Pregenerated sensors for FGF7 (Homo sapiens)
Ensembl gene IDs: ENSG00000140285Ensembl transcript IDs: ENST00000267843.9, ENST00000560270.1, ENST00000560704.1, ENST00000560979.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTTCCTAGACTACAAATaGGTAAGAGGGATGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TDLDSCDSCISTQLRDLRFLDYK*VRGMEA Trigger: GGCCTCCATCCCTCTTACTCATTTGTAGTCTAGGAA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR GCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTCCATGTCTGTTGTCTaGCTGGTGCAACTTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRSMSVV*LVQLEP Trigger: AGGCTCAAGTTGCACCAGGCAGACAACAGACATGGA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTGTCTGTTGTCTGCCTaGTGCAACTTGAGCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRCLLSA*CNLSLS Trigger: AGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR GCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGGTATATCTACCCAGCTaGGTGACCTTAGGTGTATCA | + |
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Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRVYLPS*VTLGVS Trigger: TGATACACCTAAGGTCACGCAGCTGGGTAGATATAC...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTGTAGCCATTTGCTCTaGAGTCATGTCATTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRCSHLL*SHVIAS Trigger: GCTTGCAATGACATGACTCCAGAGCAAATGGCTACA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR TCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTTACTCCTAGGTCATTaGCCTCTTCCTATCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRLLLGH*PLPICE Trigger: TTCACAGATAGGAAGAGGTCAATGACCTAGGAGTAA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR GCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGCGTAGTAAGTTCAGTTaGTGTGACGCTGTTTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRRSKFS*CDAVCY Trigger: ATAGCAAACAGCGTCACAGCAACTGAACTTACTACG...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTCTGTAGAGCAAAGTTaGCAGGATCCATGTCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRSVEQS*QDPCQY Trigger: ATACTGACATGGATCCTGCCAACTTTGCTCTACAGA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR TCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGGATAATGTGAAAGCATaGTCTGTAGAGCAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRDNVKA*SVEQSW Trigger: CCAACTTTGCTCTACAGATCATGCTTTCACATTATC...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR TCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGCCCTGCAAGTCATTCTaGTGTATCAATTTTGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRPCKSF*CINFAY Trigger: GTAAGCAAAATTGATACATCAGAATGACTTGCAGGG...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR GCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGACATTTGTAGCCATTTaGTCTGGAGTCATGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRTFVAI*SGVMSL Trigger: CAATGACATGACTCCAGAGCAAATGGCTACAAATGT...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTCAAGTAAATGGCAGTaGAGTAGGGATGTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRSSKWQ*SRDVNQ Trigger: TTGGTTTACATCCCTACTCCACTGCCATTTACTTGA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGGTGATGTATTCTGATTaGCCAGTAATCACCCATACT | + |
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Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRVMYSD*PVITHT Trigger: AGTATGGGTGATTACTGGCCAATCAGAATACATCAC...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR TCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGAAACTATTTCTCAGCTaGAAAGTTCTCCAGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRKLFLS*KVLQQN Trigger: ATTCTGCTGGAGAACTTTTCAGCTGAGAAATAGTTT...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR TCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGATTAGTCATTGTGTATaGAGTGCATTGCCAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRISHCV*SALPRH Trigger: ATGTCTTGGCAATGCACTTCATACACAATGACTAAT...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CCA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTTATTCTTCATCTCTTaGGTCCCTTTTACTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDLDSCDSCISTQLRDLRLFFIS*VPFTLP Trigger: AGGCAAAGTAAAAGGGACCCAAGAGATGAAGAATAA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR GCA 90 bp | TTTTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTCCATGTCTGTTGTCTaGCTGGTGCAACTTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSGQGVYIFKLAWIIRSNSMSVV*LVQLEP Trigger: AGGCTCAAGTTGCACCAGGCAGACAACAGACATGGA...GTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR CCA 90 bp | TTTTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTGTCTGTTGTCTGCCTaGTGCAACTTGAGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSGQGVYIFKLAWIIRSNCLLSA*CNLSLS Trigger: AGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACA...GTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR TCA 90 bp | TTTTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTTACTCCTAGGTCATTaGCCTCTTCCTATCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSGQGVYIFKLAWIIRSNLLLGH*PLPICE Trigger: TTCACAGATAGGAAGAGGTCAATGACCTAGGAGTAA...GTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR GCA 90 bp | TTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTACGTAGTAAGTTCAGTTaGTGTGACGCTGTTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FRTRSIYFQIGLDYQVQLRSKFS*CDAVCY Trigger: ATAGCAAACAGCGTCACAGCAACTGAACTTACTACG...TAGTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR CCA 90 bp | TTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTATCTGTAGAGCAAAGTTaGCAGGATCCATGTCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FRTRSIYFQIGLDYQVQLSVEQS*QDPCQY Trigger: ATACTGACATGGATCCTGCCAACTTTGCTCTACAGA...TAGTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR TCA 90 bp | TTTTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACAAACTATTTCTCAGCTaGAAAGTTCTCCAGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSGQGVYIFKLAWIIRSNKLFLS*KVLQQN Trigger: ATTCTGCTGGAGAACTTTTCAGCTGAGAAATAGTTT...GTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR CCA 90 bp | TTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTATTATTCTTCATCTCTTaGGTCCCTTTTACTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FRTRSIYFQIGLDYQVQLLFFIS*VPFTLP Trigger: AGGCAAAGTAAAAGGGACCCAAGAGATGAAGAATAA...TAGTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR CAA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTCTGCCTGGTGCAACTaGAGCCTTTCTACTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TDLDSCDSCISTQLRDLRSAWCN*SLSTVA Trigger: AGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CAA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGAGAATTCCATGTCTGTaGTCTGCCTGGTGCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: TDLDSCDSCISTQLRDLRRIPCL*SAWCNL Trigger: CAAGTTGCACCAGGCAGACAACAGACATGGAATTCT...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CAA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTGTAATCATAACTTCTaGTGTGTCGCTCAGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TDLDSCDSCISTQLRDLRCNHNF*CVAQGW Trigger: CCAGCCCTGAGCGACACACAAGAAGTTATGATTACA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS GCA 90 bp | TGTCCTTTCATCCTTCAGGCTATTTCCTCTCAGAAAAGATTTCCATaGCCTTCTCCTTGTGTTGGGTTTGACAACCTGCGATGTGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: CPFILQAISSQKRFP*PSPCVGFDNLRCAL Trigger: TAGGGCACATCGCAGGTTGTCAAACCCAACACAAGGAGAAGGGCATGGAAATCTTTTCTGAGAGGAAATAGCCTGAAGGATGAAAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560704.1 |
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| CDS-3UTR CAA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGATCTGTAGAGCAAAGTaGGCAGGATCCATGTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: TDLDSCDSCISTQLRDLRICRAK*AGSMSV Trigger: TACTGACATGGATCCTGCCAACTTTGCTCTACAGAT...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CAA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGTGGGTCCCTTTTACTTaGCCTCTTTTATCGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: TDLDSCDSCISTQLRDLRWVPFT*PLLSIL Trigger: GAGGATCGATAAAAGAGGCAAAGTAAAAGGGACCCA...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS GCA 90 bp | CTTGTGTGTCGCTCAGGGCTGGAACAGTTCACATTTGTAGCCATTTaGTCTGGAGTCATGTCATTGCAAGCTAAAGATATAGTACCCACT | + |
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Preference number: 5 (lower is better) Translates to: LVCRSGLEQFTFVAI*SGVMSLQAKDIVPT Trigger: AGTGGGTACTATATCTTTAGCTTGCAATGACATGACTCCAGAGCAAATGGCTACAAATGTGAACTGTTCCAGCCCTGAGCGACACACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000267843.9 ENST00000560270.1 |
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| CDS-3UTR CAA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGCACATTTGTAGCCATTaGCTCTGGAGTCATGTCATT | + |
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Preference number: 5 (lower is better) Translates to: TDLDSCDSCISTQLRDLRHICSH*LWSHVI Trigger: AATGACATGACTCCAGAGCAAATGGCTACAAATGTG...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CAA 90 bp | ACTGATCTAGACTCTTGTGACAGCTGTATATCTACCCAGCTGCGTGACCTTAGGATTATTCTTCATCTCTaGGGTCCCTTTTACTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: TDLDSCDSCISTQLRDLRIILHL*GPFYFA Trigger: GGCAAAGTAAAAGGGACCCAAGAGATGAAGAATAAT...CCTAAGGTCACGCAGCTGGGTAGATATACAGCTGTCACAAGAGTCTAGATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267843.9 |
