RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGF14 (Homo sapiens)

Ensembl gene IDs: ENSG00000102466

Ensembl transcript IDs: ENST00000376131.8, ENST00000376143.5, ENST00000418923.2, ENST00000468052.1

Found 734 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTGCATTGCTGCTGCAGGAAAGAACACAACAGCCGTCTTGCCCATaGTCTGCTGAGTATGAGGGGAACGCAGCCAGAAACGGGGATGGC +
Preference number: 1 (lower is better)
Translates to: FALLLQERTQQPSCP*SAEYEGNAARNGDG
Trigger: GCCATCCCCGTTTCTGGCTGCGTTCCCCTCATACTCAGCAGAGCATGGGCAAGACGGCTGTTGTGTTCTTTCCTGCAGCAGCAATGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp CTAACGTTTGCATTGCTGCTGCAGGAAAGAACACAACAGCCGTCTTaGCCATGCTCTGCTGAGTATGAGGGGAACGCAGCCAGAAACGGG +
Preference number: 1 (lower is better)
Translates to: LTFALLLQERTQQPS*PCSAEYEGNAARNG
Trigger: CCCGTTTCTGGCTGCGTTCCCCTCATACTCAGCAGAGCATGGGCAAGACGGCTGTTGTGTTCTTTCCTGCAGCAGCAATGCAAACGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp CTGAGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTaGCAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACTGGAACTG +
Preference number: 1 (lower is better)
Translates to: LSSQAIQKQLKGGFG*QLGSTLSASAPLEL
Trigger: CAGTTCCAGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp GAGAGCTTCCCTGGATTGTGTTTGAGCCATTTCCCACCCAGGCAATaGCGACCTTGGGAGCACAGTATCTGCTACTGGACAGAGCGTATA +
Preference number: 1 (lower is better)
Translates to: ESFPGLCLSHFPPRQ*RPWEHSICYWTERI
Trigger: TATACGCTCTGTCCAGTAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCTGGGTGGGAAATGGCTCAAACACAATCCAGGGAAGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp CCTGGATTGTGTTTGAGCCATTTCCCACCCAGGCAATGCCGACCTTaGGAGCACAGTATCTGCTACTGGACAGAGCGTATATGTGTGTTT +
Preference number: 1 (lower is better)
Translates to: PGLCLSHFPPRQCRP*EHSICYWTERICVF
Trigger: AAACACACATATACGCTCTGTCCAGTAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCTGGGTGGGAAATGGCTCAAACACAATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp GAGAGCCATTATACCCGTTGTCTTTCTGGGCTCCTTGAGTTTATCTaGATTCCAACAGCACTTGGAAAGTACCGCCCTCCACTACCTCAA +
Preference number: 1 (lower is better)
Translates to: ESHYTRCLSGLLEFI*IPTALGKYRPPLPQ
Trigger: TTGAGGTAGTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAGCCCAGAAAGACAACGGGTATAATGGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp TTGCTCTATGCCACAGTTTGTTATAGAGCCAAGAGACACTCGTCATaGAATGCTTTAGGTGGCTGGACCAACAGGGCCAACCGTGAATAT +
Preference number: 1 (lower is better)
Translates to: LLYATVCYRAKRHSS*NALGGWTNRANREY
Trigger: ATATTCACGGTTGGCCCTGTTGGTCCAGCCACCTAAAGCATTGCATGACGAGTGTCTCTTGGCTCTATAACAAACTGTGGCATAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp CACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCTCAATATaGCTGTGCAGTCAGACCTGCAGGAAGAAACAGCTCATTTTTAAA +
Preference number: 1 (lower is better)
Translates to: HKIGLSLVFKLPRSI*LCSQTCRKKQLIFK
Trigger: TTTAAAAATGAGCTGTTTCTTCCTGCAGGTCTGACTGCACAGGCATATTGAGCGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp CCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTaGTCGCTGGGCAAGGCAAATGTTACCATTACCAGTAAGCTTGTG +
Preference number: 1 (lower is better)
Translates to: PTEIFGPTFSKTSGS*SLGKANVTITSKLV
Trigger: CACAAGCTTACTGGTAATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp TGGAGCGGGAGTCCTTTGGACCCATCGTGGATCTCTTTAAGCCACTaGTACCCAAAAACATTCAGGACAAGCAAACATTTAGAGCAAGAA +
Preference number: 1 (lower is better)
Translates to: WSGSPLDPSWISLSH*YPKTFRTSKHLEQE
Trigger: TTCTTGCTCTAAATGTTTGCTTGTCCTGAATGTTTTTGGGTAGCAGTGGCTTAAAGAGATCCACGATGGGTCCAAAGGACTCCCGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp TGTTATAGAGCCAAGAGACACTCGTCATGCAATGCTTTAGGTGGCTaGACCAACAGGGCCAACCGTGAATATGAAATATCTACCAAAGGC +
Preference number: 1 (lower is better)
Translates to: CYRAKRHSSCNALGG*TNRANREYEISTKG
Trigger: GCCTTTGGTAGATATTTCATATTCACGGTTGGCCCTGTTGGTCCAGCCACCTAAAGCATTGCATGACGAGTGTCTCTTGGCTCTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 90 bp AGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACTGGAACTGCCCTTaGTTCTCTATAGCTCATCACAAAACCTCAGGTATGTCTTATTTT +
Preference number: 1 (lower is better)
Translates to: SWAVLCQPQLHWNCP*FSIAHHKTSGMSYF
Trigger: AAAATAAGACATACCTGAGGTTTTGTGATGAGCTATAGAGAATCAAGGGCAGTTCCAGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 90 bp TGGAACCCTCTCCCTGTGTGCTTCCCATTTAAGAGAGGCACAATTTaGCCCATGTTATGGAAGAAAACAGCTAGAGCGTTCTACAGGAAA +
Preference number: 1 (lower is better)
Translates to: WNPLPVCFPFKRGTI*PMLWKKTARAFYRK
Trigger: TTTCCTGTAGAACGCTCTAGCTGTTTTCTTCCATAACATGGGTCAAATTGTGCCTCTCTTAAATGGGAAGCACACAGGGAGAGGGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp TATGGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGTaGGGCTGGATCAAGGGCAAAAACTGGTCATTAAGTCATCTGACA +
Preference number: 1 (lower is better)
Translates to: YGDNEDKHTGGRISE*GWIKGKNWSLSHLT
Trigger: TGTCAGATGACTTAATGACCAGTTTTTGCCCTTGATCCAGCCCCACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTCCCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp CCAACAGGGCCAACCGTGAATATGAAATATCTACCAAAGGCGAAGTaGGCATTTGGGAAAAAGCCCTCACAAAAGCCTCACATTATTCCT +
Preference number: 1 (lower is better)
Translates to: PTGPTVNMKYLPKAK*AFGKKPSQKPHIIP
Trigger: AGGAATAATGTGAGGCTTTTGTGAGGGCTTTTTCCCAAATGCCCACTTCGCCTTTGGTAGATATTTCATATTCACGGTTGGCCCTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp TCAGGTTCTTGTCATTGTGGGAAGTGCATTTGTTCTGCTGAAGAGTaGTATATTTCTGGGGAGTTCTGTGACTGTGATGACAGAGACTGC +
Preference number: 1 (lower is better)
Translates to: SGSCHCGKCICSAEE*YISGEFCDCDDRDC
Trigger: GCAGTCTCTGTCATCACAGTCACAGAACTCCCCAGAAATATACCACTCTTCAGCAGAACAAATGCACTTCCCACAATGACAAGAACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp GAGTGGTATATTTCTGGGGAGTTCTGTGACTGTGATGACAGAGACTaGGACAAACATGATGGTCTCATTTGTACAGGTGCAGTATTAACC +
Preference number: 1 (lower is better)
Translates to: EWYISGEFCDCDDRD*DKHDGLICTGAVLT
Trigger: GGTTAATACTGCACCTGTACAAATGAGACCATCATGTTTGTCGCAGTCTCTGTCATCACAGTCACAGAACTCCCCAGAAATATACCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp GATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCTGCTTGTTTaGCAAATCATCATCACTGAGGTATTCCACCCAGAGACTTTTTCA +
Preference number: 1 (lower is better)
Translates to: DAASLEKVLALTLLV*QIIITEVFHPETFS
Trigger: TGAAAAAGTCTCTGGGTGGAATACCTCAGTGATGATGATTTGCCAAACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp GGCTCATTCCTGTTTTTAGGAAGTTGCAGTGGGATTAATGTCAATTaGAAGGGATGCAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT +
Preference number: 1 (lower is better)
Translates to: GSFLFLGSCSGINVN*KGCSKFREGVGTNA
Trigger: AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTAATCCCACTGCAACTTCCTAAAAACAGGAATGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp CTGTTTTTAGGAAGTTGCAGTGGGATTAATGTCAATTGGAAGGGATaGAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCTGCTTGTTTG +
Preference number: 1 (lower is better)
Translates to: LFLGSCSGINVNWKG*SKFREGVGTNAACL
Trigger: CAAACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTAATCCCACTGCAACTTCCTAAAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp ATAAGAATCAACCCCATCCTGCTCTCATTGACATTTCAACCAGACTaGGCCATGGGACATTTGTTCAAGGCTAATTGCAACTGTCTAGAT +
Preference number: 1 (lower is better)
Translates to: IRINPILLSLTFQPD*AMGHLFKANCNCLD
Trigger: ATCTAGACAGTTGCAATTAGCCTTGAACAAATGTCCCATGGCCCAGTCTGGTTGAAATGTCAATGAGAGCAGGATGGGGTTGATTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp GACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGTGGGGCTaGATCAAGGGCAAAAACTGGTCATTAAGTCATCTGACATTAAAT +
Preference number: 1 (lower is better)
Translates to: DNEDKHTGGRISEWG*IKGKNWSLSHLTLN
Trigger: ATTTAATGTCAGATGACTTAATGACCAGTTTTTGCCCTTGATCCAGCCCCACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp CTTTCTGCCCATCCTTACTACGTAAGACTCTCTTCACGGATTACTTaGCCTGCCTCATGTTATGTCAAAGAGCCTTATGTTTTTCTGTAT +
Preference number: 1 (lower is better)
Translates to: LSAHPYYVRLSSRIT*PASCYVKEPYVFLY
Trigger: ATACAGAAAAACATAAGGCTCTTTGACATAACATGAGGCAGGCCAAGTAATCCGTGAAGAGAGTCTTACGTAGTAAGGATGGGCAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 90 bp CCACACCAGATATGCATGCAGAAGGAATGGAGTATTATAGAGACTTaGTACAATGGACATATGCACATGGAGGTACAAAACACACAGTCT +
Preference number: 1 (lower is better)
Translates to: PHQICMQKEWSIIET*YNGHMHMEVQNTQS
Trigger: AGACTGTGTGTTTTGTACCTCCATGTGCATATGTCCATTGTATCAAGTCTCTATAATACTCCATTCCTTCTGCATGCATATCTGGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp CATGATGGTCTCATTTGTACAGGTGCAGTATTAACCTTTTCTAATTaGTCTATGCCACAGTTTGTTATAGAGCCAAGAGACACTCGTCAT +
Preference number: 1 (lower is better)
Translates to: HDGLICTGAVLTFSN*SMPQFVIEPRDTRH
Trigger: ATGACGAGTGTCTCTTGGCTCTATAACAAACTGTGGCATAGAGCAATTAGAAAAGGTTAATACTGCACCTGTACAAATGAGACCATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 90 bp ATTGAACATTTTGCATGGAATCTTCATTGTGTAGTCAACTGTTCCTaGCCTTTCTTGGTAGTTGTCTTCCCTAAGCTCAAACAAACAGTG +
Preference number: 1 (lower is better)
Translates to: IEHFAWNLHCVVNCS*PFLVVVFPKLKQTV
Trigger: CACTGTTTGTTTGAGCTTAGGGAAGACAACTACCAAGAAAGGCCAGGAACAGTTGACTACACAATGAAGATTCCATGCAAAATGTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 90 bp AACACTAAGTATGGTGCCTTTCGAGGAAACTTCTCTGATAGTCAATaGAATACTCCATGTGGTCTTTGTTGGCAGATATATCACTATCCA +
Preference number: 1 (lower is better)
Translates to: NTKYGAFRGNFSDSQ*NTPCGLCWQIYHYP
Trigger: TGGATAGTGATATATCTGCCAACAAAGACCACATGGAGTATTTCATTGACTATCAGAGAAGTTTCCTCGAAAGGCACCATACTTAGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 90 bp GGAGATACATCACAGATAGGCAGATCACTAAAAAGAAGAGTGGATTaGATCAGAGTGAAGTCTTCAGTTAACTGTTTGTTTATTGCCTGT +
Preference number: 1 (lower is better)
Translates to: GDTSQIGRSLKRRVD*IRVKSSVNCLFIAC
Trigger: ACAGGCAATAAACAAACAGTTAACTGAAGACTTCACTCTGATTCAATCCACTCTTCTTTTTAGTGATCTGCCTATCTGTGATGTATCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 90 bp GGACATATGCACATGGAGGTACAAAACACACAGTCTAAATACAAATaGATTCCATCAGATTTACTATACGGAACATCAGTAGTGACAGAT +
Preference number: 1 (lower is better)
Translates to: GHMHMEVQNTQSKYK*IPSDLLYGTSVVTD
Trigger: ATCTGTCACTACTGATGTTCCGTATAGTAAATCTGATGGAATTCATTTGTATTTAGACTGTGTGTTTTGTACCTCCATGTGCATATGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 90 bp AAATGTTGTCACTTGAAATACCAAAACAACATTTCTGAGCGTTGTTaGGGGACTGGCAAAGCAATCAGCTACTATAACAAATCAGTAGAA +
Preference number: 1 (lower is better)
Translates to: KCCHLKYQNNISERC*GTGKAISYYNKSVE
Trigger: TTCTACTGATTTGTTATAGTAGCTGATTGCTTTGCCAGTCCCTCAACAACGCTCAGAAATGTTGTTTTGGTATTTCAAGTGACAACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 90 bp TCATTTGGGGATTTATTTGGCTTCAAGACTACACAATTATATCTTTaGCTTGACTACTTCAAGCTAGATCCAGATAATCACGTCCAATCT +
Preference number: 1 (lower is better)
Translates to: SFGDLFGFKTTQLYL*LDYFKLDPDNHVQS
Trigger: AGATTGGACGTGATTATCTGGATCTAGCTTGAAGTAGTCAAGGCAAAGATATAATTGTGTAGTCTTGAAGCCAAATAAATCCCCAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGTGGGTCTTGCTCGCTaGGCAAGGCAAATGTTACCA +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGVGLAR*ARQMLP
Trigger: TGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCAC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp AGGAAATTCCTCACCTTGATGAGACCACAAGGGAACCAGCATCCTTaGCAGACTGACCTGGGAGCAGCAGCTCACTGGGTCCTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: RKFLTLMRPQGNQHP*QTDLGAAAHWVLRN
Trigger: GTTTCTCAGGACCCAGTGAGCTGCTGCTCCCAGGTCAGTCTGCAAAGGATGCTGGTTCCCTTGTGGTCTCATCAAGGTGAGGAATTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp GCTAGGCTGGGTCTCAGGGGTGTGAGTGGGTCTTGGCCAGCTGAGTaGAACCATTTCTCACCTCTTGATAGTCATGCAGCCTACATCTGT +
Preference number: 2 (lower is better)
Translates to: ARLGLRGVSGSWPAE*NHFSPLDSHAAYIC
Trigger: ACAGATGTAGGCTGCATGACTATCAAGAGGTGAGAAATGGTTCAACTCAGCTGGCCAAGACCCACTCACACCCCTGAGACCCAGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGGGGGTGCAACAGGTTaGGATTTATCCACTTGCAAC +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGGGATG*DLSTCN
Trigger: GTTGCAAGTGGATAAATCTCAACCTGTTGCACCCCC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGCATCCTTTGCAGACTaGCCTGGGAGCAGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASASFAD*PGSSSS
Trigger: TGAGCTGCTGCTCCCAGGTCAGTCTGCAAAGGATGC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCTTTGCAGACTGACCTaGGAGCAGCAGCTCACTGGG +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLCRLT*EQQLTG
Trigger: CCCAGTGAGCTGCTGCTCCCAGGTCAGTCTGCAAAG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp CCCTGGATTGTGTTTGAGCCATTTCCCACCCAGGCAATGCCGACCTaGGGAGCACAGTATCTGCTACTGGACAGAGCGTATATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: PWIVFEPFPTQAMPT*GAQYLLLDRAYMCV
Trigger: AACACACATATACGCTCTGTCCAGTAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCTGGGTGGGAAATGGCTCAAACACAATCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGGCTTCCTGATTCCCTaGTTGCTCTCCGACCTAAGC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASGFLIP*LLSDLS
Trigger: GCTTAGGTCGGAGAGCAATCAGGGAATCAGGAAGCC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCCAAAACAACATTTCTaGGCGTTGTTGAGGGACTGG +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGPKQHF*ALLRDW
Trigger: CCAGTCCCTCAACAACGCTCAGAAATGTTGTTTTGG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCACTGGAACTGCCCTTaGTTCTCTATAGCTCATCAC +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGHWNCP*FSIAHH
Trigger: GTGATGAGCTATAGAGAATCAAGGGCAGTTCCAGTG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCTCCCACACCAGATATaGATGCAGAAGGAATGGAGT +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGLPHQI*MQKEWS
Trigger: ACTCCATTCCTTCTGCATGCATATCTGGTGTGGGAG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGGAGCGGGAGTCCTTTaGACCCATCGTGGATCTCTT +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASGAGVL*THRGSL
Trigger: AAGAGATCCACGATGGGTCCAAAGGACTCCCGCTCC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp ACTAGAGGGGGATGTCAAACACATATCATAGAGAGCTTCCCTGGATaGTGTTTGAGCCATTTCCCACCCAGGCAATGCCGACCTTGGGAG +
Preference number: 2 (lower is better)
Translates to: TRGGCQTHIIESFPG*CLSHFPPRQCRPWE
Trigger: CTCCCAAGGTCGGCATTGCCTGGGTGGGAAATGGCTCAAACACAATCCAGGGAAGCTCTCTATGATATGTGTTTGACATCCCCCTCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGGGTCTTGGCCAGCTaGGTTGAACCATTTCTCACC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASWVLAS*VEPFLT
Trigger: GGTGAGAAATGGTTCAACTCAGCTGGCCAAGACCCA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGGTGTCTTCTTGTTGTaGGGGGTGCAACAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASGVFLL*GVQQVE
Trigger: CTCAACCTGTTGCACCCCCCACAACAAGAAGACACC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGGGGGTGCAACAGGTTaGGATTTATCCACTTGCAAC +
Preference number: 2 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKGGATG*DLSTCN
Trigger: GTTGCAAGTGGATAAATCTCAACCTGTTGCACCCCC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTGTGTTTGTGTGAAGTaGAGTGTTGCTGCTGTAAGT +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGCVCVK*SVAAVS
Trigger: ACTTACAGCAGCAACACTTCACTTCACACAAACACA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGACACAACAGCCGTCTTaGCCATGCTCTGCTGAGTAT +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASTQQPS*PCSAEY
Trigger: ATACTCAGCAGAGCATGGGCAAGACGGCTGTTGTGT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAACTCAGCCTTAGTTTaGAGACTCAACTGTCAACAC +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGNSALV*RLNCQH
Trigger: GTGTTGACAGTTGAGTCTGCAAACTAAGGCTGAGTT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCACTCAAAAAGGATTATaGGTAGCTGTCAGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGTQKGL*VAVSRQ
Trigger: TTGCCTGCTGACAGCTACCCATAATCCTTTTTGAGT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCTCCTTGAGTTTATCTaGATTCCAACAGCACTTGGA +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGLLEFI*IPTALG
Trigger: TCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGATGCAATGCTTTAGGTaGCTGGACCAACAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASMQCFR*LDQQGQ
Trigger: TTGGCCCTGTTGGTCCAGCCACCTAAAGCATTGCAT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAGCCACTGGGCAACATaGGCCCCAGATGCTGAGCTA +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNSHWAT*APDAEL
Trigger: TAGCTCAGCATCTGGGGCTCATGTTGCCCAGTGGCT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGCAAATCATCATCACTaGGGTATTCCACCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASANHHH*GIPPRD
Trigger: GTCTCTGGGTGGAATACCTCAGTGATGATGATTTGC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCAGCCGTCTTGCCCATaGTCTGCTGAGTATGAGGGG +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANQPSCP*SAEYEG
Trigger: CCCCTCATACTCAGCAGAGCATGGGCAAGACGGCTG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCGTTTGCATTGCTGCTaGAGGAAAGAACACAACAGC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASRLHCC*RKEHNS
Trigger: GCTGTTGTGTTCTTTCCTGCAGCAGCAATGCAAACG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCTCCCACACCAGATATaGATGCAGAAGGAATGGAGT +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLPHQI*MQKEWS
Trigger: ACTCCATTCCTTCTGCATGCATATCTGGTGTGGGAG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGGTAGGAAGGTATGCTaGAGACATTTGGTGGGTAGA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASGRKVC*RHLVGR
Trigger: TCTACCCACCAAATGTCTGCAGCATACCTTCCTACC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGATTAGCCACCCAATATaGAGGTGTGCTCCTACTCCA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASISHPI*RCAPTP
Trigger: TGGAGTAGGAGCACACCTGCATATTGGGTGGCTAAT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCATGGACATATGCACATaGAGGTACAAAACACACAGT +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGMDICT*RYKTHS
Trigger: ACTGTGTGTTTTGTACCTCCATGTGCATATGTCCAT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGCGTTGTTGAGGGACTaGCAAAGCAATCAGCTACTA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASALLRD*QSNQLL
Trigger: TAGTAGCTGATTGCTTTGCCAGTCCCTCAACAACGC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGACCATGTACATCCTaGATTTTGATATGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGRPCTS*ILICLH
Trigger: ATGCAGGCATATCAAAATCCAGGATGTACATGGTCT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGGTAGAATATCAGAGTaGGGCTGGATCAAGGGCAAA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASGRISE*GWIKGK
Trigger: TTTGCCCTTGATCCAGCCCCACTCTGATATTCTACC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp AGTCATAAGAGGAGAGCCATTATACCCGTTGTCTTTCTGGGCTCCTaGAGTTTATCTGGATTCCAACAGCACTTGGAAAGTACCGCCCTC +
Preference number: 2 (lower is better)
Translates to: SHKRRAIIPVVFLGS*SLSGFQQHLESTAL
Trigger: GAGGGCGGTACTTTCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAGCCCAGAAAGACAACGGGTATAATGGCTCTCCTCTTATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGTGTATGTGTGGTTTTaGTGCCAGCAATGCAAACAC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASVYVWF*CQQCKH
Trigger: GTGTTTGCATTGCTGGCATCAAAACCACACATACAC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTTAATATGGGGACAATaGAGACAAGCACACAGGAGG +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLIWGQ*RQAHRR
Trigger: CCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGTGGAAACTGTGAATaGTGGGATGGATGGAATGGA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASCGNCE*WDGWNG
Trigger: TCCATTCCATCCATCCCAGCATTCACAGTTTCCACA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGTGATGACAGAGACTaGGACAAACATGATGGTCTC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASCDDRD*DKHDGL
