Pregenerated sensors for FGF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000186895Ensembl transcript IDs: ENST00000334134.4, ENST00000646078.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTaGATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GPSLPASCHTDPQMP*IAGSPLRAPTWALF Trigger: GAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR GCA 90 bp | TCAGTCTGCCAGGGCTGGCACTCAGGCCCTTCCCTGCCGGCTTCCTaGCACACAGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: SVCQGWHSGPSLPAS*HTDPQMPCIAGSPL Trigger: GAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCCTGAGTGCCAGCCCTGGCAGACTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR GCA 90 bp | TGGGAGGCTCCTCAGTCTGCCAGGGCTGGCACTCAGGCCCTTCCCTaGCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAG | + |
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Preference number: 1 (lower is better) Translates to: WEAPQSARAGTQALP*RLPATQTHKCPALQ Trigger: CTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCCTGAGTGCCAGCCCTGGCAGACTGAGGAGCCTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR GCA 90 bp | TTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTaGAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: FPAGFLPHRPTNALH*RQPPPSSDLGPLQF Trigger: GAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR TCA 90 bp | CCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCTaGTTTGAGCTGGCTCTGGAAATAGCTGAGAACCCAGACGCGGGA | + |
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Preference number: 1 (lower is better) Translates to: PSELRLGPSSVPTGP*FELALEIAENPDAG Trigger: TCCCGCGTCTGGGTTCTCAGCTATTTCCAGAGCCAGCTCAAATCAGGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTGGGAGGCTCCTCAGTCTGCCAGGGCTGGCACTCAGGCCCTTCCCTGCCGGCTCTGGAAATAGCTaGGAACCCAGACGCGGGACG | + |
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Preference number: 2 (lower is better) Translates to: APGRLLSLPGLALRPFPAGSGNS*EPRRGT Trigger: CGTCCCGCGTCTGGGTTCTCAGCTATTTCCAGAGCC...GGCAGGGAAGGGCCTGAGTGCCAGCCCTGGCAGACTGAGGAGCCTCCCAGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR CAA 90 bp | CCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTaGGGCCCTCTTCAGTTCCCACTGGACCCTGATTTGAGCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PTNALHCRQPPPSSD*GPLQFPLDPDLSWL Trigger: GAGCCAGCTCAAATCAGGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCGTTCCCACTGGACCCTaGTTTGAGCTGGCTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PSLPASCHTDPQMPCIAGVPTGP*FELALE Trigger: TTCCAGAGCCAGCTCAAATCAGGGTCCAGTGGGAAC...GCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCATCAGAGTCAAGAGGCTaGCACGCCAAGATGTCGCCA | + |
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Preference number: 2 (lower is better) Translates to: GPSLPASCHTDPQMPCIASESRG*HAKMSP Trigger: TGGCGACATCTTGGCGTGGCAGCCTCTTGACTCTGA...TGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCCACTGGACCCTGATTTaGGCTGGCTCTGGAAATAGC | + |
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Preference number: 2 (lower is better) Translates to: PSLPASCHTDPQMPCIAGHWTLI*AGSGNS Trigger: GCTATTTCCAGAGCCAGCTCAAATCAGGGTCCAGTG...GCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR GCA 72 bp | GGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTaGAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: GFLPHRPTNALH*RQPPPSSDLGP Trigger: AGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR GCA 72 bp | CTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATaGCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGA | + |
