RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000138685

Ensembl transcript IDs: ENST00000264498.8, ENST00000608478.1, ENST00000644866.2

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCAGAGAACTATAAAGCAGCTGAGCCTTATCAGAGATCATCAGTaGACTAGAGTCAGAGGGAAACACCAGGAAAACCCACATTCTGCA +
Preference number: 1 (lower is better)
Translates to: SQRTIKQLSLIRDHQ*TRVRGKHQENPHSA
Trigger: TGCAGAATGTGGGTTTTCCTGGTGTTTCCCTCTGACTCTAGTGCACTGATGATCTCTGATAAGGCTCAGCTGCTTTATAGTTCTCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR CCA 90 bp GTCCGTCCTGAGTATTCGGCAACAGCACACAAATCCTGGAGCTTTTaGGAAGTCAGATATGTATATCATCTGCCGCCTAAAGCCATATTC +
Preference number: 1 (lower is better)
Translates to: VRPEYSATAHKSWSF*EVRYVYHLPPKAIF
Trigger: GAATATGGCTTTAGGCGGCAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGCCGAATACTCAGGACGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR GCA 90 bp GTGCCACGTGAGAGCAGAGCATGTGAGCTAATTAAGCTTATGTTTTaGAGCCTTACCCAATCTATATTGGGCAAAAAGCAGTCTGCAGGT +
Preference number: 1 (lower is better)
Translates to: VPRESRACELIKLMF*SLTQSILGKKQSAG
Trigger: ACCTGCAGACTGCTTTTTGCCCAATATAGATTGGGTAAGGCTGCAAAACATAAGCTTAATTAGCTCACATGCTCTGCTCTCACGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR CCA 90 bp AGAATTCAGGTCCGTCCTGAGTATTCGGCAACAGCACACAAATCCTaGAGCTTTTGGGAAGTCAGATATGTATATCATCTGCCGCCTAAA +
Preference number: 1 (lower is better)
Translates to: RIQVRPEYSATAHKS*SFWEVRYVYHLPPK
Trigger: TTTAGGCGGCAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGCCGAATACTCAGGACGGACCTGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR TCA 90 bp GGCTGCTGCTGTATGGGTACAGAGAAGGGTTTGACAAAATTGACCTaGCTGTGGAAGAACTTCCAGCAGTTTACACAGGACTGTTTTATA +
Preference number: 1 (lower is better)
Translates to: GCCCMGTEKGLTKLT*LWKNFQQFTQDCFI
Trigger: TATAAAACAGTCCTGTGTAAACTGCTGGAAGTTCTTCCACAGTCAGGTCAATTTTGTCAAACCCTTCTCTGTACCCATACAGCAGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR CCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTaGAAGGGTCTCCCGCATACTCTGGAGACAAAAGCACTTATTTGC +
Preference number: 1 (lower is better)
Translates to: SIHLEILGEEISILR*KGLPHTLETKALIC
Trigger: GCAAATAAGTGCTTTTGTCTCCAGAGTATGCGGGAGACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR GCA 90 bp CGCCTAAAGCCATATTCATTCACCATAAATTTTTGCCAGGAAGAATaGTTAAGATGTGAGTGGATGGATCTCAATGACCTGGCGAAGACT +
Preference number: 1 (lower is better)
Translates to: RLKPYSFTINFCQEE*LRCEWMDLNDLAKT
Trigger: AGTCTTCGCCAGGTCATTGAGATCCATCCACTCACATCTTAAGCATTCTTCCTGGCAAAAATTTATGGTGAATGAATATGGCTTTAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR CCA 90 bp ATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGCACATaGGAATTGAGACATGTTTCTGTGACTTCCTCTTCTTTGCATGTT +
Preference number: 1 (lower is better)
Translates to: MGKTVYGKTVYSHST*ELRHVSVTSSSLHV
Trigger: AACATGCAAAGAAGAGGAAGTCACAGAAACATGTCTCAATTCCCATGTGCTGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR GCA 90 bp CACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTaGCGCCTAAAGCCATATTCATTCACCATAAATTTTTGCCAGGAA +
Preference number: 1 (lower is better)
Translates to: HTNPGAFGKSDMYII*RLKPYSFTINFCQE
Trigger: TTCCTGGCAAAAATTTATGGTGAATGAATATGGCTTTAGGCGGCAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR TCA 90 bp CCAAGTTTCTTGAAAACTGATCAAACACCTCCAGCATTTCGGTGTTaGAGAAATGAATCTAAGTTCTTTGGAATCTTATCTCAAGAAACA +
Preference number: 1 (lower is better)
Translates to: PSFLKTDQTPPAFRC*RNESKFFGILSQET
Trigger: TGTTTCTTGAGATAAGATTCCAAAGAACTTAGATTCATTTCTTCAACACCGAAATGCTGGAGGTGTTTGATCAGTTTTCAAGAAACTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATATCACCAGGTTGGTCTTaGACTCCTGGGCTCAAGCGA +
Preference number: 2 (lower is better)
Translates to: LLSRADLLTTPIQCFHDISPGWS*TPGLKR
Trigger: TCGCTTGAGCCCAGGAGTTCAAGACCAACCTGGTGA...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAAGCCTCCCAAGTATCTaGGACCACATGTACACGCCA +
Preference number: 2 (lower is better)
Translates to: LLSRADLLTTPIQCFHDISLPSI*DHMYTP
Trigger: TGGCGTGTACATGTGGTCTCAGATACTTGGGAGGCT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAAATTCAGGTCCGTCCTaGGTATTCGGCAACAGCACA +
Preference number: 2 (lower is better)
Translates to: LLSRADLLTTPIQCFHDINSGPS*VFGNST
Trigger: TGTGCTGTTGCCGAATACTCAGGACGGACCTGAATT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGAGTTGCTAGGCTGCTaGTGTATGGGTACAGAGAAG +
Preference number: 2 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIELLGC*CMGTEK
Trigger: CTTCTCTGTACCCATACAGCAGCAGCCTAGCAACTC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATATTGACAAAATTGACCTaGCTGTGGAAGAACTTCCAG +
Preference number: 2 (lower is better)
Translates to: LLSRADLLTTPIQCFHDILTKLT*LWKNFQ
Trigger: CTGGAAGTTCTTCCACAGTCAGGTCAATTTTGTCAA...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGCAGAGTTGCTAGGCTaGTGCTGTATGGGTACAGAG +
Preference number: 2 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTAELLG*CCMGTE
Trigger: CTCTGTACCCATACAGCAGCAGCCTAGCAACTCTGC...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATATGGATCTCAATGACCTaGCGAAGACTGAAAATACAA +
Preference number: 2 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIWISMT*RRLKIQ
Trigger: TTGTATTTTCAGTCTTCGCCAGGTCATTGAGATCCA...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGGTTCGAGAAGTTTTTaGAGAGACTGGTATAAAATC +
Preference number: 2 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIGSRSF*RDWYKI
Trigger: GATTTTATACCAGTCTCTTCAAAAACTTCTCGAACC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGAGTTGCTAGGCTGCTaGTGTATGGGTACAGAGAAG +
Preference number: 2 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTELLGC*CMGTEK
Trigger: CTTCTCTGTACCCATACAGCAGCAGCCTAGCAACTC...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTAATTCAGGTCCGTCCTaGGTATTCGGCAACAGCACA +
Preference number: 2 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLNSGPS*VFGNST
Trigger: TGTGCTGTTGCCGAATACTCAGGACGGACCTGAATT...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGGAGTTGCTAGGCTGCTaGTGTATGGGTACAGAGAAG +
Preference number: 2 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWELLGC*CMGTEK
Trigger: CTTCTCTGTACCCATACAGCAGCAGCCTAGCAACTC...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGACGATTATGGCTCACTaGAACCTTGACCTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWTIMAH*NLDLSA
Trigger: GGCTGAGAGGTCAAGGTTGCAGTGAGCCATAATCGT...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTACGATTATGGCTCACTaGAACCTTGACCTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: SIHLEILGEEISILRWKGTIMAH*NLDLSA
Trigger: GGCTGAGAGGTCAAGGTTGCAGTGAGCCATAATCGT...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACATGCTTAAGATGTGAGTaGATGGATCTCAATGACCTG +
Preference number: 2 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTCLRCE*MDLNDL
Trigger: CAGGTCATTGAGATCCATCCACTCACATCTTAAGCA...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACCAGCATTTCGGTGTTaGAGAAATGAATCTAAGTTC +
Preference number: 2 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTPAFRC*RNESKF
Trigger: GAACTTAGATTCATTTCTTCAACACCGAAATGCTGG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACATTTTGCCAGGAAGAATaGTTAAGATGTGAGTGGATG +
Preference number: 2 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTFCQEE*LRCEWM
Trigger: CATCCACTCACATCTTAAGCATTCTTCCTGGCAAAA...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTACTACCCCCATCCAGTaGTTCCACGACATAGAAACA +
Preference number: 2 (lower is better)
Translates to: SIHLEILGEEISILRWKGTTPIQ*FHDIET
Trigger: TGTTTCTATGTCGTGGAAGCACTGGATGGGGGTAGT...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTGTTAGAGGGACCATCTaGATGTGTAGAAAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLVRGTI*MCRKSS
