Pregenerated sensors for FGF20 (Homo sapiens)
Ensembl gene IDs: ENSG00000078579Ensembl transcript IDs: ENST00000180166.6, ENST00000519941.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGTCCAGCAGCAACCATGTaGGGGTTCCCATTATCCACA | + |
|
Preference number: 2 (lower is better) Translates to: KVFCLGVACFIVHVSPRCPAATM*GFPLST Trigger: TGTGGATAATGGGAACCCTCACATGGTTGCTGCTGG...ACACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| 3UTR-3UTR CCA 90 bp | CCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGCTTCAGTCTACTATGACAAGAAAGAATaGTTGTGGTTTGACTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PCEGSHYPQFNRFLASVYYDKKE*LWFDSS Trigger: GGAAGAGTCAAACCACAACCATTCTTTCTTGTCATA...GTAGACTGAAGCCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| 3UTR CAA 90 bp | ACCTGTGAATTCTACAAGGTCCTCAGAATTTATGTAGCAATGCTCTaGGCTAAGTCAATCCATTTCTTCAACATGAAGTCTCTATTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TCEFYKVLRIYVAML*AKSIHFFNMKSLFL Trigger: TAAAAATAGAGACTTCATGTTGAAGAAATGGATTGACTTAGCCAAGAGCATTGCTACATAAATTCTGAGGACCTTGTAGAATTCACAGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTCTATGGTTAAGGTGGTATAATAATGTCCTCTTTACAGAGCAAGACACCTATGTAGCAATGCTCTaGGCTAAGTCAATCCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LILWLRWYNNVLFTEQDTYVAML*AKSIHF Trigger: GAAATGGATTGACTTAGCCAAGAGCATTGCTACATA...GGTGTCTTGCTCTGTAAAGAGGACATTATTATACCACCTTAACCATAGAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGCAGCAACCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGAGGATGCCGTGCAGGTaGGCCAGCTGCGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSSNHVRVPIIHSLTDFWRMPCR*ASCAAP Trigger: GGGGGCTGCGCAGCTGGCGCACCTGCACGGCATCCT...CCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGGTTGCTGCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGTGCCGGCGGCGCAGGATaGCGTGCAGGTGCGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVFCLGVACFIVHVSPRCAGGAG*RAGAPA Trigger: AGCTGGCGCACCTGCACGGCATCCTGCGCCGCCGGC...ACACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGGGGTGCCCTGCACGCTaGCGTCGGGCAGGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSVLSWCGMFHSSCFTQVGCPAR*RRAGSA Trigger: TGCAGATCCTGCCCGACGGCAGCGTGCAGGGCACCC...CACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | GGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTATCCTGCCGGGTGCCCTaGACGCTGCCGTCGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNYDKKEWLWFDSSIMSLSCRVP*TLPSGR Trigger: CCTGCCCGACGGCAGCGTGCAGGGCACCCGGCAGGA...TAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGTGCGAACCCACCTGCTaGCCCAAGCCCTCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSVLSWCGMFHSSCFTQVCEPTC*PKPSRP Trigger: CGGCCTGGAGGGCTTGGGCCAGCAGGTGGGTTCGCA...CACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | TATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCCTGCCGGGTGCCCTaGACGCTGCCGTCGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YDGNYDKKEWLWFDSSIMSCRVP*TLPSGR Trigger: CCTGCCCGACGGCAGCGTGCAGGGCACCCGGCAGGA...CATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR TCA 90 bp | GATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCAGCCCGGTTACTCCTCTaGGGTCGCTCCGGAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: DGNYDKKEWLWFDSSIMSARLLL*GRSGGT Trigger: AGTCCCTCCGGAGCGACCTCAGAGGAGTAACCGGGC...TGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | TATTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATGTGGTCCTGCCGGGTaGCCTGCACGCTGCCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YFMMGTMTRKNGCGLTLPCGPAG*PARCRR