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Preference number: 3 (lower is better) Translates to: LPCRLPATQTHK*PALQAAPSELR Trigger: TCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR GCA 72 bp | CCTCAGTCTGCCAGGGCTGGCACTCAGGCCCTTCCCTaGCGGCTTCCTGCCACACAGACCCACAAATGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PQSARAGTQALP*RLPATQTHKCP Trigger: AGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCCTGAGTGCCAGCCCTGGCAGACTGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR TCA 72 bp | CTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCTaGTTTGAGCTGGCTCTGGAAATAGCTGAGAACCCA | + |
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Preference number: 3 (lower is better) Translates to: LRLGPSSVPTGP*FELALEIAENP Trigger: TGGGTTCTCAGCTATTTCCAGAGCCAGCTCAAATCAGGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | GCTCCTGGGAGGCTCCTCAGTCTGCCAGGGCTGGCACTCAGGCCCTTCCCTGCCCGGACAGCTGCGAGGTaGTCGGAGCGGGATCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: APGRLLSLPGLALRPFPARTAAR*SERDPA Trigger: CGCGGGATCCCGCTCCGAGCACCTCGCAGCTGTCCG...GGCAGGGAAGGGCCTGAGTGCCAGCCCTGGCAGACTGAGGAGCCTCCCAGGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR TCA 90 bp | GCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCTCTCCAGGCTGCCGTTaGCGCGGCCGCTCGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ALHCRQPPPSSDLGPLQFSPGCR*RGRSGA Trigger: TGCACCCGAGCGGCCGCGTCAACGGCAGCCTGGAGA...GAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | ATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTGGGCCGGGCGCCGTCTaGATACACTCGCCGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: MPCIAGSPLRAPTWALFSGPGAV*IHSPPA Trigger: CGCTGGCGGCGAGTGTATGCAGACGGCGCCCGGCCC...ACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | GCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCGGCAGCCGGACAGCTaGGAGGTGCTCGGAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: ALHCRQPPPSSDLGPLQFRQPDS*EVLGAG Trigger: TCCCGCTCCGAGCACCTCGCAGCTGTCCGGCTGCCG...GAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | GCTCCTGGGAGGCTCCTCAGTCTGCCAGGGCTGGCACTCAGGCCCTTCCCTGCCAGGTTATCCGGGCTCTaGTTCTGCCGCCGCCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: APGRLLSLPGLALRPFPARLSGL*FCRRRR Trigger: CCGACGGCGGCGGCAGAAGCAGAGCCCGGATAACCT...GGCAGGGAAGGGCCTGAGTGCCAGCCCTGGCAGACTGAGGAGCCTCCCAGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | CCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCTCCGGGCTCTGCTTCTaGCGCCGCCGTCGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSLPASCHTDPQMPCIAGSGLCF*RRRRGW Trigger: CCAGCCCCGACGGCGGCGGCAGAAGCAGAGCCCGGA...GCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGACAGTCTCTCGGCGCTaGGCTGCCGGCGGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LPATQTHKCPALQAAPSETVSRR*AAGGPQ Trigger: CTGGGGCCCGCCGGCAGCCCAGCGCCGAGAGACTGT...CTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCATCTCGTGGTCCCTGTaGTCCAGCACGCGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QAAPSELRLGPSSVPTGPISWSL*SSTRGR Trigger: CCTGCCCCGCGTGCTGGACCACAGGGACCACGAGAT...GGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCCAGGAGCTCTGGCGGTaGCCACCAGGCCCAGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: QAAPSELRLGPSSVPTGPQELWR*PPGPAS Trigger: ACTAGCTGGGCCTGGTGGCCACCGCCAGAGCTCCTG...GGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCTGATAGATTAGGCCCATCGTaGCATCGCGCCCGCCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: QPPPSSDLGPLQFPLDPDRLGPS*HRARPA Trigger: CGCGGGGCGGGCGCGATGCCACGATGGGCCTAATCT...ATCAGGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | TGCCACACAGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGTGTCGCCAGGAGCTCTaGCGGTGGCCACCAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: CHTDPQMPCIAGSPLRAPCRQEL*RWPPGP Trigger: TGGGCCTGGTGGCCACCGCCAGAGCTCCTGGCGACA...CGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | AGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCACGCGGCCGCTCGGGTaGAGCTGGAGGTGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: RPTNALHCRQPPPSSDLGTRPLG*SWRWYF Trigger: GAAGTACCACCTCCAGCTGCACCCGAGCGGCCGCGT...GCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | GCTCCTGGGAGGCTCCTCAGTCTGCCAGGGCTGGCACTCAGGCCCTTCCCTGCCTCCCTGCCGGCTTCCTaGCACACAGACCCACAAATG | + |