Trigger: GCTGCTTTTTCTACACATCCAGATGGTCCCTCTAAC...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGAGCATATCCAGGGGATaGGTAAGACAGTCTATGGTA +
Preference number: 2 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWSISRG*VRQSMV
Trigger: TACCATAGACTGTCTTACCCATCCCCTGGATATGCT...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTTGACAAAATTGACCTaGCTGTGGAAGAACTTCCAG +
Preference number: 2 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLLTKLT*LWKNFQ
Trigger: CTGGAAGTTCTTCCACAGTCAGGTCAATTTTGTCAA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTTTGACAAAATTGACCTaGCTGTGGAAGAACTTCCAG +
Preference number: 2 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLLTKLT*LWKNFQ
Trigger: CTGGAAGTTCTTCCACAGTCAGGTCAATTTTGTCAA...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGGTTCGAGAAGTTTTTaGAGAGACTGGTATAAAATC +
Preference number: 2 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTGSRSF*RDWYKI
Trigger: GATTTTATACCAGTCTCTTCAAAAACTTCTCGAACC...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCGCAGAGTTGCTAGGCTaGTGCTGTATGGGTACAGAG +
Preference number: 2 (lower is better)
Translates to: HISKPNIYNFRPKYTPESAELLG*CCMGTE
Trigger: CTCTGTACCCATACAGCAGCAGCCTAGCAACTCTGC...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR-3UTR CCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTGCTTAAGATGTGAGTaGATGGATCTCAATGACCTG +
Preference number: 2 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLCLRCE*MDLNDL
Trigger: CAGGTCATTGAGATCCATCCACTCACATCTTAAGCA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCCTCTGTTGCCTAGGCTaGACTGCAGTGGCACGATTA +
Preference number: 2 (lower is better)
Translates to: HISKPNIYNFRPKYTPESLCCLG*TAVARL
Trigger: TAATCGTGCCACTGCAGTCCAGCCTAGGCAACAGAG...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR CAA 90 bp AAGACAGTCTATGGTAAGACAGTCTACAGTCACAGCACATGGGAATaGAGACATGTTTCTGTGACTTCCTCTTCTTTGCATGTTTTTCAC +
Preference number: 2 (lower is better)
Translates to: KTVYGKTVYSHSTWE*RHVSVTSSSLHVFH
Trigger: GTGAAAAACATGCAAAGAAGAGGAAGTCACAGAAACATGTCTCAATTCCCATGTGCTGTGACTGTAGACTGTCTTACCATAGACTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGCCAGCATTTCGGTGTTaGAGAAATGAATCTAAGTTC +
Preference number: 2 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWPAFRC*RNESKF
Trigger: GAACTTAGATTCATTTCTTCAACACCGAAATGCTGG...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTACATGCCGAACTTTTaGTTAGTGGTACTAAGAGCT +
Preference number: 2 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWYMPNF*LVVLRA
Trigger: AGCTCTTAGTACCACTAATCAAAAGTTCGGCATGTA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTTTTGCCAGGAAGAATaGTTAAGATGTGAGTGGATG +
Preference number: 2 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLFCQEE*LRCEWM
Trigger: CATCCACTCACATCTTAAGCATTCTTCCTGGCAAAA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTTTTGCCAGGAAGAATaGTTAAGATGTGAGTGGATG +
Preference number: 2 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWFCQEE*LRCEWM
Trigger: CATCCACTCACATCTTAAGCATTCTTCCTGGCAAAA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTTGGATCTCAATGACCTaGCGAAGACTGAAAATACAA +
Preference number: 2 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLWISMT*RRLKIQ
Trigger: TTGTATTTTCAGTCTTCGCCAGGTCATTGAGATCCA...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTGGATCTCAATGACCTaGCGAAGACTGAAAATACAA +
Preference number: 2 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWWISMT*RRLKIQ
Trigger: TTGTATTTTCAGTCTTCGCCAGGTCATTGAGATCCA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGGATATGTATATCATCTaGCGCCTAAAGCCATATTCA +
Preference number: 2 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWDMYII*RLKPYS
Trigger: TGAATATGGCTTTAGGCGGCAGATGATATACATATC...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR GCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGATATGTATATCATCTaGCGCCTAAAGCCATATTCA +
Preference number: 2 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSDMYII*RLKPYS
Trigger: TGAATATGGCTTTAGGCGGCAGATGATATACATATC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTTACAGTCACAGCACATaGGAATTGAGACATGTTTCT +
Preference number: 2 (lower is better)
Translates to: SIHLEILGEEISILRWKGYSHST*ELRHVS
Trigger: AGAAACATGTCTCAATTCCCATGTGCTGTGACTGTA...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCGTTAGAGGGACCATCTaGATGTGTAGAAAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: HISKPNIYNFRPKYTPESVRGTI*MCRKSS
Trigger: GCTGCTTTTTCTACACATCCAGATGGTCCCTCTAAC...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR CAA 90 bp AAACACCTCCAGCATTTCGGTGTTGAAGAAATGAATCTAAGTTCTTaGGAATCTTATCTCAAGAAACAAAGGAACTGCAGCCATGCAAAA +
Preference number: 2 (lower is better)
Translates to: KHLQHFGVEEMNLSS*ESYLKKQRNCSHAK
Trigger: TTTTGCATGGCTGCAGTTCCTTTGTTTCTTGAGATAAGATTCCAAAGAACTTAGATTCATTTCTTCAACACCGAAATGCTGGAGGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR TCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCAAACAGCATAGATCATaGGCTACATGCCGAACTTTT +
Preference number: 2 (lower is better)
Translates to: HISKPNIYNFRPKYTPESKQHRS*ATCRTF
Trigger: AAAAGTTCGGCATGTAGCTCATGATCTATGCTGTTT...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR-3UTR TCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCGGTTCGAGAAGTTTTTaGAGAGACTGGTATAAAATC +
Preference number: 2 (lower is better)
Translates to: HISKPNIYNFRPKYTPESGSRSF*RDWYKI
Trigger: GATTTTATACCAGTCTCTTCAAAAACTTCTCGAACC...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR-3UTR GCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCGATATGTATATCATCTaGCGCCTAAAGCCATATTCA +
Preference number: 2 (lower is better)
Translates to: HISKPNIYNFRPKYTPESDMYII*RLKPYS
Trigger: TGAATATGGCTTTAGGCGGCAGATGATATACATATC...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR-3UTR CAA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACCATCACCAGCAGAGTaGCTAGGCTGCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTPSPAE*LGCCCM
Trigger: CATACAGCAGCAGCCTAGCAACTCTGCTGGTGATGG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CAA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCCCATCACCAGCAGAGTaGCTAGGCTGCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSPSPAE*LGCCCM
Trigger: CATACAGCAGCAGCCTAGCAACTCTGCTGGTGATGG...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CAA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTCCATCACCAGCAGAGTaGCTAGGCTGCTGCTGTATG +
Preference number: 3 (lower is better)
Translates to: SIHLEILGEEISILRWKGPSPAE*LGCCCM
Trigger: CATACAGCAGCAGCCTAGCAACTCTGCTGGTGATGG...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR GCA 72 bp CCCAATCTATATTGGGCAAAAAGCAGTCTGCAGGTTTaGAAGGCTTCCTCTCTCCTGCATCTTGCCTTTTCA +
Preference number: 3 (lower is better)
Translates to: PNLYWAKSSLQV*KASSLLHLAFS
Trigger: TGAAAAGGCAAGATGCAGGAGAGAGGAAGCCTTGCAAACCTGCAGACTGCTTTTTGCCCAATATAGATTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR GCA 72 bp AAAATACAACTCCCATCACCAGCAGAGTTGCTAGGCTaGTGCTGTATGGGTACAGAGAAGGGTTTGACAAAA +
Preference number: 3 (lower is better)
Translates to: KIQLPSPAELLG*CCMGTEKGLTK
Trigger: TTTTGTCAAACCCTTCTCTGTACCCATACAGCAGCAGCCTAGCAACTCTGCTGGTGATGGGAGTTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR GCA 72 bp ACTATAAAGCAGCTGAGCCTTATCAGAGATCATCAGTaGACTAGAGTCAGAGGGAAACACCAGGAAAACCCA +
Preference number: 3 (lower is better)
Translates to: TIKQLSLIRDHQ*TRVRGKHQENP
Trigger: TGGGTTTTCCTGGTGTTTCCCTCTGACTCTAGTGCACTGATGATCTCTGATAAGGCTCAGCTGCTTTATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR CCA 72 bp GTCCGTCCTGAGTATTCGGCAACAGCACACAAATCCTaGAGCTTTTGGGAAGTCAGATATGTATATCATCTG +
Preference number: 3 (lower is better)
Translates to: VRPEYSATAHKS*SFWEVRYVYHL
