAACTCCAAACGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAAGCCTCCCGGGCTTCACGCGTACCC +
Preference number: 6 (lower is better)
Translates to: SPGLRGATPNAEEWS*GLRRRQASRASRVP
Trigger: GGGTACGCGTGAAGCCCGGGAGGCTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGGAGTTGCTCCCCGCAACCCCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS TCA 72 bp AGGGACCGGCCCAGACCACGCGCACCTATGCAGGCCTaGCCTGTGGCAACAGCCCATGGGCAACCCGCACCT +
Preference number: 6 (lower is better)
Translates to: RDRPRPRAPMQA*PVATAHGQPAP
Trigger: AGGTGCGGGTTGCCCATGGGCTGTTGCCACAGGTCAGGCCTGCATAGGTGCGCGTGGTCTGGGCCGGTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 72 bp AGGCTGCGGAGGAGCGCGGGCATGACGCCCGCGGGCTaGCCTCGGATTTGGGGAACGAGAGGAAGAAAGGAC +
Preference number: 6 (lower is better)
Translates to: RLRRSAGMTPAG*PRIWGTRGRKD
Trigger: GTCCTTTCTTCCTCTCGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCATGCCCGCGCTCCTCCGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CCA 72 bp CCGGGGTTGCGGGGAGCAACTCCAAACGCAGAAGAGTaGTCCTTGGGTCTTCGCCGGCGCCAAGCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: PGLRGATPNAEE*SLGLRRRQASR
Trigger: CCGGGAGGCTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGGAGTTGCTCCCCGCAACCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS GCA 72 bp GTCCCCAGGCTCGGTGTTGGGAATACAGGCCCAGCATaGCGCTGGCGGCCACAATCCCGGCTTCCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: VPRLGVGNTGPA*RWRPQSRLPAF
Trigger: GAAGGCAGGAAGCCGGGATTGTGGCCGCCAGCGGCATGCTGGGCCTGTATTCCCAACACCGAGCCTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS GCA 72 bp AACAGCCCAGGGACCGGCCCAGACCACGCGCACCTATaGAGGCCTGACCTGTGGCAACAGCCCATGGGCAAC +
Preference number: 6 (lower is better)
Translates to: NSPGTGPDHAHL*RPDLWQQPMGN
Trigger: GTTGCCCATGGGCTGTTGCCACAGGTCAGGCCTGCATAGGTGCGCGTGGTCTGGGCCGGTCCCTGGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 72 bp AGCGCGGGCATGACGCCCGCGGGCTGCCCTCGGATTTaGGGAACGAGAGGAAGAAAGGACTCAGGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: SAGMTPAGCPRI*GTRGRKDSGLA
Trigger: CGCCAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCCAAATCCGAGGGCAGCCCGCGGGCGTCATGCCCGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 90 bp AAGGACTCAGGCTTGGCGTTGCCTCCACCAAACTTTGCTCGCGAGTaGCGAAGGCTCAGAGCGCGCAGGCAAGCTGCGGCCTCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: KDSGLALPPPNFARE*RRLRARRQAAASGP
Trigger: GGGCCCCGAGGCCGCAGCTTGCCTGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 90 bp TGCTGCTGCAGTCACTTGAATGGCAACGCTCCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGGGTCGGGATGGAGAAAGCGACGAGC +
Preference number: 6 (lower is better)
Translates to: CCCSHLNGNAPPRPV*SPRPAWVGMEKATS
Trigger: GCTCGTCGCTTTCTCCATCCCGACCCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGGAGCGTTGCCATTCAAGTGACTGCAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000490349.5
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CCA 72 bp TGCGGGGAGCAACTCCAAACGCAGAAGAGTGGTCCTTaGGTCTTCGCCGGCGCCAAGCCTCCCGGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: CGEQLQTQKSGP*VFAGAKPPGLH
Trigger: GTGAAGCCCGGGAGGCTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGGAGTTGCTCCCCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 72 bp GGCTTGGCGTTGCCTCCACCAAACTTTGCTCGCGAGTaGCGAAGGCTCAGAGCGCGCAGGCAAGCTGCGGCC +
Preference number: 6 (lower is better)
Translates to: GLALPPPNFARE*RRLRARRQAAA
Trigger: GGCCGCAGCTTGCCTGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 72 bp GCGTGGGTCGGGATGGAGAAAGCGACGAGCCCGGGGTaGCGGGGAGCAACTCCAAACGCAGAAGAGTGGTCC +
Preference number: 6 (lower is better)
Translates to: AWVGMEKATSPG*RGATPNAEEWS
Trigger: GGACCACTCTTCTGCGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGCTTTCTCCATCCCGACCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 90 bp ACAAGCCTGCCCCCAAAGACAGGCAGAGTGACAAGCAGGAAGGGCTaGGCTGCGGAGCGGTCCCCATGCCAGGCCTGTGCTGGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: TSLPPKTGRVTSRKG*AAERSPCQACAGLF
Trigger: GAAGAGCCCAGCACAGGCCTGGCATGGGGACCGCTCCGCAGCCAAGCCCTTCCTGCTTGTCACTCTGCCTGTCTTTGGGGGCAGGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS GCA 72 bp GCTTGGCGTTGCCTCCACCAAACTTTGCTCGCGAGTTaGGAAGGCTCAGAGCGCGCAGGCAAGCTGCGGCCT +
Preference number: 6 (lower is better)
Translates to: AWRCLHQTLLAS*EGSERAGKLRP
Trigger: AGGCCGCAGCTTGCCTGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS GCA 72 bp CGTGGGTCGGGATGGAGAAAGCGACGAGCCCGGGGTTaGGGGGAGCAACTCCAAACGCAGAAGAGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: RGSGWRKRRARG*GEQLQTQKSGP
Trigger: AGGACCACTCTTCTGCGTTTGGAGTTGCTCCCCGCAACCCCGGGCTCGTCGCTTTCTCCATCCCGACCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS GCA 72 bp CTGCACACTTCCTCTACGGGCATGGACTACGCGCAATaGCTTCAGCCTGCGGTGGGCTCAGGAACCGAGGCG +
Preference number: 6 (lower is better)
Translates to: LHTSSTGMDYAQ*LQPAVGSGTEA
Trigger: CGCCTCGGTTCCTGAGCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAGTGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000336553.10
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000491111.1
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
ENST00000684153.1
CDS GCA 72 bp GGGTCTTCCTGTCACTCCACGGGAGACCGCAGAAGGTaGAGCACAGTGGCCCAGGAAGACCACTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GSSCHSTGDRRR*STVAQEDHSCW
Trigger: CCAGCAGGAGTGGTCTTCCTGGGCCACTGTGCTGCACCTTCTGCGGTCTCCCGTGGAGTGACAGGAAGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 72 bp GGACTCCTACGGTGTGGCGCAGCCTGGACCACCAACTaGGACCCAGTCTCCCATTGGTCTCCTTGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: GLLRCGAAWTTN*DPVSHWSPWQQ
Trigger: CTGCTGCCAAGGAGACCAATGGGAGACTGGGTCCCAGTTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CCA 72 bp GCGGCCCCGCGGCTTTCTAGCTTGTTTCCTGACCCGTaGGTCTTCCTGTCACTCCACGGGAGACCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: AAPRLSSLFPDP*VFLSLHGRPQK
Trigger: CTTCTGCGGTCTCCCGTGGAGTGACAGGAAGACCCACGGGTCAGGAAACAAGCTAGAAAGCCGCGGGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 72 bp CGCACCTATGCAGGCCTGACCTGTGGCAACAGCCCATaGGCAACCCGCACCTTTGTCTTGGTGCCTCGGGAG +
Preference number: 6 (lower is better)
Translates to: RTYAGLTCGNSP*ATRTFVLVPRE
Trigger: CTCCCGAGGCACCAAGACAAAGGTGCGGGTTGCCCATGGGCTGTTGCCACAGGTCAGGCCTGCATAGGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 72 bp GGCCCAGACCACGCGCACCTATGCAGGCCTGACCTGTaGCAACAGCCCATGGGCAACCCGCACCTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: GPDHAHLCRPDL*QQPMGNPHLCL
Trigger: AAGACAAAGGTGCGGGTTGCCCATGGGCTGTTGCCACAGGTCAGGCCTGCATAGGTGCGCGTGGTCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 72 bp TTGCGGGGAGCAACTCCAAACGCAGAAGAGTGGTCCTaGGGTCTTCGCCGGCGCCAAGCCTCCCGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: LRGATPNAEEWS*GLRRRQASRAS
Trigger: TGAAGCCCGGGAGGCTTGGCGCCGGCGAAGACCCAAGGACCACTCTTCTGCGTTTGGAGTTGCTCCCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 72 bp AGTCACTTGAATGGCAACGCTCCTCCGCGACCTGTGTaGTCCCCGCGCCCCGCGTGGGTCGGGATGGAGAAA +
Preference number: 6 (lower is better)
Translates to: SHLNGNAPPRPV*SPRPAWVGMEK
Trigger: TTTCTCCATCCCGACCCACGCGGGGCGCGGGGACAACACAGGTCGCGGAGGAGCGTTGCCATTCAAGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000490349.5
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 72 bp CCTACACCCTGCAGGGCGGCCCCGCGGCTTTCTAGCTaGTTTCCTGACCCGTGGGTCTTCCTGTCACTCCAC +