Trigger: CCGACGGCAGCGTGCAGGGCACCCGGCAGGACCACA...TGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR GCA 90 bp | TTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATATGTGGTCCTGCCGGGTaGCCTGCACGCTGCCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FYDGNYDKKEWLWFDSSICGPAG*PARCRR Trigger: CCGACGGCAGCGTGCAGGGCACCCGGCAGGACCACA...TATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CCA 90 bp | CCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGCTTCAGTCTACCGGCTAAGGGAGCCATaGAGGGGGAGATCCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PCEGSHYPQFNRFLASVYRLREP*RGRSGT Trigger: TGTTCCGGATCTCCCCCTCCATGGCTCCCTTAGCCG...GTAGACTGAAGCCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | TGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGTTGTTTAGTTATACCGAAGAGGCTGTaGTCCTGCCGGGTGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLGVACFIVHVSPRCCLVIPKRL*SCRVPC Trigger: GCAGGGCACCCGGCAGGACCACAGCCTCTTCGGTAT...AACTAAACAACACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | GATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCAAAATGCGAACCCACCTaGTGGCCCAAGCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DGNYDKKEWLWFDSSIMSKCEPT*WPKPSR Trigger: CCTGGAGGGCTTGGGCCAGCAGGTGGGTTCGCATTT...TGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGACTAGGGCTGTTGGCTaGGGCTCCAATTCCGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSVLSWCGMFHSSCFTQVTRAVG*GSNSAN Trigger: GTTTGCGGAATTGGAGCCCCAGCCAACAGCCCTAGT...CACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGGATGCCTCTTGGACCTaGCGCCATCTCTTGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSVLSWCGMFHSSCFTQVDASWT*RHLLEF Trigger: GAACTCCAAGAGATGGCGCCAGGTCCAAGAGGCATC...CACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | TATTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATCTCCGAAGAGGCTGTaGTCCTGCCGGGTGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YFMMGTMTRKNGCGLTLPSPKRL*SCRVPC Trigger: GCAGGGCACCCGGCAGGACCACAGCCTCTTCGGAGA...TGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519941.1 |
||
| CDS-3UTR GCA 90 bp | TATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGGGAGGCAACAGGAAATaGGAACCCACCTGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YDGNYDKKEWLWFDSSIMGGNRK*EPTCWP Trigger: GGGCCAGCAGGTGGGTTCGCATTTCCTGTTGCCTCC...CATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | ACCAGCAGCAACCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGCCTGGCGCCATCTCTTaGAGTTCCGTCTTTGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSSNHVRVPIIHSLTDFWPGAIS*SSVFVK Trigger: CTTAACAAAGACGGAACTCCAAGAGATGGCGCCAGG...CCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGGTTGCTGCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | GGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTAGATGCCTCTTGGACCTaGCGCCATCTCTTGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNYDKKEWLWFDSSIMSLDASWT*RHLLEF Trigger: GAACTCCAAGAGATGGCGCCAGGTCCAAGAGGCATC...TAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGACTGACCAGTCCCACTaGCACACTGATGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSVLSWCGMFHSSCFTQVTDQSH*HTDEFQ Trigger: