Pregenerated sensors for FGFR1OP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000111790Ensembl transcript IDs: ENST00000229395.8, ENST00000538172.1, ENST00000546072.5
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCTTCTCTCCAGTCCATGTTGAGGTGCTTCAAGGATGTGTCGAGATaGATCAAGGAAGAATCCTTCGGACTTGTTACGATGTACCATGTC | + |
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Preference number: 5 (lower is better) Translates to: PSLQSMLRCFKDVSR*IKEESFGLVTMYHV Trigger: GACATGGTACATCGTAACAAGTCCGAAGGATTCTTCCTTGATGCATCTCGACACATCCTTGAAGCACCTCAACATGGACTGGAGAGAAGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229395.8 ENST00000546072.5 |
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| CDS GCA 90 bp | ATTCTGATTTGCTTCCAAGTGCCTTCTCTCCAGTCCATGTTGAGGTaGTTCAAGGATGTGTCGAGATGCATCAAGGAAGAATCCTTCGGA | + |
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Preference number: 5 (lower is better) Translates to: ILICFQVPSLQSMLR*FKDVSRCIKEESFG Trigger: TCCGAAGGATTCTTCCTTGATGCATCTCGACACATCCTTGAAGCACCTCAACATGGACTGGAGAGAAGGCACTTGGAAGCAAATCAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229395.8 ENST00000546072.5 |
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| CDS GCA 90 bp | GCACTTACATACACTATTGTTCAAAGTAACGGGAATGATAAAAATTaGCGACGCATTCAATCTCTTTTCCTCCCTGAAGTCTTCAATGAT | + |
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Preference number: 5 (lower is better) Translates to: ALTYTIVQSNGNDKN*RRIQSLFLPEVFND Trigger: ATCATTGAAGACTTCAGGGAGGAAAAGAGATTGAATGCGTCGGCAATTTTTATCATTCCCGTTACTTTGAACAATAGTGTATGTAAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538172.1 |
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| CDS GCA 72 bp | CTGCAACCTCCCACTCCCAGGTTCAAACAATTCTCTTaGTTTAGCCTCCCGAGCAGCTGGGATTACAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LQPPTPRFKQFS*FSLPSSWDYRH Trigger: GTGCCTGTAATCCCAGCTGCTCGGGAGGCTAAAGCAAGAGAATTGTTTGAACCTGGGAGTGGGAGGTTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538172.1 |
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| CDS GCA 72 bp | TGCTTCCAAGTGCCTTCTCTCCAGTCCATGTTGAGGTaGTTCAAGGATGTGTCGAGATGCATCAAGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: CFQVPSLQSMLR*FKDVSRCIKEE Trigger: TTCTTCCTTGATGCATCTCGACACATCCTTGAAGCACCTCAACATGGACTGGAGAGAAGGCACTTGGAAGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229395.8 ENST00000546072.5 |
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| CDS CAA 72 bp | CTGATTTGCTTCCAAGTGCCTTCTCTCCAGTCCATGTaGAGGTGCTTCAAGGATGTGTCGAGATGCATCAAG | + |
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Preference number: 6 (lower is better) Translates to: LICFQVPSLQSM*RCFKDVSRCIK Trigger: CTTGATGCATCTCGACACATCCTTGAAGCACCTCAACATGGACTGGAGAGAAGGCACTTGGAAGCAAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229395.8 ENST00000546072.5 |
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| CDS CAA 90 bp | CAGTTCATTCTGATTTGCTTCCAAGTGCCTTCTCTCCAGTCCATGTaGAGGTGCTTCAAGGATGTGTCGAGATGCATCAAGGAAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: QFILICFQVPSLQSM*RCFKDVSRCIKEES Trigger: GGATTCTTCCTTGATGCATCTCGACACATCCTTGAAGCACCTCAACATGGACTGGAGAGAAGGCACTTGGAAGCAAATCAGAATGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229395.8 |
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| CDS CAA 90 bp | GTGTACATTCTGATTTGCTTCCAAGTGCCTTCTCTCCAGTCCATGTaGAGGTGCTTCAAGGATGTGTCGAGATGCATCAAGGAAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: VYILICFQVPSLQSM*RCFKDVSRCIKEES Trigger: GGATTCTTCCTTGATGCATCTCGACACATCCTTGAAGCACCTCAACATGGACTGGAGAGAAGGCACTTGGAAGCAAATCAGAATGTACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546072.5 |