Preference number: 6 (lower is better)
Translates to: PTPCRAAPRLSS*FPDPWVFLSLH
Trigger: GTGGAGTGACAGGAAGACCCACGGGTCAGGAAACAAGCTAGAAAGCCGCGGGGCCGCCCTGCAGGGTGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CAA 90 bp TGGTGCGACCTCCTAGGCAGGATAATTAGGTCCCCAGGCTCGGTGTaGGGAATACAGGCCCAGCATGCCGCTGGCGGCCACAATCCCGGC +
Preference number: 6 (lower is better)
Translates to: WCDLLGRIIRSPGSV*GIQAQHAAGGHNPG
Trigger: GCCGGGATTGTGGCCGCCAGCGGCATGCTGGGCCTGTATTCCCAACACCGAGCCTGGGGACCTAATTATCCTGCCTAGGAGGTCGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS CAA 90 bp AACCCCCGCCCTCCAAGAAGGCAGACCAATACAGTGCCCTCCGCTTaGGGCTTCCACCTAAGGGGTGATCTGTCCACTGCTGGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: NPRPPRRQTNTVPSA*GFHLRGDLSTAGSA
Trigger: GGCCGAGCCAGCAGTGGACAGATCACCCCTTAGGTGGAAGCCCAAAGCGGAGGGCACTGTATTGGTCTGCCTTCTTGGAGGGCGGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS TCA 72 bp GGCTCCAGGCAGAGAAAGGTGGACAGGGCGCTCCGCTaGATCTCAAGCCGTTCCATCATCCCGCTAGCTGGC +
Preference number: 6 (lower is better)
Translates to: GSRQRKVDRALR*ISSRSIIPLAG
Trigger: GCCAGCTAGCGGGATGATGGAACGGCTTGAGATTCAGCGGAGCGCCCTGTCCACCTTTCTCTGCCTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp AGGCTCGGTGTTGGGAATACAGGCCCAGCATGCCGCTaGCGGCCACAATCCCGGCTTCCTGCCTTCAATACC +
Preference number: 6 (lower is better)
Translates to: RLGVGNTGPACR*RPQSRLPAFNT
Trigger: GGTATTGAAGGCAGGAAGCCGGGATTGTGGCCGCCAGCGGCATGCTGGGCCTGTATTCCCAACACCGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS CAA 90 bp CGAGAGGAAGAAAGGACTCAGGCTTGGCGTTGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGCTCAGAGCGCGCAGGCAAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: REEERTQAWRCLHQT*LASCEGSERAGKLR
Trigger: CCGCAGCTTGCCTGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 90 bp TTCCTTAATCCTACACCCTGCAGGGCGGCCCCGCGGCTTTCTAGCTaGTTTCCTGACCCGTGGGTCTTCCTGTCACTCCACGGGAGACCG +
Preference number: 6 (lower is better)
Translates to: FLNPTPCRAAPRLSS*FPDPWVFLSLHGRP
Trigger: CGGTCTCCCGTGGAGTGACAGGAAGACCCACGGGTCAGGAAACAAGCTAGAAAGCCGCGGGGCCGCCCTGCAGGGTGTAGGATTAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 72 bp TCCTCACCAGCGGGGTGTTGGAGTTCATGGAGGAGCTaGACTCAGCCGAAACCTGTCTCCGCAGGGGGATAC +
Preference number: 6 (lower is better)
Translates to: SSPAGCWSSWRS*TQPKPVSAGGY
Trigger: GTATCCCCCTGCGGAGACAGGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000346997.6
ENST00000351936.11
ENST00000356226.8
ENST00000638709.2
ENST00000682296.1
ENST00000682550.1
ENST00000682772.1
ENST00000683211.1
ENST00000683418.1
ENST00000684153.1
CDS CCA 72 bp AGAGGCCAGCCCTTCTTGTTATGGACTCCTACGGTGTaGCGCAGCCTGGACCACCAACTGGGACCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: RGQPFLLWTPTV*RSLDHQLGPSL
Trigger: GAGACTGGGTCCCAGTTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGAAGGGCTGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CAA 72 bp GAAAGGACTCAGGCTTGGCGTTGCCTCCACCAAACTTaGCTCGCGAGTTGCGAAGGCTCAGAGCGCGCAGGC +
Preference number: 6 (lower is better)
Translates to: ERTQAWRCLHQT*LASCEGSERAG
Trigger: GCCTGCGCGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 72 bp AGCCCTCCCGGTTTAATGCTTGCGTCCAATCAGAACTaGCGAGCAGCTTGGGGGTGCTCCCCACCACCACCC +
Preference number: 6 (lower is better)
Translates to: SPPGLMLASNQN*RAAWGCSPPPP
Trigger: GGGTGGTGGTGGGGAGCACCCCCAAGCTGCTCGCAAGTTCTGATTGGACGCAAGCATTAAACCGGGAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CAA 90 bp GACTCAGCCGAAACCTGTCTCCGCAGGGGGATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTGCTGAAGTCTGGCTTCTTGGTCGTG +
Preference number: 6 (lower is better)
Translates to: DSAETCLRRGIRLVS*CTAGWLLKSGFLVV
Trigger: CACGACCAAGAAGCCAGACTTCAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTATCCCCCTGCGGAGACAGGTTTCGGCTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000346997.6
ENST00000351936.11
ENST00000356226.8
ENST00000638709.2
ENST00000682296.1
ENST00000682550.1
ENST00000682772.1
ENST00000683211.1
ENST00000683418.1
ENST00000684153.1
CDS TCA 72 bp TTGTTCTTTTCTGCCCTCACTGGGCCAAGCCATGGGTaGGTCTGTAACAGCCCAGGGACCGGCCCAGACCAC +
Preference number: 6 (lower is better)
Translates to: LFFSALTGPSHG*VCNSPGTGPDH
Trigger: GTGGTCTGGGCCGGTCCCTGGGCTGTTACAGACTCACCCATGGCTTGGCCCAGTGAGGGCAGAAAAGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 72 bp GACAAGAAGACAGGTGACAGGCAGAACTTCCCTCCATaGTCCTCTCTCGGGGACCATCGGAGCCGGGCAGTT +
Preference number: 6 (lower is better)
Translates to: DKKTGDRQNFPP*SSLGDHRSRAV
Trigger: AACTGCCCGGCTCCGATGGTCCCCGAGAGAGGAGCATGGAGGGAAGTTCTGCCTGTCACCTGTCTTCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491475.1
ENST00000611527.1
ENST00000613324.4
ENST00000636922.1
ENST00000683035.1
CDS GCA 72 bp CCCAGCATGCCGCTGGCGGCCACAATCCCGGCTTCCTaGCTTCAATACCATAATCCTTCCTGGAGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: PSMPLAATIPAS*LQYHNPSWSLS
Trigger: GCTCAGACTCCAGGAAGGATTATGGTATTGAAGGCAGGAAGCCGGGATTGTGGCCGCCAGCGGCATGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp CCTTGCAGACAAACTCTACGTCTCCTCCGACCACTGTaGAGGCATTTGCCGGCAGTCCGGCTTGGAGGATGG +
Preference number: 6 (lower is better)
Translates to: PCRQTLRLLRPL*RHLPAVRLGGW
Trigger: CCATCCTCCAAGCCGGACTGCCGGCAAATGCCTCCACAGTGGTCGGAGGAGACGTAGAGTTTGTCTGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000336553.10
ENST00000346997.6
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000360144.7
ENST00000369056.5
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000478859.5
ENST00000490349.5
ENST00000604236.5
ENST00000613048.4
ENST00000638709.2
ENST00000682296.1
ENST00000682400.1
ENST00000682550.1
ENST00000682772.1
ENST00000683211.1
ENST00000683418.1
ENST00000683678.1
ENST00000684153.1
CDS CCA 72 bp GGAGCTGAGGTAAACACAGCTGAGAGCGTTCATGCCTaGGAGTCACGTCAGAGCCTCAGCAGCCGCCACTTG +
Preference number: 6 (lower is better)
Translates to: GAEVNTAESVHA*ESRQSLSSRHL
Trigger: CAAGTGGCGGCTGCTGAGGCTCTGACGTGACTCCCAGGCATGAACGCTCTCAGCTGTGTTTACCTCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478859.5
ENST00000682772.1
CDS CCA 72 bp GCATCAACGGGCAACAGAGGCCAGCCCTTCTTGTTATaGACTCCTACGGTGTGGCGCAGCCTGGACCACCAA +
Preference number: 6 (lower is better)
Translates to: ASTGNRGQPFLL*TPTVWRSLDHQ
Trigger: TTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGAAGGGCTGGCCTCTGTTGCCCGTTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CCA 72 bp ATGGTTCGAGAAGTTCTGGAAACACCGATTCTCTACTaGCCACGATGGGGCCAGGCGGGGGCCAGGCACAAC +
Preference number: 6 (lower is better)
Translates to: MVREVLETPILY*PRWGQAGARHN
Trigger: GTTGTGCCTGGCCCCCGCCTGGCCCCATCGTGGCCAGTAGAGAATCGGTGTTTCCAGAACTTCTCGAACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CAA 72 bp GAAACCTGTCTCCGCAGGGGGATACGTTTGGTCAGCTaGTGCACAGCCGGCTGGCTGCTGAAGTCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: ETCLRRGIRLVS*CTAGWLLKSGF
Trigger: GAAGCCAGACTTCAGCAGCCAGCCGGCTGTGCACAAGCTGACCAAACGTATCCCCCTGCGGAGACAGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000346997.6
ENST00000351936.11
ENST00000356226.8
ENST00000638709.2
ENST00000682296.1
ENST00000682550.1
ENST00000682772.1
ENST00000683211.1
ENST00000683418.1
ENST00000684153.1
CDS CAA 72 bp GCTCATGCATCAACGGGCAACAGAGGCCAGCCCTTCTaGTTATGGACTCCTACGGTGTGGCGCAGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: AHASTGNRGQPF*LWTPTVWRSLD