Trigger: GAGACCATCATGTTTGTCGCAGTCTCTGTCATCACA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGGTGTCTTCTTGTTGTaGGGGGTGCAACAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLGVFLL*GVQQVE
Trigger: CTCAACCTGTTGCACCCCCCACAACAAGAAGACACC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGGATACCTTACTTACTaGAAACCTGGGGTCATGCAA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASGYLTY*KPGVMQ
Trigger: TTGCATGACCCCAGGTTTCCAGTAAGTAAGGTATCC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGCTGCAGACATTTGGTaGGTAGAGGCCAGGGATGCT +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNAADIW*VEARDA
Trigger: AGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp CCAACAGTTCTTGATACACAGGTACCTACTACATGCAGCTCATCATaGCTGTCCTCTTCCCATGCTACAGGTGAGACCAGACACAAAGTA +
Preference number: 2 (lower is better)
Translates to: PTVLDTQVPTTCSSS*LSSSHATGETRHKV
Trigger: TACTTTGTGTCTGGTCTCACCTGTAGCATGGGAAGAGGACAGCAATGATGAGCTGCATGTAGTAGGTACCTGTGTATCAAGAACTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp GTTGTCTTTCTGGGCTCCTTGAGTTTATCTGGATTCCAACAGCACTaGGAAAGTACCGCCCTCCACTACCTCAAATGCAAACACAATCTC +
Preference number: 2 (lower is better)
Translates to: VVFLGSLSLSGFQQH*ESTALHYLKCKHNL
Trigger: GAGATTGTGTTTGCATTTGAGGTAGTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAGCCCAGAAAGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp CAGCTGGGCAGTACTTTGTCAGCCTCAGCTCCACTGGAACTGCCCTaGATTCTCTATAGCTCATCACAAAACCTCAGGTATGTCTTATTT +
Preference number: 2 (lower is better)
Translates to: QLGSTLSASAPLELP*ILYSSSQNLRYVLF
Trigger: AAATAAGACATACCTGAGGTTTTGTGATGAGCTATAGAGAATCAAGGGCAGTTCCAGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGACGGATTACTTGGCCTaGCTCATGTTATGTCAAAGA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASTDYLA*LMLCQR
Trigger: TCTTTGACATAACATGAGGCAGGCCAAGTAATCCGT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAGGCAATGCCGACCTTaGGAGCACAGTATCTGCTAC +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGRQCRP*EHSICY
Trigger: GTAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCATAAGCAAATCTCATTaGCTCATTCCTGTTTTTAGG +
Preference number: 2 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGISKSH*LIPVFR
Trigger: CCTAAAAACAGGAATGAGCCAATGAGATTTGCTTAT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGACACATAGATTTCGCTaGAACAGGACTCAAAAAGGA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASTHRFR*NRTQKG
Trigger: TCCTTTTTGAGTCCTGTTTCAGCGAAATCTATGTGT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGACTTTGGGAGTAATTTaGGCTATCCCAGTTTATGAC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASTLGVI*AIPVYD
Trigger: GTCATAAACTGGGATAGCTCAAATTACTCCCAAAGT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAAGAGAGGCACAATTTaGCCCATGTTATGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASKRGTI*PMLWKK
Trigger: TTTCTTCCATAACATGGGTCAAATTGTGCCTCTCTT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCCTGAGATTAAGGAGTaGAACCATGTTGTAGTTCTA +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASPEIKE*NHVVVL
Trigger: TAGAACTACAACATGGTTGCACTCCTTAATCTCAGG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAGGCAATGCCGACCTTaGGAGCACAGTATCTGCTAC +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDRQCRP*EHSICY
Trigger: GTAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGTGGGTCTTGCTCGCTaGGCAAGGCAAATGTTACCA +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDVGLAR*ARQMLP
Trigger: TGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCAC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGCCTACAGAAATCTTTaGACCCACTTTCTCAAAAAC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASAYRNL*THFLKN
Trigger: GTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGGGATTAATGTCAATTaGAAGGGATGCAGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASGINVN*KGCSKF
Trigger: AAACTTGCTGCATCCCTTCCAATTGACATTAATCCC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGATTTGGCTGGCAGCTaGGCAGTACTTTGTCAGCCT +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDDLAGS*AVLCQP
Trigger: AGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAATACAAATGACCTTTaGATTTCTCTATCACGGCGC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASNTNDL*ISLSRR
Trigger: GCGCCGTGATAGAGAAATCCAAAGGTCATTTGTATT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTATGCTGCAGACATTTaGTGGGTAGAGGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNYAADI*WVEARD
Trigger: ATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAGAGGCATGTACTGGTaGAATACACAGTACCGGACT +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGRGMYW*NTQYRT
Trigger: AGTCCGGTACTGTGTATTTCACCAGTACATGCCTCT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAGCCACTGGGCAACATaGGCCCCAGATGCTGAGCTA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWSHWAT*APDAEL
Trigger: TAGCTCAGCATCTGGGGCTCATGTTGCCCAGTGGCT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCAACAGACTGTATTCTaGGATCATGGCAAGGCACCT +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNQQTVF*DHGKAP
Trigger: AGGTGCCTTGCCATGATCTCAGAATACAGTCTGTTG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCAACAGACTGTATTCTaGGATCATGGCAAGGCACCT +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANQQTVF*DHGKAP
Trigger: AGGTGCCTTGCCATGATCTCAGAATACAGTCTGTTG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCCAAAACAACATTTCTaGGCGTTGTTGAGGGACTGG +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNPKQHF*ALLRDW
Trigger: CCAGTCCCTCAACAACGCTCAGAAATGTTGTTTTGG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAAGAAACCTCAGCTATaGCTACTATTTCACTCAAAG +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASKKPQL*LLFHSK
Trigger: CTTTGAGTGAAATAGTAGTCATAGCTGAGGTTTCTT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGCAAATCATCATCACTaGGGTATTCCACCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNANHHH*GIPPRD
Trigger: GTCTCTGGGTGGAATACCTCAGTGATGATGATTTGC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTGGGAGCACAGTATCTaGTACTGGACAGAGCGTATA +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANWEHSI*YWTERI
Trigger: TATACGCTCTGTCCAGTAGCAGATACTGTGCTCCCA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTGGGAGCACAGTATCTaGTACTGGACAGAGCGTATA +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNWEHSI*YWTERI
Trigger: TATACGCTCTGTCCAGTAGCAGATACTGTGCTCCCA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAAAACCAGTGGGTCTTaGTCGCTGGGCAAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDKTSGS*SLGKAN
Trigger: ATTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCAGGTACCTACTACATaGAGCTCATCATTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANQVPTT*SSSLLS
Trigger: GGACAGCAATGATGAGCTGCATGTAGTAGGTACCTG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGGTAGGAAGGTATGCTaGAGACATTTGGTGGGTAGA +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGGRKVC*RHLVGR
Trigger: TCTACCCACCAAATGTCTGCAGCATACCTTCCTACC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTTTCTCAAAAACCAGTaGGTCTTGCTCGCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANFLKNQ*VLLAGQ
Trigger: TTGCCCAGCGAGCAAGACCCACTGGTTTTTGAGAAA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGGGGAAAATGATGACTaGGTCATCCTCCCACATAGA +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANGENDD*VILPHR
Trigger: TCTATGTGGGAGGATGACCCAGTCATCATTTTCCCC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCCTTTGGACCCATCGTaGATCTCTTTAAGCCACTGC +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDPLDPS*ISLSHC
Trigger: GCAGTGGCTTAAAGAGATCCACGATGGGTCCAAAGG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGATTCCAACAGCACTTaGAAAGTACCGCCCTCCACT +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDDSNST*KVPPST
Trigger: AGTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAATACTGTGATAAAATaGCACCAATCTCAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASNTVIK*HQSQKL
Trigger: GAGCTTCTGAGATTGGTGCCATTTTATCACAGTATT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGATATCAGAGTGGGGCTaGATCAAGGGCAAAAACTGG +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGISEWG*IKGKNW
Trigger: CCAGTTTTTGCCCTTGATCCAGCCCCACTCTGATAT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGATGAAAGTTTTTGCCTaGAGATACATCACAGATAGG +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASMKVFA*RYITDR
Trigger: CCTATCTGTGATGTATCTCCAGGCAAAAACTTTCAT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp GGATTAATGTCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTaGGCACTAACGCTGCTTGTTTGGCAAATCATCATCACTGAGGTA +
Preference number: 2 (lower is better)
Translates to: GLMSIGRDAASLEKV*ALTLLVWQIIITEV
Trigger: TACCTCAGTGATGATGATTTGCCAAACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTCCCTGGATTGTGTTTaGGCCATTTCCCACCCAGGC +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWSLDCV*AISHPG
Trigger: GCCTGGGTGGGAAATGGCTCAAACACAATCCAGGGA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTTCCCATGCTACAGGTaGGACCAGACACAAAGTAAA +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANFPCYR*DQTQSK
Trigger: TTTACTTTGTGTCTGGTCTCACCTGTAGCATGGGAA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCCAGTCGCTTTCCCTTaGTATAGCCTTGTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNPVAFP*YSLVLN
Trigger: ATTCAGAACAAGGCTATATCAAGGGAAAGCGACTGG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCGTTTGCATTGCTGCTaGAGGAAAGAACACAACAGC +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDRLHCC*RKEHNS
Trigger: GCTGTTGTGTTCTTTCCTGCAGCAGCAATGCAAACG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCTGTTTTTAGGAAGTTaGAGTGGGATTAATGTCAAT +
Preference number: 2 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLFLGS*SGINVN
Trigger: ATTGACATTAATCCCACTGCAACTTCCTAAAAACAG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGGAACCAGCATCCTTTaGAGACTGACCTGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWGTSIL*RLTWEQ
Trigger: CTGCTCCCAGGTCAGTCTGCAAAGGATGCTGGTTCC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTGTATTCTGAGATCATaGCAAGGCACCTCTAACCCA +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANCILRS*QGTSNP
Trigger: TGGGTTAGAGGTGCCTTGCCATGATCTCAGAATACA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTCTTCACGGATTACTTaGCCTGCCTCATGTTATGTC +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNSSRIT*PASCYV
Trigger: GACATAACATGAGGCAGGCCAAGTAATCCGTGAAGA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp CCCACACCAGATATGCATGCAGAAGGAATGGAGTATTATAGAGACTaGATACAATGGACATATGCACATGGAGGTACAAAACACACAGTC +
Preference number: 2 (lower is better)
Translates to: PTPDMHAEGMEYYRD*IQWTYAHGGTKHTV
Trigger: GACTGTGTGTTTTGTACCTCCATGTGCATATGTCCATTGTATCAAGTCTCTATAATACTCCATTCCTTCTGCATGCATATCTGGTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp CAATTTTTCCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTaGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTGCAGACATT +
Preference number: 2 (lower is better)
Translates to: QFFHPKVIWQHLQTI*IVTLGRVGRYAADI
Trigger: AATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGGAAAAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCCAGTCGCTTTCCCTTaGTATAGCCTTGTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDPVAFP*YSLVLN
Trigger: ATTCAGAACAAGGCTATATCAAGGGAAAGCGACTGG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGATGATAAAGAACTTCTaGTTGCTCCCCAAGAGGCAA +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGMIKNF*LLPKRQ
Trigger: TTGCCTCTTGGGGAGCAAGCAGAAGTTCTTTATCAT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCTCCACTACCTCAAATaGAAACACAATCTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDLHYLK*KHNLCQ
Trigger: CTGGCAGAGATTGTGTTTGCATTTGAGGTAGTGGAG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGTAGTCAACTGTTCCTaGCCTTTCTTGGTAGTTGTC +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDVVNCS*PFLVVV
Trigger: GACAACTACCAAGAAAGGCCAGGAACAGTTGACTAC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAATGCTTTAGGTGGCTaGACCAACAGGGCCAACCGT +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWNALGG*TNRANR
Trigger: ACGGTTGGCCCTGTTGGTCCAGCCACCTAAAGCATT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGGTGTGAGTGGGTCTTaGCCAGCTGAGTTGAACCAT +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWGVSGS*PAELNH
Trigger: ATGGTTCAACTCAGCTGGCCAAGACCCACTCACACC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCAACTGTCAACACTTTaGAACCCTACTCCATATTCA +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNQLSTL*NPTPYS
Trigger: TGAATATGGAGTAGGGTTTCAAAGTGTTGACAGTTG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAGCTATCCCAGTTTATaGCAGAGGGTCCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWSYPSL*QRVLRM
Trigger: CATCCTCAGGACCCTCTGTCATAAACTGGGATAGCT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGAGGAACAAAATCCCTaGAAAAGGTCACAGACAGTG +
Preference number: 2 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQEEQNP*KRSQTV
Trigger: CACTGTCTGTGACCTTTTGCAGGGATTTTGTTCCTC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGACACAACAGCCGTCTTaGCCATGCTCTGCTGAGTAT +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWTQQPS*PCSAEY
Trigger: ATACTCAGCAGAGCATGGGCAAGACGGCTGTTGTGT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGATCTCTTTAAGCCACTaGTACCCAAAAACATTCAGG +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGISLSH*YPKTFR
Trigger: CCTGAATGTTTTTGGGTAGCAGTGGCTTAAAGAGAT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACATCTCTTTAAGCCACTaGTACCCAAAAACATTCAGG +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNISLSH*YPKTFR
Trigger: CCTGAATGTTTTTGGGTAGCAGTGGCTTAAAGAGAT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAACACAGTATCTGCTACTaGACAGAGCGTATATGTGTG +
Preference number: 2 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQHSICY*TERICV
Trigger: CACACATATACGCTCTGTCCAGTAGCAGATACTGTG...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGATGGACATATGCACATaGAGGTACAAAACACACAGT +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGMDICT*RYKTHS
Trigger: ACTGTGTGTTTTGTACCTCCATGTGCATATGTCCAT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGCTCTTTACATAGGGTaGAGAATTGTCATGTCTTCT +
Preference number: 2 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNALYIG*RIVMSS
Trigger: AGAAGACATGACAATTCTCCACCCTATGTAAAGAGC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAGACCATGTACATCCTaGATTTTGATATGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGRPCTS*ILICLH
Trigger: ATGCAGGCATATCAAAATCCAGGATGTACATGGTCT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGGGATTAATGTCAATTaGAAGGGATGCAGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: VYVCVCVCMCGFDASNANGINVN*KGCSKF
Trigger: AAACTTGCTGCATCCCTTCCAATTGACATTAATCCC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTATGCTGCAGACATTTaGTGGGTAGAGGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWYAADI*WVEARD
Trigger: ATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGTACATCCTGGATTTTaGTATGCCTGCATTTTGGAA +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDVHPGF*YACILE
Trigger: TTCCAAAATGCAGGCATATCAAAATCCAGGATGTAC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCACTGGAACTGCCCTTaGTTCTCTATAGCTCATCAC +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWHWNCP*FSIAHH
Trigger: GTGATGAGCTATAGAGAATCAAGGGCAGTTCCAGTG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCTTCATAGGGATAAATaGCCTTATAGACACCCCATA +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDLHRDK*PYRHPI
Trigger: TATGGGGTGTCTATAAGGGCATTTATCCCTATGAAG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCACACCAGATATGCATaGAGAAGGAATGGAGTATTA +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDHTRYA*RRNGVL
Trigger: TAATACTCCATTCCTTCTGCATGCATATCTGGTGTG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAACTCAAAAAGGATTATaGGTAGCTGTCAGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQTQKGL*VAVSRQ
Trigger: TTGCCTGCTGACAGCTACCCATAATCCTTTTTGAGT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGCCTACAGAAATCTTTaGACCCACTTTCTCAAAAAC +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDAYRNL*THFLKN
Trigger: GTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGATATCAGAGTGGGGCTaGATCAAGGGCAAAAACTGG +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWISEWG*IKGKNW
Trigger: CCAGTTTTTGCCCTTGATCCAGCCCCACTCTGATAT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGGGCAAGGGCTGTCATaGAGAAGATTTATGAAAGCA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWGQGLS*RRFMKA
Trigger: TGCTTTCATAAATCTTCTTCATGACAGCCCTTGCCC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGTCCATAAGCCCATTTaGCTGTATTACAAGTTAGTT +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDVHKPI*LYYKLV
Trigger: AACTAACTTGTAATACAGTCAAATGGGCTTATGGAC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTTCCCATGCTACAGGTaGGACCAGACACAAAGTAAA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWFPCYR*DQTQSK
Trigger: TTTACTTTGTGTCTGGTCTCACCTGTAGCATGGGAA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAAGAAACCTCAGCTATaGCTACTATTTCACTCAAAG +
Preference number: 2 (lower is better)
Translates to: SITALILLLRIRKLNFTDKKPQL*LLFHSK
Trigger: CTTTGAGTGAAATAGTAGTCATAGCTGAGGTTTCTT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAGACTGCGACAAACATaGTGGTCTCATTTGTACAGG +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWRLRQT*WSHLYR
Trigger: CCTGTACAAATGAGACCATCATGTTTGTCGCAGTCT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAAACACAAACTACAATaGAGACAGACAAACTCTTTG +
Preference number: 2 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGKHKLQ*RQTNSL
Trigger: CAAAGAGTTTGTCTGTCTGCATTGTAGTTTGTGTTT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGTAGTCAACTGTTCCTaGCCTTTCTTGGTAGTTGTC +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWVVNCS*PFLVVV
Trigger: GACAACTACCAAGAAAGGCCAGGAACAGTTGACTAC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGGATACCTTACTTACTaGAAACCTGGGGTCATGCAA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWGYLTY*KPGVMQ
Trigger: TTGCATGACCCCAGGTTTCCAGTAAGTAAGGTATCC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAACTCAGCCTTAGTTTaGAGACTCAACTGTCAACAC +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWNSALV*RLNCQH
Trigger: GTGTTGACAGTTGAGTCTGCAAACTAAGGCTGAGTT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCTCCTTGAGTTTATCTaGATTCCAACAGCACTTGGA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWLLEFI*IPTALG
Trigger: TCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTGTTCTGCTGAAGAGTaGTATATTTCTGGGGAGTTC +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWCSAEE*YISGEF
Trigger: GAACTCCCCAGAAATATACCACTCTTCAGCAGAACA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAGGTTCTTGTCATTGTaGGAAGTGCATTTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWRFLSL*EVHLFC
Trigger: GCAGAACAAATGCACTTCCCACAATGACAAGAACCT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 90 bp ACTTTGAGAAGTGTGTCAAGAAATGGCAAACATTTAATTTGGACTTaGGGGATTTTTGCAGCTGAAATGCATATACCAGTTTCCCTGATA +
Preference number: 2 (lower is better)
Translates to: TLRSVSRNGKHLIWT*GIFAAEMHIPVSLI
Trigger: TATCAGGGAAACTGGTATATGCATTTCAGCTGCAAAAATCCCCAAAGTCCAAATTAAATGTTTGCCATTTCTTGACACACTTCTCAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGACACATAGATTTCGCTaGAACAGGACTCAAAAAGGA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWTHRFR*NRTQKG