Trigger: CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGCCGAATACTCAGGACGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR CCA 72 bp GAGTATTCGGCAACAGCACACAAATCCTGGAGCTTTTaGGAAGTCAGATATGTATATCATCTGCCGCCTAAA +
Preference number: 3 (lower is better)
Translates to: EYSATAHKSWSF*EVRYVYHLPPK
Trigger: TTTAGGCGGCAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGCCGAATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CAA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACTTCTCCTAAATACTTaGGGAGACAATGACAGAACA +
Preference number: 3 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTLLLNT*GDNDRT
Trigger: TGTTCTGTCATTGTCTCCCAAAGTATTTAGGAGAAG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR CCA 72 bp ACAGTCTATGGTAAGACAGTCTACAGTCACAGCACATaGGAATTGAGACATGTTTCTGTGACTTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: TVYGKTVYSHST*ELRHVSVTSSS
Trigger: AGAAGAGGAAGTCACAGAAACATGTCTCAATTCCCATGTGCTGTGACTGTAGACTGTCTTACCATAGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CAA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTCACAGCACATGGGAATaGAGACATGTTTCTGTGACT +
Preference number: 3 (lower is better)
Translates to: SIHLEILGEEISILRWKGHSTWE*RHVSVT
Trigger: AGTCACAGAAACATGTCTCAATTCCCATGTGCTGTG...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR GCA 72 bp GGTCTCCCGCATACTCTGGAGACAAAAGCACTTATTTaGCCATTCAATTTTCAGTCAGTTAGTGATTCAAGT +
Preference number: 3 (lower is better)
Translates to: GLPHTLETKALI*PFNFQSVSDSS
Trigger: ACTTGAATCACTAACTGACTGAAAATTGAATGGGCAAATAAGTGCTTTTGTCTCCAGAGTATGCGGGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR GCA 72 bp GAGAGCAGAGCATGTGAGCTAATTAAGCTTATGTTTTaGAGCCTTACCCAATCTATATTGGGCAAAAAGCAG +
Preference number: 3 (lower is better)
Translates to: ESRACELIKLMF*SLTQSILGKKQ
Trigger: CTGCTTTTTGCCCAATATAGATTGGGTAAGGCTGCAAAACATAAGCTTAATTAGCTCACATGCTCTGCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR-3UTR CAA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTCAAATCCTGGAGCTTTaGGGAAGTCAGATATGTATA +
Preference number: 3 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLQILEL*GSQICI
Trigger: TATACATATCTGACTTCCCAAAAGCTCCAGGATTTG...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CAA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCCAAATCCTGGAGCTTTaGGGAAGTCAGATATGTATA +
Preference number: 3 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSQILEL*GSQICI
Trigger: TATACATATCTGACTTCCCAAAAGCTCCAGGATTTG...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CAA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGCTTCTCCTAAATACTTaGGGAGACAATGACAGAACA +
Preference number: 3 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWLLLNT*GDNDRT
Trigger: TGTTCTGTCATTGTCTCCCAAAGTATTTAGGAGAAG...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CAA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCGAAGAAATATCCATCTaGAGGTGGAAGGGTCTCCCG +
Preference number: 3 (lower is better)
Translates to: HISKPNIYNFRPKYTPESEEISI*RWKGLP
Trigger: CGGGAGACCCTTCCACCTCAAGATGGATATTTCTTC...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR GCA 72 bp CCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTaGCGCCTAAAGCCATATTCATTCACCATAAATTTT +
Preference number: 3 (lower is better)
Translates to: PGAFGKSDMYII*RLKPYSFTINF
Trigger: AAAATTTATGGTGAATGAATATGGCTTTAGGCGGCAGATGATATACATATCTGACTTCCCAAAAGCTCCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR-3UTR CAA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCAAAAAGTGCTTGTGGTaGTCACAACAACTCACCTAC +
Preference number: 3 (lower is better)
Translates to: HISKPNIYNFRPKYTPESKKCLW*SQQLTY
Trigger: GTAGGTGAGTTGTTGTGACAACCACAAGCACTTTTT...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR-3UTR CAA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCTTCATCTTGAAATCCTaGGGGAAGAAATATCCATCT +
Preference number: 3 (lower is better)
Translates to: HISKPNIYNFRPKYTPESFILKS*GKKYPS
Trigger: AGATGGATATTTCTTCCCCAAGGATTTCAAGATGAA...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR TCA 72 bp TTGAAAACTGATCAAACACCTCCAGCATTTCGGTGTTaGAGAAATGAATCTAAGTTCTTTGGAATCTTATCT +
Preference number: 3 (lower is better)
Translates to: LKTDQTPPAFRC*RNESKFFGILS
Trigger: AGATAAGATTCCAAAGAACTTAGATTCATTTCTTCAACACCGAAATGCTGGAGGTGTTTGATCAGTTTTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATACGCCCGGGATCCCGTTaGAACCGCGGGCACCGCGTC +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIRPGSR*NRGHRV
Trigger: GACGCGGTGCCCGCGGTTGCAACGGGATCCCGGGCG...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGCGGGAAGGCGCCGCTaGCGCCATCCTCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIAGRRR*RHPRAR
Trigger: CCTTGCCCGAGGATGGCGGCAGCGGCGCCTTCCCGC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATATCCGCGGACGCCGCCTaGGGAGAGCCGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDISADAA*GEPPPK
Trigger: CTTGGGAGGCGGCTCTCCCCAGGCGGCGTCCGCGGA...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAAGGCGGGCAGCGTGGTaGTGCTCCCGGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIRRAAW*CSRLPW
Trigger: CCATGGCAGCCGGGAGCATCACCACGCTGCCCGCCT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGCCGCTTGGGGTCCTTaGAGTGGCCGGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIAAWGP*SGRAGR
Trigger: CCTTCCCGCCCGGCCACTTCAAGGACCCCAAGCGGC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATATTGGGGTCCTTGAAGTaGCCGGGCGGGAAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDILGSLK*PGGKAP
Trigger: CGGCGCCTTCCCGCCCGGCCACTTCAAGGACCCCAA...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAACTCGGCCGTCGGGGTaGATGCGCAGGAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDITRPSG*MRRKKP
Trigger: GGGCTTCTTCCTGCGCATCCACCCCGACGGCCGAGT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACGCCCGGGATCCCGTTaGAACCGCGGGCACCGCGTC +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTRPGSR*NRGHRV
Trigger: GACGCGGTGCCCGCGGTTGCAACGGGATCCCGGGCG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGGTGATGCTCCCGGCTaGCATGGTCCCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTGDAPG*HGPCGA
Trigger: GGCCCCGCAGGGACCATGGCAGCCGGGAGCATCACC...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGCGCCCGGGATCCCGTTaGAACCGCGGGCACCGCGTC +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLRPGSR*NRGHRV
Trigger: GACGCGGTGCCCGCGGTTGCAACGGGATCCCGGGCG...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGCGGGAAGGCGCCGCTaGCGCCATCCTCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSAGRRR*RHPRAR
Trigger: CCTTGCCCGAGGATGGCGGCAGCGGCGCCTTCCCGC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTGCGGGAAGGCGCCGCTaGCGCCATCCTCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLAGRRR*RHPRAR
Trigger: CCTTGCCCGAGGATGGCGGCAGCGGCGCCTTCCCGC...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTCCGCGGACGCCGCCTaGGGAGAGCCGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWSADAA*GEPPPK
Trigger: CTTGGGAGGCGGCTCTCCCCAGGCGGCGTCCGCGGA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTCCGCGGACGCCGCCTaGGGAGAGCCGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLSADAA*GEPPPK
Trigger: CTTGGGAGGCGGCTCTCCCCAGGCGGCGTCCGCGGA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACCTGGGGTTCACGGATaGGTGTCTCCGCGGACGCCG +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTPGVHG*VSPRTP
Trigger: CGGCGTCCGCGGAGACACCCATCCGTGAACCCCAGG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACATTGGGGTCCTTGAAGTaGCCGGGCGGGAAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTLGSLK*PGGKAP
Trigger: CGGCGCCTTCCCGCCCGGCCACTTCAAGGACCCCAA...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGAGGCGGGCAGCGTGGTaGTGCTCCCGGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWRRAAW*CSRLPW