Trigger: GTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGAAGGGCTGGCCTCTGTTGCCCGTTGATGCATGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CAA 90 bp GGCTGCCCTCGGATTTGGGGAACGAGAGGAAGAAAGGACTCAGGCTaGGCGTTGCCTCCACCAAACTTTGCTCGCGAGTTGCGAAGGCTC +
Preference number: 6 (lower is better)
Translates to: GCPRIWGTRGRKDSG*ALPPPNFARELRRL
Trigger: GAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCCAAATCCGAGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 90 bp GCTGAGATGGCTCATGCATCAACGGGCAACAGAGGCCAGCCCTTCTaGTTATGGACTCCTACGGTGTGGCGCAGCCTGGACCACCAACTG +
Preference number: 6 (lower is better)
Translates to: AEMAHASTGNRGQPF*LWTPTVWRSLDHQL
Trigger: CAGTTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGAAGGGCTGGCCTCTGTTGCCCGTTGATGCATGAGCCATCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CAA 90 bp CCTCGGATTTGGGGAACGAGAGGAAGAAAGGACTCAGGCTTGGCGTaGCCTCCACCAAACTTTGCTCGCGAGTTGCGAAGGCTCAGAGCG +
Preference number: 6 (lower is better)
Translates to: PRIWGTRGRKDSGLA*PPPNFARELRRLRA
Trigger: CGCTCTGAGCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCCAAATCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS CAA 90 bp ACGGTGTGGCGCAGCCTGGACCACCAACTGGGACCCAGTCTCCCATaGGTCTCCTTGGCAGCAGTCAGGGTTAGCCTCTTTCCAATAAGT +
Preference number: 6 (lower is better)
Translates to: TVWRSLDHQLGPSLP*VSLAAVRVSLFPIS
Trigger: ACTTATTGGAAAGAGGCTAACCCTGACTGCTGCCAAGGAGACCAATGGGAGACTGGGTCCCAGTTGGTGGTCCAGGCTGCGCCACACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS TCA 72 bp CTGGGACAAGGAATAACTGGGGACGGCCTGCTCTGCTaGGATGGCTCATGCATCAACGGGCAACAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LGQGITGDGLLC*DGSCINGQQRP
Trigger: TGGCCTCTGTTGCCCGTTGATGCATGAGCCATCTCAGCAGAGCAGGCCGTCCCCAGTTATTCCTTGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS GCA 72 bp GGGGAACGAGAGGAAGAAAGGACTCAGGCTTGGCGTTaGCTCCACCAAACTTTGCTCGCGAGTTGCGAAGGC +
Preference number: 6 (lower is better)
Translates to: GEREEERTQAWR*LHQTLLASCEG
Trigger: GCCTTCGCAACTCGCGAGCAAAGTTTGGTGGAGGCAACGCCAAGCCTGAGTCCTTTCTTCCTCTCGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000336553.10
ENST00000356226.8
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369059.5
ENST00000369060.8
ENST00000457416.6
ENST00000604236.5
ENST00000613048.4
ENST00000684153.1
CDS GCA 72 bp GGACTCAGCCGAAACTTTTCTCCCATAGCGAGTCTCTaGCTCCCGCAGGCCTTTCCCTGGGACTCTGTGAGT +
Preference number: 6 (lower is better)
Translates to: GLSRNFSPIASL*LPQAFPWDSVS
Trigger: ACTCACAGAGTCCCAGGGAAAGGCCTGCGGGAGGCAGAGACTCGCTATGGGAGAAAAGTTTCGGCTGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682904.1
CDS GCA 72 bp CAGACACAGCCATACAGCAGGGTACGGGTGCAGTGCTaGTCATCTAGGTCTCAGAGATCCAAGGTTGGGGGC +
Preference number: 6 (lower is better)
Translates to: QTQPYSRVRVQC*SSRSQRSKVGG
Trigger: GCCCCCAACCTTGGATCTCTGAGACCTAGATGAGCAGCACTGCACCCGTACCCTGCTGTATGGCTGTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 72 bp GACGTTAATCCCATCTGCACACTTCCTCTACGGGCATaGACTACGCGCAATGCCTTCAGCCTGCGGTGGGCT +
Preference number: 6 (lower is better)
Translates to: DVNPICTLPLRA*TTRNAFSLRWA
Trigger: AGCCCACCGCAGGCTGAAGGCATTGCGCGTAGTCCATGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000336553.10
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000491111.1
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
ENST00000684153.1
CDS CCA 72 bp CCTTCTTGTTATGGACTCCTACGGTGTGGCGCAGCCTaGACCACCAACTGGGACCCAGTCTCCCATTGGTCT +
Preference number: 6 (lower is better)
Translates to: PSCYGLLRCGAA*TTNWDPVSHWS
Trigger: AGACCAATGGGAGACTGGGTCCCAGTTGGTGGTCCAGGCTGCGCCACACCGTAGGAGTCCATAACAAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CCA 72 bp GGTGAGGCGATCGCTCTGCTCCCAAAGGCTTCTTGCTaGGGTCAGTTCTGCGGGAGAGTCTGTATTTGCCAG +
Preference number: 6 (lower is better)
Translates to: GEAIALLPKASC*GQFCGRVCICQ
Trigger: CTGGCAAATACAGACTCTCCCGCAGAACTGACCCCAGCAAGAAGCCTTTGGGAGCAGAGCGATCGCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638709.2
CDS CCA 72 bp TCCTCACCAGCGGGGTGTTGGAGTTCATGGAGGAGCTaGACTCAGCCGAAACCCACAACATCCAGGTGGTAC +
Preference number: 6 (lower is better)
Translates to: SSPAGCWSSWRS*TQPKPTTSRWY
Trigger: GTACCACCTGGATGTTGTGGGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683250.1
CDS CAA 90 bp CGCAGCCTGGACCACCAACTGGGACCCAGTCTCCCATTGGTCTCCTaGGCAGCAGTCAGGGTTAGCCTCTTTCCAATAAGTCACATGCCA +
Preference number: 6 (lower is better)
Translates to: RSLDHQLGPSLPLVS*AAVRVSLFPISHMP
Trigger: TGGCATGTGACTTATTGGAAAGAGGCTAACCCTGACTGCTGCCAAGGAGACCAATGGGAGACTGGGTCCCAGTTGGTGGTCCAGGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CAA 90 bp AACCGAGGCGCTGCCGCTGCTGCTGCAGTCACTAAAGGAAAGAGATaGGCGAGTCAGGGAATCTTCCCCAATGCCAAATCACTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: NRGAAAAAAVTKGKR*ASQGIFPNAKSLQP
Trigger: GGGCTGGAGTGATTTGGCATTGGGGAAGATTCCCTGACTCGCCAATCTCTTTCCTTTAGTGACTGCAGCAGCAGCGGCAGCGCCTCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS GCA 72 bp CCTGGGAGTCACGTCAGAGCCTCAGCAGCCGCCACTTaGCATAGGGGTGCAACATCTTTCAGGAATGCAAGA +
Preference number: 6 (lower is better)
Translates to: PGSHVRASAAAT*HRGATSFRNAR
Trigger: TCTTGCATTCCTGAAAGATGTTGCACCCCTATGGCAAGTGGCGGCTGCTGAGGCTCTGACGTGACTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478859.5
ENST00000682772.1
CDS GCA 72 bp AACTGTTGGAGGAGTCTGCTCACAGCTCCGTATTTCTaGTGGGCTGGAGGTGAGCAGTCTCCCACCCTCACT +
Preference number: 6 (lower is better)
Translates to: NCWRSLLTAPYF*WAGGEQSPTLT
Trigger: AGTGAGGGTGGGAGACTGCTCACCTCCAGCCCAGCAGAAATACGGAGCTGTGAGCAGACTCCTCCAACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS GCA 72 bp AGGGAAAGGCTGTGTTGGTTCCTTAATCCTACACCCTaGAGGGCGGCCCCGCGGCTTTCTAGCTTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: RERLCWFLNPTP*RAAPRLSSLFP
Trigger: AGGAAACAAGCTAGAAAGCCGCGGGGCCGCCCTGCAGGGTGTAGGATTAAGGAACCAACACAGCCTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CAA 90 bp CCTGACCCACACACACTAGGCAGGAGGTCCCTCCCTAGGTTGTGCTaGGGTTTTGACACTGATGTAAAACTCAGGCGTCAGTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: PDPHTLGRRSLPRLC*GFDTDVKLRRQSPR
Trigger: CCTGGGAGACTGACGCCTGAGTTTTACATCAGTGTCAAAACCCAAGCACAACCTAGGGAGGGACCTCCTGCCTAGTGTGTGTGGGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478859.5
ENST00000682772.1
CDS TCA 72 bp AGCGACTCCCCTGGCGCAGCCACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTTGGTGGCTCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: SDSPGAATYTSG*EIWYLVGGSSG
Trigger: GCCAGAAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCAGGGGAGTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000346997.6
ENST00000351936.11
ENST00000358487.10
ENST00000359354.6
ENST00000369056.5
ENST00000369058.7
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000613324.4
ENST00000636922.1
ENST00000683035.1
ENST00000683211.1
ENST00000683678.1
CDS TCA 72 bp CTCCTTCTGGCTCTAATGTGGTATCCTCAACTAAACTaGAGGAGGGCCGGGCCAGGGACAAGGTTGCCATGG +
Preference number: 6 (lower is better)
Translates to: LLLALMWYPQLN*RRAGPGTRLPW
Trigger: CCATGGCAACCTTGTCCCTGGCCCGGCCCTCCTTCAGTTTAGTTGAGGATACCACATTAGAGCCAGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356226.8
ENST00000369059.5
ENST00000604236.5
ENST00000682400.1
ENST00000682550.1
ENST00000683250.1
ENST00000684153.1
CDS CCA 72 bp GACAAACCAGCAGAGGCATCTGGGACAAGGAATAACTaGGGACGGCCTGCTCTGCTGAGATGGCTCATGCAT +
Preference number: 6 (lower is better)
Translates to: DKPAEASGTRNN*GRPALLRWLMH