TTGGAATTCATCAGTGTGGCAGTGGGACTGGTCAGT...CACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | AACCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGCTTCAGTCTGTGCCACAAAATACCTaGGGCCAGTGTCTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NHVRVPIIHSLTDFWLQSVPQNT*GQCLHV Trigger: AACATGGAGACACTGGCCGCAGGTATTTTGTGGCAC...AGACTGAAGCCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | CCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGCTTCAGTCTACAAGCTCTCACTGTCTTaGAGCGATCTTCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PCEGSHYPQFNRFLASVYKLSLS*SDLLSL Trigger: CAAGGAGAGAAGATCGCTCCAAGACAGTGAGAGCTT...GTAGACTGAAGCCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGCAGCAACCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGCAGTTCTCTTCAAACTaGTCCCTAAAGATGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSSNHVRVPIIHSLTDFWQFSSN*SLKMHS Trigger: CGAATGCATCTTTAGGGAGCAGTTTGAAGAGAACTG...CCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGGTTGCTGCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | TATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTATCGCACGTGCCACAAAATACCTaGGGCCAGTGTCTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YDKKEWLWFDSSIMSLSHVPQNT*GQCLHV Trigger: AACATGGAGACACTGGCCGCAGGTATTTTGTGGCAC...GTGCGATAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CCA 90 bp | TATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTATCGCACATTTCTGATGCCTCTTaGACCTGGCGCCATCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YDKKEWLWFDSSIMSLSHISDAS*TWRHLL Trigger: CAAGAGATGGCGCCAGGTCCAAGAGGCATCAGAAAT...GTGCGATAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CCA 90 bp | GATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCAATTTCTGATGCCTCTTaGACCTGGCGCCATCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DGNYDKKEWLWFDSSIMSISDAS*TWRHLL Trigger: CAAGAGATGGCGCCAGGTCCAAGAGGCATCAGAAAT...TGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR TCA 90 bp | TATTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCACCAGCAGCAACCATGTaGGGGTTCCCATTATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YFMMGTMTRKNGCGLTLPPAATM*GFPLST Trigger: TGTGGATAATGGGAACCCTCACATGGTTGCTGCTGG...TGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | CTGATTCTATGGTTAAGGTGGTATAATAATGTCCTCTTTACAGAGCAAGACACCTCCGTCTTTGTTAAGTaGCACAAAATACCTGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LILWLRWYNNVLFTEQDTSVFVK*HKIPAA Trigger: GGCCGCAGGTATTTTGTGGCACTTAACAAAGACGGA...GGTGTCTTGCTCTGTAAAGAGGACATTATTATACCACCTTAACCATAGAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR GCA 90 bp | TATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTATCGCACTCCGTCTTTGTTAAGTaGCACAAAATACCTGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YDKKEWLWFDSSIMSLSHSVFVK*HKIPAA Trigger: GGCCGCAGGTATTTTGTGGCACTTAACAAAGACGGA...GTGCGATAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CCA 90 bp | TATTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCAGTGGGAGCCGGCTGCTaGCTCTGCAGAAATATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YFMMGTMTRKNGCGLTLPVGAGC*LCRNIY Trigger: ATAGATATTTCTGCAGAGCCAGCAGCCGGCTCCCAC...TGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGTGTCCTTGTACAATTCTaGAACTCTTTCTGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVFCLGVACFIVHVSPRCVLVQF*NSFWIH Trigger: GTGGATCCAGAAAGAGTTCCAGAATTGTACAAGGAC...ACACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR TCA 90 bp | TATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTATCGCACAAATGTGTAAATTTCTaGTGCCTCTTGGACCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YDKKEWLWFDSSIMSLSHKCVNF*CLLDLA Trigger: CGCCAGGTCCAAGAGGCATCAGAAATTTACACATTT...GTGCGATAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR TCA 90 bp | AAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGTAGAATGGTTGTGGTTTaGCTCTTCCATAATGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KVFCLGVACFIVHVSPRCRMVVV*LFHNVT Trigger: AGTGACATTATGGAAGAGTCAAACCACAACCATTCT...ACACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | TATTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCACCTGGCGCCATCTCTTaGAGTTCCGTCTTTGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFMMGTMTRKNGCGLTLPPGAIS*SSVFVK Trigger: CTTAACAAAGACGGAACTCCAAGAGATGGCGCCAGG...TGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CCA 90 bp | ACCAGCAGCAACCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGAAAAGTGTTCTGTCTTaGTGTGGCATGTTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSNHVRVPIIHSLTDFWKSVLS*CGMFHS Trigger: ACTATGAAACATGCCACACCAAGACAGAACACTTTT...CCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGGTTGCTGCTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | TATTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCAGACTTTGCACTGAAATaGCAGGGAAGCTCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFMMGTMTRKNGCGLTLPDFALK*QGSSHC Trigger: ACAGTGAGAGCTTCCCTGCCATTTCAGTGCAAAGTC...TGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGTTATGACAAGAAAGAATaGTTGTGGTTTGACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVFCLGVACFIVHVSPRCYDKKE*LWFDSS Trigger: GGAAGAGTCAAACCACAACCATTCTTTCTTGTCATA...ACACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR TCA 90 bp | GGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTAGGAAGTAAGTTTCTCTaGTCCATAGAGTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNYDKKEWLWFDSSIMSLGSKFL*SIEFSF Trigger: AAAGGAGAACTCTATGGATCAGAGAAACTTACTTCC...TAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR TCA 90 bp | CTACTGGTAAGGACTAATCCAATGTATCTAAGGGAACTTAATCCACATATAAAGAAATGTGTAAATTTCTaGTGCCTCTTGGACCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLVRTNPMYLRELNPHIKKCVNF*CLLDLA Trigger: CGCCAGGTCCAAGAGGCATCAGAAATTTACACATTT...CTTTATATGTGGATTAAGTTCCCTTAGATACATTGGATTAGTCCTTACCAGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | TATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGGTCCTTGTACAATTCTaGAACTCTTTCTGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YDGNYDKKEWLWFDSSIMVLVQF*NSFWIH Trigger: GTGGATCCAGAAAGAGTTCCAGAATTGTACAAGGAC...CATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR GCA 90 bp | TTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATACAGTTCTCTTCAAACTaGTCCCTAAAGATGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: FYDGNYDKKEWLWFDSSIQFSSN*SLKMHS Trigger: CGAATGCATCTTTAGGGAGCAGTTTGAAGAGAACTG...TATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CCA 90 bp | CTGATTCTATGGTTAAGGTGGTATAATAATGTCCTCTTTACAGAGCAAGACACCAAGAAAGAATGGTTGTaGTTTGACTCTTCCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: LILWLRWYNNVLFTEQDTKKEWL*FDSSIM Trigger: CATTATGGAAGAGTCAAACCACAACCATTCTTTCTT...GGTGTCTTGCTCTGTAAAGAGGACATTATTATACCACCTTAACCATAGAATCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CCA 90 bp | AACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTATCGTATGACAAGAAAGAATaGTTGTGGTTTGACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NYDKKEWLWFDSSIMSLSYDKKE*LWFDSS Trigger: GGAAGAGTCAAACCACAACCATTCTTTCTTGTCATA...CGATAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CCA 90 bp | TATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGAAGAAAGAATGGTTGTaGTTTGACTCTTCCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: YDGNYDKKEWLWFDSSIMKKEWL*FDSSIM Trigger: CATTATGGAAGAGTCAAACCACAACCATTCTTTCTT...CATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS GCA 90 bp | GGCGGCCGCTCCCCGGCAGGAGGCAACAGGAAATGCGAACCCACCTaGTGGCCCAAGCCCTCCAGGCCGCCCAGAAAGCCCCCGACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGRSPAGGNRKCEPT*WPKPSRPPRKPPTS Trigger: CGAAGTCGGGGGCTTTCTGGGCGGCCTGGAGGGCTTGGGCCAGCAGGTGGGTTCGCATTTCCTGTTGCCTCCTGCCGGGGAGCGGCCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS GCA 90 bp | TCGCCCAGCAGCGGCGGCCGCTCCCCGGCAGGAGGCAACAGGAAATaGGAACCCACCTGCTGGCCCAAGCCCTCCAGGCCGCCCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSGGRSPAGGNRK*EPTCWPKPSRPPRK Trigger: CTTTCTGGGCGGCCTGGAGGGCTTGGGCCAGCAGGTGGGTTCGCATTTCCTGTTGCCTCCTGCCGGGGAGCGGCCGCCGCTGCTGGGCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS CCA 90 bp | GGCCGCTCCCCGGCAGGAGGCAACAGGAAATGCGAACCCACCTGCTaGCCCAAGCCCTCCAGGCCGCCCAGAAAGCCCCCGACTTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRSPAGGNRKCEPTC*PKPSRPPRKPPTSA Trigger: AGCCGAAGTCGGGGGCTTTCTGGGCGGCCTGGAGGGCTTGGGCCAGCAGGTGGGTTCGCATTTCCTGTTGCCTCCTGCCGGGGAGCGGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS CCA 90 bp | GGGAAGCTCTCACTGTCTTGGAGCGATCTTCTCTCCTTGGGTAGGTaGGAGCCGGCTGCTGGCTCTGCAGAAATATCTATAGCTGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKLSLSWSDLLSLGR*EPAAGSAEISIAAA Trigger: AGCGGCAGCTATAGATATTTCTGCAGAGCCAGCAGCCGGCTCCCACCTACCCAAGGAGAGAAGATCGCTCCAAGACAGTGAGAGCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS CCA 90 bp | CCGGTTACTCCTCTGAGGTCGCTCCGGAGGGACTTTGCACTGAAATaGCAGGGAAGCTCTCACTGTCTTGGAGCGATCTTCTCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVTPLRSLRRDFALK*QGSSHCLGAIFSPW Trigger: CCAAGGAGAGAAGATCGCTCCAAGACAGTGAGAGCTTCCCTGCCATTTCAGTGCAAAGTCCCTCCGGAGCGACCTCAGAGGAGTAACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS GCA 90 bp | AAGTTAAGGCCCGGTTACTCCTCTGAGGTCGCTCCGGAGGGACTTTaGACTGAAATGGCAGGGAAGCTCTCACTGTCTTGGAGCGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLRPGYSSEVAPEGL*TEMAGKLSLSWSDL Trigger: AAGATCGCTCCAAGACAGTGAGAGCTTCCCTGCCATTTCAGTGCAAAGTCCCTCCGGAGCGACCTCAGAGGAGTAACCGGGCCTTAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CAA 90 bp | ACCAGCAGCAACCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGCTAGGACTAGGGCTGTaGGCTGGGGCTCCAATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSSNHVRVPIIHSLTDFWLGLGL*AGAPIP Trigger: CGGAATTGGAGCCCCAGCCAACAGCCCTAGTCCTAG...CCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGGTTGCTGCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS GCA 90 bp | CCTCTTGGACCTGGCGCCATCTCTTGGAGTTCCGTCTTTGTTAAGTaGCACAAAATACCTGCGGCCAGTGTCTCCATGTTTATATATGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLGPGAISWSSVFVK*HKIPAASVSMFIYV Trigger: AACATATATAAACATGGAGACACTGGCCGCAGGTATTTTGTGGCACTTAACAAAGACGGAACTCCAAGAGATGGCGCCAGGTCCAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS CCA 90 bp | GAAATGTGTAAATTTCTGATGCCTCTTGGACCTGGCGCCATCTCTTaGAGTTCCGTCTTTGTTAAGTGCCACAAAATACCTGCGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EMCKFLMPLGPGAIS*SSVFVKCHKIPAAS