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Preference number: 4 (lower is better) Translates to: APGRLLSLPGLALRPFPASLPAS*HTDPQM Trigger: CATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGA...GGCAGGGAAGGGCCTGAGTGCCAGCCCTGGCAGACTGAGGAGCCTCCCAGGAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | AGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCGCTCGGGTGCAGCTaGAGGTGGTACTTCGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: RPTNALHCRQPPPSSDLGPLGCS*RWYFVA Trigger: CGCCACGAAGTACCACCTCCAGCTGCACCCGAGCGG...GCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCGTCCCCTCTTGTTCATaGCCAGGTACCGCCCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QAAPSELRLGPSSVPTGPVPSCS*PGTARR Trigger: TCTCCGGGCGGTACCTGGCCATGAACAAGAGGGGAC...GGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CACACAGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTCTGCCCCGCTGCTCCTaGGAGGCTCCTCAGTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: HTDPQMPCIAGSPLRAPTLPRCS*EAPQSA Trigger: GGCAGACTGAGGAGCCTCCCAGGAGCAGCGGGGCAG...AGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR TCA 90 bp | GCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGCGCGCCTGGAGATGCTaGCTCCGGCTTCGCGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: ALPCRLPATQTHKCPALQRAWRC*LRLRGK Trigger: TTTCCCGCGAAGCCGGAGTCAGCATCTCCAGGCGCG...CTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | GCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGTGCGGGGCCGGCCCTTaGCGTTCACAGACACGTACC | + |
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Preference number: 4 (lower is better) Translates to: ALPCRLPATQTHKCPALQCGAGP*RSQTRT Trigger: GGTACGTGTCTGTGAACGGCAAGGGCCGGCCCCGCA...CTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | GGCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGAGGCTCCTCAGTCTaGCAGGGCTGGCACTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GPSLPASCHTDPQMPCIAGGSSV*QGWHSG Trigger: GCCTGAGTGCCAGCCCTGGCAGACTGAGGAGCCTCC...TGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | CCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCACAAAGCCCCACACTaGCCCGCTGCTCCTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PFPAGFLPHRPTNALHCRHKAPH*PAAPGR Trigger: CCTCCCAGGAGCAGCGGGGCAGTGTGGGGCTTTGTG...CCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGAACAAAAGGCCGACGTaGTCCCCAGGCGGAGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PFPAGFLPHRPTNALHCRNKRPT*SPGGGA Trigger: CGCGCCTCCGCCTGGGGACCACGTCGGCCTTTTGTT...CCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | GCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCACTGGCCTCCAGCTaGGAGCCCAGTCTCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ALPCRLPATQTHKCPALQALASS*EPSLEA Trigger: GGCTTCGAGACTGGGCTCCCAGCTGGAGGCCAGTGC...CTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCCAGCTAGTGCGCACTaGCCTCCAGCTGGGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PFPAGFLPHRPTNALHCRPASAH*PPAGSP Trigger: TGGGCTCCCAGCTGGAGGCCAGTGCGCACTAGCTGG...CCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCTGATTCAGTCTGCCAGGGCTaGCACTCAGGCCCTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QPPPSSDLGPLQFPLDPDSVCQG*HSGPSL Trigger: CAGGGAAGGGCCTGAGTGCCAGCCCTGGCAGACTGA...ATCAGGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| 3UTR CAA 72 bp | GCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTaGGGCCCTCTTCAGTTCCCACTGGACCCTGATTTG | + |