Trigger: ATGCATGAGCCATCTCAGCAGAGCAGGCCGTCCCCAGTTATTCCTTGTCCCAGATGCCTCTGCTGGTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS TCA 72 bp AGCGACTCCCCTGGCGCAGCCACGTACACTTCTGGTTaGGAGATTTGGTATTTGGTTGGTGGCTCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: SDSPGAATYTSG*EIWYLVGGSAE
Trigger: TTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCAGGGGAGTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS GCA 72 bp GCAAAACACAGACACAGCCATACAGCAGGGTACGGGTaGAGTGCTGCTCATCTAGGTCTCAGAGATCCAAGG +
Preference number: 6 (lower is better)
Translates to: AKHRHSHTAGYG*SAAHLGLRDPR
Trigger: CCTTGGATCTCTGAGACCTAGATGAGCAGCACTGCACCCGTACCCTGCTGTATGGCTGTGTCTGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 72 bp CGGTACCAATCCCCGGTCCTCTTCCATATCTCCATGTaGACGTTAATCCCATCTGCACACTTCCTCTACGGG +
Preference number: 6 (lower is better)
Translates to: RYQSPVLFHISM*TLIPSAHFLYG
Trigger: CCCGTAGAGGAAGTGTGCAGATGGGATTAACGTCCACATGGAGATATGGAAGAGGACCGGGGATTGGTACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000336553.10
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000491111.1
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
ENST00000684153.1
CDS CCA 72 bp CCTAAGGCGACAGGTCTGCACAGTTCCTCACACCAGTaGACAAAAGTATGGTGCGACCTCCTAGGCAGGATA +
Preference number: 6 (lower is better)
Translates to: PKATGLHSSSHQ*TKVWCDLLGRI
Trigger: TATCCTGCCTAGGAGGTCGCACCATACTTTTGTCCACTGGTGTGAGGAACTGTGCAGACCTGTCGCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp TCTGCAGAAAGGTGGGAGAGAGAAGACGGAGACAGATaGGAAGGAGGGAGAGGAGAGAACGTCCAACAAAGG +
Preference number: 6 (lower is better)
Translates to: SAERWEREDGDR*EGGRGENVQQR
Trigger: CCTTTGTTGGACGTTCTCTCCTCTCCCTCCTTCCCATCTGTCTCCGTCTTCTCTCTCCCACCTTTCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CCA 72 bp ATCCCGGCTTCCTGCCTTCAATACCATAATCCTTCCTaGAGTCTGAGCCCCAGTGAAAGCCCCAGCGTGTTT +
Preference number: 6 (lower is better)
Translates to: IPASCLQYHNPS*SLSPSESPSVF
Trigger: AAACACGCTGGGGCTTTCACTGGGGCTCAGACTCCAGGAAGGATTATGGTATTGAAGGCAGGAAGCCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp ACATCAGGAGAGGTATTACTGGTGTGGCAAGTCCACTaGGGCACCGGCAGGAAAGACAACAGCCCTTACAGT +
Preference number: 6 (lower is better)
Translates to: TSGEVLLVWQVH*GTGRKDNSPYS
Trigger: ACTGTAAGGGCTGTTGTCTTTCCTGCCGGTGCCCCAGTGGACTTGCCACACCAGTAATACCTCTCCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 72 bp AGTGGCGCAATCTCAGTCACTGCAAACTTCACCTCCTaGGTTCAAGCGATTCCCCTACCTCGCCTCCTAAGT +
Preference number: 6 (lower is better)
Translates to: SGAISVTANFTS*VQAIPLPRLLS
Trigger: ACTTAGGAGGCGAGGTAGGGGAATCGCTTGAACCCAGGAGGTGAAGTTTGCAGTGACTGAGATTGCGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683885.1
CDS CCA 72 bp GTGGCAACAGCCCATGGGCAACCCGCACCTTTGTCTTaGTGCCTCGGGAGTGATTTAAGGACTAAGGTGAAA +
Preference number: 6 (lower is better)
Translates to: VATAHGQPAPLS*CLGSDLRTKVK
Trigger: TTTCACCTTAGTCCTTAAATCACTCCCGAGGCACCAAGACAAAGGTGCGGGTTGCCCATGGGCTGTTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 72 bp CCCTGGCGCAGCCACGTACACTTCTGGTTGAGAGATTaGGTATTTGGTTGGTGGCTCTGCAGAAAGGTGGGA +
Preference number: 6 (lower is better)
Translates to: PWRSHVHFWLRD*VFGWWLCRKVG
Trigger: TCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CAA 72 bp GACCACCAACTGGGACCCAGTCTCCCATTGGTCTCCTaGGCAGCAGTCAGGGTTAGCCTCTTTCCAATAAGT +
Preference number: 6 (lower is better)
Translates to: DHQLGPSLPLVS*AAVRVSLFPIS
Trigger: ACTTATTGGAAAGAGGCTAACCCTGACTGCTGCCAAGGAGACCAATGGGAGACTGGGTCCCAGTTGGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491111.1
CDS CAA 90 bp GTGATCTGTCCACTGCTGGCTCGGCCACTGGGATCACCTGGTGTTTaGTTCCTGGGTAGATTTCACATCAGGAAAGTCAACAGTGTCCGG +
Preference number: 6 (lower is better)
Translates to: VICPLLARPLGSPGV*FLGRFHIRKVNSVR
Trigger: CCGGACACTGTTGACTTTCCTGATGTGAAATCTACCCAGGAACAAAACACCAGGTGATCCCAGTGGCCGAGCCAGCAGTGGACAGATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS TCA 72 bp CCACGTCCACTTTACACAGATGACGCTTGGGAACCATaGGGATCATGCAAAGCTCATAAACCCTGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PRPLYTDDAWEP*GSCKAHKPWLP
Trigger: GGGCAGCCAGGGTTTATGAGCTTTGCATGATCCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS TCA 72 bp CGCACCTATTCTTTTGAGGGTTCACCAGGGAGTACTTaGTTCCCATTCATCCCAAGACTCTCAGGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: RTYSFEGSPGST*FPFIPRLSGPG
Trigger: GCCAGGCCCTGAGAGTCTTGGGATGAATGGGAATCAAGTACTCCCTGGTGAACCCTCAAAAGAATAGGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS TCA 72 bp TCTCCACGAGGTTGGAATCCGTACCTTCCACCAATCTaGTGTTTAAGGCTGAAGTCCGGGAAAGCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: SPRGWNPYLPPI*CLRLKSGKASL
Trigger: CAGGCTGGCTTTCCCGGACTTCAGCCTTAAACATCAGATTGGTGGAAGGTACGGATTCCAACCTCGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 72 bp CATCAGGAAAGTCAACAGTGTCCGGCTCCTCCAAAGTaGAGACCCATCTCTTCGCTTAAGGCCTCCCTACTT +
Preference number: 6 (lower is better)
Translates to: HQESQQCPAPPK*RPISSLKASLL
Trigger: AAGTAGGGAGGCCTTAAGCGAAGAGATGGGTCTGCACTTTGGAGGAGCCGGACACTGTTGACTTTCCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357555.9
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
CDS GCA 72 bp GTGAGAGGGGTTACATGGTGGCTTGTGGCAGTCCACTaGTCCAGAAACCTTCTTCTCCTCCTCATTGGTTGT +
Preference number: 6 (lower is better)
Translates to: VRGVTWWLVAVH*SRNLLLLLIGC
Trigger: ACAACCAATGAGGAGGAGAAGAAGGTTTCTGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357555.9
CDS GCA 72 bp CCACACACACTAGGCAGGAGGTCCCTCCCTAGGTTGTaGTTGGGTTTTGACACTGATGTAAAACTCAGGCGT +
Preference number: 6 (lower is better)
Translates to: PHTLGRRSLPRL*LGFDTDVKLRR
Trigger: ACGCCTGAGTTTTACATCAGTGTCAAAACCCAAGCACAACCTAGGGAGGGACCTCCTGCCTAGTGTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478859.5
ENST00000682772.1
CDS GCA 72 bp TGTGGAGCTGAGATCCTCACACCCAAGTGTCTGGGTTaGACAAGCAAATGGCAGAAGCAAGCGGGAAAAGAC +
Preference number: 6 (lower is better)
Translates to: CGAEILTPKCLG*TSKWQKQAGKD
Trigger: GTCTTTTCCCGCTTGCTTCTGCCATTTGCTTGTGCAACCCAGACACTTGGGTGTGAGGATCTCAGCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 72 bp GGTCTGCACAGTTCCTCACACCAGTGGACAAAAGTATaGTGCGACCTCCTAGGCAGGATAATTAGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: GLHSSSHQWTKV*CDLLGRIIRSP
Trigger: TGGGGACCTAATTATCCTGCCTAGGAGGTCGCACCATACTTTTGTCCACTGGTGTGAGGAACTGTGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp GCCTTCAAAAACGAGATACATCAGGAGAGGTATTACTaGTGTGGCAAGTCCACTGGGGCACCGGCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: AFKNEIHQERYY*CGKSTGAPAGK
Trigger: CTTTCCTGCCGGTGCCCCAGTGGACTTGCCACACCAGTAATACCTCTCCTGATGTATCTCGTTTTTGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 72 bp GTGTTGTTATCCTCACCAGCGGGGTGTTGGAGTTCATaGAGGAGCTGGACTCAGCCGAAACTTTTCTCCCAT +
Preference number: 6 (lower is better)
Translates to: VLLSSPAGCWSS*RSWTQPKLFSH
Trigger: ATGGGAGAAAAGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682904.1
CDS CCA 72 bp TCCTCACCAGCGGGGTGTTGGAGTTCATGGAGGAGCTaGACTCAGCCGAAACCTGGATACAAAATGCAAAGA +
Preference number: 6 (lower is better)
Translates to: SSPAGCWSSWRS*TQPKPGYKMQR
Trigger: TCTTTGCATTTTGTATCCAGGTTTCGGCTGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CAA 72 bp AGCCGTTCCATCATCCCGCTAGCTGGCACTAGAAATTaGCATTTCAGCCATTTCCAGGTCCAAACCCCACGG +
Preference number: 6 (lower is better)
Translates to: SRSIIPLAGTRN*HFSHFQVQTPR