Trigger: CCATGGCAGCCGGGAGCATCACCACGCTGCCCGCCT...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTGCCGCTTGGGGTCCTTaGAGTGGCCGGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLAAWGP*SGRAGR
Trigger: CCTTCCCGCCCGGCCACTTCAAGGACCCCAAGCGGC...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGCCGCTTGGGGTCCTTaGAGTGGCCGGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSAAWGP*SGRAGR
Trigger: CCTTCCCGCCCGGCCACTTCAAGGACCCCAAGCGGC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGGTGATGCTCCCGGCTaGCATGGTCCCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSGDAPG*HGPCGA
Trigger: GGCCCCGCAGGGACCATGGCAGCCGGGAGCATCACC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGGGTGATGCTCCCGGCTaGCATGGTCCCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWGDAPG*HGPCGA
Trigger: GGCCCCGCAGGGACCATGGCAGCCGGGAGCATCACC...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGCAGAGTTGCTAGGCTaGTGCTGTATGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIAELLG*CCMGTE
Trigger: CTCTGTACCCATACAGCAGCAGCCTAGCAACTCTGC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGCGGCGGCCCGGGACCTaGGGTTCACGGATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLRRPGT*GSRMGV
Trigger: GACACCCATCCGTGAACCCCAGGTCCCGGGCCGCCG...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTCGGCGGCCCGGGACCTaGGGTTCACGGATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLRRPGT*GSRMGV
Trigger: GACACCCATCCGTGAACCCCAGGTCCCGGGCCGCCG...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAACTCGGCCGTCGGGGTaGATGCGCAGGAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTTRPSG*MRRKKP
Trigger: GGGCTTCTTCCTGCGCATCCACCCCGACGGCCGAGT...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCAGTTCTCCTCCCTCCTaGGCGCCGCCCCCTACTCGC +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSSSPPS*APPPTR
Trigger: GCGAGTAGGGGGCGGCGCGCAGGAGGGAGGAGAACT...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264498.8
CDS-3UTR GCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTAGCCGCCTCCCAAGCTaGAGCGCCCGGGATCCCGTT +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLSRLPS*SARDPV
Trigger: AACGGGATCCCGGGCGCTGCAGCTTGGGAGGCGGCT...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGGGCCGTCGGGGTGGATaGGCAGGAAGAAGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLGRRGG*AGRSPR
Trigger: ACGGGGGCTTCTTCCTGCGCATCCACCCCGACGGCC...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGGGCCGTCGGGGTGGATaGGCAGGAAGAAGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWGRRGG*AGRSPR
Trigger: ACGGGGGCTTCTTCCTGCGCATCCACCCCGACGGCC...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAACGATTATGGCTCACTaGAACCTTGACCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDITIMAH*NLDLSA
Trigger: GGCTGAGAGGTCAAGGTTGCAGTGAGCCATAATCGT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTCGGCGGCCCGGGACCTaGGGTTCACGGATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGRRPGT*GSRMGV
Trigger: GACACCCATCCGTGAACCCCAGGTCCCGGGCCGCCG...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTTGGGGTCCTTGAAGTaGCCGGGCGGGAAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLLGSLK*PGGKAP
Trigger: CGGCGCCTTCCCGCCCGGCCACTTCAAGGACCCCAA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATACTACTCAGGCAGTGCTaGTTTTCAGTCAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDILLRQC*FSVSCY
Trigger: ATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAG...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATACCCAGTTCGTTTCAGTaGCACATACCAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIPSSFQ*HIPTGV
Trigger: TACACCAGTTGGTATGTGGCACTGAAACGAACTGGG...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAACTACCCCCATCCAGTaGTTCCACGACATAGAAACA +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDITTPIQ*FHDIET
Trigger: TGTTTCTATGTCGTGGAAGCACTGGATGGGGGTAGT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGGCAGGAAGAGTATCTaGTGCATTAGCCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIGRKSI*CISQRT
Trigger: AGTTCTCTGGCTAATGCAGCAGATACTCTTCCTGCC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTCCTGGGGTTCACGGATaGGTGTCTCCGCGGACGCCG +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGPGVHG*VSPRTP
Trigger: CGGCGTCCGCGGAGACACCCATCCGTGAACCCCAGG...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGTGCCACATACCAACTaGTGTATTTCCTTGACCGGT +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIVPHTN*CISLTG
Trigger: ACCGGTCAAGGAAATACACCAGTTGGTATGTGGCAC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGCCCAGGTCCTGTTTTaGATCCAAGTTTATACTGCC +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIAQVLF*IQVYTA
Trigger: GGCAGTATAAACTTGGATCCAAAACAGGACCTGGGC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAATATCCATCTTGAGGTaGAAGGGTCTCCCGCATACT +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIISILR*KGLPHT
Trigger: AGTATGCGGGAGACCCTTCCACCTCAAGATGGATAT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTACTCGGCCGTCGGGGTaGATGCGCAGGAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGTRPSG*MRRKKP
Trigger: GGGCTTCTTCCTGCGCATCCACCCCGACGGCCGAGT...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAAGCATATCCAGGGGATaGGTAAGACAGTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDISISRG*VRQSMV
Trigger: TACCATAGACTGTCTTACCCATCCCCTGGATATGCT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAAGGCTTCCTCTCTCCTaGATCTTGCCTTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIRLPLS*ILPFQI
Trigger: TATTTGAAAAGGCAAGATGCAGGAGAGAGGAAGCCT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAAGCCTCCCAAGTATCTaGGACCACATGTACACGCCA +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTSLPSI*DHMYTP
Trigger: TGGCGTGTACATGTGGTCTCAGATACTTGGGAGGCT...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAAAACAGCATAGATCATaGGCTACATGCCGAACTTTT +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIKQHRS*ATCRTF
Trigger: AAAAGTTCGGCATGTAGCTCATGATCTATGCTGTTT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAAAAAGTATAGCTTTCTaGCCAGGTCCTGTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIKSIAF*PGPVLD
Trigger: ATCCAAAACAGGACCTGGGCAGAAAGCTATACTTTT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAAGCAGTCTGCAGGTTTaGAAGGCTTCCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTSSLQV*KASSLL
Trigger: CAGGAGAGAGGAAGCCTTGCAAACCTGCAGACTGCT...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACACACTATCCACTGGTaGCACGTGAGAGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTHTIHW*HVRAEH
Trigger: ATGCTCTGCTCTCACGTGGCACCAGTGGATAGTGTG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACTCTGTTGCCTAGGCTaGACTGCAGTGGCACGATTA +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTLCCLG*TAVARL
Trigger: TAATCGTGCCACTGCAGTCCAGCCTAGGCAACAGAG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACATCTCACACTATCCACTaGTGCCACGTGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTSHTIH*CHVRAE
Trigger: CTCTGCTCTCACGTGGCACCAGTGGATAGTGTGAGA...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCTCACCAGGTTGGTCTTaGACTCCTGGGCTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSSPGWS*TPGLKR
Trigger: TCGCTTGAGCCCAGGAGTTCAAGACCAACCTGGTGA...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTCACCAGGTTGGTCTTaGACTCCTGGGCTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLSPGWS*TPGLKR
Trigger: TCGCTTGAGCCCAGGAGTTCAAGACCAACCTGGTGA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGATATGTATATCATCTaGCGCCTAAAGCCATATTCA +
Preference number: 4 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIDMYII*RLKPYS
Trigger: TGAATATGGCTTTAGGCGGCAGATGATATACATATC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGGGCAAAAAGCAGTCTaGAGGTTTGCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTGQKAV*RFARLP