Trigger: ACTGGCCGCAGGTATTTTGTGGCACTTAACAAAGACGGAACTCCAAGAGATGGCGCCAGGTCCAAGAGGCATCAGAAATTTACACATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CAA 90 bp | ACCAGCAGCAACCATGTGAGGGTTCCCATTATCCACAGTTTAACAGATTTTTGGCTTGGAGTTCCGTCTTaGTTAAGTGCCACAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: TSSNHVRVPIIHSLTDFWLGVPS*LSATKY Trigger: GTATTTTGTGGCACTTAACAAAGACGGAACTCCAAG...CCAAAAATCTGTTAAACTGTGGATAATGGGAACCCTCACATGGTTGCTGCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CAA 90 bp | TATTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCAGAAGCTCTCACTGTCTaGGAGCGATCTTCTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YFMMGTMTRKNGCGLTLPEALTV*ERSSLL Trigger: AAGGAGAGAAGATCGCTCCAAGACAGTGAGAGCTTC...TGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGTTCTGTCTTGGTGTGGCATGTTTCATAGTTCATGTTTCACCCAGGTGTATGTAGCAATGCTCTaGGCTAAGTCAATCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSVLSWCGMFHSSCFTQVYVAML*AKSIHF Trigger: GAAATGGATTGACTTAGCCAAGAGCATTGCTACATA...CACCTGGGTGAAACATGAACTATGAAACATGCCACACCAAGACAGAACACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CAA 90 bp | ATAACCTGTGAATTCTACAAGGTCCTCAGAATTTATGTAGCAATGCTCTTGGCTGACAAGAAAGAATGGTaGTGGTTTGACTCTTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ITCEFYKVLRIYVAMLLADKKEW*WFDSSI Trigger: TATGGAAGAGTCAAACCACAACCATTCTTTCTTGTC...AGCCAAGAGCATTGCTACATAAATTCTGAGGACCTTGTAGAATTCACAGGTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS-3UTR CAA 90 bp | GGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTAGACAAGAAAGAATGGTaGTGGTTTGACTCTTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GNYDKKEWLWFDSSIMSLDKKEW*WFDSSI Trigger: TATGGAAGAGTCAAACCACAACCATTCTTTCTTGTC...TAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CAA 90 bp | TATTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCACTTGGAGTTCCGTCTTaGTTAAGTGCCACAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: YFMMGTMTRKNGCGLTLPLGVPS*LSATKY Trigger: GTATTTTGTGGCACTTAACAAAGACGGAACTCCAAG...TGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS-3UTR CAA 90 bp | AACTATGACAAGAAAGAATGGTTGTGGTTTGACTCTTCCATAATGTCACTATCGTACATCAGTAGGTCCTaGTACAATTCTGGAACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NYDKKEWLWFDSSIMSLSYISRS*YNSGTL Trigger: AAGAGTTCCAGAATTGTACAAGGACCTACTGATGTA...CGATAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS CCA 72 bp | CCGGCAGGAGGCAACAGGAAATGCGAACCCACCTGCTaGCCCAAGCCCTCCAGGCCGCCCAGAAAGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PAGGNRKCEPTC*PKPSRPPRKPP Trigger: CGGGGGCTTTCTGGGCGGCCTGGAGGGCTTGGGCCAGCAGGTGGGTTCGCATTTCCTGTTGCCTCCTGCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS GCA 72 bp | TCCCCGGCAGGAGGCAACAGGAAATGCGAACCCACCTaGTGGCCCAAGCCCTCCAGGCCGCCCAGAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SPAGGNRKCEPT*WPKPSRPPRKP Trigger: GGGCTTTCTGGGCGGCCTGGAGGGCTTGGGCCAGCAGGTGGGTTCGCATTTCCTGTTGCCTCCTGCCGGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS GCA 72 bp | GTTTCTCCGAAGAGGCTGTGGTCCTGCCGGGTGCCCTaGACGCTGCCGTCGGGCAGGATCTGCAGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSPKRLWSCRVP*TLPSGRICRWK Trigger: CTTCCACCTGCAGATCCTGCCCGACGGCAGCGTGCAGGGCACCCGGCAGGACCACAGCCTCTTCGGAGAAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519941.1 |
||