Trigger: CCGTGGGGTTTGGACCTGGAAATGGCTGAAATGCAAATTTCTAGTGCCAGCTAGCGGGATGATGGAACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS CAA 72 bp GACCCACACACACTAGGCAGGAGGTCCCTCCCTAGGTaGTGCTTGGGTTTTGACACTGATGTAAAACTCAGG +
Preference number: 6 (lower is better)
Translates to: DPHTLGRRSLPR*CLGFDTDVKLR
Trigger: CCTGAGTTTTACATCAGTGTCAAAACCCAAGCACAACCTAGGGAGGGACCTCCTGCCTAGTGTGTGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478859.5
ENST00000682772.1
CDS CAA 72 bp CCACTGCTGGCTCGGCCACTGGGATCACCTGGTGTTTaGTTCCTGGGTAGATTTCACATCAGGAAAGTCAAC +
Preference number: 6 (lower is better)
Translates to: PLLARPLGSPGV*FLGRFHIRKVN
Trigger: GTTGACTTTCCTGATGTGAAATCTACCCAGGAACAAAACACCAGGTGATCCCAGTGGCCGAGCCAGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CAA 90 bp CTATCTCCTGACCCACACACACTAGGCAGGAGGTCCCTCCCTAGGTaGTGCTTGGGTTTTGACACTGATGTAAAACTCAGGCGTCAGTCT +
Preference number: 6 (lower is better)
Translates to: LSPDPHTLGRRSLPR*CLGFDTDVKLRRQS
Trigger: AGACTGACGCCTGAGTTTTACATCAGTGTCAAAACCCAAGCACAACCTAGGGAGGGACCTCCTGCCTAGTGTGTGTGGGTCAGGAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478859.5
ENST00000682772.1
CDS CAA 90 bp CTGGCGCAGCCACGTACACTTCTGGTTGAGAGATTTGGTATTTGGTaGGTGGCTCTGCAGAAAGGTGGGAGAGAGAAGACGGAGACAGAT +
Preference number: 6 (lower is better)
Translates to: LAQPRTLLVERFGIW*VALQKGGREKTETD
Trigger: ATCTGTCTCCGTCTTCTCTCTCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTGCGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CAA 90 bp ATGCTCCTCTCTCGGGGACCATCGGAGCCGGGCAGTTACTTACTCTaGTTGTTACTGTTCTCACTGACAAAATCTTCCGCACCATCGGTG +
Preference number: 6 (lower is better)
Translates to: MLLSRGPSEPGSYLL*LLLFSLTKSSAPSV
Trigger: CACCGATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACAACAAGAGTAAGTAACTGCCCGGCTCCGATGGTCCCCGAGAGAGGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491475.1
ENST00000611527.1
ENST00000613324.4
ENST00000636922.1
ENST00000683035.1
CDS CAA 90 bp TGGGTCCTGGGCTCTTCTCACAGGGAACCAGAGGACCTGTCCTGTTaGAAAAGCTTTGAATCTCGCCTTTGTAAACCCAGACTTCCCTCA +
Preference number: 6 (lower is better)
Translates to: WVLGSSHREPEDLSC*KSFESRLCKPRLPS
Trigger: TGAGGGAAGTCTGGGTTTACAAAGGCGAGATTCAAAGCTTTTCAAACAGGACAGGTCCTCTGGTTCCCTGTGAGAAGAGCCCAGGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 72 bp CAGCTATGTGTTTTCCCTGGTAACCCTGGGCCACAGTaGCATCTCACAATGGCGTCACACCCTAAAGATGCT +
Preference number: 6 (lower is better)
Translates to: QLCVFPGNPGPQ*HLTMASHPKDA
Trigger: AGCATCTTTAGGGTGTGACGCCATTGTGAGATGTCACTGTGGCCCAGGGTTACCAGGGAAAACACATAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS GCA 72 bp CCTCTTCCATATCTCCATGTGGACGTTAATCCCATCTaGACACTTCCTCTACGGGCATGGACTACGCGCAAT +
Preference number: 6 (lower is better)
Translates to: PLPYLHVDVNPI*TLPLRAWTTRN
Trigger: ATTGCGCGTAGTCCATGCCCGTAGAGGAAGTGTGCAGATGGGATTAACGTCCACATGGAGATATGGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000336553.10
ENST00000351936.11
ENST00000356226.8
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369058.7
ENST00000369059.5
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000491111.1
ENST00000604236.5
ENST00000613048.4
ENST00000636922.1
ENST00000682550.1
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
ENST00000684153.1
CDS GCA 72 bp TCCGCCAAGCAGCCACTTACGAAGAGTGAACACAACTaGAGCGCATTCAACGCAGCTGATCCAAAAAGGACT +
Preference number: 6 (lower is better)
Translates to: SAKQPLTKSEHN*SAFNAADPKRT
Trigger: AGTCCTTTTTGGATCAGCTGCGTTGAATGCGCTGCAGTTGTGTTCACTCTTCGTAAGTGGCTGCTTGGCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351936.11
ENST00000683035.1
ENST00000683211.1
CDS GCA 72 bp AGAGGAGAGAACGTCCAACAAAGGTCAGTGGAGGCCTaGTTATTCCCAGGAGAAGCTGTTCTTGCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: RGENVQQRSVEA*LFPGEAVLALQ
Trigger: TTGCAGAGCAAGAACAGCTTCTCCTGGGAATAAGCAGGCCTCCACTGACCTTTGTTGGACGTTCTCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS GCA 72 bp TGTGTGTATGCACGGTGTGTGTGTGTACATGGTGTGTaGGTGCACGGTGTGTGCATGTGCTTTCAGATAGCT +
Preference number: 6 (lower is better)
Translates to: CVYARCVCVHGV*VHGVCMCFQIA
Trigger: AGCTATCTGAAAGCACATGCACACACCGTGCACGCACACACCATGTACACACACACACCGTGCATACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp TGGCTCGGCCACTGGGATCACCTGGTGTTTTGTTCCTaGGTAGATTTCACATCAGGAAAGTCAACAGTGTCC +
Preference number: 6 (lower is better)
Translates to: WLGHWDHLVFCS*VDFTSGKSTVS
Trigger: GGACACTGTTGACTTTCCTGATGTGAAATCTACCCAGGAACAAAACACCAGGTGATCCCAGTGGCCGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp CAAAAACGAGATACATCAGGAGAGGTATTACTGGTGTaGCAAGTCCACTGGGGCACCGGCAGGAAAGACAAC +
Preference number: 6 (lower is better)
Translates to: QKRDTSGEVLLV*QVHWGTGRKDN
Trigger: GTTGTCTTTCCTGCCGGTGCCCCAGTGGACTTGCCACACCAGTAATACCTCTCCTGATGTATCTCGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS GCA 72 bp ACCCTGCCCAGCACCAAAGCAGCTCCACTATTTATCTaGCCGGTGCTTTGGGTCTTAATGATTCTAGTTGAC +
Preference number: 6 (lower is better)
Translates to: TLPSTKAAPLFI*PVLWVLMILVD
Trigger: GTCAACTAGAATCATTAAGACCCAAAGCACCGGGCAGATAAATAGTGGAGCTGCTTTGGTGCTGGGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS GCA 72 bp CAGGCAAAAATCACCACTCATTGCAGGGGGACCTTATaGTTGAGGATATCATGGGCAAGAAGCTCCAGCCAA +
Preference number: 6 (lower is better)
Translates to: QAKITTHCRGTL*LRISWARSSSQ
Trigger: TTGGCTGGAGCTTCTTGCCCATGATATCCTCAAGCATAAGGTCCCCCTGCAATGAGTGGTGATTTTTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 72 bp CACTATCTTCAACCCTACTCTCCACTGCTAAGAAGATaGAGCTTCTCCACGAGGTTGGAATCCGTACCTTCC +
Preference number: 6 (lower is better)
Translates to: HYLQPYSPLLRR*SFSTRLESVPS
Trigger: GGAAGGTACGGATTCCAACCTCGTGGAGAAGCTGCATCTTCTTAGCAGTGGAGAGTAGGGTTGAAGATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 72 bp CACGTACACTTCTGGTTGAGAGATTTGGTATTTGGTTaGTGGCTCTGCAGAAAGGTGGGAGAGAGAAGACGG +
Preference number: 6 (lower is better)
Translates to: HVHFWLRDLVFG*WLCRKVGERRR
Trigger: CCGTCTTCTCTCTCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CAA 72 bp CCACGTACACTTCTGGTTGAGAGATTTGGTATTTGGTaGGTGGCTCTGCAGAAAGGTGGGAGAGAGAAGACG +
Preference number: 6 (lower is better)
Translates to: PRTLLVERFGIW*VALQKGGREKT
Trigger: CGTCTTCTCTCTCCCACCTTTCTGCAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491475.1
CDS CAA 72 bp TCTCGGGGACCATCGGAGCCGGGCAGTTACTTACTCTaGTTGTTACTGTTCTCACTGACAAAATCTTCCGCA +
Preference number: 6 (lower is better)
Translates to: SRGPSEPGSYLL*LLLFSLTKSSA
Trigger: TGCGGAAGATTTTGTCAGTGAGAACAGTAACAACAAGAGTAAGTAACTGCCCGGCTCCGATGGTCCCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491475.1
ENST00000611527.1
ENST00000613324.4
ENST00000636922.1
ENST00000683035.1
CDS CAA 90 bp CAACCCTACTCTCCACTGCTAAGAAGATGCAGCTTCTCCACGAGGTaGGAATCCGTACCTTCCACCAATCTGATGTTTAAGGCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: QPYSPLLRRCSFSTR*ESVPSTNLMFKAEV
Trigger: GACTTCAGCCTTAAACATCAGATTGGTGGAAGGTACGGATTCCAACCTCGTGGAGAAGCTGCATCTTCTTAGCAGTGGAGAGTAGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS TCA 72 bp GTAGCTACAGGACTCAGATACGTGCAGCCACTTCAGTaGGGCAATGTGTGCTCTCTTCTACTATCCACTATC +
Preference number: 6 (lower is better)
Translates to: VATGLRYVQPLQ*GNVCSLLLSTI
Trigger: GATAGTGGATAGTAGAAGAGAGCACACATTGCCTCACTGAAGTGGCTGCACGTATCTGAGTCCTGTAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000683035.1
ENST00000683211.1
ENST00000683250.1
CDS TCA 72 bp TTGAGGCAGGAGGCAGAGAGACTCCTTTCAAAGCACTaGTTCTATTGCACCAGGCACACGTCACAAACACAA +