Trigger: AGGAAGCCTTGCAAACCTGCAGACTGCTTTTTGCCC...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGAGCCTCCCAAGTATCTaGGACCACATGTACACGCCA +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLSLPSI*DHMYTP
Trigger: TGGCGTGTACATGTGGTCTCAGATACTTGGGAGGCT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGAGCCTCCCAAGTATCTaGGACCACATGTACACGCCA +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWSLPSI*DHMYTP
Trigger: TGGCGTGTACATGTGGTCTCAGATACTTGGGAGGCT...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACTACTCAGGCAGTGCTaGTTTTCAGTCAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTLLRQC*FSVSCY
Trigger: ATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACCCAGTTCGTTTCAGTaGCACATACCAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTPSSFQ*HIPTGV
Trigger: TACACCAGTTGGTATGTGGCACTGAAACGAACTGGG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGGCAGAGTTGCTAGGCTaGTGCTGTATGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLAELLG*CCMGTE
Trigger: CTCTGTACCCATACAGCAGCAGCCTAGCAACTCTGC...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGAGCAGTCTGCAGGTTTaGAAGGCTTCCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLSSLQV*KASSLL
Trigger: CAGGAGAGAGGAAGCCTTGCAAACCTGCAGACTGCT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTCACACTATCCACTGGTaGCACGTGAGAGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLHTIHW*HVRAEH
Trigger: ATGCTCTGCTCTCACGTGGCACCAGTGGATAGTGTG...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGTGCCACATACCAACTaGTGTATTTCCTTGACCGGT +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTVPHTN*CISLTG
Trigger: ACCGGTCAAGGAAATACACCAGTTGGTATGTGGCAC...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCTCTCACACTATCCACTaGTGCCACGTGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSSHTIH*CHVRAE
Trigger: CTCTGCTCTCACGTGGCACCAGTGGATAGTGTGAGA...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
3UTR CAA 72 bp ACCCAATCTATATTGGGCAAAAAGCAGTCTGCAGGTTaGCAAGGCTTCCTCTCTCCTGCATCTTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TQSILGKKQSAG*QGFLSPASCLF
Trigger: GAAAAGGCAAGATGCAGGAGAGAGGAAGCCTTGCAAACCTGCAGACTGCTTTTTGCCCAATATAGATTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCAATTCAGGTCCGTCCTaGGTATTCGGCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSNSGPS*VFGNST
Trigger: TGTGCTGTTGCCGAATACTCAGGACGGACCTGAATT...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGAATTCAGGTCCGTCCTaGGTATTCGGCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWNSGPS*VFGNST
Trigger: TGTGCTGTTGCCGAATACTCAGGACGGACCTGAATT...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGGAGTTGCTAGGCTGCTaGTGTATGGGTACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLELLGC*CMGTEK
Trigger: CTTCTCTGTACCCATACAGCAGCAGCCTAGCAACTC...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTGCAGAGTTGCTAGGCTaGTGCTGTATGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGAELLG*CCMGTE
Trigger: CTCTGTACCCATACAGCAGCAGCCTAGCAACTCTGC...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTACGATTATGGCTCACTaGAACCTTGACCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLTIMAH*NLDLSA
Trigger: GGCTGAGAGGTCAAGGTTGCAGTGAGCCATAATCGT...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCACGATTATGGCTCACTaGAACCTTGACCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSTIMAH*NLDLSA
Trigger: GGCTGAGAGGTCAAGGTTGCAGTGAGCCATAATCGT...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAAGCATATCCAGGGGATaGGTAAGACAGTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTSISRG*VRQSMV
Trigger: TACCATAGACTGTCTTACCCATCCCCTGGATATGCT...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTCTCTGTTGCCTAGGCTaGACTGCAGTGGCACGATTA +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGLCCLG*TAVARL
Trigger: TAATCGTGCCACTGCAGTCCAGCCTAGGCAACAGAG...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
3UTR CAA 72 bp ATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTaGAGGTGGAAGGGTCTCCCGCATACTCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: IHLEILGEEISI*RWKGLPHTLET
Trigger: TGTCTCCAGAGTATGCGGGAGACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTCTACTCAGGCAGTGCTaGTTTTCAGTCAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLLLRQC*FSVSCY
Trigger: ATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAG...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTAGGCCTGTCAGAGCCTaGAGAAGATATTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLRPVRA*RRYWCV
Trigger: TACACACCAATATCTTCTTCAGGCTCTGACAGGCCT...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGGGCAGGAAGAGTATCTaGTGCATTAGCCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWGRKSI*CISQRT
Trigger: AGTTCTCTGGCTAATGCAGCAGATACTCTTCCTGCC...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGTGCCACATACCAACTaGTGTATTTCCTTGACCGGT +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSVPHTN*CISLTG
Trigger: ACCGGTCAAGGAAATACACCAGTTGGTATGTGGCAC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGGCCCAGGTCCTGTTTTaGATCCAAGTTTATACTGCC +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLAQVLF*IQVYTA
Trigger: GGCAGTATAAACTTGGATCCAAAACAGGACCTGGGC...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGATATCCATCTTGAGGTaGAAGGGTCTCCCGCATACT +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLISILR*KGLPHT
Trigger: AGTATGCGGGAGACCCTTCCACCTCAAGATGGATAT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTATATCCATCTTGAGGTaGAAGGGTCTCCCGCATACT +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLISILR*KGLPHT
Trigger: AGTATGCGGGAGACCCTTCCACCTCAAGATGGATAT...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAAAATCGTATTACCACTaGCAGGAAGAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTKSYYH*QEEYLL
Trigger: CAGCAGATACTCTTCCTGCCAGTGGTAATACGATTT...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACACAGTTGAAAAATATGTaGAAGTTTCCAGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTQLKNM*KFPGGL
Trigger: CAGGCCTCCTGGAAACTTCCACATATTTTTCAACTG...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAAAAAGTATAGCTTTCTaGCCAGGTCCTGTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTKSIAF*PGPVLD
Trigger: ATCCAAAACAGGACCTGGGCAGAAAGCTATACTTTT...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTGCCCAGGTCCTGTTTTaGATCCAAGTTTATACTGCC +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGAQVLF*IQVYTA
Trigger: GGCAGTATAAACTTGGATCCAAAACAGGACCTGGGC...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGTTAGAGGGACCATCTaGATGTGTAGAAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSVRGTI*MCRKSS
Trigger: GCTGCTTTTTCTACACATCCAGATGGTCCCTCTAAC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGGTTAGAGGGACCATCTaGATGTGTAGAAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWVRGTI*MCRKSS
Trigger: GCTGCTTTTTCTACACATCCAGATGGTCCCTCTAAC...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTAGCATATCCAGGGGATaGGTAAGACAGTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLSISRG*VRQSMV
Trigger: TACCATAGACTGTCTTACCCATCCCCTGGATATGCT...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCTTGACAAAATTGACCTaGCTGTGGAAGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSLTKLT*LWKNFQ
Trigger: CTGGAAGTTCTTCCACAGTCAGGTCAATTTTGTCAA...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTTGACAAAATTGACCTaGCTGTGGAAGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWLTKLT*LWKNFQ
Trigger: CTGGAAGTTCTTCCACAGTCAGGTCAATTTTGTCAA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGCTCTTATGGGTCCTCTaGATTTCAGCTGTACTTACT +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLLLWVL*ISAVLT
Trigger: AGTAAGTACAGCTGAAATTCAGAGGACCCATAAGAG...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTGATTTTGTAGTGGTGTaGATGCTGAAAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGDFVVV*MLKEKA