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Preference number: 4 (lower is better) Translates to: ALHCRQPPPSSD*GPLQFPLDPDL Trigger: CAAATCAGGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR TCA 90 bp | GACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCTGCTGCGCAAAGCGCTaGAAGAAAGGACGGTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: DPQMPCIAGSPLRAPTWACCAKR*KKGRFA Trigger: GGCGAACCGTCCTTTCTTTCAGCGCTTTGCGCAGCA...GGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | AGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCAGCCCACTCTGTAGCTaGCGCACCATCTCGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RPTNALHCRQPPPSSDLGSPLCS*RTISWS Trigger: GGACCACGAGATGGTGCGGCAGCTACAGAGTGGGCT...GCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | CAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCACACAGACCCACAAATaGCCTGCATTGCAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QAAPSELRLGPSSVPTGPTQTHK*PALQAA Trigger: GGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGT...GGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | ATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTGGAGGTGGTACTTCGTaGCGCAGTAGAGCTTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: MPCIAGSPLRAPTWALFSGGGTS*RSRACG Trigger: GCCGCAAGCTCTACTGCGCCACGAAGTACCACCTCC...ACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | GGCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCATGCCGCACCATCTCGTaGTCCCTGTGGTCCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: GPSLPASCHTDPQMPCIACRTIS*SLWSST Trigger: CGTGCTGGACCACAGGGACCACGAGATGGTGCGGCA...TGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR TCA 90 bp | GGCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCTCTGGAAATAGCTaGGAACCCAGACGCGGGACG | + |
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Preference number: 4 (lower is better) Translates to: GPSLPASCHTDPQMPCIAGSGNS*EPRRGT Trigger: CGTCCCGCGTCTGGGTTCTCAGCTATTTCCAGAGCC...TGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | AGTCAGAGTCAAGAGGCTGCCACGCCAAGATGTCGCCAGGAGCTCTGGCGGTGGACAAATGCCCTGCATTaGAGGCAGCCCCCTCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SQSQEAATPRCRQELWRWTNALH*RQPPPS Trigger: GCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGT...CCACCGCCAGAGCTCCTGGCGACATCTTGGCGTGGCAGCCTCTTGACTCTGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CCA 90 bp | CACACAGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTCTCCGAGCTCCGACTTaGGCCCTCTTCAGTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: HTDPQMPCIAGSPLRAPTLRAPT*ALFSSH Trigger: GTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAG...AGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR TCA 90 bp | GCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCACTGGACCCTGATTTaGGCTGGCTCTGGAAATAGC | + |
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Preference number: 4 (lower is better) Translates to: ALHCRQPPPSSDLGPLQFHWTLI*AGSGNS Trigger: GCTATTTCCAGAGCCAGCTCAAATCAGGGTCCAGTG...GAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR TCA 90 bp | AGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCGTTCCCACTGGACCCTaGTTTGAGCTGGCTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RPTNALHCRQPPPSSDLGVPTGP*FELALE Trigger: TTCCAGAGCCAGCTCAAATCAGGGTCCAGTGGGAAC...GCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | CTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGTCAGAGTCAAGAGGCTaGCACGCCAAGATGTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LPATQTHKCPALQAAPSESESRG*HAKMSP Trigger: TGGCGACATCTTGGCGTGGCAGCCTCTTGACTCTGA...CTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR TCA 90 bp | AGTCAGAGTCAAGAGGCTGCCACGCCAAGATGTCGCCAGGAGCTCTGGCGGTGGTCCACCCAGGAGCAATaGAATTTCCGTTGCTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SQSQEAATPRCRQELWRWSTQEQ*NFRCCA Trigger: TGCGCAGCAACGGAAATTTCATTGCTCCTGGGTGGA...CCACCGCCAGAGCTCCTGGCGACATCTTGGCGTGGCAGCCTCTTGACTCTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR GCA 90 bp | GAGTCAGAGTCAAGAGGCTGCCACGCCAAGATGTCGCCAGGAGCTCTGGCGGTGAATGCCCACCTCCACTaGCGTTATCTCCAAAATACT | + |