Preference number: 6 (lower is better)
Translates to: LRQEAERLLSKH*FYCTRHTSQTQ
Trigger: TTGTGTTTGTGACGTGTGCCTGGTGCAATAGAATCAGTGCTTTGAAAGGAGTCTCTCTGCCTCCTGCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS TCA 72 bp GCTCTTCTCACAGGGAACCAGAGGACCTGTCCTGTTTaGAAAGCTTTGAATCTCGCCTTTGTAAACCCAGAC +
Preference number: 6 (lower is better)
Translates to: ALLTGNQRTCPV*KALNLAFVNPD
Trigger: GTCTGGGTTTACAAAGGCGAGATTCAAAGCTTTTCAAACAGGACAGGTCCTCTGGTTCCCTGTGAGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 72 bp GGCACTATCATAATCTTGGCTTCCAAGTGGGGAAACTaGGGCACAGAGCAGTTAAGTAACCTGCCAAAAGCC +
Preference number: 6 (lower is better)
Translates to: GTIIILASKWGN*GTEQLSNLPKA
Trigger: GGCTTTTGGCAGGTTACTTAACTGCTCTGTGCCTCAGTTTCCCCACTTGGAAGCCAAGATTATGATAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 72 bp CGGTGTGATTCACAGCAAAAGCAAGAAAAGTATGTGTaGAGTGTGTGTGTGTGTACACGGTGTGTGTGCGTG +
Preference number: 6 (lower is better)
Translates to: RCDSQQKQEKYV*SVCVCTRCVCV
Trigger: CACGCACACACACCGTGTACACACACACACACTGCACACATACTTTTCTTGCTTTTGCTGTGAATCACACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp CTCTTAGTCCAACTGGGCTTTAGAAAGCTAAACTGTTaGAGGAGTCTGCTCACAGCTCCGTATTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LLVQLGFRKLNC*RSLLTAPYFCW
Trigger: CCAGCAGAAATACGGAGCTGTGAGCAGACTCCTCCAACAGTTTAGCTTTCTAAAGCCCAGTTGGACTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp GACATCTCACAATGGCGTCACACCCTAAAGATGCTTTaGAGGCTGAAGGAAAATGCGTATTTCCATGGGCTG +
Preference number: 6 (lower is better)
Translates to: DISQWRHTLKML*RLKENAYFHGL
Trigger: CAGCCCATGGAAATACGCATTTTCCTTCAGCCTCCAAAGCATCTTTAGGGTGTGACGCCATTGTGAGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 72 bp GGCTGGCAGAAGTCAGAAACCAAATTAGAAAACCACTaGAATCTAACTCCTCTGCCCTCCAGTCCATGCAGT +
Preference number: 6 (lower is better)
Translates to: GWQKSETKLENH*NLTPLPSSPCS
Trigger: ACTGCATGGACTGGAGGGCAGAGGAGTTAGATTCCAGTGGTTTTCTAATTTGGTTTCTGACTTCTGCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 72 bp ATGGGATTTAGGTGCACCCATATGATGCTGAAACAGTaGGAAGAGGGGCAAAACTATCGAAGCCAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: MGFRCTHMMLKQ*EEGQNYRSQER
Trigger: TCTCTCCTGGCTTCGATAGTTTTGCCCCTCTTCCCACTGTTTCAGCATCATATGGGTGCACCTAAATCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 72 bp TGTTTAAACACATTTCTGTGGAAGGTCACTGGTTTGTaGCCCTTTCTCCCTCACAGGCTTGGCACATGCTCG +
Preference number: 6 (lower is better)
Translates to: CLNTFLWKVTGL*PFLPHRLGTCS
Trigger: CGAGCATGTGCCAAGCCTGTGAGGGAGAAAGGGCAACAAACCAGTGACCTTCCACAGAAATGTGTTTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS CAA 72 bp GCAAAAATCACCACTCATTGCAGGGGGACCTTATGCTaGAGGATATCATGGGCAAGAAGCTCCAGCCAAACT +
Preference number: 6 (lower is better)
Translates to: AKITTHCRGTLC*RISWARSSSQT
Trigger: AGTTTGGCTGGAGCTTCTTGCCCATGATATCCTCAAGCATAAGGTCCCCCTGCAATGAGTGGTGATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CAA 72 bp GGCTCTTCTCACAGGGAACCAGAGGACCTGTCCTGTTaGAAAAGCTTTGAATCTCGCCTTTGTAAACCCAGA +
Preference number: 6 (lower is better)
Translates to: GSSHREPEDLSC*KSFESRLCKPR
Trigger: TCTGGGTTTACAAAGGCGAGATTCAAAGCTTTTCAAACAGGACAGGTCCTCTGGTTCCCTGTGAGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CAA 72 bp AAAAGCCACAAAGCTTGGAAGAGGTGCAGCCAAGATTaGAACCACATCAGTCTGATGCCAGAGCCCACTATC +
Preference number: 6 (lower is better)
Translates to: KSHKAWKRCSQD*NHISLMPEPTI
Trigger: GATAGTGGGCTCTGGCATCAGACTGATGTGGTTCAAATCTTGGCTGCACCTCTTCCAAGCTTTGTGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 90 bp TTGGAGACCTTACATATATATTCCCCAGCATCCGCCTCGGTCACATaGAACAGAGCCAGCACTTCTGCATTGGAACTATTTATCCCCGAG +
Preference number: 6 (lower is better)
Translates to: LETLHIYSPASASVT*NRASTSALELFIPE
Trigger: CTCGGGGATAAATAGTTCCAATGCAGAAGTGCTGGCTCTGTTCAATGTGACCGAGGCGGATGCTGGGGAATATATATGTAAGGTCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360144.7
ENST00000369056.5
ENST00000369058.7
ENST00000369059.5
ENST00000457416.6
ENST00000463870.5
ENST00000490349.5
ENST00000604236.5
CDS CAA 90 bp CACATCAGAAGCCAGGAACTTTCAGAGAACATCAAGACTTCCAGTTaGCATTGGTCCACAGGAACATCTCAAGCTCCACCTACAGAGCTC +
Preference number: 6 (lower is better)
Translates to: HIRSQELSENIKTSS*HWSTGTSQAPPTEL
Trigger: GAGCTCTGTAGGTGGAGCTTGAGATGTTCCTGTGGACCAATGCAAACTGGAAGTCTTGATGTTCTCTGAAAGTTCCTGGCTTCTGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CAA 90 bp AATCCAGTTGCATTTGCAACCTGGGTAGACATTTGGCTCTGGGTGTaGAATGCCCATAAACGCACCTATTCTTTTGAGGGTTCACCAGGG +
Preference number: 6 (lower is better)
Translates to: NPVAFATWVDIWLWV*NAHKRTYSFEGSPG
Trigger: CCCTGGTGAACCCTCAAAAGAATAGGTGCGTTTATGGGCATTCAACACCCAGAGCCAAATGTCTACCCAGGTTGCAAATGCAACTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 90 bp CATGAACAGGCAAAAATCACCACTCATTGCAGGGGGACCTTATGCTaGAGGATATCATGGGCAAGAAGCTCCAGCCAAACTAGTAAGAAC +
Preference number: 6 (lower is better)
Translates to: HEQAKITTHCRGTLC*RISWARSSSQTSKN
Trigger: GTTCTTACTAGTTTGGCTGGAGCTTCTTGCCCATGATATCCTCAAGCATAAGGTCCCCCTGCAATGAGTGGTGATTTTTGCCTGTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CAA 90 bp CAGAAGCCAGGAACTTTCAGAGAACATCAAGACTTCCAGTTTGCATaGGTCCACAGGAACATCTCAAGCTCCACCTACAGAGCTCAGAAA +
Preference number: 6 (lower is better)
Translates to: QKPGTFREHQDFQFA*VHRNISSSTYRAQK
Trigger: TTTCTGAGCTCTGTAGGTGGAGCTTGAGATGTTCCTGTGGACCAATGCAAACTGGAAGTCTTGATGTTCTCTGAAAGTTCCTGGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 72 bp CAAAAATCACCACTCATTGCAGGGGGACCTTATGCTTaGGGATATCATGGGCAAGAAGCTCCAGCCAAACTA +
Preference number: 6 (lower is better)
Translates to: QKSPLIAGGPYA*GYHGQEAPAKL
Trigger: TAGTTTGGCTGGAGCTTCTTGCCCATGATATCCTCAAGCATAAGGTCCCCCTGCAATGAGTGGTGATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 72 bp TCACTTAGCAGCCAGACTCAGGGTACAATCAGGAATTaGAATCGCTGCATCCAAACACCTACCCCAATTAGC +
Preference number: 6 (lower is better)
Translates to: SLSSQTQGTIRN*NRCIQTPTPIS
Trigger: GCTAATTGGGGTAGGTGTTTGGATGCAGCGATTTCAATTCCTGATTGTACCCTGAGTCTGGCTGCTAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS GCA 72 bp CCTAATTCATTCTGCATCAGGGCCGTGTGCTGTGGATaGTTAAGTACGCAGGTGTTTTCAAGACTAAGAAGG +
Preference number: 6 (lower is better)
Translates to: PNSFCIRAVCCG*LSTQVFSRLRR
Trigger: CCTTCTTAGTCTTGAAAACACCTGCGTACTTAAGCATCCACAGCACACGGCCCTGATGCAGAATGAATTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 72 bp TTCTGTCCTCCTAATTCATTCTGCATCAGGGCCGTGTaGTGTGGATGCTTAAGTACGCAGGTGTTTTCAAGA +
Preference number: 6 (lower is better)
Translates to: FCPPNSFCIRAV*CGCLSTQVFSR
Trigger: TCTTGAAAACACCTGCGTACTTAAGCATCCACAGCACACGGCCCTGATGCAGAATGAATTAGGAGGACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 72 bp GCCAGGAACTTTCAGAGAACATCAAGACTTCCAGTTTaGATTGGTCCACAGGAACATCTCAAGCTCCACCTA +
Preference number: 6 (lower is better)
Translates to: ARNFQRTSRLPV*IGPQEHLKLHL
Trigger: TAGGTGGAGCTTGAGATGTTCCTGTGGACCAATGCAAACTGGAAGTCTTGATGTTCTCTGAAAGTTCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 72 bp TCTGTCCTAATTCCTCCAGAGAGTCACTTGAGGACATaGAGACAGTCCTCTCTGGCTTCATTAGTGCCTTTA +
Preference number: 6 (lower is better)
Translates to: SVLIPPESHLRT*RQSSLASLVPL
Trigger: TAAAGGCACTAATGAAGCCAGAGAGGACTGTCTGCATGTCCTCAAGTGACTCTCTGGAGGAATTAGGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 72 bp CAGCCACGTACACTTCTGGTTGAGAGATTTGGTATTTaGTTGGTGGCTCTTCTGGCTCTAATGTGGTATCCT +
Preference number: 6 (lower is better)
Translates to: QPRTLLVERFGI*LVALLALMWYP