Trigger: GGCCTTCTCTTTCAGCATTCACACCACTACAAAATC...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTATCAGAGATCATCAGTaGACTAGAGTCAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLIRDHQ*TRVRGK
Trigger: TTTCCCTCTGACTCTAGTGCACTGATGATCTCTGAT...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGAGGCTTCCTCTCTCCTaGATCTTGCCTTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLRLPLS*ILPFQI
Trigger: TATTTGAAAAGGCAAGATGCAGGAGAGAGGAAGCCT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTGCTTAAGATGTGAGTaGATGGATCTCAATGACCTG +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWCLRCE*MDLNDL
Trigger: CAGGTCATTGAGATCCATCCACTCACATCTTAAGCA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCTGCTTAAGATGTGAGTaGATGGATCTCAATGACCTG +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSCLRCE*MDLNDL
Trigger: CAGGTCATTGAGATCCATCCACTCACATCTTAAGCA...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGAAATCGTATTACCACTaGCAGGAAGAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLKSYYH*QEEYLL
Trigger: CAGCAGATACTCTTCCTGCCAGTGGTAATACGATTT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGCAGTTGAAAAATATGTaGAAGTTTCCAGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWQLKNM*KFPGGL
Trigger: CAGGCCTCCTGGAAACTTCCACATATTTTTCAACTG...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCACTGGTGTATTTCCTTaGCCGGTAAGTATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSTGVFP*PVSIVV
Trigger: AACTACAATACTTACCGGTCAAGGAAATACACCAGT...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGACTGGTGTATTTCCTTaGCCGGTAAGTATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLTGVFP*PVSIVV
Trigger: AACTACAATACTTACCGGTCAAGGAAATACACCAGT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCCCAGCATTTCGGTGTTaGAGAAATGAATCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSPAFRC*RNESKF
Trigger: GAACTTAGATTCATTTCTTCAACACCGAAATGCTGG...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTACATGCCGAACTTTTaGTTAGTGGTACTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLYMPNF*LVVLRA
Trigger: AGCTCTTAGTACCACTAATCAAAAGTTCGGCATGTA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGAAACAGCATAGATCATaGGCTACATGCCGAACTTTT +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLKQHRS*ATCRTF
Trigger: AAAAGTTCGGCATGTAGCTCATGATCTATGCTGTTT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTTTTTGCCAGGAAGAATaGTTAAGATGTGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLFCQEE*LRCEWM
Trigger: CATCCACTCACATCTTAAGCATTCTTCCTGGCAAAA...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGGAAAACCCACATTCTaGAGATTATTTCCCATTATA +
Preference number: 4 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTGKPTF*RLFPII
Trigger: TATAATGGGAAATAATCTGCAGAATGTGGGTTTTCC...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCGGGCAAAAAGCAGTCTaGAGGTTTGCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HISKPNIYNFRPKYTPESGQKAV*RFARLP
Trigger: AGGAAGCCTTGCAAACCTGCAGACTGCTTTTTGCCC...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTGGATCTCAATGACCTaGCGAAGACTGAAAATACAA +
Preference number: 4 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLWISMT*RRLKIQ
Trigger: TTGTATTTTCAGTCTTCGCCAGGTCATTGAGATCCA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTTACAGTCACAGCACATaGGAATTGAGACATGTTTCT +
Preference number: 4 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLYSHST*ELRHVS
Trigger: AGAAACATGTCTCAATTCCCATGTGCTGTGACTGTA...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTACAGTCACAGCACATaGGAATTGAGACATGTTTCT +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWYSHST*ELRHVS
Trigger: AGAAACATGTCTCAATTCCCATGTGCTGTGACTGTA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCTACAGTCACAGCACATaGGAATTGAGACATGTTTCT +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSYSHST*ELRHVS
Trigger: AGAAACATGTCTCAATTCCCATGTGCTGTGACTGTA...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTTACCCAATCTATATTaGGCAAAAAGCAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWLPNLY*AKSSLQ
Trigger: CTGCAGACTGCTTTTTGCCCAATATAGATTGGGTAA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCACGAGGGAGAAAGGATaGAAGCTAGAAAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSTREKG*KLEKFC
Trigger: GCAAAATTTTTCTAGCTTCCATCCTTTCTCCCTCGT...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGACGAGGGAGAAAGGATaGAAGCTAGAAAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWTREKG*KLEKFC
Trigger: GCAAAATTTTTCTAGCTTCCATCCTTTCTCCCTCGT...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTCCAGCATTTCGGTGTTaGAGAAATGAATCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGPAFRC*RNESKF
Trigger: GAACTTAGATTCATTTCTTCAACACCGAAATGCTGG...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR GCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCACTACCCCCATCCAGTaGTTCCACGACATAGAAACA +
Preference number: 4 (lower is better)
Translates to: HISKPNIYNFRPKYTPESTTPIQ*FHDIET
Trigger: TGTTTCTATGTCGTGGAAGCACTGGATGGGGGTAGT...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CCA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTTGGATCTCAATGACCTaGCGAAGACTGAAAATACAA +
Preference number: 4 (lower is better)
Translates to: SIHLEILGEEISILRWKGWISMT*RRLKIQ
Trigger: TTGTATTTTCAGTCTTCGCCAGGTCATTGAGATCCA...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR TCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCGATTTTGTAGTGGTGTaGATGCTGAAAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HISKPNIYNFRPKYTPESDFVVV*MLKEKA
Trigger: GGCCTTCTCTTTCAGCATTCACACCACTACAAAATC...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGGGAAAACCCACATTCTaGAGATTATTTCCCATTATA +
Preference number: 4 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWGKPTF*RLFPII
Trigger: TATAATGGGAAATAATCTGCAGAATGTGGGTTTTCC...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCCTCTTATGGGTCCTCTaGATTTCAGCTGTACTTACT +
Preference number: 4 (lower is better)
Translates to: HISKPNIYNFRPKYTPESLLWVL*ISAVLT
Trigger: AGTAAGTACAGCTGAAATTCAGAGGACCCATAAGAG...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR GCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCATCAGAGATCATCAGTaGACTAGAGTCAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: HISKPNIYNFRPKYTPESIRDHQ*TRVRGK
Trigger: TTTCCCTCTGACTCTAGTGCACTGATGATCTCTGAT...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCACTGGTGTATTTCCTTaGCCGGTAAGTATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: HISKPNIYNFRPKYTPESTGVFP*PVSIVV
Trigger: AACTACAATACTTACCGGTCAAGGAAATACACCAGT...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR TCA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCCCAGCATTTCGGTGTTaGAGAAATGAATCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: HISKPNIYNFRPKYTPESPAFRC*RNESKF
Trigger: GAACTTAGATTCATTTCTTCAACACCGAAATGCTGG...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS GCA 90 bp CCAGCCTCGAGCCGCTCGGCCGCTCTTCTGTCCGCCGGCCCCTGGTaGGCGGCGAGCCGGCGGCCCGGGACCTGGGGTTCACGGATGGGT +
Preference number: 5 (lower is better)
Translates to: PASSRSAALLSAGPW*AASRRPGTWGSRMG
Trigger: ACCCATCCGTGAACCCCAGGTCCCGGGCCGCCGGCTCGCCGCGCACCAGGGGCCGGCGGACAGAAGAGCGGCCGAGCGGCTCGAGGCTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS GCA 90 bp GCCGCCATCCTCGGGCAAGGCGGGCAGCGTGGTGATGCTCCCGGCTaGCATGGTCCCTGCGGGGCCCGGCCGGGATCCCCGAGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: AAILGQGGQRGDAPG*HGPCGARPGSPSRW
Trigger: CCAGCGGCTCGGGGATCCCGGCCGGGCCCCGCAGGGACCATGGCAGCCGGGAGCATCACCACGCTGCCCGCCTTGCCCGAGGATGGCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS CCA 90 bp CCTGGTGCGCGGCGAGCCGGCGGCCCGGGACCTGGGGTTCACGGATaGGTGTCTCCGCGGACGCCGCCTGGGGAGAGCCGCCTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PGARRAGGPGPGVHG*VSPRTPPGESRLPS
