Pregenerated sensors for FGF16 (Homo sapiens)
Ensembl gene IDs: ENSG00000196468Ensembl transcript IDs: ENST00000439435.3
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATCTCCCACTTCCAATGACAGGAAAACTGCATGTCAGGACAGATaGGAAATCTGCAGAGCCAATGCAGGGAAGGCTTGCAGCAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: PSPTSNDRKTACQDR*EICRANAGKACSKA Trigger: AGCCTTGCTGCAAGCCTTCCCTGCATTGGCTCTGCAGATTTCTCATCTGTCCTGACATGCAGTTTTCCTGTCATTGGAAGTGGGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| 3UTR CAA 90 bp | ATGTCAGGACAGATGAGAAATCTGCAGAGCCAATGCAGGGAAGGCTaGCAGCAAGGCTGTAGCCCCAAGGATTTTCTTAATGAGACTTTT | + |
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Preference number: 2 (lower is better) Translates to: MSGQMRNLQSQCREG*QQGCSPKDFLNETF Trigger: AAAAGTCTCATTAAGAAAATCCTTGGGGCTACAGCCTTGCTGCAAGCCTTCCCTGCATTGGCTCTGCAGATTTCTCATCTGTCCTGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| 3UTR-3UTR GCA 90 bp | AACCTTGATATACACTTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTTATGAATATAGTGCTTaGAGAGACAACCGTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: NLDIHFEQQGNSWVEFNSYEYSA*RDNRGP Trigger: GGGGCCACGGTTGTCTCTGCAAGCACTATATTCATA...ACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAAGTGTATATCAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| 3UTR GCA 72 bp | TGCATGTCAGGACAGATGAGAAATCTGCAGAGCCAATaGAGGGAAGGCTTGCAGCAAGGCTGTAGCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: CMSGQMRNLQSQ*REGLQQGCSPK Trigger: CTTGGGGCTACAGCCTTGCTGCAAGCCTTCCCTGCATTGGCTCTGCAGATTTCTCATCTGTCCTGACATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| 3UTR TCA 72 bp | ACTTCCAATGACAGGAAAACTGCATGTCAGGACAGATaGGAAATCTGCAGAGCCAATGCAGGGAAGGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: TSNDRKTACQDR*EICRANAGKAC Trigger: GCAAGCCTTCCCTGCATTGGCTCTGCAGATTTCTCATCTGTCCTGACATGCAGTTTTCCTGTCATTGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| 3UTR GCA 72 bp | AGGAAGGAAGGATTGAAAAGCTATGAATATAGTGCTTaGAGAGACAACCGTGGCCCCAGGGTACATGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: RKEGLKSYEYSA*RDNRGPRVHGS Trigger: TGACCCATGTACCCTGGGGCCACGGTTGTCTCTGCAAGCACTATATTCATAGCTTTTCAATCCTTCCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| 3UTR CCA 72 bp | AACCTTGATATACACTTTGAACAACAAGGGAACAGCTaGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTATC | + |
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Preference number: 3 (lower is better) Translates to: NLDIHFEQQGNS*VEFNSKCFSVI Trigger: GATAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAAGTGTATATCAAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | AGAGACAACCGTGGCCCCAGGGTACATGGGTCACAGAGGGCACACCAGAGGTTCTTGCGGCGCTGGTTGTaGTGGGCGCGCGCGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: RDNRGPRVHGSQRAHQRFLRRWL*WARAGR Trigger: TCGGCCCGCGCGCGCCCAGCACAACCAGCGCCGCAA...GAACCTCTGGTGTGCCCTCTGTGACCCATGTACCCTGGGGCCACGGTTGTCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | AGAGACAACCGTGGCCCCAGGGTACATGGGTCACAGAGGGCACACCAGAGGTTCGGCCGATTGCGGCGCTaGTTGTGCTGGGCGCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RDNRGPRVHGSQRAHQRFGRLRR*LCWARA Trigger: CGCGCGCGCCCAGCACAACCAGCGCCGCAATCGGCC...GAACCTCTGGTGTGCCCTCTGTGACCCATGTACCCTGGGGCCACGGTTGTCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | AGAGACAACCGTGGCCCCAGGGTACATGGGTCACAGAGGGCACACCAGAGGTTCCCCCCACCTCTGCCATaGCTGGGCCGATTGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RDNRGPRVHGSQRAHQRFPPPLP*LGRLRR