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| CDS-3UTR CAA 90 bp | TTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTATCTGCCTGGTGCAACTaGAGCCTTTCTACTGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: FRTRSIYFQIGLDYQVQLSAWCN*SLSTVA Trigger: AGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGA...TAGTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS CCA 90 bp | TTGCTAACAGCTGGATATATAAGAATTCCATGTCTGTTGTCTGCCTaGTGCAACTTGAGCCTTTCTACTGTAGCTACAAACTATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LLTAGYIRIPCLLSA*CNLSLSTVATNYFS Trigger: TGAGAAATAGTTTGTAGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTATATATCCAGCTGTTAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000267843.9 ENST00000560270.1 ENST00000560979.1 |
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| CDS-3UTR CAA 90 bp | TTTTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACAGAATTCCATGTCTGTaGTCTGCCTGGTGCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: FSGQGVYIFKLAWIIRSNRIPCL*SAWCNL Trigger: CAAGTTGCACCAGGCAGACAACAGACATGGAATTCT...GTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR CAA 90 bp | TTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTATGTAATCATAACTTCTaGTGTGTCGCTCAGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FRTRSIYFQIGLDYQVQLCNHNF*CVAQGW Trigger: CCAGCCCTGAGCGACACACAAGAAGTTATGATTACA...TAGTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS GCA 90 bp | TTTGTTGCTAACAGCTGGATATATAAGAATTCCATGTCTGTTGTCTaGCTGGTGCAACTTGAGCCTTTCTACTGTAGCTACAAACTATTT | + |
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Preference number: 5 (lower is better) Translates to: FVANSWIYKNSMSVV*LVQLEPFYCSYKLF Trigger: AAATAGTTTGTAGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTATATATCCAGCTGTTAGCAACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000267843.9 ENST00000560270.1 ENST00000560979.1 |
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| CDS-3UTR CAA 90 bp | TTTTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTGGGTCCCTTTTACTTaGCCTCTTTTATCGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: FSGQGVYIFKLAWIIRSNWVPFT*PLLSIL Trigger: GAGGATCGATAAAAGAGGCAAAGTAAAAGGGACCCA...GTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR CAA 90 bp | TTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTACACATTTGTAGCCATTaGCTCTGGAGTCATGTCATT | + |
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Preference number: 5 (lower is better) Translates to: FRTRSIYFQIGLDYQVQLHICSH*LWSHVI Trigger: AATGACATGACTCCAGAGCAAATGGCTACAAATGTG...TAGTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR CAA 90 bp | TTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTAATTATTCTTCATCTCTaGGGTCCCTTTTACTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: FRTRSIYFQIGLDYQVQLIILHL*GPFYFA Trigger: GGCAAAGTAAAAGGGACCCAAGAGATGAAGAATAAT...TAGTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS-3UTR CAA 90 bp | TTCAGGACAAGGAGTATATATTTTCAAATTGGCTTGGATTATCAGGTCCAACTATCCTTAATGTACATGTaGAGGTGTGTATCTTATTCC | + |
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Preference number: 5 (lower is better) Translates to: FRTRSIYFQIGLDYQVQLSLMYM*RCVSYS Trigger: GGAATAAGATACACACCTCAACATGTACATTAAGGA...TAGTTGGACCTGATAATCCAAGCCAATTTGAAAATATATACTCCTTGTCCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560270.1 |
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| CDS TCA 72 bp | GAAAAGATTTCCATGCCCTTCTCCTTGTGTTGGGTTTaGCAACCTGCGATGTGCCCTAAACTTACTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: EKISMPFSLCWV*QPAMCPKLTHS Trigger: AGAGTGAGTAAGTTTAGGGCACATCGCAGGTTGTCAAACCCAACACAAGGAGAAGGGCATGGAAATCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560704.1 |
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| CDS GCA 72 bp | ATCCTTCAGGCTATTTCCTCTCAGAAAAGATTTCCATaGCCTTCTCCTTGTGTTGGGTTTGACAACCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: ILQAISSQKRFP*PSPCVGFDNLR Trigger: TCGCAGGTTGTCAAACCCAACACAAGGAGAAGGGCATGGAAATCTTTTCTGAGAGGAAATAGCCTGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560704.1 |
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| CDS GCA 72 bp | CGCTCAGGGCTGGAACAGTTCACATTTGTAGCCATTTaGTCTGGAGTCATGTCATTGCAAGCTAAAGATATA | + |
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Preference number: 6 (lower is better) Translates to: RSGLEQFTFVAI*SGVMSLQAKDI Trigger: TATATCTTTAGCTTGCAATGACATGACTCCAGAGCAAATGGCTACAAATGTGAACTGTTCCAGCCCTGAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000267843.9 ENST00000560270.1 |
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| CDS CAA 72 bp | CTCTTATATCCCCTCCTTCCATGTAATCATAACTTCTaGTGTGTCGCTCAGGGCTGGAACAGTTCACATTTG | + |