Trigger: TCCTTTTTGAGTCCTGTTTCAGCGAAATCTATGTGT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGTACATCCTGGATTTTaGTATGCCTGCATTTTGGAA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWVHPGF*YACILE
Trigger: TTCCAAAATGCAGGCATATCAAAATCCAGGATGTAC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGACTGCACTCTTACTTTaGGAAGTGTGTCAAGAAATG +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWTALLL*EVCQEM
Trigger: CATTTCTTGACACACTTCTCAAAGTAAGAGTGCAGT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGGTAAAGGGGGAAATTaGGTTTACCAACTTATTTAC +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWGKGGN*VYQLIY
Trigger: GTAAATAAGTTGGTAAACTCAATTTCCCCCTTTACC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTCCTTAACAATTACATaGGAGAGGTCTGGATTCTTA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWSLTIT*ERSGFL
Trigger: TAAGAATCCAGACCTCTCTCATGTAATTGTTAAGGA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTCTACCAAGGATGAATaGAATGATTTCATTGTGGAC +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWSTKDE*NDFIVD
Trigger: GTCCACAATGAAATCATTTCATTCATCCTTGGTAGA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAGAAGCACTAATGATTaGTTCTTGCCCCTTTTCAAT +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWRSTND*FLPLFN
Trigger: ATTGAAAAGGGGCAAGAATCAATCATTAGTGCTTCT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGATACAATGGACATATaGACATGGAGGTACAAAACA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWDTMDI*TWRYKT
Trigger: TGTTTTGTACCTCCATGTGCATATGTCCATTGTATC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGATCAAGGGCAAAAACTaGTCATTAAGTCATCTGACA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWIKGKN*SLSHLT
Trigger: TGTCAGATGACTTAATGACCAGTTTTTGCCCTTGAT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAATGGAAGTCATGTTTaGAAAGAACAACCAACCCAA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWNGSHV*KEQPTQ
Trigger: TTGGGTTGGTTGTTCTTTCCAAACATGACTTCCATT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGATAAGCAAATCTCATTaGCTCATTCCTGTTTTTAGG +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWISKSH*LIPVFR
Trigger: CCTAAAAACAGGAATGAGCCAATGAGATTTGCTTAT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGATGAAATACTCCATGTaGTCTTTGTTGGCAGATATA +
Preference number: 2 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWMKYSM*SLLADI
Trigger: TATATCTGCCAACAAAGACCACATGGAGTATTTCAT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp CTGGGTCGGGTAGGAAGGTATGCTGCAGACATTTGGTaGGTAGAGGCCAGGGATGCTGCTGAGCATCCCGCA +
Preference number: 3 (lower is better)
Translates to: LGRVGRYAADIW*VEARDAAEHPA
Trigger: TGCGGGATGCTCAGCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACCCGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp GCATTGCTGCTGCAGGAAAGAACACAACAGCCGTCTTaGCCATGCTCTGCTGAGTATGAGGGGAACGCAGCC +
Preference number: 3 (lower is better)
Translates to: ALLLQERTQQPS*PCSAEYEGNAA
Trigger: GGCTGCGTTCCCCTCATACTCAGCAGAGCATGGGCAAGACGGCTGTTGTGTTCTTTCCTGCAGCAGCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp CTGCTGCAGGAAAGAACACAACAGCCGTCTTGCCCATaGTCTGCTGAGTATGAGGGGAACGCAGCCAGAAAC +
Preference number: 3 (lower is better)
Translates to: LLQERTQQPSCP*SAEYEGNAARN
Trigger: GTTTCTGGCTGCGTTCCCCTCATACTCAGCAGAGCATGGGCAAGACGGCTGTTGTGTTCTTTCCTGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp CTGGCTAGGCTGGGTCTCAGGGGTGTGAGTGGGTCTTaGCCAGCTGAGTTGAACCATTTCTCACCTCTTGAT +
Preference number: 3 (lower is better)
Translates to: LARLGLRGVSGS*PAELNHFSPLD
Trigger: ATCAAGAGGTGAGAAATGGTTCAACTCAGCTGGCCAAGACCCACTCACACCCCTGAGACCCAGCCTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAAAAACCAGTGGGTCTaGCTCGCTGGGCAAGGCAAA +
Preference number: 3 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGKNQWV*LAGQGK
Trigger: TTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp CCTGGATTGTGTTTGAGCCATTTCCCACCCAGGCAATaGCGACCTTGGGAGCACAGTATCTGCTACTGGACA +
Preference number: 3 (lower is better)
Translates to: PGLCLSHFPPRQ*RPWEHSICYWT
Trigger: TGTCCAGTAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCTGGGTGGGAAATGGCTCAAACACAATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp TTTGATTGTCACACTGGGTCGGGTAGGAAGGTATGCTaGAGACATTTGGTGGGTAGAGGCCAGGGATGCTGC +
Preference number: 3 (lower is better)
Translates to: FDCHTGSGRKVC*RHLVGRGQGCC
Trigger: GCAGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATACCTTCCTACCCGACCCAGTGTGACAATCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCAGCTGGGCAGTACTTaGTCAGCCTCAGCTCCACTG +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASQLGST*SASAPL
Trigger: CAGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp TGTTTGAGCCATTTCCCACCCAGGCAATGCCGACCTTaGGAGCACAGTATCTGCTACTGGACAGAGCGTATA +
Preference number: 3 (lower is better)
Translates to: CLSHFPPRQCRP*EHSICYWTERI
Trigger: TATACGCTCTGTCCAGTAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCTGGGTGGGAAATGGCTCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCAGGCAATGCCGACCTaGGGAGCACAGTATCTGCTA +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASQAMPT*GAQYLL
Trigger: TAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCTG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTTTAGAGAAGGTGTaGGCACTAACGCTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGSLEKV*ALTLLV
Trigger: AACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp GCCACAGTTTGTTATAGAGCCAAGAGACACTCGTCATaGAATGCTTTAGGTGGCTGGACCAACAGGGCCAAC +
Preference number: 3 (lower is better)
Translates to: ATVCYRAKRHSS*NALGGWTNRAN
Trigger: GTTGGCCCTGTTGGTCCAGCCACCTAAAGCATTGCATGACGAGTGTCTCTTGGCTCTATAACAAACTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGAGAGCTTCCCTGGATaGTGTTTGAGCCATTTCCCA +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASESFPG*CLSHFP
Trigger: TGGGAAATGGCTCAAACACAATCCAGGGAAGCTCTC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGACATGCAGCTCATCATaGCTGTCCTCTTCCCATGCT +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASTCSSS*LSSSHA
Trigger: AGCATGGGAAGAGGACAGCAATGATGAGCTGCATGT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCACATACCAACAGTTCTaGATACACAGGTACCTACTA +
Preference number: 3 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGTYQQF*IHRYLL
Trigger: TAGTAGGTACCTGTGTATCAAGAACTGTTGGTATGT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTGGAGCGGGAGTCCTTaGGACCCATCGTGGATCTCT +
Preference number: 3 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGWSGSP*DPSWIS
Trigger: AGAGATCCACGATGGGTCCAAAGGACTCCCGCTCCA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTGTACATCCTGGATTTaGATATGCCTGCATTTTGGA +
Preference number: 3 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGCTSWI*ICLHFG
Trigger: TCCAAAATGCAGGCATATCAAAATCCAGGATGTACA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTCAACTGTCAACACTTaGAAACCCTACTCCATATTC +
Preference number: 3 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGSTVNT*KPYSIF
Trigger: GAATATGGAGTAGGGTTTCAAAGTGTTGACAGTTGA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGGGCCATGGGACATTaGTTCAAGGCTAATTGCAAC +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASWAMGH*FKANCN
Trigger: GTTGCAATTAGCCTTGAACAAATGTCCCATGGCCCA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 72 bp TCTCACCTCTTGATAGTCATGCAGCCTACATCTGTCTaGTGGAACCCTCTCCCTGTGTGCTTCCCATTTAAG +
Preference number: 3 (lower is better)
Translates to: SHLLIVMQPTSV*WNPLPVCFPFK
Trigger: CTTAAATGGGAAGCACACAGGGAGAGGGTTCCATCAGACAGATGTAGGCTGCATGACTATCAAGAGGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp AGGGGGATGTCAAACACATATCATAGAGAGCTTCCCTaGATTGTGTTTGAGCCATTTCCCACCCAGGCAATG +
Preference number: 3 (lower is better)
Translates to: RGMSNTYHRELP*IVFEPFPTQAM
Trigger: CATTGCCTGGGTGGGAAATGGCTCAAACACAATCCAGGGAAGCTCTCTATGATATGTGTTTGACATCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp GACCCACTTTCTCAAAAACCAGTGGGTCTTGCTCGCTaGGCAAGGCAAATGTTACCATTACCAGTAAGCTTG +
Preference number: 3 (lower is better)
Translates to: DPLSQKPVGLAR*ARQMLPLPVSL
Trigger: CAAGCTTACTGGTAATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTTGAGAAAGTGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp TATACCCGTTGTCTTTCTGGGCTCCTTGAGTTTATCTaGATTCCAACAGCACTTGGAAAGTACCGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: YTRCLSGLLEFI*IPTALGKYRPP
Trigger: TGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAGCCCAGAAAGACAACGGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp GCCAAGAGACACTCGTCATGCAATGCTTTAGGTGGCTaGACCAACAGGGCCAACCGTGAATATGAAATATCT +
Preference number: 3 (lower is better)
Translates to: AKRHSSCNALGG*TNRANREYEIS
Trigger: AGATATTTCATATTCACGGTTGGCCCTGTTGGTCCAGCCACCTAAAGCATTGCATGACGAGTGTCTCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGGATTCCAACAGCACTaGGAAAGTACCGCCCTCCAC +
Preference number: 3 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGGFQQH*ESTALH
Trigger: GTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATCC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAAAAACCAGTGGGTCTaGCTCGCTGGGCAAGGCAAA +
Preference number: 3 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNKNQWV*LAGQGK
Trigger: TTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGGATTCCAACAGCACTaGGAAAGTACCGCCCTCCAC +
Preference number: 3 (lower is better)
Translates to: SITALILLLRIRKLNFTDGFQQH*ESTALH
Trigger: GTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATCC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGTGTATGTGTGGTTTaGATGCCAGCAATGCAAACA +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASCVCVV*MPAMQT
Trigger: TGTTTGCATTGCTGGCATCAAAACCACACATACACA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp ATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTaGTCGCTGGGCAAGGCAAATGTTACCATTACCAGT +
Preference number: 3 (lower is better)
Translates to: IFGPTFSKTSGS*SLGKANVTITS
Trigger: ACTGGTAATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp GACAAGCACACAGGAGGTAGAATATCAGAGTGGGGCTaGATCAAGGGCAAAAACTGGTCATTAAGTCATCTG +
Preference number: 3 (lower is better)
Translates to: DKHTGGRISEWG*IKGKNWSLSHL
Trigger: CAGATGACTTAATGACCAGTTTTTGCCCTTGATCCAGCCCCACTCTGATATTCTACCTCCTGTGTGCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp AACCCCATCCTGCTCTCATTGACATTTCAACCAGACTaGGCCATGGGACATTTGTTCAAGGCTAATTGCAAC +
Preference number: 3 (lower is better)
Translates to: NPILLSLTFQPD*AMGHLFKANCN
Trigger: GTTGCAATTAGCCTTGAACAAATGTCCCATGGCCCAGTCTGGTTGAAATGTCAATGAGAGCAGGATGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGAGAGCTTCCCTGGATaGTGTTTGAGCCATTTCCCA +
Preference number: 3 (lower is better)
Translates to: VYVCVCVCMCGFDASNANESFPG*CLSHFP
Trigger: TGGGAAATGGCTCAAACACAATCCAGGGAAGCTCTC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCAAGAGGCCAGTACATaGATCCCACATATAATTTTC +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASQEAST*IPHIIF
Trigger: GAAAATTATATGTGGGATCAATGTACTGGCCTCTTG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTCTTCAGTTAACTGTTaGTTTATTGCCTGTGAGGTC +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASSSVNC*FIACEV
Trigger: GACCTCACAGGCAATAAACAAACAGTTAACTGAAGA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp GGAAGTTGCAGTGGGATTAATGTCAATTGGAAGGGATaGAGCAAGTTTAGAGAAGGTGTTGGCACTAACGCT +
Preference number: 3 (lower is better)
Translates to: GSCSGINVNWKG*SKFREGVGTNA
Trigger: AGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGACATTAATCCCACTGCAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp TACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTaGGTCTTGCTCGCTGGGCAAGGCAAATGTTACCAT +
Preference number: 3 (lower is better)
Translates to: YRNLWTHFLKNQ*VLLAGQGKCYH
Trigger: ATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp AGTTTAGAGAAGGTGTTGGCACTAACGCTGCTTGTTTaGCAAATCATCATCACTGAGGTATTCCACCCAGAG +
Preference number: 3 (lower is better)
Translates to: SLEKVLALTLLV*QIIITEVFHPE
Trigger: CTCTGGGTGGAATACCTCAGTGATGATGATTTGCCAAACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTGTTCCTGGCCTTTCTaGGTAGTTGTCTTCCCTAAG +
Preference number: 3 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNCSWPF*VVVFPK
Trigger: CTTAGGGAAGACAACTACCAAGAAAGGCCAGGAACA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGCTGATGCACAGACATaGGAATTCATTACATTATCT +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASADAQT*EFITLS
Trigger: AGATAATGTAATGAATTCCAATGTCTGTGCATCAGC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCTCTTCACGGATTACTaGGCCTGCCTCATGTTATGT +
Preference number: 3 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNLFTDY*ACLMLC
Trigger: ACATAACATGAGGCAGGCCAAGTAATCCGTGAAGAG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAAAAAGAAGAGTGGATaGAATCAGAGTGAAGTCTTC +
Preference number: 3 (lower is better)
Translates to: RVKDASQNRPQPGVQVASKKKSG*NQSEVF
Trigger: GAAGACTTCACTCTGATTCAATCCACTCTTCTTTTT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 72 bp GTGTGTGTGTGTGTATATGTGTGTGTTTGTGTGAAGTaGAGTGTTGCTGCTGTAAGTAGTGTCCATAAGCCC +
Preference number: 3 (lower is better)
Translates to: VCVCVYVCVCVK*SVAAVSSVHKP
Trigger: GGGCTTATGGACACTACTTACAGCAGCAACACTTCACTTCACACAAACACACACATATACACACACACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 72 bp ATGAACTTTGGGAGTAATTTGAGCTATCCCAGTTTATaGCAGAGGGTCCTGAGGATGAGTCTCACAAGGCAA +
Preference number: 3 (lower is better)
Translates to: MNFGSNLSYPSL*QRVLRMSLTRQ
Trigger: TTGCCTTGTGAGACTCATCCTCAGGACCCTCTGTCATAAACTGGGATAGCTCAAATTACTCCCAAAGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp AATGAAGACAAGCACACAGGAGGTAGAATATCAGAGTaGGGCTGGATCAAGGGCAAAAACTGGTCATTAAGT +
Preference number: 3 (lower is better)
Translates to: NEDKHTGGRISE*GWIKGKNWSLS
Trigger: ACTTAATGACCAGTTTTTGCCCTTGATCCAGCCCCACTCTGATATTCTACCTCCTGTGTGCTTGTCTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp TGTCATTGTGGGAAGTGCATTTGTTCTGCTGAAGAGTaGTATATTTCTGGGGAGTTCTGTGACTGTGATGAC +
Preference number: 3 (lower is better)
Translates to: CHCGKCICSAEE*YISGEFCDCDD
Trigger: GTCATCACAGTCACAGAACTCCCCAGAAATATACCACTCTTCAGCAGAACAAATGCACTTCCCACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp AGTCCTTTGGACCCATCGTGGATCTCTTTAAGCCACTaGTACCCAAAAACATTCAGGACAAGCAAACATTTA +
Preference number: 3 (lower is better)
Translates to: SPLDPSWISLSH*YPKTFRTSKHL
Trigger: TAAATGTTTGCTTGTCCTGAATGTTTTTGGGTAGCAGTGGCTTAAAGAGATCCACGATGGGTCCAAAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGCCTACAGAAATCTTaGGACCCACTTTCTCAAAAA +
Preference number: 3 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGLQKS*DPLSQK
Trigger: TTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTGCATGGAATCTTCATaGTGTAGTCAACTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNCMESS*CSQLFL
Trigger: CAGGAACAGTTGACTACACAATGAAGATTCCATGCA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGTCTTTCTGGGCTCCTaGAGTTTATCTGGATTCCAA +
Preference number: 3 (lower is better)
Translates to: SITALILLLRIRKLNFTDVFLGS*SLSGFQ
Trigger: TTGGAATCCAGATAAACTCAAGGAGCCCAGAAAGAC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAGTTTAGAGAAGGTGTaGGCACTAACGCTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: SITALILLLRIRKLNFTDSLEKV*ALTLLV
Trigger: AACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 72 bp ACACATGTCATTAACTGTCTCCTTAAACTCTCACAGTaGTACTTCTTGGGTCCCACATCTTCCAAAGAAGTC +
Preference number: 3 (lower is better)
Translates to: THVINCLLKLSQ*YFLGPTSSKEV
Trigger: GACTTCTTTGGAAGATGTGGGACCCAAGAAGTATCACTGTGAGAGTTTAAGGAGACAGTTAATGACATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp TTTGCATGGAATCTTCATTGTGTAGTCAACTGTTCCTaGCCTTTCTTGGTAGTTGTCTTCCCTAAGCTCAAA +
Preference number: 3 (lower is better)
Translates to: FAWNLHCVVNCS*PFLVVVFPKLK
Trigger: TTTGAGCTTAGGGAAGACAACTACCAAGAAAGGCCAGGAACAGTTGACTACACAATGAAGATTCCATGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTCAACTGTCAACACTTaGAAACCCTACTCCATATTC +
Preference number: 3 (lower is better)
Translates to: VYVCVCVCMCGFDASNANSTVNT*KPYSIF
Trigger: GAATATGGAGTAGGGTTTCAAAGTGTTGACAGTTGA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCAAGAGGCCAGTACATaGATCCCACATATAATTTTC +
Preference number: 3 (lower is better)
Translates to: SITALILLLRIRKLNFTDQEAST*IPHIIF
Trigger: GAAAATTATATGTGGGATCAATGTACTGGCCTCTTG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCCACTGGAACTGCCCTaGATTCTCTATAGCTCATCA +
Preference number: 3 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWPLELP*ILYSSS
Trigger: TGATGAGCTATAGAGAATCAAGGGCAGTTCCAGTGG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp TTACTACGTAAGACTCTCTTCACGGATTACTTGGCCTaGCTCATGTTATGTCAAAGAGCCTTATGTTTTTCT +
Preference number: 3 (lower is better)
Translates to: LLRKTLFTDYLA*LMLCQRALCFS
Trigger: AGAAAAACATAAGGCTCTTTGACATAACATGAGGCAGGCCAAGTAATCCGTGAAGAGAGTCTTACGTAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp GTGATACAGGATGGTGACTATCTGATCGGTAAAGGGTaGCACCAAATAAATGCCACTAATTGTTTGAAAGAT +
Preference number: 3 (lower is better)
Translates to: VIQDGDYLIGKG*HQINATNCLKD
Trigger: ATCTTTCAAACAATTAGTGGCATTTATTTGGTGCCACCCTTTACCGATCAGATAGTCACCATCCTGTATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 72 bp CACTTGAAATACCAAAACAACATTTCTGAGCGTTGTTaGGGGACTGGCAAAGCAATCAGCTACTATAACAAA +
Preference number: 3 (lower is better)
Translates to: HLKYQNNISERC*GTGKAISYYNK
Trigger: TTTGTTATAGTAGCTGATTGCTTTGCCAGTCCCTCAACAACGCTCAGAAATGTTGTTTTGGTATTTCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 72 bp TATGGTGCCTTTCGAGGAAACTTCTCTGATAGTCAATaGAATACTCCATGTGGTCTTTGTTGGCAGATATAT +
Preference number: 3 (lower is better)
Translates to: YGAFRGNFSDSQ*NTPCGLCWQIY
Trigger: ATATATCTGCCAACAAAGACCACATGGAGTATTTCATTGACTATCAGAGAAGTTTCCTCGAAAGGCACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 72 bp AAAAGAAAGTCCAACATTAGTAATGGAATGGGCAACTaGCAAAGGTGCCTTGCCCTTAGACTCAAATTGTTT +
Preference number: 3 (lower is better)
Translates to: KRKSNISNGMGN*QRCLALRLKLF
Trigger: AAACAATTTGAGTCTAAGGGCAAGGCACCTTTGTCAGTTGCCCATTCCATTACTAATGTTGGACTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp CTCATTTGTACAGGTGCAGTATTAACCTTTTCTAATTaGTCTATGCCACAGTTTGTTATAGAGCCAAGAGAC +
Preference number: 3 (lower is better)
Translates to: LICTGAVLTFSN*SMPQFVIEPRD
Trigger: GTCTCTTGGCTCTATAACAAACTGTGGCATAGAGCAATTAGAAAAGGTTAATACTGCACCTGTACAAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGGCCTACAGAAATCTTaGGACCCACTTTCTCAAAAA +
Preference number: 3 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWGLQKS*DPLSQK
Trigger: TTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR TCA 72 bp ATATGCATGCAGAAGGAATGGAGTATTATAGAGACTTaGTACAATGGACATATGCACATGGAGGTACAAAAC +
Preference number: 3 (lower is better)
Translates to: ICMQKEWSIIET*YNGHMHMEVQN
Trigger: GTTTTGTACCTCCATGTGCATATGTCCATTGTATCAAGTCTCTATAATACTCCATTCCTTCTGCATGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CCA 72 bp TGCAAAGAAGTCAAGACGAGAAATACTGTGATAAAATaGCACCAATCTCAGAAGCTCACAAAAGACCAAAAA +
Preference number: 3 (lower is better)
Translates to: CKEVKTRNTVIK*HQSQKLTKDQK
Trigger: TTTTTGGTCTTTTGTGAGCTTCTGAGATTGGTGCCATTTTATCACAGTATTTCTCGTCTTGACTTCTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTGTACATCCTGGATTTaGATATGCCTGCATTTTGGA +
Preference number: 3 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWCTSWI*ICLHFG