Trigger: GCTTGGGAGGCGGCTCTCCCCAGGCGGCGTCCGCGGAGACACCCATCCGTGAACCCCAGGTCCCGGGCCGCCGGCTCGCCGCGCACCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS TCA 90 bp GGAAGGCGCCGCTGCCGCCATCCTCGGGCAAGGCGGGCAGCGTGGTaGTGCTCCCGGCTGCCATGGTCCCTGCGGGGCCCGGCCGGGATC +
Preference number: 5 (lower is better)
Translates to: GRRRCRHPRARRAAW*CSRLPWSLRGPAGI
Trigger: GATCCCGGCCGGGCCCCGCAGGGACCATGGCAGCCGGGAGCATCACCACGCTGCCCGCCTTGCCCGAGGATGGCGGCAGCGGCGCCTTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS CCA 90 bp CCCGGGACCTGGGGTTCACGGATGGGTGTCTCCGCGGACGCCGCCTaGGGAGAGCCGCCTCCCAAGCTGCAGCGCCCGGGATCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: PGTWGSRMGVSADAA*GEPPPKLQRPGSRC
Trigger: GCAACGGGATCCCGGGCGCTGCAGCTTGGGAGGCGGCTCTCCCCAGGCGGCGTCCGCGGAGACACCCATCCGTGAACCCCAGGTCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS CCA 90 bp GCGCCCGGGATCCCGTTGCAACCGCGGGCACCGCGTCCGCTAATCTaGCACCCGCCGGGCCGCGGCGTCACATCTTCTACATCTCCACCC +
Preference number: 5 (lower is better)
Translates to: APGIPLQPRAPRPLI*HPPGRGVTSSTSPP
Trigger: GGGTGGAGATGTAGAAGATGTGACGCCGCGGCCCGGCGGGTGCCAGATTAGCGGACGCGGTGCCCGCGGTTGCAACGGGATCCCGGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264498.8
CDS-3UTR CAA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGCGCCCGGGATCCCGTaGCAACCGCGGGCACCGCGT +
Preference number: 5 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSAPGIP*QPRAPR
Trigger: ACGCGGTGCCCGCGGTTGCAACGGGATCCCGGGCGC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTGCGCCCGGGATCCCGTaGCAACCGCGGGCACCGCGT +
Preference number: 5 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLAPGIP*QPRAPR
Trigger: ACGCGGTGCCCGCGGTTGCAACGGGATCCCGGGCGC...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATACGGGGTTTCACCAGGTaGGTCTTGAACTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIRGFTR*VLNSWA
Trigger: AGCCCAGGAGTTCAAGACCAACCTGGTGAAACCCCG...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATACTGAGCAGGGCAGATTaGCTCACTACCCCCATCCAG +
Preference number: 5 (lower is better)
Translates to: LLSRADLLTTPIQCFHDILSRAD*LTTPIQ
Trigger: CTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAG...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTAGCCGCTTGGGGTCCTaGAAGTGGCCGGGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLSRLGS*KWPGGK
Trigger: CTTCCCGCCCGGCCACTTCAAGGACCCCAAGCGGCT...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGAGCCGCTTGGGGTCCTaGAAGTGGCCGGGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLSRLGS*KWPGGK
Trigger: CTTCCCGCCCGGCCACTTCAAGGACCCCAAGCGGCT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCGCGCCCGGGATCCCGTaGCAACCGCGGGCACCGCGT +
Preference number: 5 (lower is better)
Translates to: HISKPNIYNFRPKYTPESAPGIP*QPRAPR
Trigger: ACGCGGTGCCCGCGGTTGCAACGGGATCCCGGGCGC...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTTGCAGTACAGCCGCTaGGGGTCCTTGAAGTGGCCG +
Preference number: 5 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLLQYSR*GSLKWP
Trigger: CGGCCACTTCAAGGACCCCAAGCGGCTGTACTGCAA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCTTGCAGTACAGCCGCTaGGGGTCCTTGAAGTGGCCG +
Preference number: 5 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSLQYSR*GSLKWP
Trigger: CGGCCACTTCAAGGACCCCAAGCGGCTGTACTGCAA...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGAAGAAGCCCCCGTTTTaGCAGTACAGCCGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLKKPPF*QYSRLG
Trigger: CCCCAAGCGGCTGTACTGCAAAAACGGGGGCTTCTT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATACAAATCCTGGAGCTTTaGGGAAGTCAGATATGTATA +
Preference number: 5 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIQILEL*GSQICI
Trigger: TATACATATCTGACTTCCCAAAAGCTCCAGGATTTG...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTCGGGGTTTCACCAGGTaGGTCTTGAACTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLRGFTR*VLNSWA
Trigger: AGCCCAGGAGTTCAAGACCAACCTGGTGAAACCCCG...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGCGGGGTTTCACCAGGTaGGTCTTGAACTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWRGFTR*VLNSWA
Trigger: AGCCCAGGAGTTCAAGACCAACCTGGTGAAACCCCG...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTCTGAGCAGGGCAGATTaGCTCACTACCCCCATCCAG +
Preference number: 5 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLLSRAD*LTTPIQ
Trigger: CTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAG...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTAAGAAGCCCCCGTTTTaGCAGTACAGCCGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: SIHLEILGEEISILRWKGKKPPF*QYSRLG
Trigger: CCCCAAGCGGCTGTACTGCAAAAACGGGGGCTTCTT...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGCCATCACCAGCAGAGTaGCTAGGCTGCTGCTGTATG +
Preference number: 5 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLPSPAE*LGCCCM
Trigger: CATACAGCAGCAGCCTAGCAACTCTGCTGGTGATGG...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGACAAAAGCACTTATTaGCCCATTCAATTTTCAGTC +
Preference number: 5 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIDKSTY*PIQFSV
Trigger: GACTGAAAATTGAATGGGCAAATAAGTGCTTTTGTC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAGGGAAACACATTTGTTaGAACTCCTTCATTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LLSRADLLTTPIQCFHDIGKHIC*NSFILS
Trigger: TGAAAGAATGAAGGAGTTCAAACAAATGTGTTTCCC...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp CTGCTGAGCAGGGCAGATTTGCTCACTACCCCCATCCAGTGCTTCCACGACATAAACTGGGAAACACATTaGTTTGAACTCCTTCATTCT +
Preference number: 5 (lower is better)
Translates to: LLSRADLLTTPIQCFHDINWETH*FELLHS
Trigger: AGAATGAAGGAGTTCAAACAAATGTGTTTCCCAGTT...TATGTCGTGGAAGCACTGGATGGGGGTAGTGAGCAAATCTGCCCTGCTCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACATTAGCACACACTCCTTaGATAGACACAACTCCTCTC +
Preference number: 5 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTLAHTP*IDTTPL
Trigger: GAGAGGAGTTGTGTCTATCAAAGGAGTGTGTGCTAA...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTGAAGAAATATCCATCTaGAGGTGGAAGGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLEEISI*RWKGLP
Trigger: CGGGAGACCCTTCCACCTCAAGATGGATATTTCTTC...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGGAAGAAATATCCATCTaGAGGTGGAAGGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLEEISI*RWKGLP
Trigger: CGGGAGACCCTTCCACCTCAAGATGGATATTTCTTC...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCAAGAAGCCCCCGTTTTaGCAGTACAGCCGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: HISKPNIYNFRPKYTPESKKPPF*QYSRLG
Trigger: CCCCAAGCGGCTGTACTGCAAAAACGGGGGCTTCTT...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTGAAGAAATATCCATCTaGAGGTGGAAGGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: SIHLEILGEEISILRWKGEEISI*RWKGLP
Trigger: CGGGAGACCCTTCCACCTCAAGATGGATATTTCTTC...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAAAAAAGTGCTTGTGGTaGTCACAACAACTCACCTAC +
Preference number: 5 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTKKCLW*SQQLTY
Trigger: GTAGGTGAGTTGTTGTGACAACCACAAGCACTTTTT...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTTTAGCACACACTCCTTaGATAGACACAACTCCTCTC +
Preference number: 5 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLLAHTP*IDTTPL
Trigger: GAGAGGAGTTGTGTCTATCAAAGGAGTGTGTGCTAA...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGTTAGCACACACTCCTTaGATAGACACAACTCCTCTC +
Preference number: 5 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWLAHTP*IDTTPL
Trigger: GAGAGGAGTTGTGTCTATCAAAGGAGTGTGTGCTAA...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAAACTGGTGTATTTCCTaGACCGGTAAGTATTGTAGT +
Preference number: 5 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTNWCIS*TGKYCS