Trigger: GCGCCGCAATCGGCCCAGCCATGGCAGAGGTGGGGG...GAACCTCTGGTGTGCCCTCTGTGACCCATGTACCCTGGGGCCACGGTTGTCTCT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | AGAGACAACCGTGGCCCCAGGGTACATGGGTCACAGAGGGCACACCAGAGGTTCCACCTCTGCCATGGCTaGGCCGATTGCGGCGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RDNRGPRVHGSQRAHQRFHLCHG*ADCGAG Trigger: ACCAGCGCCGCAATCGGCCCAGCCATGGCAGAGGTG...GAACCTCTGGTGTGCCCTCTGTGACCCATGTACCCTGGGGCCACGGTTGTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | AGAGACAACCGTGGCCCCAGGGTACATGGGTCACAGAGGGCACACCAGAGGTTCAGCTTCCCCTCGATTTaGCCCAGGCGCTCGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RDNRGPRVHGSQRAHQRFSFPSI*PRRSFR Trigger: CCTGAACGAGCGCCTGGGCCAAATCGAGGGGAAGCT...GAACCTCTGGTGTGCCCTCTGTGACCCATGTACCCTGGGGCCACGGTTGTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | GTCAGGACAGATGAGAAATCTGCAGAGCCAATGCAGGGAAGGCTTGCAGCAAGGCGCGCTCTGCCGAGCTaGAGTCGACGTCTGTTCGCG | + |
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Preference number: 4 (lower is better) Translates to: VRTDEKSAEPMQGRLAARRALPS*SRRLFA Trigger: CGCGAACAGACGTCGACTGCAGCTCGGCAGAGCGCG...CCTTGCTGCAAGCCTTCCCTGCATTGGCTCTGCAGATTTCTCATCTGTCCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | GTCAGGACAGATGAGAAATCTGCAGAGCCAATGCAGGGAAGGCTTGCAGCAAGGATTCCGAAGCGGCTGTaGTCGTGGCGGGTCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: VRTDEKSAEPMQGRLAARIPKRL*SWRVPC Trigger: GCACGGGACCCGCCACGACCACAGCCGCTTCGGAAT...CCTTGCTGCAAGCCTTCCCTGCATTGGCTCTGCAGATTTCTCATCTGTCCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR TCA 90 bp | CTACCCCATCTCCCACTTCCAATGACAGGAAAACTGCATGTCAGGACAGATGAGCCACTCCCCGGATGCTaGTCAGCCCCACAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LPHLPLPMTGKLHVRTDEPLPGC*SAPQPG Trigger: GCCTGGCTGTGGGGCTGATCAGCATCCGGGGAGTGG...CTCATCTGTCCTGACATGCAGTTTTCCTGTCATTGGAAGTGGGAGATGGGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGGAAGGATTGAAAAGCTATGAATATAGTGCTTGCAGAGACAACCGTGGCCATGGCTGGGCCGATTaGGGCGCTGGTTGTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RKEGLKSYEYSACRDNRGHGWAD*GAGCAG Trigger: CCCAGCACAACCAGCGCCGCAATCGGCCCAGCCATG...GCCACGGTTGTCTCTGCAAGCACTATATTCATAGCTTTTCAATCCTTCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | TTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTATCGTGGCGGGTCCCGTaGACCGTGCCGTTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LNNKGTAGLSSTVSAFLLSWRVP*TVPLGK Trigger: CTTCCCCAACGGCACGGTGCACGGGACCCGCCACGA...TAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | CATTTATACCCATTGTCAAGGTATTTGAGTAAATTGTGGGGTAAGACACCCCTGAAGCGGCTGTGGTCGTaGCGGGTCCCGTGCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: HLYPLSRYLSKLWGKTPLKRLWS*RVPCTV Trigger: CACGGTGCACGGGACCCGCCACGACCACAGCCGCTT...CAGGGGTGTCTTACCCCACAATTTACTCAAATACCTTGACAATGGGTATAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR TCA 90 bp | AACCTTGATATACACTTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTGGCGAAGTCTGTGGGTaGGCCACGCTGCAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: NLDIHFEQQGNSWVEFNSGEVCG*ATLQLP Trigger: GGGAAGCTGCAGCGTGGCTCACCCACAGACTTCGCC...ACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAAGTGTATATCAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | TTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTACAAGGAACTTCTCAGTaGCGGGGAGCGCGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LNNKGTAGLSSTVSAFLLQGTSQ*RGARGS