Trigger: TCCAAAATGCAGGCATATCAAAATCCAGGATGTACA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTGTAATTTCAGGTTCTaGTCATTGTGGGAAGTGCAT +
Preference number: 3 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWCNFRF*SLWEVH
Trigger: ATGCACTTCCCACAATGACAAGAACCTGAAATTACA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTGGCAAACATTTAATTaGGACTTTGGGGATTTTTGC +
Preference number: 3 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWWQTFN*DFGDFC
Trigger: GCAAAAATCCCCAAAGTCCAAATTAAATGTTTGCCA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR GCA 72 bp GATTTATTTGGCTTCAAGACTACACAATTATATCTTTaGCTTGACTACTTCAAGCTAGATCCAGATAATCAC +
Preference number: 3 (lower is better)
Translates to: DLFGFKTTQLYL*LDYFKLDPDNH
Trigger: GTGATTATCTGGATCTAGCTTGAAGTAGTCAAGGCAAAGATATAATTGTGTAGTCTTGAAGCCAAATAAATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGGAAGCCGGACGTCGTaGCCGCCGCCGCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGGSRTS*PPPLGH
Trigger: GTGGCCAAGCGGCGGCGGCCACGACGTCCGGCTTCC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTTGAGCTGGGGATCTTaGCGCCGCAACCTGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGLSWGS*RRNLRF
Trigger: GAAGCGCAGGTTGCGGCGCCAAGATCCCCAGCTCAA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGGAGCAGCAGCTCACTaGGTCCTGAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGGAAAH*VLRNHR
Trigger: CCTGTGGTTTCTCAGGACCCAGTGAGCTGCTGCTCC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp CTCACCTTGATGAGACCACAAGGGAACCAGCATCCTTaGCAGACTGACCTGGGAGCAGCAGCTCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: LTLMRPQGNQHP*QTDLGAAAHWV
Trigger: GACCCAGTGAGCTGCTGCTCCCAGGTCAGTCTGCAAAGGATGCTGGTTCCCTTGTGGTCTCATCAAGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGGGTCTCAGGGGTGTaGGTGGGTCTTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASWVSGV*VGLGQL
Trigger: CAGCTGGCCAAGACCCACTCACACCCCTGAGACCCA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGGAACCAGCATCCTTTaGAGACTGACCTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGGTSIL*RLTWEQ
Trigger: CTGCTCCCAGGTCAGTCTGCAAAGGATGCTGGTTCC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGGCCGGTCCCAGTGCTaGTCCCGCGCCTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANGRSQC*SRACRF
Trigger: GAAGCGGCAGGCGCGGGAGCAGCACTGGGACCGGCC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGGCTGCTCCGCCTCCTaGTGGCAGACGGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDGCSAS*WQTAGP
Trigger: GGGACCGGCCGTCTGCCAGCAGGAGGCGGAGCAGCC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCACTTGTGCTTTTACTTaGCGTCACCCCAGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGTCAFT*RHPRLR
Trigger: CCGAAGCCTGGGGTGACGCCAAGTAAAAGCACAAGT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGGTGTGAGTGGGTCTTaGCCAGCTGAGTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGGVSGS*PAELNH
Trigger: ATGGTTCAACTCAGCTGGCCAAGACCCACTCACACC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCGATGGCCGCGGCCATaGTGGCCCCGGGAACGGGTC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDRWPRP*WPRERV
Trigger: GACCCGTTCCCGGGGCCACCATGGCCGCGGCCATCG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
3UTR CAA 72 bp GCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTaGGCTGGCAGCTGGGCAGTACTTTGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: APRPYKSNLRVD*AGSWAVLCQPQ
Trigger: CTGAGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAGCCACTGGGCAACATaGGCCCCAGATGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKSHWAT*APDAEL
Trigger: TAGCTCAGCATCTGGGGCTCATGTTGCCCAGTGGCT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACAGCCGTCTTGCCCATaGTCTGCTGAGTATGAGGGG +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKQPSCP*SAEYEG
Trigger: CCCCTCATACTCAGCAGAGCATGGGCAAGACGGCTG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCACACAACAGCCGTCTTaGCCATGCTCTGCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGTQQPS*PCSAEY
Trigger: ATACTCAGCAGAGCATGGGCAAGACGGCTGTTGTGT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGCCTGGTGTTCAAGTTaGCTCGCTCAATATGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGAWCSS*LAQYAC
Trigger: ACAGGCATATTGAGCGAGGCAACTTGAACACCAGGC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTGCTGCTCCCGCGCCTaGCGCTTCTGGCGGATCAAG +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLCCSRA*RFWRIK
Trigger: CTTGATCCGCCAGAAGCGGCAGGCGCGGGAGCAGCA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCCTTTGGACCCATCGTaGATCTCTTTAAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGPLDPS*ISLSHC
Trigger: GCAGTGGCTTAAAGAGATCCACGATGGGTCCAAAGG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTATGCTGCAGACATTTaGTGGGTAGAGGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGYAADI*WVEARD
Trigger: ATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTGGGTCTCAGGGGTGTaGGTGGGTCTTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLWVSGV*VGLGQL
Trigger: CAGCTGGCCAAGACCCACTCACACCCCTGAGACCCA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTGCCCTGAAGACACATaGGAAAATGTGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGCPEDT*ENVADS
Trigger: GGAATCAGCCACATTTTCTCATGTGTCTTCAGGGCA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCACACTCGTCATGCAATaGTTTAGGTGGCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGTLVMQ*FRWLDQ
Trigger: TTGGTCCAGCCACCTAAAGCATTGCATGACGAGTGT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCATTAGCCACCCAATATaGAGGTGTGCTCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGISHPI*RCAPTP
Trigger: TGGAGTAGGAGCACACCTGCATATTGGGTGGCTAAT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAGAGCCCGCGGTTCTTaGTGGGGCTGCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDRARGS*WGCSAS
Trigger: GGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCATATCAGAGTGGGGCTaGATCAAGGGCAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGISEWG*IKGKNW
Trigger: CCAGTTTTTGCCCTTGATCCAGCCCCACTCTGATAT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGGTAGAATATCAGAGTaGGGCTGGATCAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGGRISE*GWIKGK
Trigger: TTTGCCCTTGATCCAGCCCCACTCTGATATTCTACC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGCTGCAGACATTTGGTaGGTAGAGGCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKAADIW*VEARDA
Trigger: AGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGCTGCAGACATTTGGTaGGTAGAGGCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASAADIW*VEARDA
Trigger: AGCATCCCTGGCCTCTACCCACCAAATGTCTGCAGC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCCAGTCGCTTTCCCTTaGTATAGCCTTGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGPVAFP*YSLVLN
Trigger: ATTCAGAACAAGGCTATATCAAGGGAAAGCGACTGG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTTAATATGGGGACAATaGAGACAAGCACACAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGLIWGQ*RQAHRR
Trigger: CCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGAATGGAAATGCATGTaGAATCTGGCTTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGEWKCM*NLAWLR
Trigger: TCTGAGCCAAGCCAGATTTCACATGCATTTCCATTC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATGGGTCTTGGCCAGCTaGGTTGAACCATTTCTCACC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKWVLAS*VEPFLT
Trigger: GGTGAGAAATGGTTCAACTCAGCTGGCCAAGACCCA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCGCTCAATATGCCTGTaGAGTCAGACCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASRSICL*SQTCRK
Trigger: CTTCCTGCAGGTCTGACTGCACAGGCATATTGAGCG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTTGCCTCGCTCAATATaGCTGTGCAGTCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLPRSI*LCSQTC
Trigger: GCAGGTCTGACTGCACAGGCATATTGAGCGAGGCAA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCCACCAGGTTGCCGTTaGAGAGCCCGCGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNPPGCR*RARGSC
Trigger: GCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGTGGGTCTTGCTCGCTaGGCAAGGCAAATGTTACCA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKVGLAR*ARQMLP
Trigger: TGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCAC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGATTTGGCTGGCAGCTaGGCAGTACTTTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASDLAGS*AVLCQP
Trigger: AGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTTGTCTTACTCTTGTTaGCTGGTTTGCCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGLSYSC*LVCLHS
Trigger: TGAATGGAGGCAAACCAGTCAACAAGAGTAAGACAA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTAGCCACTGGGCAACATaGGCCCCAGATGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLSHWAT*APDAEL
Trigger: TAGCTCAGCATCTGGGGCTCATGTTGCCCAGTGGCT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAGCTATCCCAGTTTATaGCAGAGGGTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASSYPSL*QRVLRM
Trigger: CATCCTCAGGACCCTCTGTCATAAACTGGGATAGCT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGAAAGCTGTTTAGACTaGGAGAACTTCTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGESCLD*ENFCLG
Trigger: TCCAAGACAGAAGTTCTCTCAGTCTAAACAGCTTTC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGCAACCTGCGCTTCTTaGGGCCGAAGATGCGCACTT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLATCAS*GRRCAL
Trigger: AAGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAGTAGTAGCCTTGCCTaGAATATAACCTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGSSSLA*NITWSL
Trigger: TAGTGACCAGGTTATATTGCAGGCAAGGCTACTACT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTTGCAGACGCACTTGTaGTTTTACTTGGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLQTHL*FYLASP
Trigger: GGGTGACGCCAAGTAAAAGCACAAGTGCGTCTGCAA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTATGCTGCAGACATTTaGTGGGTAGAGGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASYAADI*WVEARD
Trigger: ATCCCTGGCCTCTACCCACCAAATGTCTGCAGCATA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAATGCAATGCTTTAGGTaGCTGGACCAACAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKMQCFR*LDQQGQ
Trigger: TTGGCCCTGTTGGTCCAGCCACCTAAAGCATTGCAT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACTGATTCCCCAGGGATaGAAGCCAGCAAAAATGCAC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKLIPQG*KPAKMH
Trigger: GTGCATTTTTGCTGGCTTCCATCCCTGGGGAATCAG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGTGGCCGCCGCCGCTTaGCCACGTCCGAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWVAAAA*PRPSGE
Trigger: CTCTCCACTCGGACGTGGCCAAGCGGCGGCGGCCAC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGCCCGCGGTTCTTGCTaGGGCTGCTCCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWARGSC*GCSASC
Trigger: GCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAAGTCACAACACCTGTaGGGATCTGGCTATGTTGTC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKKSQHL*GSGYVV
Trigger: GACAACATAGCCAGATCCTCACAGGTGTTGTGACTT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAGAGGCATGTACTGGTaGAATACACAGTACCGGACT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASRGMYW*NTQYRT
Trigger: AGTCCGGTACTGTGTATTTCACCAGTACATGCCTCT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACAACAGACTGTATTCTaGGATCATGGCAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKQQTVF*DHGKAP
Trigger: AGGTGCCTTGCCATGATCTCAGAATACAGTCTGTTG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCCAAAACAACATTTCTaGGCGTTGTTGAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASPKQHF*ALLRDW
Trigger: CCAGTCCCTCAACAACGCTCAGAAATGTTGTTTTGG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGTACATCCTGGATTTTaGTATGCCTGCATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGVHPGF*YACILE
Trigger: TTCCAAAATGCAGGCATATCAAAATCCAGGATGTAC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACACTGGAACTGCCCTTaGTTCTCTATAGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKHWNCP*FSIAHH
Trigger: GTGATGAGCTATAGAGAATCAAGGGCAGTTCCAGTG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCACTGCACTCTTACTTTaGGAAGTGTGTCAAGAAATG +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGTALLL*EVCQEM
Trigger: CATTTCTTGACACACTTCTCAAAGTAAGAGTGCAGT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGCATCCTTTGCAGACTaGCCTGGGAGCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNASFAD*PGSSSS
Trigger: TGAGCTGCTGCTCCCAGGTCAGTCTGCAAAGGATGC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTTCCCTTTCATAGCTTaGCCTTCCTTATTTAATCCC +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGFPFIA*PSLFNP
Trigger: GGGATTAAATAAGGAAGGGCAAGCTATGAAAGGGAA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGGGAGCACAGTATCTaGTACTGGACAGAGCGTATA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASWEHSI*YWTERI
Trigger: TATACGCTCTGTCCAGTAGCAGATACTGTGCTCCCA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACGTTTGCATTGCTGCTaGAGGAAAGAACACAACAGC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKRLHCC*RKEHNS
Trigger: GCTGTTGTGTTCTTTCCTGCAGCAGCAATGCAAACG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACAGGTACCTACTACATaGAGCTCATCATTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKQVPTT*SSSLLS
Trigger: GGACAGCAATGATGAGCTGCATGTAGTAGGTACCTG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTGTTCAGTTCCATTTTaGTCTTTACATAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGCSVPF*SLHRVE
Trigger: CTCCACCCTATGTAAAGAGCAAAATGGAACTGAACA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCCTGAGATTAAGGAGTaGAACCATGTTGTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGPEIKE*NHVVVL
Trigger: TAGAACTACAACATGGTTGCACTCCTTAATCTCAGG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAAGAGACACTCGTCATaGAATGCTTTAGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKKRHSS*NALGGW
Trigger: CCAGCCACCTAAAGCATTGCATGACGAGTGTCTCTT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTTTTCACTCCCTGGATaGCAACAACACGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASFSLPG*QQHVVP
Trigger: TGGGACTACGTGTTGTTGCCATCCAGGGAGTGAAAA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACCTGTTTTCACTCCCTaGATGGCAACAACACGTAGT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKPVFTP*MATTRS
Trigger: ACTACGTGTTGTTGCCATCCAGGGAGTGAAAACAGG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGATGGTTCTCGGTACATaGCAACTTCCAATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASMVLGT*QLPMAW
Trigger: CCAAGCCATTGGAAGTTGCCATGTACCGAGAACCAT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGCTCTTTACATAGGGTaGAGAATTGTCATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGALYIG*RIVMSS
Trigger: AGAAGACATGACAATTCTCCACCCTATGTAAAGAGC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAATACAAATGACCTTTaGATTTCTCTATCACGGCGC +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGNTNDL*ISLSRR
Trigger: GCGCCGTGATAGAGAAATCCAAAGGTCATTTGTATT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCAATGCATGTGAAATCTaGCTTGGCTCAGAATATCCT +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGNACEI*LGSEYP
Trigger: AGGATATTCTGAGCCAAGCCAGATTTCACATGCATT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGAGCAGCAGCTCACTaGGTCCTGAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGAAAH*VLRNHR
Trigger: CCTGTGGTTTCTCAGGACCCAGTGAGCTGCTGCTCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCTTTGCAGACTGACCTaGGAGCAGCAGCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNLCRLT*EQQLTG
Trigger: CCCAGTGAGCTGCTGCTCCCAGGTCAGTCTGCAAAG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCAGCCAGCTGTTCTCTaGCTAGGCTGGGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDQPAVL*LGWVSG
Trigger: CCCTGAGACCCAGCCTAGCCAGAGAACAGCTGGCTG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTTGGCCACGTCCGAGTaGAGAGCGGGACCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWLATSE*RAGPRL
Trigger: CAGCCGCGGTCCCGCTCTCCACTCGGACGTGGCCAA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTGCTCCGCCTCCTGCTaGCAGACGGCCGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWCSASC*QTAGPS
Trigger: ACTGGGACCGGCCGTCTGCCAGCAGGAGGCGGAGCA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376143.5
3UTR CAA 72 bp GGATGTCAAACACATATCATAGAGAGCTTCCCTGGATaGTGTTTGAGCCATTTCCCACCCAGGCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: GCQTHIIESFPG*CLSHFPPRQCR
Trigger: TCGGCATTGCCTGGGTGGGAAATGGCTCAAACACAATCCAGGGAAGCTCTCTATGATATGTGTTTGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp CTGGGCTCCTTGAGTTTATCTGGATTCCAACAGCACTaGGAAAGTACCGCCCTCCACTACCTCAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: LGSLSLSGFQQH*ESTALHYLKCK
Trigger: TTTGCATTTGAGGTAGTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGCTTCCTGATTCCCTaGTTGCTCTCCGACCTAAGC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGFLIP*LLSDLS
Trigger: GCTTAGGTCGGAGAGCAATCAGGGAATCAGGAAGCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGGCTTCCTGATTCCCTaGTTGCTCTCCGACCTAAGC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANGFLIP*LLSDLS
Trigger: GCTTAGGTCGGAGAGCAATCAGGGAATCAGGAAGCC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATTCCCATGCTACAGGTaGGACCAGACACAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKFPCYR*DQTQSK
Trigger: TTTACTTTGTGTCTGGTCTCACCTGTAGCATGGGAA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTTCCCATGCTACAGGTaGGACCAGACACAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASFPCYR*DQTQSK
Trigger: TTTACTTTGTGTCTGGTCTCACCTGTAGCATGGGAA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACCAGTCGCTTTCCCTTaGTATAGCCTTGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKPVAFP*YSLVLN
Trigger: ATTCAGAACAAGGCTATATCAAGGGAAAGCGACTGG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTCCTTAACAATTACATaGGAGAGGTCTGGATTCTTA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGSLTIT*ERSGFL
Trigger: TAAGAATCCAGACCTCTCTCATGTAATTGTTAAGGA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTAGGATGGTGACTATCTaGTCGGTAAAGGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLRMVTI*SVKGGT
Trigger: GGTGCCACCCTTTACCGATCAGATAGTCACCATCCT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGGCAAATATACTGAGTaGCTGTATGCATTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGGKYTE*LYAFLA
Trigger: TGCTAAAAATGCATACAGTCACTCAGTATATTTGCC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCAGCCTACATCTGTCTaGTGGAACCCTCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNQPTSV*WNPLPV
Trigger: CACAGGGAGAGGGTTCCATCAGACAGATGTAGGCTG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTGGGTCTTGGCCAGCTaGGTTGAACCATTTCTCACC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLWVLAS*VEPFLT
Trigger: GGTGAGAAATGGTTCAACTCAGCTGGCCAAGACCCA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCATTATATCTTTGCCTTaGCTACTTCAAGCTAGATCC +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGIISLP*LLQARS
Trigger: GGATCTAGCTTGAAGTAGTCAAGGCAAAGATATAAT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACTCCACTACCTCAAATaGAAACACAATCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKLHYLK*KHNLCQ
Trigger: CTGGCAGAGATTGTGTTTGCATTTGAGGTAGTGGAG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATGTGGAAACTGTGAATaGTGGGATGGATGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKCGNCE*WDGWNG
Trigger: TCCATTCCATCCATCCCAGCATTCACAGTTTCCACA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACCCAATATGCAGGTGTaGTCCTACTCCAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKPNMQV*SYSKKI