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Preference number: 4 (lower is better) Translates to: ESESRGCHAKMSPGALAVNAHLH*RYLQNT Trigger: AGTATTTTGGAGATAACGGCAGTGGAGGTGGGCATT...CACCGCCAGAGCTCCTGGCGACATCTTGGCGTGGCAGCCTCTTGACTCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS GCA 90 bp | ATTAGGCCCATCGTGGCATCGCGCCCGCCCCGCGGCGGCGGCGGCTaGAGGCGAGCGCGGCGCCCATGGAAGGGGCGGCAGCCGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: IRPIVASRPPRGGGG*RRARRPWKGRQPDS Trigger: GCTGTCCGGCTGCCGCCCCTTCCATGGGCGCCGCGCTCGCCTGCAGCCGCCGCCGCCGCGGGGCGGGCGCGATGCCACGATGGGCCTAAT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS GCA 90 bp | GAGCGCGGCGCCCATGGAAGGGGCGGCAGCCGGACAGCTGCGAGGTaGTCGGAGCGGGATCCCGCGCCTGGAGATGCTGACTCCGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ERGAHGRGGSRTAAR*SERDPAPGDADSGF Trigger: GAAGCCGGAGTCAGCATCTCCAGGCGCGGGATCCCGCTCCGAGCACCTCGCAGCTGTCCGGCTGCCGCCCCTTCCATGGGCGCCGCGCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS GCA 90 bp | CGCTCGGGTGCAGCTGGAGGTGGTACTTCGTGGCGCAGTAGAGCTTaGGGCGCCGGGGCGCCCCGCCAAGGTGCTCGTAGACGCCGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RSGAAGGGTSWRSRA*GAGAPRQGARRRRH Trigger: GTGGCGGCGTCTACGAGCACCTTGGCGGGGCGCCCCGGCGCCGCAAGCTCTACTGCGCCACGAAGTACCACCTCCAGCTGCACCCGAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS CCA 90 bp | CGCCAGGAGCTCTGGCGGTGGCCACCAGGCCCAGCTAGTGCGCACTaGCCTCCAGCTGGGAGCCCAGTCTCGAAGCCTGAACGTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RQELWRWPPGPASAH*PPAGSPVSKPERER Trigger: CCTCTCACGTTCAGGCTTCGAGACTGGGCTCCCAGCTGGAGGCCAGTGCGCACTAGCTGGGCCTGGTGGCCACCGCCAGAGCTCCTGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS-3UTR CAA 90 bp | GCCCTGCATTGCAGGCAGCCCCCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCTTCTCCAGGCTGCCGTaGACGCGGCCGCTCGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ALHCRQPPPSSDLGPLQFFSRLP*TRPLGC Trigger: GCACCCGAGCGGCCGCGTCAACGGCAGCCTGGAGAA...GAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGGGGGCTGCCTGCAATGCAGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS CCA 90 bp | CCAGGGGGTCTGGGCAGCCCACTCTGTAGCTGCCGCACCATCTCGTaGTCCCTGTGGTCCAGCACGCGGGGCAGGAACAGGGAGGACTTC | + |
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Preference number: 5 (lower is better) Translates to: PGGLGSPLCSCRTIS*SLWSSTRGRNREDF Trigger: GAAGTCCTCCCTGTTCCTGCCCCGCGTGCTGGACCACAGGGACCACGAGATGGTGCGGCAGCTACAGAGTGGGCTGCCCAGACCCCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS CCA 90 bp | AGTCAAGAGGCTGCCACGCCAAGATGTCGCCAGGAGCTCTGGCGGTaGCCACCAGGCCCAGCTAGTGCGCACTGGCCTCCAGCTGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SQEAATPRCRQELWR*PPGPASAHWPPAGS Trigger: GCTCCCAGCTGGAGGCCAGTGCGCACTAGCTGGGCCTGGTGGCCACCGCCAGAGCTCCTGGCGACATCTTGGCGTGGCAGCCTCTTGACT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS CCA 90 bp | CTGGGCAGCCCACTCTGTAGCTGCCGCACCATCTCGTGGTCCCTGTaGTCCAGCACGCGGGGCAGGAACAGGGAGGACTTCTGTGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LGSPLCSCRTISWSL*SSTRGRNREDFCVR Trigger: CCGCACACAGAAGTCCTCCCTGTTCCTGCCCCGCGTGCTGGACCACAGGGACCACGAGATGGTGCGGCAGCTACAGAGTGGGCTGCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS-3UTR