Trigger: GCTGCCCCGCGCTCCCCGCCACTGAGAAGTTCCTTG...TAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | TTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTAGGGTCCCGTGCACCGTaGCGTTGGGGAAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LNNKGTAGLSSTVSAFLLGSRAP*RWGRSP Trigger: TGGAGATCTTCCCCAACGGCACGGTGCACGGGACCC...TAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | TTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTAGGTGGGCGAAGTCTGTaGGTGAGCCACGCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LNNKGTAGLSSTVSAFLLGGRSL*VSHAAA Trigger: AGCTGCAGCGTGGCTCACCCACAGACTTCGCCCACC...TAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR TCA 90 bp | CATTTATACCCATTGTCAAGGTATTTGAGTAAATTGTGGGGTAAGACACCCCTGGGGGCAGCGTGCTCCTaGCCTTGCTCTCAGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: HLYPLSRYLSKLWGKTPLGAACS*PCSQSK Trigger: CTTTGACTGAGAGCAAGGTCAGGAGCACGCTGCCCC...CAGGGGTGTCTTACCCCACAATTTACTCAAATACCTTGACAATGGGTATAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | TTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTGTGGGTGAGCCACGCTaGAGCTTCCCCTCGATTTGG | + |
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Preference number: 4 (lower is better) Translates to: FEQQGNSWVEFNSKCFSVVGEPR*SFPSIW Trigger: CCAAATCGAGGGGAAGCTGCAGCGTGGCTCACCCAC...AACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | AACCTTGATATACACTTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTTTGCAGAGACAACCGTaGCCCCAGGGTACATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: NLDIHFEQQGNSWVEFNSLQRQP*PQGTWV Trigger: GACCCATGTACCCTGGGGCCACGGTTGTCTCTGCAA...ACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAAGTGTATATCAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | CATTTATACCCATTGTCAAGGTATTTGAGTAAATTGTGGGGTAAGACACCCCTGTGCTCTCAGTCAAAGTaGCTCTTCCCCTCCGCATCC | + |
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Preference number: 4 (lower is better) Translates to: HLYPLSRYLSKLWGKTPLCSQSK*LFPSAS Trigger: GGATGCGGAGGGGAAGAGGCACTTTGACTGAGAGCA...CAGGGGTGTCTTACCCCACAATTTACTCAAATACCTTGACAATGGGTATAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | CATTTATACCCATTGTCAAGGTATTTGAGTAAATTGTGGGGTAAGACACCCCTGAGGATCCCCTTTAGGTaGGCGAAGTCTGTGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HLYPLSRYLSKLWGKTPLRIPFR*AKSVGE Trigger: CTCACCCACAGACTTCGCCCACCTAAAGGGGATCCT...CAGGGGTGTCTTACCCCACAATTTACTCAAATACCTTGACAATGGGTATAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | GCAGATTCCTTGGCCTTTCATTTATACCCATTGTCAAGGTATTTGAGTAAATTGCGTGCACCGTGCCGTTaGGGAAGATCTCCAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: ADSLAFHLYPLSRYLSKLRAPCR*GRSPGG Trigger: TCCACCTGGAGATCTTCCCCAACGGCACGGTGCACG...CAATTTACTCAAATACCTTGACAATGGGTATAAATGAAAGGCCAAGGAATCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR TCA 90 bp | CTACCCCATCTCCCACTTCCAATGACAGGAAAACTGCATGTCAGGACAGATGAGGTAATACTGTCTCTCTaGGTCCGAATGTTTGTACAA | + |