Trigger: GATTTTCTTGGAGTAGGAGCACACCTGCATATTGGG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAGATATCCACCAGGTTaGCGTTGCAGAGCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDRYPPG*RCRARG
Trigger: ACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTAGGCAATGCCGACCTTaGGAGCACAGTATCTGCTAC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLRQCRP*EHSICY
Trigger: GTAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGAGCGGGAGTCCTTTaGACCCATCGTGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGAGVL*THRGSL
Trigger: AAGAGATCCACGATGGGTCCAAAGGACTCCCGCTCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACTGATCGGTAAAGGGTaGCACCAAATAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKLIGKG*HQINAT
Trigger: AGTGGCATTTATTTGGTGCCACCCTTTACCGATCAG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCTGATCGGTAAAGGGTaGCACCAAATAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLIGKG*HQINAT
Trigger: AGTGGCATTTATTTGGTGCCACCCTTTACCGATCAG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTTGCTTTTAGGGAACTaGATGTGTGTATGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLLLGN*MCVWGR
Trigger: TCTCCCCCATACACACATCCAGTTCCCTAAAAGCAA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGACATTTCAACCAGACTaGGCCATGGGACATTTGTTC +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASTFQPD*AMGHLF
Trigger: GAACAAATGTCCCATGGCCCAGTCTGGTTGAAATGT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGCATGCAAATCAACCTaGACCCTCAGGAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKACKST*TLRKTS
Trigger: ACTTGTTTTCCTGAGGGTCCAGGTTGATTTGCATGC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGGTGTGAGTGGGTCTTaGCCAGCTGAGTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLGVSGS*PAELNH
Trigger: ATGGTTCAACTCAGCTGGCCAAGACCCACTCACACC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAACAGCCAGCTGTTCTCTaGCTAGGCTGGGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQQPAVL*LGWVSG
Trigger: CCCTGAGACCCAGCCTAGCCAGAGAACAGCTGGCTG...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCATGAAAGTTTTTGCCTaGAGATACATCACAGATAGG +
Preference number: 4 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGMKVFA*RYITDR
Trigger: CCTATCTGTGATGTATCTCCAGGCAAAAACTTTCAT...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTTGTCTTACTCTTGTTaGCTGGTTTGCCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLSYSC*LVCLHS
Trigger: TGAATGGAGGCAAACCAGTCAACAAGAGTAAGACAA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACTCCCTGGATTGTGTTTaGGCCATTTCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDSLDCV*AISHPG
Trigger: GCCTGGGTGGGAAATGGCTCAAACACAATCCAGGGA...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATGTGTTTGTGTGAAGTaGAGTGTTGCTGCTGTAAGT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKCVCVK*SVAAVS
Trigger: ACTTACAGCAGCAACACTTCACTTCACACAAACACA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACAGGATGGTGACTATCTaGTCGGTAAAGGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANRMVTI*SVKGGT
Trigger: GGTGCCACCCTTTACCGATCAGATAGTCACCATCCT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGTGCATTTGTTCTGCTaGAGAGTGGTATATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKVHLFC*RVVYFW
Trigger: CCAGAAATATACCACTCTTCAGCAGAACAAATGCAC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGACCTCTAAGATGCACTaGGCATTGACAAACAGGAAA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASTSKMH*ALTNRK
Trigger: TTTCCTGTTTGTCAATGCTCAGTGCATCTTAGAGGT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTAATGGAATGGGCAACTaGCAAAGGTGCCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLNGMGN*QRCLAL
Trigger: AAGGGCAAGGCACCTTTGTCAGTTGCCCATTCCATT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCGCTCAATATGCCTGTaGAGTCAGACCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNRSICL*SQTCRK
Trigger: CTTCCTGCAGGTCTGACTGCACAGGCATATTGAGCG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTTGCCTCGCTCAATATaGCTGTGCAGTCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANLPRSI*LCSQTC
Trigger: GCAGGTCTGACTGCACAGGCATATTGAGCGAGGCAA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGCCTGGTGTTCAAGTTaGCTCGCTCAATATGCCTGT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLAWCSS*LAQYAC
Trigger: ACAGGCATATTGAGCGAGGCAACTTGAACACCAGGC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGAGCTGGGGATCAGTTaGGTTCTTGTTTTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASELGIS*VLVFLK
Trigger: CTTAAGAAAAACAAGAACCCAACTGATCCCCAGCTC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAACATCATGCAAAGATaGTTCTCGGTACATGGCAAC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKNIMQR*FSVHGN
Trigger: GTTGCCATGTACCGAGAACCATCTTTGCATGATGTT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACACTTGTGCTTTTACTTaGCGTCACCCCAGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNTCAFT*RHPRLR
Trigger: CCGAAGCCTGGGGTGACGCCAAGTAAAAGCACAAGT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAACACCTGTGAGGATCTaGCTATGTTGTCTTACTCTT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKTPVRI*LCCLTL
Trigger: AAGAGTAAGACAACATAGCCAGATCCTCACAGGTGT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAATGCTTTAGGTGGCTaGACCAACAGGGCCAACCGT +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGNALGG*TNRANR
Trigger: ACGGTTGGCCCTGTTGGTCCAGCCACCTAAAGCATT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATGTTCTGCTGAAGAGTaGTATATTTCTGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKCSAEE*YISGEF
Trigger: GAACTCCCCAGAAATATACCACTCTTCAGCAGAACA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGTTCTGCTGAAGAGTaGTATATTTCTGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASCSAEE*YISGEF
Trigger: GAACTCCCCAGAAATATACCACTCTTCAGCAGAACA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTGCACAGAAGGGAGATaGGAACATTCTCAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLCTEGR*EHSQGS
Trigger: GGACCCTTGAGAATGTTCCCATCTCCCTTCTGTGCA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp AATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTaGCTCGCTGGGCAAGGCAAATGTTACCATTACCAG +
Preference number: 4 (lower is better)
Translates to: NLWTHFLKNQWV*LAGQGKCYHYQ
Trigger: CTGGTAATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACTGGTCACTATACCCTTaGGCTGGGGATCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDWSLYP*AGDQLG
Trigger: ACCCAACTGATCCCCAGCTCAAGGGTATAGTGACCA...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGGGGGTGCAACAGGTTaGGATTTATCCACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANGGATG*DLSTCN
Trigger: GTTGCAAGTGGATAAATCTCAACCTGTTGCACCCCC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGGGGTGCAACAGGTTaGGATTTATCCACTTGCAAC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGGATG*DLSTCN
Trigger: GTTGCAAGTGGATAAATCTCAACCTGTTGCACCCCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATCCCTGGATTGTGTTTaGGCCATTTCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQSLDCV*AISHPG
Trigger: GCCTGGGTGGGAAATGGCTCAAACACAATCCAGGGA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCAACAGACTGTATTCTaGGATCATGGCAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLQQTVF*DHGKAP
Trigger: AGGTGCCTTGCCATGATCTCAGAATACAGTCTGTTG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCACTGGAACTGCCCTTaGTTCTCTATAGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLHWNCP*FSIAHH
Trigger: GTGATGAGCTATAGAGAATCAAGGGCAGTTCCAGTG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCCATCCTGCTCTCATTaGCATTTCAACCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGPSCSH*HFNQTG
Trigger: CCCAGTCTGGTTGAAATGTCAATGAGAGCAGGATGG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAGCTATCCCAGTTTATaGCAGAGGGTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGSYPSL*QRVLRM
Trigger: CATCCTCAGGACCCTCTGTCATAAACTGGGATAGCT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACATGAGAAAATGTGGCTaGTTCCCCAGGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNMRKCG*FPRDGS
Trigger: GCTTCCATCCCTGGGGAATCAGCCACATTTTCTCAT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACAATGGAATGGGCAACTaGCAAAGGTGCCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANNGMGN*QRCLAL
Trigger: AAGGGCAAGGCACCTTTGTCAGTTGCCCATTCCATT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACAAAACCAGTGGGTCTTaGTCGCTGGGCAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANKTSGS*SLGKAN
Trigger: ATTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAAAACCAGTGGGTCTTaGTCGCTGGGCAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNKTSGS*SLGKAN
Trigger: ATTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCTTCATAGGGATAAATaGCCTTATAGACACCCCATA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLHRDK*PYRHPI
Trigger: TATGGGGTGTCTATAAGGGCATTTATCCCTATGAAG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCTCCCACACCAGATATaGATGCAGAAGGAATGGAGT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLLPHQI*MQKEWS
Trigger: ACTCCATTCCTTCTGCATGCATATCTGGTGTGGGAG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGGAAACCTGGGGTCATaGAAAGAAGTCAAGACGAGA +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLGNLGS*KEVKTR
Trigger: TCTCGTCTTGACTTCTTTGCATGACCCCAGGTTTCC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACCGTGTCATAGCCACTaGTATCCTAATTTATTGAGT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKPCHSH*YPNLLS
Trigger: ACTCAATAAATTAGGATAGCAGTGGCTATGACACGG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTATTAGCCACCCAATATaGAGGTGTGCTCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLISHPI*RCAPTP
Trigger: TGGAGTAGGAGCACACCTGCATATTGGGTGGCTAAT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAACCCTCTCCCTGTGTaGTTCCCATTTAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNNPLPV*FPFKRG
Trigger: GCCTCTCTTAAATGGGAAGCACACAGGGAGAGGGTT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACAACCCTCTCCCTGTGTaGTTCCCATTTAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANNPLPV*FPFKRG
Trigger: GCCTCTCTTAAATGGGAAGCACACAGGGAGAGGGTT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAGAAAGAGTGAAAGATaGTTCACAAAATCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASRKSER*FTKSAS
Trigger: TGAGGCCGATTTTGTGAAGCATCTTTCACTCTTTCT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACATGAGGTTAGTGCAGTaGCGGGTCTTCCCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANMRLVQ*RVFPKL
Trigger: AAGCTTAGGGAAGACCCGGCACTGCACTAACCTCAT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAATGAGCTGCTGGTTTaGTTTTCTTTACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKNELLV*FSLLCS
Trigger: GGAACAGAGTAAAGAAAACCAAACCAGCAGCTCATT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAATGGACATATGCACATaGAGGTACAAAACACACAGT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKMDICT*RYKTHS
Trigger: ACTGTGTGTTTTGTACCTCCATGTGCATATGTCCAT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGATGGACATATGCACATaGAGGTACAAAACACACAGT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASMDICT*RYKTHS
Trigger: ACTGTGTGTTTTGTACCTCCATGTGCATATGTCCAT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCCTTTGGACCCATCGTaGATCTCTTTAAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNPLDPS*ISLSHC
Trigger: GCAGTGGCTTAAAGAGATCCACGATGGGTCCAAAGG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGATTCCAACAGCACTTaGAAAGTACCGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGDSNST*KVPPST
Trigger: AGTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTATATCAGAGTGGGGCTaGATCAAGGGCAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLISEWG*IKGKNW
Trigger: CCAGTTTTTGCCCTTGATCCAGCCCCACTCTGATAT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAATGCTTTAGGTGGCTaGACCAACAGGGCCAACCGT +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDNALGG*TNRANR
Trigger: ACGGTTGGCCCTGTTGGTCCAGCCACCTAAAGCATT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGAAAATGCTCTACTATaGCATGAAGCTAAGCATTCC +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKENALL*HEAKHS
Trigger: GGAATGCTTAGCTTCATGCCATAGTAGAGCATTTTC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTGCACAGAAGGGAGATaGGAACATTCTCAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANCTEGR*EHSQGS
Trigger: GGACCCTTGAGAATGTTCCCATCTCCCTTCTGTGCA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCTGATTCCCCAGGGATaGAAGCCAGCAAAAATGCAC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNLIPQG*KPAKMH
Trigger: GTGCATTTTTGCTGGCTTCCATCCCTGGGGAATCAG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGTGAAAACTGCCTGCTaGGATGTCAGGTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNVKTAC*DVRLQH
Trigger: ATGCTGCAACCTGACATCCCAGCAGGCAGTTTTCAC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp AGGAGAGCCATTATACCCGTTGTCTTTCTGGGCTCCTaGAGTTTATCTGGATTCCAACAGCACTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RRAIIPVVFLGS*SLSGFQQHLES
Trigger: ACTTTCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAGCCCAGAAAGACAACGGGTATAATGGCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp AGTACTTTGTCAGCCTCAGCTCCACTGGAACTGCCCTaGATTCTCTATAGCTCATCACAAAACCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: STLSASAPLELP*ILYSSSQNLRY
Trigger: ATACCTGAGGTTTTGTGATGAGCTATAGAGAATCAAGGGCAGTTCCAGTGGAGCTGAGGCTGACAAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp AGACCATCTATAAGAATCAACCCCATCCTGCTCTCATaGACATTTCAACCAGACTGGGCCATGGGACATTTG +
Preference number: 4 (lower is better)
Translates to: RPSIRINPILLS*TFQPDWAMGHL
Trigger: CAAATGTCCCATGGCCCAGTCTGGTTGAAATGTCAATGAGAGCAGGATGGGGTTGATTCTTATAGATGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGTCCATAAGCCCATTTaGCTGTATTACAAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASVHKPI*LYYKLV
Trigger: AACTAACTTGTAATACAGTCAAATGGGCTTATGGAC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAAGAAACCTCAGCTATaGCTACTATTTCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKKKPQL*LLFHSK
Trigger: CTTTGAGTGAAATAGTAGTCATAGCTGAGGTTTCTT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGCAAATCATCATCACTaGGGTATTCCACCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGANHHH*GIPPRD
Trigger: GTCTCTGGGTGGAATACCTCAGTGATGATGATTTGC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATCCTTAACAATTACATaGGAGAGGTCTGGATTCTTA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKSLTIT*ERSGFL
Trigger: TAAGAATCCAGACCTCTCTCATGTAATTGTTAAGGA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAATGCCACTAATTGTTTaGAAGATTAGATGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKMPLIV*KIRCLA
Trigger: TGCGAGACATCTAATCTTTCAAACAATTAGTGGCAT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAGAAGCACTAATGATTaGTTCTTGCCCCTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKRSTND*FLPLFN
Trigger: ATTGAAAAGGGGCAAGAATCAATCATTAGTGCTTCT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCAGCTCACTGGGTCCTaGGAAACCACAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWQLTGS*ETTGLS
Trigger: TGACAGCCCTGTGGTTTCTCAGGACCCAGTGAGCTG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACATGAGAAAATGTGGCTaGTTCCCCAGGGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDMRKCG*FPRDGS
Trigger: GCTTCCATCCCTGGGGAATCAGCCACATTTTCTCAT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTGCCCTGAAGACACATaGGAAAATGTGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNCPEDT*ENVADS
Trigger: GGAATCAGCCACATTTTCTCATGTGTCTTCAGGGCA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGGATTGAATCAGAGTaGAGTCTTCAGTTAACTGTT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASWIESE*SLQLTV
Trigger: AACAGTTAACTGAAGACTTCACTCTGATTCAATCCA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAAAAGAAGAGTGGATTaGATCAGAGTGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASKRRVD*IRVKSS
Trigger: TGAAGACTTCACTCTGATTCAATCCACTCTTCTTTT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGCATTTTGTCAGGCTTaGATGAAAAAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASAFCQA*MKKKVQ
Trigger: TTGGACTTTCTTTTTCATTCAAGCCTGACAAAATGC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGTTTCCCCAACATCATaGAAAGATGGTTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLVSPTS*KDGSRY
Trigger: GTACCGAGAACCATCTTTGCATGATGTTGGGGAAAC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACTTGCAGACGCACTTGTaGTTTTACTTGGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDLQTHL*FYLASP
Trigger: GGGTGACGCCAAGTAAAAGCACAAGTGCGTCTGCAA...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCAGCCGTCTTGCCCATaGTCTGCTGAGTATGAGGGG +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWQPSCP*SAEYEG
Trigger: CCCCTCATACTCAGCAGAGCATGGGCAAGACGGCTG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACACACAACAGCCGTCTTaGCCATGCTCTGCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDTQQPS*PCSAEY
Trigger: ATACTCAGCAGAGCATGGGCAAGACGGCTGTTGTGT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGATACAATGGACATATaGACATGGAGGTACAAAACA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKDTMDI*TWRYKT
Trigger: TGTTTTGTACCTCCATGTGCATATGTCCATTGTATC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGGATACAATGGACATATaGACATGGAGGTACAAAACA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASDTMDI*TWRYKT
Trigger: TGTTTTGTACCTCCATGTGCATATGTCCATTGTATC...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCTCCCACACCAGATATaGATGCAGAAGGAATGGAGT +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANLPHQI*MQKEWS
Trigger: ACTCCATTCCTTCTGCATGCATATCTGGTGTGGGAG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGAAACCTGGGGTCATaGAAAGAAGTCAAGACGAGA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGNLGS*KEVKTR
Trigger: TCTCGTCTTGACTTCTTTGCATGACCCCAGGTTTCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACACACTCGTCATGCAATaGTTTAGGTGGCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANTLVMQ*FRWLDQ
Trigger: TTGGTCCAGCCACCTAAAGCATTGCATGACGAGTGT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTGTGATGACAGAGACTaGGACAAACATGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLCDDRD*DKHDGL
Trigger: GAGACCATCATGTTTGTCGCAGTCTCTGTCATCACA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACATAGTGAAAACTGCCTaGTGGGATGTCAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANIVKTA*WDVRLQ
Trigger: CTGCAACCTGACATCCCAGCAGGCAGTTTTCACTAT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACATAGTGAAAACTGCCTaGTGGGATGTCAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNIVKTA*WDVRLQ
Trigger: CTGCAACCTGACATCCCAGCAGGCAGTTTTCACTAT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACATGGTTCTCGGTACATaGCAACTTCCAATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNMVLGT*QLPMAW
Trigger: CCAAGCCATTGGAAGTTGCCATGTACCGAGAACCAT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCTTACTCTTGTTGACTaGTTTGCCTCCATTCATTAT +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASLTLVD*FASIHY
Trigger: ATAATGAATGGAGGCAAACCAGTCAACAAGAGTAAG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGGTGTCTTCTTGTTGTaGGGGGTGCAACAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQGVFLL*GVQQVE
Trigger: CTCAACCTGTTGCACCCCCCACAACAAGAAGACACC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCACAGTATCTGCTACTaGACAGAGCGTATATGTGTG +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLHSICY*TERICV
Trigger: CACACATATACGCTCTGTCCAGTAGCAGATACTGTG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTTTCTCAAAAACCAGTaGGTCTTGCTCGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNFLKNQ*VLLAGQ