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| CDS GCA 72 bp | CAGTCCATGTTGAGGTGCTTCAAGGATGTGTCGAGATaGATCAAGGAAGAATCCTTCGGACTTGTTACGATG | + |
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Preference number: 6 (lower is better) Translates to: QSMLRCFKDVSR*IKEESFGLVTM Trigger: CATCGTAACAAGTCCGAAGGATTCTTCCTTGATGCATCTCGACACATCCTTGAAGCACCTCAACATGGACTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229395.8 ENST00000546072.5 |
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| CDS CAA 72 bp | ATGTGTCGAGATGCATCAAGGAAGAATCCTTCGGACTaGTTACGATGTACCATGTCAATCTTGGAGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: MCRDASRKNPSD*LRCTMSILECC Trigger: GCAGCACTCCAAGATTGACATGGTACATCGTAACAAGTCCGAAGGATTCTTCCTTGATGCATCTCGACACAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229395.8 ENST00000546072.5 |
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| CDS CAA 90 bp | GCTTCAAGGATGTGTCGAGATGCATCAAGGAAGAATCCTTCGGACTaGTTACGATGTACCATGTCAATCTTGGAGTGCTGCTCTTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: ASRMCRDASRKNPSD*LRCTMSILECCSFN Trigger: GTTAAAAGAGCAGCACTCCAAGATTGACATGGTACATCGTAACAAGTCCGAAGGATTCTTCCTTGATGCATCTCGACACATCCTTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229395.8 ENST00000546072.5 |
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| CDS CAA 90 bp | ATCCACACCCCAAAAGTTGACTGTTTATTTAGTGTACATTCTGATTaGCTTCCAAGTGCCTTCTCTCCAGTCCATGTTGAGGTGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: IHTPKVDCLFSVHSD*LPSAFSPVHVEVLQ Trigger: TTGAAGCACCTCAACATGGACTGGAGAGAAGGCACTTGGAAGCAAATCAGAATGTACACTAAATAAACAGTCAACTTTTGGGGTGTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546072.5 |
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| CDS TCA 72 bp | ACAACAGGAATACAAAGACTGTCAAGACATGTCCCCTaGTCTGAAGAAGCTTACAGTCTAGTGAAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: TTGIQRLSRHVP*SEEAYSLVKET Trigger: TGTCTCTTTCACTAGACTGTAAGCTTCTTCAGATCAGGGGACATGTCTTGACAGTCTTTGTATTCCTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538172.1 |
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| CDS TCA 72 bp | TGTCTGGAAGACAAGAAGTGTCACCAACATAACCCTTaGACTGTCTTGAAATGTCTTTCATTTCTAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: CLEDKKCHQHNP*TVLKCLSFLTP Trigger: GGGAGTTAGAAATGAAAGACATTTCAAGACAGTTCAAGGGTTATGTTGGTGACACTTCTTGTCTTCCAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538172.1 |
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| CDS CAA 72 bp | CCAAAAGTTGACTGTTTATTTAGTGTACATTCTGATTaGCTTCCAAGTGCCTTCTCTCCAGTCCATGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PKVDCLFSVHSD*LPSAFSPVHVE Trigger: CTCAACATGGACTGGAGAGAAGGCACTTGGAAGCAAATCAGAATGTACACTAAATAAACAGTCAACTTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546072.5 |
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| CDS GCA 72 bp | TACACTATTGTTCAAAGTAACGGGAATGATAAAAATTaGCGACGCATTCAATCTCTTTTCCTCCCTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: YTIVQSNGNDKN*RRIQSLFLPEV Trigger: GACTTCAGGGAGGAAAAGAGATTGAATGCGTCGGCAATTTTTATCATTCCCGTTACTTTGAACAATAGTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538172.1 |
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| CDS TCA 72 bp | TCCAAGAAACCCACGGAACTAATAAGCTGGAAGAAATaGCAAGGTAGTATCTTTGGCAAAGCACATTTAATA | + |
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Preference number: 6 (lower is better) Translates to: SKKPTELISWKK*QGSIFGKAHLI Trigger: TATTAAATGTGCTTTGCCAAAGATACTACCTTGTCATTTCTTCCAGCTTATTAGTTCCGTGGGTTTCTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538172.1 |
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