Trigger: ACTACAATACTTACCGGTCAAGGAAATACACCAGTT...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGCACAGCACATGGGAATaGAGACATGTTTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWHSTWE*RHVSVT
Trigger: AGTCACAGAAACATGTCTCAATTCCCATGTGCTGTG...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGCTACATGCCGAACTTTaGATTAGTGGTACTAAGAGC +
Preference number: 5 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLLHAEL*ISGTKS
Trigger: GCTCTTAGTACCACTAATCAAAAGTTCGGCATGTAG...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGCTACATGCCGAACTTTaGATTAGTGGTACTAAGAGC +
Preference number: 5 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWLHAEL*ISGTKS
Trigger: GCTCTTAGTACCACTAATCAAAAGTTCGGCATGTAG...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACATTCATCTTGAAATCCTaGGGGAAGAAATATCCATCT +
Preference number: 5 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTFILKS*GKKYPS
Trigger: AGATGGATATTTCTTCCCCAAGGATTTCAAGATGAA...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AGCATATCCAGGGGATGGGTAAGACAGTCTATGGTAAGACAGTCTACAGTCACAGGGAAACACATTTGTTaGAACTCCTTCATTCTTTCA +
Preference number: 5 (lower is better)
Translates to: SISRGWVRQSMVRQSTVTGKHIC*NSFILS
Trigger: TGAAAGAATGAAGGAGTTCAAACAAATGTGTTTCCC...TGTGACTGTAGACTGTCTTACCATAGACTGTCTTACCCATCCCCTGGATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGAAAAAGTGCTTGTGGTaGTCACAACAACTCACCTAC +
Preference number: 5 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWKKCLW*SQQLTY
Trigger: GTAGGTGAGTTGTTGTGACAACCACAAGCACTTTTT...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGAAAGAGAAGGCCATTaGTTCTACAGCCTAATTCTC +
Preference number: 5 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSEREGH*FYSLIL
Trigger: GAGAATTAGGCTGTAGAACAAATGGCCTTCTCTTTC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGAACTGGTGTATTTCCTaGACCGGTAAGTATTGTAGT +
Preference number: 5 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLNWCIS*TGKYCS
Trigger: ACTACAATACTTACCGGTCAAGGAAATACACCAGTT...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GTTAAACTGATCAAAACTACTCAGGCAGTGCTGATTTTCAGTCAGCTGCTATGGCAAATCCTGGAGCTTTaGGGAAGTCAGATATGTATA +
Preference number: 5 (lower is better)
Translates to: VKLIKTTQAVLIFSQLLWQILEL*GSQICI
Trigger: TATACATATCTGACTTCCCAAAAGCTCCAGGATTTG...CCATAGCAGCTGACTGAAAATCAGCACTGCCTGAGTAGTTTTGATCAGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTCAAATCCTGGAGCTTTaGGGAAGTCAGATATGTATA +
Preference number: 5 (lower is better)
Translates to: SIHLEILGEEISILRWKGQILEL*GSQICI
Trigger: TATACATATCTGACTTCCCAAAAGCTCCAGGATTTG...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTCTTCTCCTAAATACTTaGGGAGACAATGACAGAACA +
Preference number: 5 (lower is better)
Translates to: SIHLEILGEEISILRWKGLLLNT*GDNDRT
Trigger: TGTTCTGTCATTGTCTCCCAAAGTATTTAGGAGAAG...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp AATTGTGAAGCTTTCCAGCAAAGTGGTAGAGGAAGGCAGCTTTTTAAAGGGCTTGACAAAAGCACTTATTaGCCCATTCAATTTTCAGTC +
Preference number: 5 (lower is better)
Translates to: NCEAFQQSGRGRQLFKGLDKSTY*PIQFSV
Trigger: GACTGAAAATTGAATGGGCAAATAAGTGCTTTTGTC...AAGCCCTTTAAAAAGCTGCCTTCCTCTACCACTTTGCTGGAAAGCTTCACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CACAAAATTAGAGAAAGCCCAGTTAGAGGGACCATCTGGATGTGTAGAAAAAGCGACAAAAGCACTTATTaGCCCATTCAATTTTCAGTC +
Preference number: 5 (lower is better)
Translates to: HKIRESPVRGTIWMCRKSDKSTY*PIQFSV
Trigger: GACTGAAAATTGAATGGGCAAATAAGTGCTTTTGTC...GCTTTTTCTACACATCCAGATGGTCCCTCTAACTGGGCTTTCTCTAATTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp GCAACAGCACACAAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATCATCTGTTCATCTTGAAATCCTaGGGGAAGAAATATCCATCT +
Preference number: 5 (lower is better)
Translates to: ATAHKSWSFWEVRYVYHLFILKS*GKKYPS
Trigger: AGATGGATATTTCTTCCCCAAGGATTTCAAGATGAA...CAGATGATATACATATCTGACTTCCCAAAAGCTCCAGGATTTGTGTGCTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCCACAGCACATGGGAATaGAGACATGTTTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: HISKPNIYNFRPKYTPESHSTWE*RHVSVT
Trigger: AGTCACAGAAACATGTCTCAATTCCCATGTGCTGTG...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp TCAATTCATCTTGAAATCCTTGGGGAAGAAATATCCATCTTGAGGTGGAAGGGTTTCATCTTGAAATCCTaGGGGAAGAAATATCCATCT +
Preference number: 5 (lower is better)
Translates to: SIHLEILGEEISILRWKGFILKS*GKKYPS
Trigger: AGATGGATATTTCTTCCCCAAGGATTTCAAGATGAA...ACCCTTCCACCTCAAGATGGATATTTCTTCCCCAAGGATTTCAAGATGAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS-3UTR CAA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCCTTCTCCTAAATACTTaGGGAGACAATGACAGAACA +
Preference number: 5 (lower is better)
Translates to: HISKPNIYNFRPKYTPESLLLNT*GDNDRT
Trigger: TGTTCTGTCATTGTCTCCCAAAGTATTTAGGAGAAG...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS-3UTR CAA 90 bp CACATTTCCAAGCCAAATATATATAATTTCAGGCCTAAGTATACTCCAGAATCCAACTGGGAAACACATTaGTTTGAACTCCTTCATTCT +
Preference number: 5 (lower is better)
Translates to: HISKPNIYNFRPKYTPESNWETH*FELLHS
Trigger: AGAATGAAGGAGTTCAAACAAATGTGTTTCCCAGTT...GGATTCTGGAGTATACTTAGGCCTGAAATTATATATATTTGGCTTGGAAATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264498.8
ENST00000644866.2
CDS GCA 72 bp GGGCAGCGTGGTGATGCTCCCGGCTGCCATGGTCCCTaGGGGGCCCGGCCGGGATCCCCGAGCCGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: GQRGDAPGCHGP*GARPGSPSRWS
Trigger: GCTCCAGCGGCTCGGGGATCCCGGCCGGGCCCCGCAGGGACCATGGCAGCCGGGAGCATCACCACGCTGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS GCA 72 bp CTCGGGCAAGGCGGGCAGCGTGGTGATGCTCCCGGCTaGCATGGTCCCTGCGGGGCCCGGCCGGGATCCCCG +
Preference number: 6 (lower is better)
Translates to: LGQGGQRGDAPG*HGPCGARPGSP
Trigger: CGGGGATCCCGGCCGGGCCCCGCAGGGACCATGGCAGCCGGGAGCATCACCACGCTGCCCGCCTTGCCCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS TCA 72 bp CGCTGCCGCCATCCTCGGGCAAGGCGGGCAGCGTGGTaGTGCTCCCGGCTGCCATGGTCCCTGCGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: RCRHPRARRAAW*CSRLPWSLRGP
Trigger: CGGGCCCCGCAGGGACCATGGCAGCCGGGAGCATCACCACGCTGCCCGCCTTGCCCGAGGATGGCGGCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS CCA 72 bp TGGGGTTCACGGATGGGTGTCTCCGCGGACGCCGCCTaGGGAGAGCCGCCTCCCAAGCTGCAGCGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: WGSRMGVSADAA*GEPPPKLQRPG
Trigger: TCCCGGGCGCTGCAGCTTGGGAGGCGGCTCTCCCCAGGCGGCGTCCGCGGAGACACCCATCCGTGAACCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS CAA 72 bp AGAGCCGCCTCCCAAGCTGCAGCGCCCGGGATCCCGTaGCAACCGCGGGCACCGCGTCCGCTAATCTGGCAC +
Preference number: 6 (lower is better)
Translates to: RAASQAAAPGIP*QPRAPRPLIWH
Trigger: GTGCCAGATTAGCGGACGCGGTGCCCGCGGTTGCAACGGGATCCCGGGCGCTGCAGCTTGGGAGGCGGCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264498.8
CDS CCA 72 bp ATCCCGTTGCAACCGCGGGCACCGCGTCCGCTAATCTaGCACCCGCCGGGCCGCGGCGTCACATCTTCTACA +
Preference number: 6 (lower is better)
Translates to: IPLQPRAPRPLI*HPPGRGVTSST
Trigger: TGTAGAAGATGTGACGCCGCGGCCCGGCGGGTGCCAGATTAGCGGACGCGGTGCCCGCGGTTGCAACGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264498.8
CDS CCA 72 bp CCGTTTTTGCAGTACAGCCGCTTGGGGTCCTTGAAGTaGCCGGGCGGGAAGGCGCCGCTGCCGCCATCCTCG +
Preference number: 6 (lower is better)
Translates to: PFLQYSRLGSLK*PGGKAPLPPSS
Trigger: CGAGGATGGCGGCAGCGGCGCCTTCCCGCCCGGCCACTTCAAGGACCCCAAGCGGCTGTACTGCAAAAACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2
CDS CCA 72 bp TATACTGCCCAGTTCGTTTCAGTGCCACATACCAACTaGTGTATTTCCTTGACCGGTAAGTATTGTAGTTAT +
Preference number: 6 (lower is better)
Translates to: YTAQFVSVPHTN*CISLTGKYCSY
Trigger: ATAACTACAATACTTACCGGTCAAGGAAATACACCAGTTGGTATGTGGCACTGAAACGAACTGGGCAGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264498.8
ENST00000608478.1
ENST00000644866.2