Trigger: TTGCCCAGCGAGCAAGACCCACTGGTTTTTGAGAAA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGGGAAAATGATGACTaGGTCATCCTCCCACATAGA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGENDD*VILPHR
Trigger: TCTATGTGGGAGGATGACCCAGTCATCATTTTCCCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGCGTTGTTGAGGGACTaGCAAAGCAATCAGCTACTA +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANALLRD*QSNQLL
Trigger: TAGTAGCTGATTGCTTTGCCAGTCCCTCAACAACGC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGCGTTGTTGAGGGACTaGCAAAGCAATCAGCTACTA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNALLRD*QSNQLL
Trigger: TAGTAGCTGATTGCTTTGCCAGTCCCTCAACAACGC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGGATACCTTACTTACTaGAAACCTGGGGTCATGCAA +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLGYLTY*KPGVMQ
Trigger: TTGCATGACCCCAGGTTTCCAGTAAGTAAGGTATCC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAATCAAGGGCAAAAACTaGTCATTAAGTCATCTGACA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKIKGKN*SLSHLT
Trigger: TGTCAGATGACTTAATGACCAGTTTTTGCCCTTGAT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGGTAGAATATCAGAGTaGGGCTGGATCAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANGRISE*GWIKGK
Trigger: TTTGCCCTTGATCCAGCCCCACTCTGATATTCTACC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTTGCTTTTAGGGAACTaGATGTGTGTATGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLLLLGN*MCVWGR
Trigger: TCTCCCCCATACACACATCCAGTTCCCTAAAAGCAA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGCGAAGTGGGCATTTaGGAAAAAGCCCTCACAAAA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGEVGI*EKALTK
Trigger: TTTTGTGAGGGCTTTTTCCCAAATGCCCACTTCGCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACATGCAATGCTTTAGGTaGCTGGACCAACAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDMQCFR*LDQQGQ
Trigger: TTGGCCCTGTTGGTCCAGCCACCTAAAGCATTGCAT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAGAGAACTTCTGTCTTaGATACCATTCATCATCTCA +
Preference number: 4 (lower is better)
Translates to: RVKDASQNRPQPGVQVASRELLS*IPFIIS
Trigger: TGAGATGATGAATGGTATCCAAGACAGAAGTTCTCT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAATGGAAGTCATGTTTaGAAAGAACAACCAACCCAA +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKNGSHV*KEQPTQ
Trigger: TTGGGTTGGTTGTTCTTTCCAAACATGACTTCCATT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCTTTGCAGACTGACCTaGGAGCAGCAGCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWLCRLT*EQQLTG
Trigger: CCCAGTGAGCTGCTGCTCCCAGGTCAGTCTGCAAAG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAAATCGGCCTCAGCCTaGTGTTCAAGTTGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQKSASA*CSSCLA
Trigger: AGCGAGGCAACTTGAACACCAGGCTGAGGCCGATTT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCGAAGATGCGCACTTTaGAGAAGATATCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNRRCAL*RRYPPG
Trigger: ACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
3UTR CAA 72 bp TCAATTGGAAGGGATGCAGCAAGTTTAGAGAAGGTGTaGGCACTAACGCTGCTTGTTTGGCAAATCATCATC +
Preference number: 4 (lower is better)
Translates to: SIGRDAASLEKV*ALTLLVWQIII
Trigger: GATGATGATTTGCCAAACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACTTGCTGCATCCCTTCCAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAGACTGCGACAAACATaGTGGTCTCATTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNRLRQT*WSHLYR
Trigger: CCTGTACAAATGAGACCATCATGTTTGTCGCAGTCT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAGTAAAGCTCCCCTCTaGGAAACCAGCCATTCAATA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNSKAPL*ETSHSI
Trigger: TATTGAATGGCTGGTTTCTCAGAGGGGAGCTTTACT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAGTAAAGCTCCCCTCTaGGAAACCAGCCATTCAATA +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGSKAPL*ETSHSI
Trigger: TATTGAATGGCTGGTTTCTCAGAGGGGAGCTTTACT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAACCATCCTGCTCTCATTaGCATTTCAACCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQPSCSH*HFNQTG
Trigger: CCCAGTCTGGTTGAAATGTCAATGAGAGCAGGATGG...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCTTAAACTCTCACAGTaGTACTTCTTGGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANLKLSQ*YFLGPT
Trigger: TGTGGGACCCAAGAAGTATCACTGTGAGAGTTTAAG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGTTTCCCCAACATCATaGAAAGATGGTTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGVSPTS*KDGSRY
Trigger: GTACCGAGAACCATCTTTGCATGATGTTGGGGAAAC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGAGGAACAAAATCCCTaGAAAAGGTCACAGACAGTG +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGEEQNP*KRSQTV
Trigger: CACTGTCTGTGACCTTTTGCAGGGATTTTGTTCCTC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGAGGAACAAAATCCCTaGAAAAGGTCACAGACAGTG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNEEQNP*KRSQTV
Trigger: CACTGTCTGTGACCTTTTGCAGGGATTTTGTTCCTC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCTCCACTACCTCAAATaGAAACACAATCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNLHYLK*KHNLCQ
Trigger: CTGGCAGAGATTGTGTTTGCATTTGAGGTAGTGGAG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAAGAGACACTCGTCATaGAATGCTTTAGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDKRHSS*NALGGW
Trigger: CCAGCCACCTAAAGCATTGCATGACGAGTGTCTCTT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCCCAATATGCAGGTGTaGTCCTACTCCAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGPNMQV*SYSKKI
Trigger: GATTTTCTTGGAGTAGGAGCACACCTGCATATTGGG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAATGAGGTTAGTGCAGTaGCGGGTCTTCCCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQMRLVQ*RVFPKL
Trigger: AAGCTTAGGGAAGACCCGGCACTGCACTAACCTCAT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGATTCCAACAGCACTTaGAAAGTACCGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQDSNST*KVPPST
Trigger: AGTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAATAAGCAAATCTCATTaGCTCATTCCTGTTTTTAGG +
Preference number: 4 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKISKSH*LIPVFR
Trigger: CCTAAAAACAGGAATGAGCCAATGAGATTTGCTTAT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAACTGGATGTGTGTATaGGGGAGAGGTATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNNWMCV*GRGIKR
Trigger: CCTCTTTATACCTCTCCCCCATACACACATCCAGTT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGGCGAAGTGGGCATTTaGGAAAAAGCCCTCACAAAA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDGEVGI*EKALTK
Trigger: TTTTGTGAGGGCTTTTTCCCAAATGCCCACTTCGCC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCACAGTGATACTTCTTaGGTCCCACATCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANHSDTS*VPHLPK
Trigger: CTTTGGAAGATGTGGGACCCAAGAAGTATCACTGTG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGTGAAAACTGCCTGCTaGGATGTCAGGTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQVKTAC*DVRLQH
Trigger: ATGCTGCAACCTGACATCCCAGCAGGCAGTTTTCAC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGACTATACCCTTGAGCTaGGGATCTTGGCGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWTIPLS*GSWRRN
Trigger: GTTGCGGCGCCAAGATCCCCAGCTCAAGGGTATAGT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376143.5
3UTR CAA 72 bp CTTTTAAACAGAATCTGGGTACCACTAGTTGATGTGTaGGTTGCTTTTAGGGAACTGGATGTGTGTATGGGG +
Preference number: 4 (lower is better)
Translates to: LLNRIWVPLVDV*VAFRELDVCMG
Trigger: CCCCATACACACATCCAGTTCCCTAAAAGCAACCAACACATCAACTAGTGGTACCCAGATTCTGTTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAGAGGCATGTACTGGTaGAATACACAGTACCGGACT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQRGMYW*NTQYRT
Trigger: AGTCCGGTACTGTGTATTTCACCAGTACATGCCTCT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCATATAAAATGGGCCTaGAGTATGCATCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGHIKWA*SMHPFP
Trigger: GGGAAATGGATGCATACTTCAGGCCCATTTTATATG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGGGGATTTTTGCAGCTaGAATGCATATACCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGGDFCS*NAYTSF
Trigger: GAAACTGGTATATGCATTTCAGCTGCAAAAATCCCC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGGGATTTTTGCAGCTaGAATGCATATACCAGTTTC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGDFCS*NAYTSF
Trigger: GAAACTGGTATATGCATTTCAGCTGCAAAAATCCCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACACCTCTAAGATGCACTaGGCATTGACAAACAGGAAA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNTSKMH*ALTNRK
Trigger: TTTCCTGTTTGTCAATGCTCAGTGCATCTTAGAGGT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACTTGCCACAAAGACACTaGAGCATATGCGTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDLPQRH*SICVPL
Trigger: CAAAGGAACGCATATGCTGCAGTGTCTTTGTGGCAA...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATGGGAGCACAGTATCTaGTACTGGACAGAGCGTATA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQWEHSI*YWTERI
Trigger: TATACGCTCTGTCCAGTAGCAGATACTGTGCTCCCA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAACTCAGCCTTAGTTTaGAGACTCAACTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGNSALV*RLNCQH
Trigger: GTGTTGACAGTTGAGTCTGCAAACTAAGGCTGAGTT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACTGTGGAAACTGTGAATaGTGGGATGGATGGAATGGA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDCGNCE*WDGWNG
Trigger: TCCATTCCATCCATCCCAGCATTCACAGTTTCCACA...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACACGGATTACTTGGCCTaGCTCATGTTATGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANTDYLA*LMLCQR
Trigger: TCTTTGACATAACATGAGGCAGGCCAAGTAATCCGT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTAGAAAGAGTGAAAGATaGTTCACAAAATCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLRKSER*FTKSAS
Trigger: TGAGGCCGATTTTGTGAAGCATCTTTCACTCTTTCT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTACAATAGTGAAAACTaGCTGCTGGGATGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNYNSEN*LLGCQV
Trigger: AACCTGACATCCCAGCAGGCAGTTTTCACTATTGTA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTACAATAGTGAAAACTaGCTGCTGGGATGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGYNSEN*LLGCQV
Trigger: AACCTGACATCCCAGCAGGCAGTTTTCACTATTGTA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAACATCATGCAAAGATaGTTCTCGGTACATGGCAAC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGNIMQR*FSVHGN
Trigger: GTTGCCATGTACCGAGAACCATCTTTGCATGATGTT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGACTCAAAAAGGATTATaGGTAGCTGTCAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGTQKGL*VAVSRQ
Trigger: TTGCCTGCTGACAGCTACCCATAATCCTTTTTGAGT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACACTCAAAAAGGATTATaGGTAGCTGTCAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANTQKGL*VAVSRQ
Trigger: TTGCCTGCTGACAGCTACCCATAATCCTTTTTGAGT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGCCTACAGAAATCTTTaGACCCACTTTCTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLAYRNL*THFLKN
Trigger: GTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACTGTATTCTGAGATCATaGCAAGGCACCTCTAACCCA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDCILRS*QGTSNP
Trigger: TGGGTTAGAGGTGCCTTGCCATGATCTCAGAATACA...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCTCCTTGAGTTTATCTaGATTCCAACAGCACTTGGA +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGLLEFI*IPTALG
Trigger: TCCAAGTGCTGTTGGAATCCAGATAAACTCAAGGAG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGGGATTAATGTCAATTaGAAGGGATGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLGINVN*KGCSKF
Trigger: AAACTTGCTGCATCCCTTCCAATTGACATTAATCCC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGATTTGGCTGGCAGCTaGGCAGTACTTTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWDLAGS*AVLCQP
Trigger: AGGCTGACAAAGTACTGCCCAGCTGCCAGCCAAATC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTACTTACTGGAAACCTaGGGTCATGCAAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGYLLET*GHAKKS
Trigger: TGACTTCTTTGCATGACCCCAGGTTTCCAGTAAGTA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTACTTACTGGAAACCTaGGGTCATGCAAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANYLLET*GHAKKS
Trigger: TGACTTCTTTGCATGACCCCAGGTTTCCAGTAAGTA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTAATGCATGTGAAATCTaGCTTGGCTCAGAATATCCT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLNACEI*LGSEYP
Trigger: AGGATATTCTGAGCCAAGCCAGATTTCACATGCATT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAGGTTCTTGTCATTGTaGGAAGTGCATTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGRFLSL*EVHLFC
Trigger: GCAGAACAAATGCACTTCCCACAATGACAAGAACCT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACAGGTTCTTGTCATTGTaGGAAGTGCATTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANRFLSL*EVHLFC
Trigger: GCAGAACAAATGCACTTCCCACAATGACAAGAACCT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCACAGTGATACTTCTTaGGTCCCACATCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDHSDTS*VPHLPK
Trigger: CTTTGGAAGATGTGGGACCCAAGAAGTATCACTGTG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACACATTAGTAATGGAATaGGCAACTGACAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNTLVME*ATDKGA
Trigger: GGCACCTTTGTCAGTTGCCCATTCCATTACTAATGT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACACATTAGTAATGGAATaGGCAACTGACAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANTLVME*ATDKGA
Trigger: GGCACCTTTGTCAGTTGCCCATTCCATTACTAATGT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp AATCTTCATTGTGTAGTCAACTGTTCCTGGCCTTTCTaGGTAGTTGTCTTCCCTAAGCTCAAACAAACAGTG +
Preference number: 4 (lower is better)
Translates to: NLHCVVNCSWPF*VVVFPKLKQTV
Trigger: CACTGTTTGTTTGAGCTTAGGGAAGACAACTACCAAGAAAGGCCAGGAACAGTTGACTACACAATGAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCCAAAGAAACCACATTaGTTTGGGCGAAAAGCAATC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDPKKPH*FGRKAI
Trigger: GATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACACACATAGATTTCGCTaGAACAGGACTCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNTHRFR*NRTQKG
Trigger: TCCTTTTTGAGTCCTGTTTCAGCGAAATCTATGTGT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCAAAATCCTCATGGATaGATGTGTTGGTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGQNPHG*MCWFAF
Trigger: AAAGGCAAACCAACACATTCATCCATGAGGATTTTG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCATATAAAATGGGCCTaGAGTATGCATCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDHIKWA*SMHPFP
Trigger: GGGAAATGGATGCATACTTCAGGCCCATTTTATATG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGAATGGAAATGCATGTaGAATCTGGCTTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQEWKCM*NLAWLR
Trigger: TCTGAGCCAAGCCAGATTTCACATGCATTTCCATTC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTCTACCAAGGATGAATaGAATGATTTCATTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLSTKDE*NDFIVD
Trigger: GTCCACAATGAAATCATTTCATTCATCCTTGGTAGA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTATGCCACTAATTGTTTaGAAGATTAGATGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLMPLIV*KIRCLA
Trigger: TGCGAGACATCTAATCTTTCAAACAATTAGTGGCAT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGTGCATTTGTTCTGCTaGAGAGTGGTATATTTCTGG +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDVHLFC*RVVYFW
Trigger: CCAGAAATATACCACTCTTCAGCAGAACAAATGCAC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACACTTTTACCTTTGGATaGTGGGTTATTAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNTFTFG*WVIRSL
Trigger: CAGGCTTCTAATAACCCATCATCCAAAGGTAAAAGT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGAAAGCTGTTTAGACTaGGAGAACTTCTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDESCLD*ENFCLG
Trigger: TCCAAGACAGAAGTTCTCTCAGTCTAAACAGCTTTC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACACTGCACTCTTACTTTaGGAAGTGTGTCAAGAAATG +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANTALLL*EVCQEM
Trigger: CATTTCTTGACACACTTCTCAAAGTAAGAGTGCAGT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACAGATGCACTGAGCATTaGCAAACAGGAAAGAATAAC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANRCTEH*QTGKNN
Trigger: GTTATTCTTTCCTGTTTGTCAATGCTCAGTGCATCT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAACTTAAACTCTCACAGTaGTACTTCTTGGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQLKLSQ*YFLGPT
Trigger: TGTGGGACCCAAGAAGTATCACTGTGAGAGTTTAAG...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGCCTCCATTCATTATTaGAGACGCACTTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDASIHY*RRTCAF
Trigger: AAAAGCACAAGTGCGTCTGCAATAATGAATGGAGGC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCTTCATAGGGATAAATaGCCTTATAGACACCCCATA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNLHRDK*PYRHPI
Trigger: TATGGGGTGTCTATAAGGGCATTTATCCCTATGAAG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCACACCAGATATGCATaGAGAAGGAATGGAGTATTA +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGHTRYA*RRNGVL
Trigger: TAATACTCCATTCCTTCTGCATGCATATCTGGTGTG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATGTGATGACAGAGACTaGGACAAACATGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQCDDRD*DKHDGL
Trigger: GAGACCATCATGTTTGTCGCAGTCTCTGTCATCACA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACAATGAGCTGCTGGTTTaGTTTTCTTTACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANNELLV*FSLLCS
Trigger: GGAACAGAGTAAAGAAAACCAAACCAGCAGCTCATT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGCCTACAGAAATCTTTaGACCCACTTTCTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANAYRNL*THFLKN
Trigger: GTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATGTATTCTGAGATCATaGCAAGGCACCTCTAACCCA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQCILRS*QGTSNP
Trigger: TGGGTTAGAGGTGCCTTGCCATGATCTCAGAATACA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGTAGTCAACTGTTCCTaGCCTTTCTTGGTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQVVNCS*PFLVVV
Trigger: GACAACTACCAAGAAAGGCCAGGAACAGTTGACTAC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGCTCTTTACATAGGGTaGAGAATTGTCATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGALYIG*RIVMSS
Trigger: AGAAGACATGACAATTCTCCACCCTATGTAAAGAGC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAGACCATGTACATCCTaGATTTTGATATGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNRPCTS*ILICLH
Trigger: ATGCAGGCATATCAAAATCCAGGATGTACATGGTCT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGGGATTAATGTCAATTaGAAGGGATGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGGINVN*KGCSKF
Trigger: AAACTTGCTGCATCCCTTCCAATTGACATTAATCCC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCACCCAAAAGTCATTTaGCAACATCTACAGACAATT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLHPKVI*QHLQTI
Trigger: AATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATCTTCACGGATTACTTaGCCTGCCTCATGTTATGTC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQSSRIT*PASCYV
Trigger: GACATAACATGAGGCAGGCCAAGTAATCCGTGAAGA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAACTGGATGTGTGTATaGGGGAGAGGTATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQNWMCV*GRGIKR
Trigger: CCTCTTTATACCTCTCCCCCATACACACATCCAGTT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTATGAAAGTTTTTGCCTaGAGATACATCACAGATAGG +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLMKVFA*RYITDR