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Preference number: 4 (lower is better) Translates to: LPHLPLPMTGKLHVRTDEVILSL*VRMFVQ Trigger: TTGTACAAACATTCGGACTCAGAGAGACAGTATTAC...CTCATCTGTCCTGACATGCAGTTTTCCTGTCATTGGAAGTGGGAGATGGGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR TCA 90 bp | TTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTGCATGTCAGGACAGATaGGAAATCTGCAGAGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: FEQQGNSWVEFNSKCFSVACQDR*EICRAN Trigger: ATTGGCTCTGCAGATTTCTCATCTGTCCTGACATGC...AACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | AACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTATCTTATGAATATAGTGCTTaGAGAGACAACCGTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NNKGTAGLSSTVSAFLLSYEYSA*RDNRGP Trigger: GGGGCCACGGTTGTCTCTGCAAGCACTATATTCATA...AGATAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | AACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTATCTTCCCATTCTTTGTTATaGTACCTCAGGGGAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: NNKGTAGLSSTVSAFLLSSHSLL*YLRGRN Trigger: GTTCCTTCCCCTGAGGTAGCATAACAAAGAATGGGA...AGATAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | GCAGATTCCTTGGCCTTTCATTTATACCCATTGTCAAGGTATTTGAGTAAATTGAATCTGCAGAGCCAATaGAGGGAAGGCTTGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ADSLAFHLYPLSRYLSKLNLQSQ*REGLQQ Trigger: TTGCTGCAAGCCTTCCCTGCATTGGCTCTGCAGATT...CAATTTACTCAAATACCTTGACAATGGGTATAAATGAAAGGCCAAGGAATCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR TCA 90 bp | TTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTAAACACATTCACGTGTaGGTTTCTTCGACCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: FEQQGNSWVEFNSKCFSVKHIHV*VSSTHR Trigger: TCTATGGGTCGAAGAAACTCACACGTGAATGTGTTT...AACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR TCA 90 bp | TTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTAATGTTTGTACAAGGTTaGGGCATAGGTGTTGTACCA | + |
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Preference number: 4 (lower is better) Translates to: LNNKGTAGLSSTVSAFLLMFVQG*GIGVVP Trigger: TGGTACAACACCTATGCCTCAACCTTGTACAAACAT...TAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR TCA 90 bp | AACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTATCTAAAATCTCCCACTTCCAATaGCAGGAAAACTGCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: NKGTAGLSSTVSAFLLSKISHFQ*QENCMS Trigger: TGACATGCAGTTTTCCTGTCATTGGAAGTGGGAGAT...TTTAGATAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CCA 90 bp | GCAGATTCCTTGGCCTTTCATTTATACCCATTGTCAAGGTATTTGAGTAAATTGCAACAAGGGAACAGCTaGGTTGAGTTCAACAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: ADSLAFHLYPLSRYLSKLQQGNS*VEFNSK Trigger: CTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTG...CAATTTACTCAAATACCTTGACAATGGGTATAAATGAAAGGCCAAGGAATCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR GCA 90 bp | AACCTTGATATACACTTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAATAGTTTGTCCTTATaGACAGTATCCATGCTTACA | + |
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Preference number: 4 (lower is better) Translates to: NLDIHFEQQGNSWVEFNSNSLSL*TVSMLT Trigger: TGTAAGCATGGATACTGTGCATAAGGACAAACTATT...ACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAAGTGTATATCAAGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS GCA 90 bp | GGCGGCGCTCCCTCGCTAGCTCGCTTGCTCCGCGCTCTGCCGAGCTaGAGTCGACGTCTGTTCGCGTCCAAGGAACTTCTCAGTGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: GGAPSLARLLRALPS*SRRLFASKELLSGG Trigger: CCCGCCACTGAGAAGTTCCTTGGACGCGAACAGACGTCGACTGCAGCTCGGCAGAGCGCGGAGCAAGCGAGCTAGCGAGGGAGCGCCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CCA 90 bp | AGAGCTGGCGGCGCCGCAGGATCCCCTTTAGGTGGGCGAAGTCTGTaGGTGAGCCACGCTGCAGCTTCCCCTCGATTTGGCCCAGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: RAGGAAGSPLGGRSL*VSHAAASPRFGPGA Trigger: AGCGCCTGGGCCAAATCGAGGGGAAGCTGCAGCGTGGCTCACCCACAGACTTCGCCCACCTAAAGGGGATCCTGCGGCGCCGCCAGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CCA 