Trigger: AGGATACCACATTAGAGCCAGAAGAGCCACCAACCAAATACCAAATCTCTCAACCAGAAGTGTACGTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000346997.6
ENST00000351936.11
ENST00000358487.10
ENST00000359354.6
ENST00000369056.5
ENST00000369058.7
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000613324.4
ENST00000636922.1
ENST00000683035.1
ENST00000683211.1
ENST00000683678.1
CDS CCA 72 bp ATCTGTAATGGCAATTTTCAATGGTTCGAGAAGTTCTaGAAACACCGATTCTCTACTGGCCACGATGGGGCC +
Preference number: 6 (lower is better)
Translates to: ICNGNFQWFEKF*KHRFSTGHDGA
Trigger: GGCCCCATCGTGGCCAGTAGAGAATCGGTGTTTCCAGAACTTCTCGAACCATTGAAAATTGCCATTACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 72 bp TGGAAACTTATTGATGGCCAGGCTATTCAGTGGAAATaGGCTGCCTCTTGTCTTCGGTTTCAGAAACCAGTG +
Preference number: 6 (lower is better)
Translates to: WKLIDGQAIQWK*AASCLRFQKPV
Trigger: CACTGGTTTCTGAAACCGAAGACAAGAGGCAGCCCATTTCCACTGAATAGCCTGGCCATCAATAAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 72 bp CATTGGGGGCCATTCTTTGTTTCTCCCCAGTCCTTCTaGAAACTTATTGATGGCCAGGCTATTCAGTGGAAA +
Preference number: 6 (lower is better)
Translates to: HWGPFFVSPQSF*KLIDGQAIQWK
Trigger: TTTCCACTGAATAGCCTGGCCATCAATAAGTTTCCAGAAGGACTGGGGAGAAACAAAGAATGGCCCCCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CAA 72 bp GGTGAGGCGATCGCTCTTCTCAATCAGCGAGGTATATaGACCTTGTCCAGTTTACTCAGTGAGAGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: GEAIALLNQRGI*TLSSLLSESFS
Trigger: AGAAAAGCTCTCACTGAGTAAACTGGACAAGGTCAATATACCTCGCTGATTGAGAAGAGCGATCGCCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682772.1
CDS CAA 72 bp AGCCAGGAACTTTCAGAGAACATCAAGACTTCCAGTTaGCATTGGTCCACAGGAACATCTCAAGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: SQELSENIKTSS*HWSTGTSQAPP
Trigger: AGGTGGAGCTTGAGATGTTCCTGTGGACCAATGCAAACTGGAAGTCTTGATGTTCTCTGAAAGTTCCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CAA 72 bp GCATTTGCAACCTGGGTAGACATTTGGCTCTGGGTGTaGAATGCCCATAAACGCACCTATTCTTTTGAGGGT +
Preference number: 6 (lower is better)
Translates to: AFATWVDIWLWV*NAHKRTYSFEG
Trigger: ACCCTCAAAAGAATAGGTGCGTTTATGGGCATTCAACACCCAGAGCCAAATGTCTACCCAGGTTGCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 72 bp TCTCCACTGCTAAGAAGATGCAGCTTCTCCACGAGGTaGGAATCCGTACCTTCCACCAATCTGATGTTTAAG +
Preference number: 6 (lower is better)
Translates to: SPLLRRCSFSTR*ESVPSTNLMFK
Trigger: CTTAAACATCAGATTGGTGGAAGGTACGGATTCCAACCTCGTGGAGAAGCTGCATCTTCTTAGCAGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS TCA 72 bp TCCAGTATGGTGCTCTCTTGTTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCATCGGTGTCATCCTCAT +
Preference number: 6 (lower is better)
Translates to: SSMVLSCCYCSH*QNLPHHRCHPH
Trigger: ATGAGGATGACACCGATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACAACAAGAGAGCACCATACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000336553.10
ENST00000346997.6
ENST00000351936.11
ENST00000357555.9
ENST00000358487.10
ENST00000359354.6
ENST00000360144.7
ENST00000369056.5
ENST00000369058.7
ENST00000369060.8
ENST00000369061.8
ENST00000457416.6
ENST00000490349.5
ENST00000613048.4
ENST00000683211.1
ENST00000683678.1
CDS TCA 72 bp TGTCAGACATTTCATACCACGTCCACTTTACACAGATaGCGCTTGGGAACCATGAGGATCATGCAAAGCTCA +
Preference number: 6 (lower is better)
Translates to: CQTFHTTSTLHR*RLGTMRIMQSS
Trigger: TGAGCTTTGCATGATCCTCATGGTTCCCAAGCGTCATCTGTGTAAAGTGGACGTGGTATGAAATGTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359354.6
CDS TCA 72 bp CGGGCAGTTACTTACTCTTGTTGTTACTGTTCTCACTaGCAAAATCTTCCGCACCATCGGTGTCATCCTCAT +
Preference number: 6 (lower is better)
Translates to: RAVTYSCCYCSH*QNLPHHRCHPH
Trigger: ATGAGGATGACACCGATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACAACAAGAGTAAGTAACTGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491475.1
ENST00000611527.1
ENST00000613324.4
ENST00000636922.1
ENST00000683035.1
CDS TCA 72 bp GTGAGGCGATCGCTCTTCTCAATCAGCGAGGTATATTaGCCTTGTCCAGTTTACTCAGTGAGAGCTTTTCTA +
Preference number: 6 (lower is better)
Translates to: VRRSLFSISEVY*PCPVYSVRAFL
Trigger: TAGAAAAGCTCTCACTGAGTAAACTGGACAAGGTCAATATACCTCGCTGATTGAGAAGAGCGATCGCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682772.1
CDS TCA 72 bp AGCTCAGAAAGATTCAGGAGCGGGTTTAACGGCCAATaGTGCTTCCCCAAATCTTTCTGTCCTCCTAATTCA +
Preference number: 6 (lower is better)
Translates to: SSERFRSGFNGQ*CFPKSFCPPNS
Trigger: TGAATTAGGAGGACAGAAAGATTTGGGGAAGCATCATTGGCCGTTAAACCCGCTCCTGAATCTTTCTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 72 bp ACGCCTTCAATCACACTGGCAAAGACTGAGTCCAGATaGACAAATTTAGGTGGGATGAACTTTCACAGGGTG +
Preference number: 6 (lower is better)
Translates to: TPSITLAKTESR*TNLGGMNFHRV
Trigger: CACCCTGTGAAAGTTCATCCCACCTAAATTTGTTCATCTGGACTCAGTCTTTGCCAGTGTGATTGAAGGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS GCA 72 bp TGTGCTTATCTAAGTGTCAAAGTGATGGGATTTAGGTaGACCCATATGATGCTGAAACAGTGGGAAGAGGGG +
Preference number: 6 (lower is better)
Translates to: CAYLSVKVMGFR*THMMLKQWEEG
Trigger: CCCCTCTTCCCACTGTTTCAGCATCATATGGGTGCACCTAAATCCCATCACTTTGACACTTAGATAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 72 bp CCAAACACGAGTTCCTTCGCTCTGAGGAAATGTGGTTaGCGTCAATCTGTAATGGCAATTTTCAATGGTTCG +
Preference number: 6 (lower is better)
Translates to: PNTSSFALRKCG*RQSVMAIFNGS
Trigger: CGAACCATTGAAAATTGCCATTACAGATTGACGCCAACCACATTTCCTCAGAGCGAAGGAACTCGTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CCA 72 bp CTGGATAATGGATCCCCTCTCAGACCACCCGGATCATaGATCAATGCTGTGCTTATGAAATTCTACGAAAAC +
Preference number: 6 (lower is better)
Translates to: LDNGSPLRPPGS*INAVLMKFYEN
Trigger: GTTTTCGTAGAATTTCATAAGCACAGCATTGATCCATGATCCGGGTGGTCTGAGAGGGGATCCATTATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CCA 72 bp CCAGTTGCATTTGCAACCTGGGTAGACATTTGGCTCTaGGTGTTGAATGCCCATAAACGCACCTATTCTTTT +
Preference number: 6 (lower is better)
Translates to: PVAFATWVDIWL*VLNAHKRTYSF
Trigger: AAAAGAATAGGTGCGTTTATGGGCATTCAACACCCAGAGCCAAATGTCTACCCAGGTTGCAAATGCAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 72 bp TTTTGTTTAAACACATTTCTGTGGAAGGTCACTGGTTaGTTGCCCTTTCTCCCTCACAGGCTTGGCACATGC +
Preference number: 6 (lower is better)
Translates to: FCLNTFLWKVTG*LPFLPHRLGTC
Trigger: GCATGTGCCAAGCCTGTGAGGGAGAAAGGGCAACAAACCAGTGACCTTCCACAGAAATGTGTTTAAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS CAA 72 bp GCGATCGCTCTTCTCAATCAGCGAGGTATATTGACCTaGTCCAGTTTACTCAGTGAGAGCTTTTCTATCTCC +
Preference number: 6 (lower is better)
Translates to: AIALLNQRGILT*SSLLSESFSIS
Trigger: GGAGATAGAAAAGCTCTCACTGAGTAAACTGGACAAGGTCAATATACCTCGCTGATTGAGAAGAGCGATCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682772.1
CDS CAA 72 bp GGAACTTTCAGAGAACATCAAGACTTCCAGTTTGCATaGGTCCACAGGAACATCTCAAGCTCCACCTACAGA +
Preference number: 6 (lower is better)
Translates to: GTFREHQDFQFA*VHRNISSSTYR
Trigger: TCTGTAGGTGGAGCTTGAGATGTTCCTGTGGACCAATGCAAACTGGAAGTCTTGATGTTCTCTGAAAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 72 bp TACATATATATTCCCCAGCATCCGCCTCGGTCACATTaGACAGAGCCAGCACTTCTGCATTGGAACTATTTA +
Preference number: 6 (lower is better)
Translates to: YIYIPQHPPRSH*TEPALLHWNYL
Trigger: TAAATAGTTCCAATGCAGAAGTGCTGGCTCTGTTCAATGTGACCGAGGCGGATGCTGGGGAATATATATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360144.7
ENST00000369056.5
ENST00000369058.7
ENST00000369059.5
ENST00000457416.6
ENST00000463870.5
ENST00000490349.5
ENST00000604236.5