Trigger: CCTATCTGTGATGTATCTCCAGGCAAAAACTTTCAT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATGTGTTTGTGTGAAGTaGAGTGTTGCTGCTGTAAGT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQCVCVK*SVAAVS
Trigger: ACTTACAGCAGCAACACTTCACTTCACACAAACACA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCAACTGTCAACACTTTaGAACCCTACTCCATATTCA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDQLSTL*NPTPYS
Trigger: TGAATATGGAGTAGGGTTTCAAAGTGTTGACAGTTG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAAGAGAGGCACAATTTaGCCCATGTTATGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDKRGTI*PMLWKK
Trigger: TTTCTTCCATAACATGGGTCAAATTGTGCCTCTCTT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTGGATTGAATCAGAGTaGAGTCTTCAGTTAACTGTT +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNWIESE*SLQLTV
Trigger: AACAGTTAACTGAAGACTTCACTCTGATTCAATCCA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGATTATATCTTTGCCTTaGCTACTTCAAGCTAGATCC +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGIISLP*LLQARS
Trigger: GGATCTAGCTTGAAGTAGTCAAGGCAAAGATATAAT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTAAACACAAACTACAATaGAGACAGACAAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLKHKLQ*RQTNSL
Trigger: CAAAGAGTTTGTCTGTCTGCATTGTAGTTTGTGTTT...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACATCTCTTTAAGCCACTaGTACCCAAAAACATTCAGG +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDISLSH*YPKTFR
Trigger: CCTGAATGTTTTTGGGTAGCAGTGGCTTAAAGAGAT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAATGATAAAGAACTTCTaGTTGCTCCCCAAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQMIKNF*LLPKRQ
Trigger: TTGCCTCTTGGGGAGCAAGCAGAAGTTCTTTATCAT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAACTCAGCCTTAGTTTaGAGACTCAACTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQNSALV*RLNCQH
Trigger: GTGTTGACAGTTGAGTCTGCAAACTAAGGCTGAGTT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCTGTTTTTAGGAAGTTaGAGTGGGATTAATGTCAAT +
Preference number: 4 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLLFLGS*SGINVN
Trigger: ATTGACATTAATCCCACTGCAACTTCCTAAAAACAG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAACGGATTACTTGGCCTaGCTCATGTTATGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQTDYLA*LMLCQR
Trigger: TCTTTGACATAACATGAGGCAGGCCAAGTAATCCGT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGATTAAGTTAGACCTTTaGTTTCTGCCCATCCTTACT +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGIKLDL*FLPILT
Trigger: AGTAAGGATGGGCAGAAAGCAAAGGTCTAACTTAAT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCAATCTTCTTACAGATaGTGTTGTGTGACAATGGCT +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDQSSYR*CCVTMA
Trigger: AGCCATTGTCACACAACAGCATCTGTAAGAAGATTG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGAAACCACATTGATTTaGGCGAAAAGCAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQETTLI*AKSNPA
Trigger: TGCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTTTTCACTCCCTGGATaGCAACAACACGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWFSLPG*QQHVVP
Trigger: TGGGACTACGTGTTGTTGCCATCCAGGGAGTGAAAA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAACCTTCTCCATTCATaGCTATATACAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNNLLHS*LYTTLF
Trigger: AAACAGGGTTGTATATAGCCATGAATGGAGAAGGTT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAACACCTGTGAGGATCTaGCTATGTTGTCTTACTCTT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQTPVRI*LCCLTL
Trigger: AAGAGTAAGACAACATAGCCAGATCCTCACAGGTGT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTTTCTCAAAAACCAGTaGGTCTTGCTCGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWFLKNQ*VLLAGQ
Trigger: TTGCCCAGCGAGCAAGACCCACTGGTTTTTGAGAAA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAATACTGTGATAAAATaGCACCAATCTCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNNTVIK*HQSQKL
Trigger: GAGCTTCTGAGATTGGTGCCATTTTATCACAGTATT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCACCCAAAAGTCATTTaGCAACATCTACAGACAATT +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANHPKVI*QHLQTI
Trigger: AATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCTTTTAAACAGAATCTaGGTACCACTAGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNLLNRI*VPLVDV
Trigger: CACATCAACTAGTGGTACCCAGATTCTGTTTAAAAG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCTTTTAAACAGAATCTaGGTACCACTAGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: VYVCVCVCMCGFDASNANLLNRI*VPLVDV
Trigger: CACATCAACTAGTGGTACCCAGATTCTGTTTAAAAG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAATGGAAGTCATGTTTaGAAAGAACAACCAACCCAA +
Preference number: 4 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGNGSHV*KEQPTQ
Trigger: TTGGGTTGGTTGTTCTTTCCAAACATGACTTCCATT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGGTAAAGGGGGAAATTaGGTTTACCAACTTATTTAC +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDGKGGN*VYQLIY
Trigger: GTAAATAAGTTGGTAAACTCAATTTCCCCCTTTACC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGTACATCCTGGATTTTaGTATGCCTGCATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQVHPGF*YACILE
Trigger: TTCCAAAATGCAGGCATATCAAAATCCAGGATGTAC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGTGTATGTGTGGTTTTaGTGCCAGCAATGCAAACAC +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWVYVWF*CQQCKH
Trigger: GTGTTTGCATTGCTGGCATCAAAACCACACATACAC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTTAATATGGGGACAATaGAGACAAGCACACAGGAGG +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWLIWGQ*RQAHRR
Trigger: CCTCCTGTGTGCTTGTCTTCATTGTCCCCATATTAA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAACTTTGGGAGTAATTTaGGCTATCCCAGTTTATGAC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQTLGVI*AIPVYD
Trigger: GTCATAAACTGGGATAGCTCAAATTACTCCCAAAGT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAGATGCACTGAGCATTaGCAAACAGGAAAGAATAAC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQRCTEH*QTGKNN
Trigger: GTTATTCTTTCCTGTTTGTCAATGCTCAGTGCATCT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAAAAGAAGAGTGGATTaGATCAGAGTGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDKRRVD*IRVKSS
Trigger: TGAAGACTTCACTCTGATTCAATCCACTCTTCTTTT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATGTTCAGTTCCATTTTaGTCTTTACATAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQCSVPF*SLHRVE
Trigger: CTCCACCCTATGTAAAGAGCAAAATGGAACTGAACA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAATCTCTTTAAGCCACTaGTACCCAAAAACATTCAGG +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQISLSH*YPKTFR
Trigger: CCTGAATGTTTTTGGGTAGCAGTGGCTTAAAGAGAT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCTTACTCTTGTTGACTaGTTTGCCTCCATTCATTAT +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDLTLVD*FASIHY
Trigger: ATAATGAATGGAGGCAAACCAGTCAACAAGAGTAAG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCACAGTATCTGCTACTaGACAGAGCGTATATGTGTG +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWHSICY*TERICV
Trigger: CACACATATACGCTCTGTCCAGTAGCAGATACTGTG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAGACCATGTACATCCTaGATTTTGATATGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQRPCTS*ILICLH
Trigger: ATGCAGGCATATCAAAATCCAGGATGTACATGGTCT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAGAGAACTTCTGTCTTaGATACCATTCATCATCTCA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDRELLS*IPFIIS
Trigger: TGAGATGATGAATGGTATCCAAGACAGAAGTTCTCT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGCAAACATTTAATTTaGACTTTGGGGATTTTTGCA +
Preference number: 4 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGKHLI*TLGIFA
Trigger: TGCAAAAATCCCCAAAGTCCAAATTAAATGTTTGCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGCATGCAAATCAACCTaGACCCTCAGGAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWACKST*TLRKTS
Trigger: ACTTGTTTTCCTGAGGGTCCAGGTTGATTTGCATGC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGAAAATGCTCTACTATaGCATGAAGCTAAGCATTCC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQENALL*HEAKHS
Trigger: GGAATGCTTAGCTTCATGCCATAGTAGAGCATTTTC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGTCCATAAGCCCATTTaGCTGTATTACAAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQVHKPI*LYYKLV
Trigger: AACTAACTTGTAATACAGTCAAATGGGCTTATGGAC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGGTAAAGGGGGAAATTaGGTTTACCAACTTATTTAC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQGKGGN*VYQLIY
Trigger: GTAAATAAGTTGGTAAACTCAATTTCCCCCTTTACC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATCTACCAAGGATGAATaGAATGATTTCATTGTGGAC +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQSTKDE*NDFIVD
Trigger: GTCCACAATGAAATCATTTCATTCATCCTTGGTAGA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGGCAAATATACTGAGTaGCTGTATGCATTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQGKYTE*LYAFLA
Trigger: TGCTAAAAATGCATACAGTCACTCAGTATATTTGCC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAGACACTGCAGCATATaGGTTCCTTTGCTGAAAATG +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWRHCSI*VPLLKM
Trigger: CATTTTCAGCAAAGGAACGCATATGCTGCAGTGTCT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAGTAGTAGCCTTGCCTaGAATATAACCTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWSSSLA*NITWSL
Trigger: TAGTGACCAGGTTATATTGCAGGCAAGGCTACTACT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAATTAAGTTAGACCTTTaGTTTCTGCCCATCCTTACT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQIKLDL*FLPILT
Trigger: AGTAAGGATGGGCAGAAAGCAAAGGTCTAACTTAAT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAACCTTCTCCATTCATaGCTATATACAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQNLLHS*LYTTLF
Trigger: AAACAGGGTTGTATATAGCCATGAATGGAGAAGGTT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAATCAAGGGCAAAAACTaGTCATTAAGTCATCTGACA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQIKGKN*SLSHLT
Trigger: TGTCAGATGACTTAATGACCAGTTTTTGCCCTTGAT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACATGAAATACTCCATGTaGTCTTTGTTGGCAGATATA +
Preference number: 4 (lower is better)
Translates to: SITALILLLRIRKLNFTDMKYSM*SLLADI
Trigger: TATATCTGCCAACAAAGACCACATGGAGTATTTCAT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp CTTTGTATGCAAATTAGCAATACATACCAACAGTTCTaGATACACAGGTACCTACTACATGCAGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: LCMQISNTYQQF*IHRYLLHAAHH
Trigger: ATGATGAGCTGCATGTAGTAGGTACCTGTGTATCAAGAACTGTTGGTATGTATTGCTAATTTGCATACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp GATATGCATGCAGAAGGAATGGAGTATTATAGAGACTaGATACAATGGACATATGCACATGGAGGTACAAAA +
Preference number: 4 (lower is better)
Translates to: DMHAEGMEYYRD*IQWTYAHGGTK
Trigger: TTTTGTACCTCCATGTGCATATGTCCATTGTATCAAGTCTCTATAATACTCCATTCCTTCTGCATGCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCAAAATCCTCATGGATaGATGTGTTGGTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWQNPHG*MCWFAF
Trigger: AAAGGCAAACCAACACATTCATCCATGAGGATTTTG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCAACTGTCAACACTTTaGAACCCTACTCCATATTCA +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWQLSTL*NPTPYS
Trigger: TGAATATGGAGTAGGGTTTCAAAGTGTTGACAGTTG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCCGTGTCATAGCCACTaGTATCCTAATTTATTGAGT +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWPCHSH*YPNLLS
Trigger: ACTCAATAAATTAGGATAGCAGTGGCTATGACACGG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAATACAAATGACCTTTaGATTTCTCTATCACGGCGC +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWNTNDL*ISLSRR
Trigger: GCGCCGTGATAGAGAAATCCAAAGGTCATTTGTATT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAATGAAATACTCCATGTaGTCTTTGTTGGCAGATATA +
Preference number: 4 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQMKYSM*SLLADI
Trigger: TATATCTGCCAACAAAGACCACATGGAGTATTTCAT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR TCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTTCTCTGATAGTCAATaGAATACTCCATGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWFSDSQ*NTPCGL
Trigger: AAGACCACATGGAGTATTTCATTGACTATCAGAGAA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAATACTGTGATAAAATaGCACCAATCTCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWNTVIK*HQSQKL
Trigger: GAGCTTCTGAGATTGGTGCCATTTTATCACAGTATT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
3UTR CAA 72 bp AGTGTGTCAAGAAATGGCAAACATTTAATTTGGACTTaGGGGATTTTTGCAGCTGAAATGCATATACCAGTT +
Preference number: 4 (lower is better)
Translates to: SVSRNGKHLIWT*GIFAAEMHIPV
Trigger: AACTGGTATATGCATTTCAGCTGCAAAAATCCCCAAAGTCCAAATTAAATGTTTGCCATTTCTTGACACACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGAAACACAAACTACAATaGAGACAGACAAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWKHKLQ*RQTNSL
Trigger: CAAAGAGTTTGTCTGTCTGCATTGTAGTTTGTGTTT...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR GCA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCTGTTTTTAGGAAGTTaGAGTGGGATTAATGTCAAT +
Preference number: 4 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWLFLGS*SGINVN
Trigger: ATTGACATTAATCCCACTGCAACTTCCTAAAAACAG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS CCA 90 bp ATGCGCCCAGGGCGCAGCCGGACGATCCCGGGAAGCCGGACGTCGTaGCCGCCGCCGCTTGGCCACGTCCGAGTGGAGAGCGGGACCGCG +
Preference number: 5 (lower is better)
Translates to: MRPGRSRTIPGSRTS*PPPLGHVRVESGTA
Trigger: CGCGGTCCCGCTCTCCACTCGGACGTGGCCAAGCGGCGGCGGCCACGACGTCCGGCTTCCCGGGATCGTCCGGCTGCGCCCTGGGCGCAT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 90 bp CGCCTCCTGCTGGCAGACGGCCGGTCCCAGTGCTGCTCCCGCGCCTaGCGCTTCTGGCGGATCAAGCCGCTAGCGATGGCCGCGGCCATG +
Preference number: 5 (lower is better)
Translates to: RLLLADGRSQCCSRA*RFWRIKPLAMAAAM
Trigger: CATGGCCGCGGCCATCGCTAGCGGCTTGATCCGCCAGAAGCGGCAGGCGCGGGAGCAGCACTGGGACCGGCCGTCTGCCAGCAGGAGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CCA 90 bp CGTTGCAGAGCCCGCGGTTCTTGCTGGGGCTGCTCCGCCTCCTGCTaGCAGACGGCCGGTCCCAGTGCTGCTCCCGCGCCTGCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: RCRARGSCWGCSASC*QTAGPSAAPAPAAS
Trigger: AGAAGCGGCAGGCGCGGGAGCAGCACTGGGACCGGCCGTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 90 bp TATCCACCAGGTTGCCGTTGCAGAGCCCGCGGTTCTTGCTGGGGCTaGTCCGCCTCCTGCTGGCAGACGGCCGGTCCCAGTGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: YPPGCRCRARGSCWG*SASCWQTAGPSAAP
Trigger: GGGAGCAGCACTGGGACCGGCCGTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 90 bp TGGAGAAGATATCCACCAGGTTGCCGTTGCAGAGCCCGCGGTTCTTaGTGGGGCTGCTCCGCCTCCTGCTGGCAGACGGCCGGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: WRRYPPGCRCRARGS*WGCSASCWQTAGPS
Trigger: ACTGGGACCGGCCGTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CCA 90 bp AGAAGATATCCACCAGGTTGCCGTTGCAGAGCCCGCGGTTCTTGCTaGGGCTGCTCCGCCTCCTGCTGGCAGACGGCCGGTCCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: RRYPPGCRCRARGSC*GCSASCWQTAGPSA
Trigger: AGCACTGGGACCGGCCGTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 90 bp GGCCGAAGATGCGCACTTTGGAGAAGATATCCACCAGGTTGCCGTTaGAGAGCCCGCGGTTCTTGCTGGGGCTGCTCCGCCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GRRCALWRRYPPGCR*RARGSCWGCSASCW
Trigger: CCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACGTGGCCGCCGCCGCTaGGCCACGTCCGAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKRGRRR*ATSEWR
Trigger: TCTCCACTCGGACGTGGCCAAGCGGCGGCGGCCACG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACAGAGCCCGCGGTTCTaGCTGGGGCTGCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKQSPRF*LGLLRL
Trigger: GAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTCCACCAGGTTGCCGTaGCAGAGCCCGCGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGSTRLP*QSPRFL
Trigger: CAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCAGCTGGGCAGTACTTaGTCAGCCTCAGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGQLGST*SASAPL
Trigger: CAGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAAGATATCCACCAGGTaGCCGTTGCAGAGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKKISTR*PLQSPR
Trigger: CCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 90 bp TTACTTGGCGTCACCCCAGGCTTCGGGACCGTTTCCCCAACATCATaGAAAGATGGTTCTCGGTACATGGCAACTTCCAATGGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LLGVTPGFGTVSPTS*KDGSRYMATSNGLG
Trigger: ACCCAAGCCATTGGAAGTTGCCATGTACCGAGAACCATCTTTGCATGATGTTGGGGAAACGGTCCCGAAGCCTGGGGTGACGCCAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACAGCTGGGCAGTACTTaGTCAGCCTCAGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKQLGST*SASAPL
Trigger: CAGTGGAGCTGAGGCTGACAAAGTACTGCCCAGCTG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCCCATCCTGCTCTCATaGACATTTCAACCAGACTGG +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGPILLS*TFQPDW
Trigger: CCAGTCTGGTTGAAATGTCAATGAGAGCAGGATGGG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACTGGTCACTATACCCTaGAGCTGGGGATCAGTTGGG +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKLVTIP*SWGSVG
Trigger: CCCAACTGATCCCCAGCTCAAGGGTATAGTGACCAG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACACTTGTGCTTTTACTaGGCGTCACCCCAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKHLCFY*ASPQAS
Trigger: CGAAGCCTGGGGTGACGCCAAGTAAAAGCACAAGTG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTGTTCCTGGCCTTTCTaGGTAGTTGTCTTCCCTAAG +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGCSWPF*VVVFPK
Trigger: CTTAGGGAAGACAACTACCAAGAAAGGCCAGGAACA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGGATTCCAACAGCACTaGGAAAGTACCGCCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKGFQQH*ESTALH
Trigger: GTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATCC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCTCTTCACGGATTACTaGGCCTGCCTCATGTTATGT +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGLFTDY*ACLMLC
Trigger: ACATAACATGAGGCAGGCCAAGTAATCCGTGAAGAG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTCTTGGCCAGCTGAGTaGAACCATTTCTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGSWPAE*NHFSPL
Trigger: AAGAGGTGAGAAATGGTTCAACTCAGCTGGCCAAGA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCCCCACTGGTATGAGGTaGAAGAGTGTAGAATTAGTG +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGPTGMR*KSVELV
Trigger: CACTAATTCTACACTCTTCAACCTCATACCAGTGGG...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGAAAAACCAGTGGGTCTaGCTCGCTGGGCAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: RVKDASQNRPQPGVQVASKNQWV*LAGQGK
Trigger: TTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCTTGAGCTGGGGATCTaGGCGCCGCAACCTGCGCTT +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGLELGI*APQPAL
Trigger: AAGCGCAGGTTGCGGCGCCAAGATCCCCAGCTCAAG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTATGTTGTCTTACTCTaGTTGACTGGTTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGYVVLL*LTGLPP
Trigger: TGGAGGCAAACCAGTCAACAAGAGTAAGACAACATA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAACATGCAGCTCATCATaGCTGTCCTCTTCCCATGCT +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKTCSSS*LSSSHA
Trigger: AGCATGGGAAGAGGACAGCAATGATGAGCTGCATGT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCACTTGTGCTTTTACTaGGCGTCACCCCAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLHLCFY*ASPQAS
Trigger: CGAAGCCTGGGGTGACGCCAAGTAAAAGCACAAGTG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCAGGCAATGCCGACCTaGGGAGCACAGTATCTGCTA +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLQAMPT*GAQYLL