90 bp | GCCGAGCTGCAGTCGACGTCTGTTCGCGTCCAAGGAACTTCTCAGTaGCGGGGAGCGCGGGGCAGCGTGCTCCTGACCTTGCTCTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: AELQSTSVRVQGTSQ*RGARGSVLLTLLSV Trigger: GACTGAGAGCAAGGTCAGGAGCACGCTGCCCCGCGCTCCCCGCCACTGAGAAGTTCCTTGGACGCGAACAGACGTCGACTGCAGCTCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CCA 90 bp | TGGGCGAAGTCTGTGGGTGAGCCACGCTGCAGCTTCCCCTCGATTTaGCCCAGGCGCTCGTTCAGGAAACCTGGGGAGTCAGCTAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: WAKSVGEPRCSFPSI*PRRSFRKPGESAKG Trigger: GCCCTTAGCTGACTCCCCAGGTTTCCTGAACGAGCGCCTGGGCCAAATCGAGGGGAAGCTGCAGCGTGGCTCACCCACAGACTTCGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS GCA 90 bp | CGCAGGATCCCCTTTAGGTGGGCGAAGTCTGTGGGTGAGCCACGCTaGAGCTTCCCCTCGATTTGGCCCAGGCGCTCGTTCAGGAAACCT | + |
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Preference number: 5 (lower is better) Translates to: RRIPFRWAKSVGEPR*SFPSIWPRRSFRKP Trigger: AGGTTTCCTGAACGAGCGCCTGGGCCAAATCGAGGGGAAGCTGCAGCGTGGCTCACCCACAGACTTCGCCCACCTAAAGGGGATCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGGAAGGATTGAAAAGCTATGAATATAGTGCTTGCAGAGACAACCGTGGCCCGTGCACCGTGCCGTaGGGGAAGATCTCCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: RKEGLKSYEYSACRDNRGPCTVP*GKISRW Trigger: CCACCTGGAGATCTTCCCCAACGGCACGGTGCACGG...GCCACGGTTGTCTCTGCAAGCACTATATTCATAGCTTTTCAATCCTTCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | AACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTATCTCCATGGCTGGGCCGATaGCGGCGCTGGTTGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NNKGTAGLSSTVSAFLLSPWLGR*RRWLCW Trigger: CCAGCACAACCAGCGCCGCAATCGGCCCAGCCATGG...AGATAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | AACCTTGATATACACTTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTCAGCTTCCCCTCGATTaGGCCCAGGCGCTCGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: NLDIHFEQQGNSWVEFNSQLPLD*AQALVQ Trigger: CTGAACGAGCGCCTGGGCCAAATCGAGGGGAAGCTG...ACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAAGTGTATATCAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | TTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTAAGCGTGCTCCTGACCTaGCTCTCAGTCAAAGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LNNKGTAGLSSTVSAFLLSVLLT*LSVKVP Trigger: AGGCACTTTGACTGAGAGCAAGGTCAGGAGCACGCT...TAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | CATTTATACCCATTGTCAAGGTATTTGAGTAAATTGTGGGGTAAGACACCCCTGAGGGGCTCCCATTCTTaGTTATGCTACCTCAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: HLYPLSRYLSKLWGKTPLRGSHS*LCYLRG Trigger: TCCCCTGAGGTAGCATAACAAAGAATGGGAGCCCCT...CAGGGGTGTCTTACCCCACAATTTACTCAAATACCTTGACAATGGGTATAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | CATTTATACCCATTGTCAAGGTATTTGAGTAAATTGTGGGGTAAGACACCCCTGAGGTATTTGAGTAAATaGTGGGGTAAGACACCCCTG | + |
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Preference number: 5 (lower is better) Translates to: HLYPLSRYLSKLWGKTPLRYLSK*WGKTPL Trigger: CAGGGGTGTCTTACCCCACAATTTACTCAAATACCT...CAGGGGTGTCTTACCCCACAATTTACTCAAATACCTTGACAATGGGTATAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | AACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTATCTTCTGTGGCAGATTCCTaGGCCTTTCATTTATACCCA | + |