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Preference number: 6 (lower is better) Translates to: LLYPLLPCNHNF*CVAQGWNSSHL Trigger: CAAATGTGAACTGTTCCAGCCCTGAGCGACACACAAGAAGTTATGATTACATGGAAGGAGGGGATATAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000267843.9 ENST00000560270.1 |
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| CDS GCA 72 bp | AACAGCTGGATATATAAGAATTCCATGTCTGTTGTCTaGCTGGTGCAACTTGAGCCTTTCTACTGTAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: NSWIYKNSMSVV*LVQLEPFYCSY Trigger: GTAGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTATATATCCAGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000267843.9 ENST00000560270.1 ENST00000560979.1 |
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| CDS CCA 72 bp | GCTGGATATATAAGAATTCCATGTCTGTTGTCTGCCTaGTGCAACTTGAGCCTTTCTACTGTAGCTACAAAC | + |
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Preference number: 6 (lower is better) Translates to: AGYIRIPCLLSA*CNLSLSTVATN Trigger: GTTTGTAGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTATATATCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000267843.9 ENST00000560270.1 ENST00000560979.1 |
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| CDS CCA 72 bp | TTGTGTGTCGCTCAGGGTTGTTTTGTTGCTAACAGCTaGATATATAAGAATTCCATGTCTGTTGTCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LCVAQGCFVANS*IYKNSMSVVCL Trigger: CAGGCAGACAACAGACATGGAATTCTTATATATCCAGCTGTTAGCAACAAAACAACCCTGAGCGACACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560979.1 |
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| CDS CAA 72 bp | CTCTTATATCCCCTCCTTCCATGTAATCATAACTTCTaGTGTGTCGCTCAGGGTTGTTTTGTTGCTAACAGC | + |
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Preference number: 6 (lower is better) Translates to: LLYPLLPCNHNF*CVAQGCFVANS Trigger: GCTGTTAGCAACAAAACAACCCTGAGCGACACACAAGAAGTTATGATTACATGGAAGGAGGGGATATAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560979.1 |
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| CDS CAA 72 bp | TTGCTAACAGCTGGATATATAAGAATTCCATGTCTGTaGTCTGCCTGGTGCAACTTGAGCCTTTCTACTGTA | + |
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Preference number: 6 (lower is better) Translates to: LLTAGYIRIPCL*SAWCNLSLSTV Trigger: TACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTATATATCCAGCTGTTAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000267843.9 ENST00000560270.1 ENST00000560979.1 |
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| CDS CAA 90 bp | GCTGGATATATAAGAATTCCATGTCTGTTGTCTGCCTGGTGCAACTaGAGCCTTTCTACTGTAGCTACAAACTATTTCTCAGCTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: AGYIRIPCLLSAWCN*SLSTVATNYFSAEK Trigger: CTTTTCAGCTGAGAAATAGTTTGTAGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTATATATCCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000267843.9 ENST00000560270.1 ENST00000560979.1 |
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| CDS CAA 90 bp | GTTGTTTTGTTGCTAACAGCTGGATATATAAGAATTCCATGTCTGTaGTCTGCCTGGTGCAACTTGAGCCTTTCTACTGTAGCTACAAAC | + |
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Preference number: 6 (lower is better) Translates to: VVLLLTAGYIRIPCL*SAWCNLSLSTVATN Trigger: GTTTGTAGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTATATATCCAGCTGTTAGCAACAAAACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560979.1 |
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| CDS CAA 90 bp | TTTGTTTTGTTGCTAACAGCTGGATATATAAGAATTCCATGTCTGTaGTCTGCCTGGTGCAACTTGAGCCTTTCTACTGTAGCTACAAAC | + |
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Preference number: 6 (lower is better) Translates to: FVLLLTAGYIRIPCL*SAWCNLSLSTVATN Trigger: GTTTGTAGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTATATATCCAGCTGTTAGCAACAAAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000267843.9 ENST00000560270.1 |
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| CDS CAA 72 bp | ATAAGAATTCCATGTCTGTTGTCTGCCTGGTGCAACTaGAGCCTTTCTACTGTAGCTACAAACTATTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: IRIPCLLSAWCN*SLSTVATNYFS Trigger: TGAGAAATAGTTTGTAGCTACAGTAGAAAGGCTCAAGTTGCACCAGGCAGACAACAGACATGGAATTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000267843.9 ENST00000560270.1 ENST00000560979.1 |
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| CDS CAA 72 bp | CCTGATTTCCATGATATTGTAATTATTCTTCATCTCTaGGGTCCCTTTTACTTTGCCTCTTTTATCGATCCT | + |
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Preference number: 6 (lower is better) Translates to: PDFHDIVIILHL*GPFYFASFIDP Trigger: AGGATCGATAAAAGAGGCAAAGTAAAAGGGACCCAAGAGATGAAGAATAATTACAATATCATGGAAATCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000267843.9 ENST00000560979.1 |
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