CAA 90 bp | CCTCCGAGCTCCGACTTGGGCCCTCTTCAGTTCCCACTGGACCCTGATTTGAGCTGTGTGCGGCGGGTCTaGAAGCCCCTGCGGGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: PPSSDLGPLQFPLDPDLSCVRRV*KPLRGR Trigger: CCGGCCCCGCAGGGGCTTCAAGACCCGCCGCACACA...GCTCAAATCAGGGTCCAGTGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS CCA 90 bp | AGTCAGAGTCAAGAGGCTGCCACGCCAAGATGTCGCCAGGAGCTCTaGCGGTGGCCACCAGGCCCAGCTAGTGCGCACTGGCCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SQSQEAATPRCRQEL*RWPPGPASAHWPPA Trigger: AGCTGGAGGCCAGTGCGCACTAGCTGGGCCTGGTGGCCACCGCCAGAGCTCCTGGCGACATCTTGGCGTGGCAGCCTCTTGACTCTGACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS-3UTR CAA 90 bp | AGTCAGAGTCAAGAGGCTGCCACGCCAAGATGTCGCCAGGAGCTCTGGCGGTGGCTGCGGGGCCGGCCCTaGCCGTTCACAGACACGTAC | + |
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Preference number: 5 (lower is better) Translates to: SQSQEAATPRCRQELWRWLRGRP*PFTDTY Trigger: GTACGTGTCTGTGAACGGCAAGGGCCGGCCCCGCAG...CCACCGCCAGAGCTCCTGGCGACATCTTGGCGTGGCAGCCTCTTGACTCTGACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS CCA 90 bp | CTGACTCCGGCTTCGCGGGAAAGGTGGGGGAAGAAGGGGGAAGGGTaGGCGAGAGAGAGAAAGAGAGGGAGAGTGGGAGAGGGAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LTPASRERWGKKGEG*ARERKRGRVGEGEG Trigger: TCCCTCTCCCTCTCCCACTCTCCCTCTCTTTCTCTCTCTCGCCCACCCTTCCCCCTTCTTCCCCCACCTTTCCCGCGAAGCCGGAGTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGGCAGCCCCCTCCGAGCCTCCGAGCTCCGACTaGGGCCCTCTTCAGTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LPATQTHKCPALQAAPSEPPSSD*GPLQFP Trigger: TGGGAACTGAAGAGGGCCCAAGTCGGAGCTCGGAGG...CTCGGAGGGGGCTGCCTGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS TCA 90 bp | CCGTTATCTCCAAAATACTGTAGGCGCTGTTCTCCAGGCTGCCGTTaGCGCGGCCGCTCGGGTGCAGCTGGAGGTGGTACTTCGTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PLSPKYCRRCSPGCR*RGRSGAAGGGTSWR Trigger: GCGCCACGAAGTACCACCTCCAGCTGCACCCGAGCGGCCGCGTCAACGGCAGCCTGGAGAACAGCGCCTACAGTATTTTGGAGATAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS-3UTR CAA 90 bp | GGCCCTTCCCTGCCGGCTTCCTGCCACACAGACCCACAAATGCCCTGCATTGCAGCAATGAAATTTCCGTaGCTGCGCAAAGCGCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: GPSLPASCHTDPQMPCIAAMKFP*LRKALK Trigger: TTTCAGCGCTTTGCGCAGCAACGGAAATTTCATTGC...TGCAATGCAGGGCATTTGTGGGTCTGTGTGGCAGGAAGCCGGCAGGGAAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS GCA 72 bp | GCGCGGCGCCCATGGAAGGGGCGGCAGCCGGACAGCTaGGAGGTGCTCGGAGCGGGATCCCGCGCCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: ARRPWKGRQPDS*EVLGAGSRAWR Trigger: TCTCCAGGCGCGGGATCCCGCTCCGAGCACCTCGCAGCTGTCCGGCTGCCGCCCCTTCCATGGGCGCCGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS CCA 72 bp | CGCGGCCGCTCGGGTGCAGCTGGAGGTGGTACTTCGTaGCGCAGTAGAGCTTGCGGCGCCGGGGCGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: RGRSGAAGGGTS*RSRACGAGAPR Trigger: GCGGGGCGCCCCGGCGCCGCAAGCTCTACTGCGCCACGAAGTACCACCTCCAGCTGCACCCGAGCGGCCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS GCA 72 bp | GCCCATGGAAGGGGCGGCAGCCGGACAGCTGCGAGGTaGTCGGAGCGGGATCCCGCGCCTGGAGATGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: AHGRGGSRTAAR*SERDPAPGDAD Trigger: GTCAGCATCTCCAGGCGCGGGATCCCGCTCCGAGCACCTCGCAGCTGTCCGGCTGCCGCCCCTTCCATGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS CCA 72 bp | GCTGCCACGCCAAGATGTCGCCAGGAGCTCTGGCGGTaGCCACCAGGCCCAGCTAGTGCGCACTGGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: AATPRCRQELWR*PPGPASAHWPP Trigger: TGGAGGCCAGTGCGCACTAGCTGGGCCTGGTGGCCACCGCCAGAGCTCCTGGCGACATCTTGGCGTGGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS CCA 72 bp | CTGGGCAGCCCACTCTGTAGCTGCCGCACCATCTCGTaGTCCCTGTGGTCCAGCACGCGGGGCAGGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: LGSPLCSCRTIS*SLWSSTRGRNR Trigger: CCTGTTCCTGCCCCGCGTGCTGGACCACAGGGACCACGAGATGGTGCGGCAGCTACAGAGTGGGCTGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS CCA 72 bp | CAAGAGGCTGCCACGCCAAGATGTCGCCAGGAGCTCTaGCGGTGGCCACCAGGCCCAGCTAGTGCGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: QEAATPRCRQEL*RWPPGPASAHW Trigger: CCAGTGCGCACTAGCTGGGCCTGGTGGCCACCGCCAGAGCTCCTGGCGACATCTTGGCGTGGCAGCCTCTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS GCA 72 bp | CCCTTACCAGGGGGTCTGGGCAGCCCACTCTGTAGCTaGCGCACCATCTCGTGGTCCCTGTGGTCCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: PLPGGLGSPLCS*RTISWSLWSST Trigger: CGTGCTGGACCACAGGGACCACGAGATGGTGCGGCAGCTACAGAGTGGGCTGCCCAGACCCCCTGGTAAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS CCA 72 bp | CCACTCTGTAGCTGCCGCACCATCTCGTGGTCCCTGTaGTCCAGCACGCGGGGCAGGAACAGGGAGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: PLCSCRTISWSL*SSTRGRNREDF Trigger: GAAGTCCTCCCTGTTCCTGCCCCGCGTGCTGGACCACAGGGACCACGAGATGGTGCGGCAGCTACAGAGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334134.4 ENST00000646078.1 |
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| CDS CCA 72 bp | GGGAAGGGTGGGCGAGAGAGAGAAAGAGAGGGAGAGTaGGAGAGGGAGAGGGAGAGAGGGAACGCGAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: GKGGREREREGE*ERERERGNASP Trigger: GGGACTCGCGTTCCCTCTCTCCCTCTCCCTCTCCCACTCTCCCTCTCTTTCTCTCTCTCGCCCACCCTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS TCA 72 bp | CCAAAATACTGTAGGCGCTGTTCTCCAGGCTGCCGTTaGCGCGGCCGCTCGGGTGCAGCTGGAGGTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: PKYCRRCSPGCR*RGRSGAAGGGT Trigger: AGTACCACCTCCAGCTGCACCCGAGCGGCCGCGTCAACGGCAGCCTGGAGAACAGCGCCTACAGTATTTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS GCA 72 bp | GAAGAGACCCCTGATGGCCACAATGCCCACCTCCACTaGCGTTATCTCCAAAATACTGTAGGCGCTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: EETPDGHNAHLH*RYLQNTVGAVL Trigger: GAGAACAGCGCCTACAGTATTTTGGAGATAACGGCAGTGGAGGTGGGCATTGTGGCCATCAGGGGTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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| CDS GCA 72 bp | CTGCCGTTATCTCCAAAATACACCAAGAAGTTTGGATaGTGTGCGACTCCGAGGGGGAGCCTGGCTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPLSPKYTKKFG*CATPRGSLALE Trigger: CTCCAAAGCCAGGCTCCCCCTCGGAGTCGCACAGCATCCAAACTTCTTGGTGTATTTTGGAGATAACGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646078.1 |
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| CDS GCA 72 bp | GTTATCTCCAAAATACACCAAGAAGTTTGGATGCTGTaGGACTCCGAGGGGGAGCCTGGCTTTGGAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: VISKIHQEVWML*DSEGEPGFGEN Trigger: GTTCTCTCCAAAGCCAGGCTCCCCCTCGGAGTCGCACAGCATCCAAACTTCTTGGTGTATTTTGGAGATAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646078.1 |
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| CDS GCA 72 bp | GAAGAGACCCCTGATGGCCACAATGCCCACCTCCACTaGCGTTATCTCCAAAATACACCAAGAAGTTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: EETPDGHNAHLH*RYLQNTPRSLD Trigger: ATCCAAACTTCTTGGTGTATTTTGGAGATAACGGCAGTGGAGGTGGGCATTGTGGCCATCAGGGGTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646078.1 |
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| CDS CAA 90 bp | AACGCGAGTCCCTTTAATTTCCACCCAGGAGCAATGAAATTTCCGTaGCTGCGCAAAGCGCTGAAAGAAAGGACGGTTCGCCAACAAAAG | + |
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Preference number: 6 (lower is better) Translates to: NASPFNFHPGAMKFP*LRKALKERTVRQQK Trigger: CTTTTGTTGGCGAACCGTCCTTTCTTTCAGCGCTTTGCGCAGCAACGGAAATTTCATTGCTCCTGGGTGGAAATTAAAGGGACTCGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334134.4 |
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