CDS TCA 72 bp CAAACACCTACCCCAATTAGCCTTCACGCTTGCTCTTaGAACCTGTTGTCAAAGGTAGAGCTGAGATTTCTT +
Preference number: 6 (lower is better)
Translates to: QTPTPISLHACS*NLLSKVELRFL
Trigger: AAGAAATCTCAGCTCTACCTTTGACAACAGGTTTCAAGAGCAAGCGTGAAGGCTAATTGGGGTAGGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 72 bp GTAACCAAACACGAGTTCCTTCGCTCTGAGGAAATGTaGTTGGCGTCAATCTGTAATGGCAATTTTCAATGG +
Preference number: 6 (lower is better)
Translates to: VTKHEFLRSEEM*LASICNGNFQW
Trigger: CCATTGAAAATTGCCATTACAGATTGACGCCAACCACATTTCCTCAGAGCGAAGGAACTCGTGTTTGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CAA 72 bp TTACATATATATTCCCCAGCATCCGCCTCGGTCACATaGAACAGAGCCAGCACTTCTGCATTGGAACTATTT +
Preference number: 6 (lower is better)
Translates to: LHIYSPASASVT*NRASTSALELF
Trigger: AAATAGTTCCAATGCAGAAGTGCTGGCTCTGTTCAATGTGACCGAGGCGGATGCTGGGGAATATATATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360144.7
ENST00000369056.5
ENST00000369058.7
ENST00000369059.5
ENST00000457416.6
ENST00000463870.5
ENST00000490349.5
ENST00000604236.5
CDS CAA 72 bp ACCAAACACGAGTTCCTTCGCTCTGAGGAAATGTGGTaGGCGTCAATCTGTAATGGCAATTTTCAATGGTTC +
Preference number: 6 (lower is better)
Translates to: TKHEFLRSEEMW*ASICNGNFQWF
Trigger: GAACCATTGAAAATTGCCATTACAGATTGACGCCAACCACATTTCCTCAGAGCGAAGGAACTCGTGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CAA 72 bp ACCTGGCAGTACACAGGGCTCCACCGAGTTACTTTCTaGTTTATCCTGATCCATTTCAGTGTGTCTGATAAA +
Preference number: 6 (lower is better)
Translates to: TWQYTGLHRVTF*FILIHFSVSDK
Trigger: TTTATCAGACACACTGAAATGGATCAGGATAAACAAGAAAGTAACTCGGTGGAGCCCTGTGTACTGCCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS CAA 90 bp ATCACTTTCCCAAAAGCTTCCCTGCCAGTTCCTCCGAAAGGCACTTaGACTTACAAAAACATGTTAGAAAGGCATCGAAGCCATCAAGAA +
Preference number: 6 (lower is better)
Translates to: ITFPKASLPVPPKGT*TYKNMLERHRSHQE
Trigger: TTCTTGATGGCTTCGATGCCTTTCTAACATGTTTTTGTAAGTCAAAGTGCCTTTCGGAGGAACTGGCAGGGAAGCTTTTGGGAAAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS TCA 72 bp AAGGAGCCACTGACATGGCTAAATTTGCACAGTGAGTaGCAGACGAGTGTTTATTTTGTTGGCAAGGATCAT +
Preference number: 6 (lower is better)
Translates to: KEPLTWLNLHSE*QTSVYFVGKDH
Trigger: ATGATCCTTGCCAACAAAATAAACACTCGTCTGTCACTCACTGTGCAAATTTAGCCATGTCAGTGGCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683885.1
CDS TCA 72 bp ATTGAAGGAGCCACTGACATGGCTAAATTTGCACAGTaGGTGACAGACGAGTGTTTATTTTGTTGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: IEGATDMAKFAQ*VTDECLFCWQG
Trigger: TCCTTGCCAACAAAATAAACACTCGTCTGTCACTCACTGTGCAAATTTAGCCATGTCAGTGGCTCCTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683885.1
CDS TCA 72 bp GTGCTTACAAACGCCTTCAATCACACTGGCAAAGACTaGGTCCAGATGAACAAATTTAGGTGGGATGAACTT +
Preference number: 6 (lower is better)
Translates to: VLTNAFNHTGKD*VQMNKFRWDEL
Trigger: AAGTTCATCCCACCTAAATTTGTTCATCTGGACTCAGTCTTTGCCAGTGTGATTGAAGGCGTTTGTAAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 72 bp TGCTGGAATTTCTGGCAGGTAGCCACTTCCCTCGGGTaGTATTTCAATCATCAAAGCTACACCTATAAAATC +
Preference number: 6 (lower is better)
Translates to: CWNFWQVATSLG*YFNHQSYTYKI
Trigger: GATTTTATAGGTGTAGCTTTGATGATTGAAATATCACCCGAGGGAAGTGGCTACCTGCCAGAAATTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 72 bp CGTCTGATGTACCCCAGGCTGTCCTTAGCTTTTCTCTaGGAATCCATCATAAATCAACTATTGACAGGTAGA +
Preference number: 6 (lower is better)
Translates to: RLMYPRLSLAFL*ESIINQLLTGR
Trigger: TCTACCTGTCAATAGTTGATTTATGATGGATTCCAAGAGAAAAGCTAAGGACAGCCTGGGGTACATCAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467584.1
CDS TCA 72 bp AGAGAGAGTGAAGTCTTCTCAATCAGCGAGGTATATTaGCCTTGTCCAGTTTACTCAGTGAGAGCTTTTCTA +
Preference number: 6 (lower is better)
Translates to: RESEVFSISEVY*PCPVYSVRAFL
Trigger: TAGAAAAGCTCTCACTGAGTAAACTGGACAAGGTCAATATACCTCGCTGATTGAGAAGACTTCACTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478859.5
CDS TCA 72 bp CTTAGCAAAGTAGTAACCAAAATCCCTGTATTCCTCTaGAACAGCCACCAACAGGGACTTGAACATTGTAGA +
Preference number: 6 (lower is better)
Translates to: LSKVVTKIPVFL*NSHQQGLEHCR
Trigger: TCTACAATGTTCAAGTCCCTGTTGGTGGCTGTTTCAGAGGAATACAGGGATTTTGGTTACTACTTTGCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CCA 72 bp ATGTGGTTGGCGTCAATCTGTAATGGCAATTTTCAATaGTTCGAGAAGTTCTGGAAACACCGATTCTCTACT +
Preference number: 6 (lower is better)
Translates to: MWLASICNGNFQ*FEKFWKHRFST
Trigger: AGTAGAGAATCGGTGTTTCCAGAACTTCTCGAACCATTGAAAATTGCCATTACAGATTGACGCCAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CAA 72 bp ATGGCGAATGACTACTACCGACTGAAAGCTTCTACTTaGCCAAGCACTGCTCAAAGAGTTTTTACATGTCAA +
Preference number: 6 (lower is better)
Translates to: MANDYYRLKAST*PSTAQRVFTCQ
Trigger: TTGACATGTAAAAACTCTTTGAGCAGTGCTTGGCAAAGTAGAAGCTTTCAGTCGGTAGTAGTCATTCGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS TCA 72 bp ACACGTCACAAACACAACATAACTCCACTTAAAGTGTaGGGCAGGTTTTGCTACAAACCAGTTCATGGTTTT +
Preference number: 6 (lower is better)
Translates to: TRHKHNITPLKV*GRFCYKPVHGF
Trigger: AAAACCATGAACTGGTTTGTAGCAAAACCTGCCTCACACTTTAAGTGGAGTTATGTTGTGTTTGTGACGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS TCA 72 bp TCAGACCACCCGGATCATGGATCAATGCTGTGCTTATaGAATTCTACGAAAACTTTTAGGAAATTGGCTCTA +
Preference number: 6 (lower is better)
Translates to: SDHPDHGSMLCL*NSTKTFRKLAL
Trigger: TAGAGCCAATTTCCTAAAAGTTTTCGTAGAATTTCATAAGCACAGCATTGATCCATGATCCGGGTGGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684516.1
CDS TCA 72 bp CACTGTAAATTCTTCATGTCTGCTAATAATGGCGAATaGCTACTACCGACTGAAAGCTTCTACTTTGCCAAG +
Preference number: 6 (lower is better)
Translates to: HCKFFMSANNGE*LLPTESFYFAK
Trigger: CTTGGCAAAGTAGAAGCTTTCAGTCGGTAGTAGTCATTCGCCATTATTAGCAGACATGAAGAATTTACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 90 bp CTGCTAATAATGGCGAATGACTACTACCGACTGAAAGCTTCTACTTaGCCAAGCACTGCTCAAAGAGTTTTTACATGTCAACACATTAAT +
Preference number: 6 (lower is better)
Translates to: LLIMANDYYRLKAST*PSTAQRVFTCQHIN
Trigger: ATTAATGTGTTGACATGTAAAAACTCTTTGAGCAGTGCTTGGCAAAGTAGAAGCTTTCAGTCGGTAGTAGTCATTCGCCATTATTAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS CAA 72 bp TTAGATAGGCTTAGCTTCCCAGGTCTTATCTTGATTTaGGGTTTCGACAGATCCTCTACGTTACAAAAGAAA +
Preference number: 6 (lower is better)
Translates to: LDRLSFPGLILI*GFDRSSTLQKK
Trigger: TTTCTTTTGTAACGTAGAGGATCTGTCGAAACCCAAAATCAAGATAAGACCTGGGAAGCTAAGCCTATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683029.1
ENST00000683250.1
CDS CAA 72 bp ATCTTTTCTGTGTTGGTCCAGTATGGTGCTCCTGTTTaGGAAAACAGTATTAGAATGTATACTGATGGACAG +
Preference number: 6 (lower is better)
Translates to: IFSVLVQYGAPV*ENSIRMYTDGQ
Trigger: CTGTCCATCAGTATACATTCTAATACTGTTTTCCAAAACAGGAGCACCATACTGGACCAACACAGAAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683418.1
CDS TCA 72 bp CATACATGTGGGAGGAAAGTACACAAACATTCTCATTaGTTTACTAAGCATTTGCAGAATGCAGGGGAATTT +
Preference number: 6 (lower is better)
Translates to: HTCGRKVHKHSH*FTKHLQNAGEF
Trigger: AAATTCCCCTGCATTCTGCAAATGCTTAGTAAATCAATGAGAATGTTTGTGTACTTTCCTCCCACATGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683035.1
ENST00000683211.1
CDS CCA 72 bp GCAAGTTGTTCTCAAAAGCCCTATCAACTTATCCATTaGAGCCTTACTTTAAGGGCAATCAATAGTATAAAT +
Preference number: 6 (lower is better)
Translates to: ASCSQKPYQLIH*SLTLRAINSIN
Trigger: ATTTATACTATTGATTGCCCTTAAAGTAAGGCTCCAATGGATAAGTTGATAGGGCTTTTGAGAACAACTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683418.1