| CDS GCA 72 bp | AAGATACCGAAGAGGCTGTGGTCCTGCCGGGTGCCCTaGACGCTGCCGTCGGGCAGGATCTGCAGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KIPKRLWSCRVP*TLPSGRICRWK Trigger: CTTCCACCTGCAGATCCTGCCCGACGGCAGCGTGCAGGGCACCCGGCAGGACCACAGCCTCTTCGGTATCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS GCA 72 bp | CCCGGTTACTCCTCTGAGGTCGCTCCGGAGGGACTTTaGACTGAAATGGCAGGGAAGCTCTCACTGTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGYSSEVAPEGL*TEMAGKLSLSW Trigger: CCAAGACAGTGAGAGCTTCCCTGCCATTTCAGTGCAAAGTCCCTCCGGAGCGACCTCAGAGGAGTAACCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS CCA 72 bp | GGAAGCTCTCACTGTCTTGGAGCGATCTTCTCTCCTTaGGTAGGTGGGAGCCGGCTGCTGGCTCTGCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSSHCLGAIFSP*VGGSRLLALQK Trigger: TTTCTGCAGAGCCAGCAGCCGGCTCCCACCTACCCAAGGAGAGAAGATCGCTCCAAGACAGTGAGAGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS CCA 72 bp | CCTCTGAGGTCGCTCCGGAGGGACTTTGCACTGAAATaGCAGGGAAGCTCTCACTGTCTTGGAGCGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLRSLRRDFALK*QGSSHCLGAIF Trigger: GAAGATCGCTCCAAGACAGTGAGAGCTTCCCTGCCATTTCAGTGCAAAGTCCCTCCGGAGCGACCTCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS CAA 90 bp | GAAATGGCAGGGAAGCTCTCACTGTCTTGGAGCGATCTTCTCTCCTaGGGTAGGTGGGAGCCGGCTGCTGGCTCTGCAGAAATATCTATA | + |
|
Preference number: 6 (lower is better) Translates to: EMAGKLSLSWSDLLS*GRWEPAAGSAEISI Trigger: TATAGATATTTCTGCAGAGCCAGCAGCCGGCTCCCACCTACCCAAGGAGAGAAGATCGCTCCAAGACAGTGAGAGCTTCCCTGCCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS CCA 72 bp | TCACTGTCTTGGAGCGATCTTCTCTCCTTGGGTAGGTaGGAGCCGGCTGCTGGCTCTGCAGAAATATCTATA | + |
|
Preference number: 6 (lower is better) Translates to: SLSWSDLLSLGR*EPAAGSAEISI Trigger: TATAGATATTTCTGCAGAGCCAGCAGCCGGCTCCCACCTACCCAAGGAGAGAAGATCGCTCCAAGACAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180166.6 |
||
| CDS CAA 72 bp | CTCTTGGACCTGGCGCCATCTCTTGGAGTTCCGTCTTaGTTAAGTGCCACAAAATACCTGCGGCCAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLDLAPSLGVPS*LSATKYLRPVS Trigger: AGACACTGGCCGCAGGTATTTTGTGGCACTTAACAAAGACGGAACTCCAAGAGATGGCGCCAGGTCCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS GCA 72 bp | CCTGGCGCCATCTCTTGGAGTTCCGTCTTTGTTAAGTaGCACAAAATACCTGCGGCCAGTGTCTCCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PGAISWSSVFVK*HKIPAASVSMF Trigger: AAACATGGAGACACTGGCCGCAGGTATTTTGTGGCACTTAACAAAGACGGAACTCCAAGAGATGGCGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS CCA 72 bp | AAATTTCTGATGCCTCTTGGACCTGGCGCCATCTCTTaGAGTTCCGTCTTTGTTAAGTGCCACAAAATACCT | + |
|
Preference number: 6 (lower is better) Translates to: KFLMPLGPGAIS*SSVFVKCHKIP Trigger: AGGTATTTTGTGGCACTTAACAAAGACGGAACTCCAAGAGATGGCGCCAGGTCCAAGAGGCATCAGAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS CAA 72 bp | GTCACTATCGCACTTCAAGTGTACATCAGTAGGTCCTaGTACAATTCTGGAACTCTTTCTGGATCCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VTIALQVYISRS*YNSGTLSGSTG Trigger: ACCAGTGGATCCAGAAAGAGTTCCAGAATTGTACAAGGACCTACTGATGTACACTTGAAGTGCGATAGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||
| CDS CCA 72 bp | TTTTATGATGGGAACTATGACAAGAAAGAATGGTTGTaGTTTGACTCTTCCATAATGTCACTATCGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: FYDGNYDKKEWL*FDSSIMSLSHF Trigger: GAAGTGCGATAGTGACATTATGGAAGAGTCAAACCACAACCATTCTTTCTTGTCATAGTTCCCATCATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180166.6 ENST00000519941.1 |
||