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Preference number: 5 (lower is better) Translates to: NNKGTAGLSSTVSAFLLSSVADS*AFHLYP Trigger: TGGGTATAAATGAAAGGCCAAGGAATCTGCCACAGA...AGATAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | AACAAGGGAACAGCTGGGTTGAGTTCAACAGTAAGTGCTTTTCTGTTATCTAAAAATGTTTGTACAAGGTaGAGGCATAGGTGTTGTACC | + |
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Preference number: 5 (lower is better) Translates to: NKGTAGLSSTVSAFLLSKNVCTR*RHRCCT Trigger: GGTACAACACCTATGCCTCAACCTTGTACAAACATT...TTTAGATAACAGAAAAGCACTTACTGTTGAACTCAACCCAGCTGTTCCCTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS-3UTR CAA 90 bp | AACCTTGATATACACTTTGAACAACAAGGGAACAGCTGGGTTGAGTTCAACAGTACCTTGATATACACTTaGAACAACAAGGGAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: NLDIHFEQQGNSWVEFNSTLIYT*NNKGTA Trigger: AGCTGTTCCCTTGTTGTTCAAAGTGTATATCAAGGT...ACTGTTGAACTCAACCCAGCTGTTCCCTTGTTGTTCAAAGTGTATATCAAGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CCA 72 bp | CCCCCACCTCTGCCATGGCTGGGCCGATTGCGGCGCTaGTTGTGCTGGGCGCGCGCGGGCCGAGCCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PPPLPWLGRLRR*LCWARAGRAGA Trigger: GGCCCCGGCTCGGCCCGCGCGCGCCCAGCACAACCAGCGCCGCAATCGGCCCAGCCATGGCAGAGGTGGGGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CAA 72 bp | CGCGGGCGGTTCGGCGGCGCTCCCTCGCTAGCTCGCTaGCTCCGCGCTCTGCCGAGCTGCAGTCGACGTCTG | + |
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Preference number: 6 (lower is better) Translates to: RGRFGGAPSLAR*LRALPSCSRRL Trigger: CAGACGTCGACTGCAGCTCGGCAGAGCGCGGAGCAAGCGAGCTAGCGAGGGAGCGCCGCCGAACCGCCCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CCA 72 bp | CAGTCGACGTCTGTTCGCGTCCAAGGAACTTCTCAGTaGCGGGGAGCGCGGGGCAGCGTGCTCCTGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: QSTSVRVQGTSQ*RGARGSVLLTL Trigger: CAAGGTCAGGAGCACGCTGCCCCGCGCTCCCCGCCACTGAGAAGTTCCTTGGACGCGAACAGACGTCGACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CCA 72 bp | GGCGCCGCAGGATCCCCTTTAGGTGGGCGAAGTCTGTaGGTGAGCCACGCTGCAGCTTCCCCTCGATTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GAAGSPLGGRSL*VSHAAASPRFG Trigger: GCCAAATCGAGGGGAAGCTGCAGCGTGGCTCACCCACAGACTTCGCCCACCTAAAGGGGATCCTGCGGCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS GCA 72 bp | CCCTCGCTAGCTCGCTTGCTCCGCGCTCTGCCGAGCTaGAGTCGACGTCTGTTCGCGTCCAAGGAACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PSLARLLRALPS*SRRLFASKELL Trigger: GAGAAGTTCCTTGGACGCGAACAGACGTCGACTGCAGCTCGGCAGAGCGCGGAGCAAGCGAGCTAGCGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS GCA 72 bp | CCCTTTAGGTGGGCGAAGTCTGTGGGTGAGCCACGCTaGAGCTTCCCCTCGATTTGGCCCAGGCGCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: PFRWAKSVGEPR*SFPSIWPRRSF Trigger: GAACGAGCGCCTGGGCCAAATCGAGGGGAAGCTGCAGCGTGGCTCACCCACAGACTTCGCCCACCTAAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CCA 72 bp | TCTGTGGGTGAGCCACGCTGCAGCTTCCCCTCGATTTaGCCCAGGCGCTCGTTCAGGAAACCTGGGGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SVGEPRCSFPSI*PRRSFRKPGES Trigger: TGACTCCCCAGGTTTCCTGAACGAGCGCCTGGGCCAAATCGAGGGGAAGCTGCAGCGTGGCTCACCCACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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| CDS CAA 72 bp | AATACTGTCTCTCTGAGTCCGAATGTTTGTACAAGGTaGAGGCATAGGTGTTGTACCAGTTTTCTTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: NTVSLSPNVCTR*RHRCCTSFLQT Trigger: AGTTTGAAGAAAACTGGTACAACACCTATGCCTCAACCTTGTACAAACATTCGGACTCAGAGAGACAGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439435.3 |
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