Trigger: TAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCTG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTGGAGCGGGAGTCCTTaGGACCCATCGTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNWSGSP*DPSWIS
Trigger: AGAGATCCACGATGGGTCCAAAGGACTCCCGCTCCA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCGTTATTAGAAGCCTGTaGTCAGTGTGTCAACGATAT +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGVIRSL*SVCQRY
Trigger: ATATCGTTGACACACTGACAACAGGCTTCTAATAAC...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATGGGCCATGGGACATTaGTTCAAGGCTAATTGCAAC +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKWAMGH*FKANCN
Trigger: GTTGCAATTAGCCTTGAACAAATGTCCCATGGCCCA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGGGAACCAGCATCCTTaGCAGACTGACCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGGNQHP*QTDLGA
Trigger: TGCTCCCAGGTCAGTCTGCAAAGGATGCTGGTTCCC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCTGGTCACTATACCCTaGAGCTGGGGATCTTGGCGC +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANLVTIP*SWGSWR
Trigger: GCGCCAAGATCCCCAGCTCAAGGGTATAGTGACCAG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 90 bp CTATGTTGTCTTACTCTTGTTGACTGGTTTGCCTCCATTCATTATTaGAGACGCACTTGTGCTTTTACTTGGCGTCACCCCAGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: LCCLTLVDWFASIHY*RRTCAFTWRHPRLR
Trigger: CCGAAGCCTGGGGTGACGCCAAGTAAAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGAGTAAGACAACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAGAAACCACATTGATTaGGGCGAAAAGCAATCCAGC +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKRNHID*GEKQSS
Trigger: GCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTCT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATTATTGCAGACGCACTaGTGCTTTTACTTGGCGTCA +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKLLQTH*CFYLAS
Trigger: TGACGCCAAGTAAAAGCACAAGTGCGTCTGCAATAA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATGCCTCCATTCATTATaGCAGACGCACTTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKCLHSL*QTHLCF
Trigger: AAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCA...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCAGGCAATGCCGACCTaGGGAGCACAGTATCTGCTA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGQAMPT*GAQYLL
Trigger: TAGCAGATACTGTGCTCCCAAGGTCGGCATTGCCTG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGGATTCCAACAGCACTaGGAAAGTACCGCCCTCCAC +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNGFQQH*ESTALH
Trigger: GTGGAGGGCGGTACTTTCCAAGTGCTGTTGGAATCC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGTCTTTCTGGGCTCCTaGAGTTTATCTGGATTCCAA +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKVFLGS*SLSGFQ
Trigger: TTGGAATCCAGATAAACTCAAGGAGCCCAGAAAGAC...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAGTTTAGAGAAGGTGTaGGCACTAACGCTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKSLEKV*ALTLLV
Trigger: AACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGCTCCCAGGCCATACAAAAGCAACTTAAGGGTGGATTTGGCTGGCAGCTGGGCTGTTTTGTAGCAATTTaGATGACGTATTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: SSQAIQKQLKGGFGWQLGCFVAI*MTYSLM
Trigger: CATCAGCGAATACGTCATCAAAATTGCTACAAAACA...GCCCAGCTGCCAGCCAAATCCACCCTTAAGTTGCTTTTGTATGGCCTGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACGGGAACCAGCATCCTTaGCAGACTGACCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SITALILLLRIRKLNFTDGNQHP*QTDLGA
Trigger: TGCTCCCAGGTCAGTCTGCAAAGGATGCTGGTTCCC...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAACCATTTCTCACCTCTaGATAGTCATGCAGCCTACA +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKTISHL*IVMQPT
Trigger: TGTAGGCTGCATGACTATCAAGAGGTGAGAAATGGT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTCCATCGGGGTGCATTaGCAAGTAGTAGCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNSIGVH*QVVALP
Trigger: AGGCAAGGCTACTACTTGCAAATGCACCCCGATGGA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGCATGGAATCTTCATaGTGTAGTCAACTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RVKDASQNRPQPGVQVASCMESS*CSQLFL
Trigger: CAGGAACAGTTGACTACACAATGAAGATTCCATGCA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATGGAGCGGGAGTCCTTaGGACCCATCGTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQWSGSP*DPSWIS
Trigger: AGAGATCCACGATGGGTCCAAAGGACTCCCGCTCCA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGCATGTGAAATCTGGCTaGGCTCAGAATATCCTTAAC +
Preference number: 5 (lower is better)
Translates to: RVKDASQNRPQPGVQVASHVKSG*AQNILN
Trigger: GTTAAGGATATTCTGAGCCAAGCCAGATTTCACATG...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTTCAGGTTCTTGTCATaGTGGGAAGTGCATTTGTTC +
Preference number: 5 (lower is better)
Translates to: RVKDASQNRPQPGVQVASFRFLS*WEVHLF
Trigger: GAACAAATGCACTTCCCACAATGACAAGAACCTGAA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACAGCCTGGTGTTCAAGTaGCCTCGCTCAATATGCCTG +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNSLVFK*PRSICL
Trigger: CAGGCATATTGAGCGAGGCAACTTGAACACCAGGCT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACCCGAAGATGCGCACTTaGGAGAAGATATCCACCAGG +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANPKMRT*EKISTR
Trigger: CCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCGG...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTTAGTGCTGTCATCCTaGGTTCCATCGAGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGLVLSS*VPSRAP
Trigger: TGGAGCTCTCGATGGAACCAAGGATGACAGCACTAA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGAGAGCTTCCCTGGATaGTGTTTGAGCCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGESFPG*CLSHFP
Trigger: TGGGAAATGGCTCAAACACAATCCAGGGAAGCTCTC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACAAGAGGCCAGTACATaGATCCCACATATAATTTTC +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKQEAST*IPHIIF
Trigger: GAAAATTATATGTGGGATCAATGTACTGGCCTCTTG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACACATGCAGCTCATCATaGCTGTCCTCTTCCCATGCT +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANTCSSS*LSSSHA
Trigger: AGCATGGGAAGAGGACAGCAATGATGAGCTGCATGT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAACATACCAACAGTTCTaGATACACAGGTACCTACTA +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKTYQQF*IHRYLL
Trigger: TAGTAGGTACCTGTGTATCAAGAACTGTTGGTATGT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTGTACATCCTGGATTTaGATATGCCTGCATTTTGGA +
Preference number: 5 (lower is better)
Translates to: RVKDASQNRPQPGVQVASCTSWI*ICLHFG
Trigger: TCCAAAATGCAGGCATATCAAAATCCAGGATGTACA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAACTTAAGGGTGGATTaGGCTGGCAGCTGGGCAGTA +
Preference number: 5 (lower is better)
Translates to: SITALILLLRIRKLNFTDNLRVD*AGSWAV
Trigger: TACTGCCCAGCTGCCAGCCAAATCCACCCTTAAGTT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGAGGCGAAGTGGGCATTaGGGAAAAAGCCCTCACAAA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGRRSGH*GKSPHK
Trigger: TTTGTGAGGGCTTTTTCCCAAATGCCCACTTCGCCT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGTACTCCATGTGGTCTTaGTTGGCAGATATATCACTA +
Preference number: 5 (lower is better)
Translates to: RVKDASQNRPQPGVQVASYSMWS*LADISL
Trigger: TAGTGATATATCTGCCAACAAAGACCACATGGAGTA...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTCTTGGCCAGCTGAGTaGAACCATTTCTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLSWPAE*NHFSPL
Trigger: AAGAGGTGAGAAATGGTTCAACTCAGCTGGCCAAGA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCGCAACCTGCGCTTCTaGAGGCCGAAGATGCGCACT +
Preference number: 5 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWRNLRF*RPKMRT
Trigger: AGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGCG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS TCA 90 bp AGTCACAACACCTGTGAGGATCTGGCTATGTTGTCTTACTCTTGTTaGCTGGTTTGCCTCCATTCATTATTGCAGACGCACTTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SHNTCEDLAMLSYSC*LVCLHSLLQTHLCF
Trigger: AAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGAGTAAGACAACATAGCCAGATCCTCACAGGTGTTGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp AGAGTGAAAGATGCTTCACAAAATCGGCCTCAGCCTGGTGTTCAAGTTGCCTCGACGTGGTATATTTCTTaGAGACTTCTCAGTGATTGT +
Preference number: 5 (lower is better)
Translates to: RVKDASQNRPQPGVQVASTWYIS*RLLSDC
Trigger: ACAATCACTGAGAAGTCTCAAAGAAATATACCACGT...CGAGGCAACTTGAACACCAGGCTGAGGCCGATTTTGTGAAGCATCTTTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAAAAACCAGTGGGTCTaGCTCGCTGGGCAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQKNQWV*LAGQGK
Trigger: TTTGCCTTGCCCAGCGAGCAAGACCCACTGGTTTTT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTGTTCCTGGCCTTTCTaGGTAGTTGTCTTCCCTAAG +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGCSWPF*VVVFPK
Trigger: CTTAGGGAAGACAACTACCAAGAAAGGCCAGGAACA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACAGGCGAAGTGGGCATTaGGGAAAAAGCCCTCACAAA +
Preference number: 5 (lower is better)
Translates to: SITALILLLRIRKLNFTDRRSGH*GKSPHK
Trigger: TTTGTGAGGGCTTTTTCCCAAATGCCCACTTCGCCT...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTGGGCCATGGGACATTaGTTCAAGGCTAATTGCAAC +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNWAMGH*FKANCN
Trigger: GTTGCAATTAGCCTTGAACAAATGTCCCATGGCCCA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCCCATCCTGCTCTCATaGACATTTCAACCAGACTGG +
Preference number: 5 (lower is better)
Translates to: SITALILLLRIRKLNFTDPILLS*TFQPDW
Trigger: CCAGTCTGGTTGAAATGTCAATGAGAGCAGGATGGG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAACATTTAATTTGGACTTaGGGGATTTTTGCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKHLIWT*GIFAAE
Trigger: TTCAGCTGCAAAAATCCCCAAAGTCCAAATTAAATG...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GGAACAAAATCCCTGCAAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAAAAAGAAGAGTGGATaGAATCAGAGTGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: GTKSLQKVTDSGASSPVKKKKSG*NQSEVF
Trigger: GAAGACTTCACTCTGATTCAATCCACTCTTCTTTTT...TTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTTGCAGGGATTTTGTTCC
44% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAGCCTGGTGTTCAAGTaGCCTCGCTCAATATGCCTG +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQSLVFK*PRSICL
Trigger: CAGGCATATTGAGCGAGGCAACTTGAACACCAGGCT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS TCA 90 bp CAGCATATGCGTTCCTTTGCTGAAAATGTTCCAAAGAAACCACATTaGTTTGGGCGAAAAGCAATCCAGCAGCTTAGACACCCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: QHMRSFAENVPKKPH*FGRKAIQQLRHPEK
Trigger: TTTCTCAGGGTGTCTAAGCTGCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGGAACGCATATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS TCA 90 bp ATAAATCACTCAACTGTGCTCAGGACGAATAAGTCACAACACCTGTaGGGATCTGGCTATGTTGTCTTACTCTTGTTGACTGGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: INHSTVLRTNKSQHL*GSGYVVLLLLTGLP
Trigger: AGGCAAACCAGTCAACAAGAGTAAGACAACATAGCCAGATCCTCACAGGTGTTGTGACTTATTCGTCCTGAGCACAGTTGAGTGATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS TCA 90 bp CAGCATATGCGTTCCTTTGCTGAAAATGTTCCAAAGAAACCACATTaGTTTGGGCGAAAAGCAATCCAGCAGCTTAGACACCCAATACCA +
Preference number: 5 (lower is better)
Translates to: QHMRSFAENVPKKPH*FGRKAIQQLRHPIP
Trigger: TGGTATTGGGTGTCTAAGCTGCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGGAACGCATATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418923.2
CDS CCA 90 bp ACAACACCTGTGAGGATCTGGCTATGTTGTCTTACTCTTGTTGACTaGTTTGCCTCCATTCATTATTGCAGACGCACTTGTGCTTTTACT +
Preference number: 5 (lower is better)
Translates to: TTPVRIWLCCLTLVD*FASIHYCRRTCAFT
Trigger: AGTAAAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGAGTAAGACAACATAGCCAGATCCTCACAGGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTGCCTCCATTCATTATaGCAGACGCACTTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNCLHSL*QTHLCF
Trigger: AAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGGTCTTTCTGGGCTCCTaGAGTTTATCTGGATTCCAA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGVFLGS*SLSGFQ
Trigger: TTGGAATCCAGATAAACTCAAGGAGCCCAGAAAGAC...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGAGAGAACTTCTGTCTaGGATACCATTCATCATCTC +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLERTSV*DTIHHL
Trigger: GAGATGATGAATGGTATCCAAGACAGAAGTTCTCTC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTCTTTCCTGCTGTCGTaGAGGCAGTTTTTCCATGTA +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANSFLLS*RQFFHV
Trigger: TACATGGAAAAACTGCCTCAACGACAGCAGGAAAGA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACACCATTTCTCACCTCTaGATAGTCATGCAGCCTACA +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANTISHL*IVMQPT
Trigger: TGTAGGCTGCATGACTATCAAGAGGTGAGAAATGGT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACACTGACAAAGGTGCCTaGCCCTTAGACTCAAATTGT +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNTDKGA*PLDSNC
Trigger: ACAATTTGAGTCTAAGGGCAAGGCACCTTTGTCAGT...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACACTGACAAAGGTGCCTaGCCCTTAGACTCAAATTGT +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANTDKGA*PLDSNC
Trigger: ACAATTTGAGTCTAAGGGCAAGGCACCTTTGTCAGT...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTCCAAAGAAACCACATaGATTTGGGCGAAAAGCAAT +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLSKETT*IWAKSN
Trigger: ATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTTTTTCTTAAGACTCTaGCCACAAAGACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNFFLRL*PQRHCS
Trigger: GCTGCAGTGTCTTTGTGGCAAGAGTCTTAAGAAAAA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCTCTTGTTGACTGGTTaGCCTCCATTCATTATTGCA +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNLLLTG*PPFIIA
Trigger: TGCAATAATGAATGGAGGCAAACCAGTCAACAAGAG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTATGTTGTCTTACTCTaGTTGACTGGTTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANYVVLL*LTGLPP
Trigger: TGGAGGCAAACCAGTCAACAAGAGTAAGACAACATA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTGCATGGAATCTTCATaGTGTAGTCAACTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANCMESS*CSQLFL
Trigger: CAGGAACAGTTGACTACACAATGAAGATTCCATGCA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTCAAGAGGCCAGTACATaGATCCCACATATAATTTTC +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLQEAST*IPHIIF
Trigger: GAAAATTATATGTGGGATCAATGTACTGGCCTCTTG...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTGTACATCCTGGATTTaGATATGCCTGCATTTTGGA +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLCTSWI*ICLHFG
Trigger: TCCAAAATGCAGGCATATCAAAATCCAGGATGTACA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTTCAACTGTCAACACTTaGAAACCCTACTCCATATTC +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLSTVNT*KPYSIF
Trigger: GAATATGGAGTAGGGTTTCAAAGTGTTGACAGTTGA...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTGTGTATGTGTGGTTTaGATGCCAGCAATGCAAACA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGCVCVV*MPAMQT
Trigger: TGTTTGCATTGCTGGCATCAAAACCACACATACACA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGCATGTGAAATCTGGCTaGGCTCAGAATATCCTTAAC +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGHVKSG*AQNILN
Trigger: GTTAAGGATATTCTGAGCCAAGCCAGATTTCACATG...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CTACAAGGCCTACAGAAATCTTTGGACCCACTTTCTCAAAAACCAGTGGGTCTTGACTGCACTCTTACTTaGAGAAGTGTGTCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: LQGLQKSLDPLSQKPVGLDCTLT*RSVSRN
Trigger: ATTTCTTGACACACTTCTCAAAGTAAGAGTGCAGTC...AAGACCCACTGGTTTTTGAGAAAGTGGGTCCAAAGATTTCTGTAGGCCTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGGATCAGTTGGGTTCTaGTTTTTCTTAAGACTCTTG +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANGSVGF*FFLRLL
Trigger: CAAGAGTCTTAAGAAAAACAAGAACCCAACTGATCC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAACCCACTGGTATGAGGTaGAAGAGTGTAGAATTAGTG +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQPTGMR*KSVELV
Trigger: CACTAATTCTACACTCTTCAACCTCATACCAGTGGG...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGGAGAGCTTCCCTGGATaGTGTTTGAGCCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWESFPG*CLSHFP
Trigger: TGGGAAATGGCTCAAACACAATCCAGGGAAGCTCTC...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGACATACCAACAGTTCTaGATACACAGGTACCTACTA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGTYQQF*IHRYLL
Trigger: TAGTAGGTACCTGTGTATCAAGAACTGTTGGTATGT...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTCAACTGTCAACACTTaGAAACCCTACTCCATATTC +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNSTVNT*KPYSIF
Trigger: GAATATGGAGTAGGGTTTCAAAGTGTTGACAGTTGA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAGTTTAGAGAAGGTGTaGGCACTAACGCTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQSLEKV*ALTLLV
Trigger: AACAAGCAGCGTTAGTGCCAACACCTTCTCTAAACT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTGTAATTTCAGGTTCTaGTCATTGTGGGAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGCNFRF*SLWEVH
Trigger: ATGCACTTCCCACAATGACAAGAACCTGAAATTACA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTGTAATTTCAGGTTCTaGTCATTGTGGGAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANCNFRF*SLWEVH
Trigger: ATGCACTTCCCACAATGACAAGAACCTGAAATTACA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACGTTATTAGAAGCCTGTaGTCAGTGTGTCAACGATAT +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANVIRSL*SVCQRY
Trigger: ATATCGTTGACACACTGACAACAGGCTTCTAATAAC...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATCTTTCCTGCTGTCGTaGAGGCAGTTTTTCCATGTA +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQSFLLS*RQFFHV
Trigger: TACATGGAAAAACTGCCTCAACGACAGCAGGAAAGA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTCTTCAGTTAACTGTTaGTTTATTGCCTGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANSSVNC*FIACEV
Trigger: GACCTCACAGGCAATAAACAAACAGTTAACTGAAGA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACTTCTTACAGATGCTGTaGTGTGACAATGGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNFLQML*CDNGCK
Trigger: TTTACAGCCATTGTCACACAACAGCATCTGTAAGAA...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTTCTTACAGATGCTGTaGTGTGACAATGGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGFLQML*CDNGCK
Trigger: TTTACAGCCATTGTCACACAACAGCATCTGTAAGAA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTCAGGTTGCAGCATTTaGTCAGGCTTGAATGAAAAA +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANSGCSI*SGLNEK
Trigger: TTTTTCATTCAAGCCTGACAAAATGCTGCAACCTGA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CCACCCAAAAGTCATTTGGCAACATCTACAGACAATTTTGATTGTCACACTGGGTCAGGTTGCAGCATTTaGTCAGGCTTGAATGAAAAA +
Preference number: 5 (lower is better)
Translates to: PPKSHLATSTDNFDCHTGSGCSI*SGLNEK
Trigger: TTTTTCATTCAAGCCTGACAAAATGCTGCAACCTGA...CCCAGTGTGACAATCAAAATTGTCTGTAGATGTTGCCAAATGACTTTTGGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACGCTGATGCACAGACATaGGAATTCATTACATTATCT +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNADAQT*EFITLS
Trigger: AGATAATGTAATGAATTCCAATGTCTGTGCATCAGC...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GTGTATGTGTGTGTTTGTGTGTGTATGTGTGGTTTTGATGCCAGCAATGCAAACTGGCAAACATTTAATTaGGACTTTGGGGATTTTTGC +
Preference number: 5 (lower is better)
Translates to: VYVCVCVCMCGFDASNANWQTFN*DFGDFC
Trigger: GCAAAAATCCCCAAAGTCCAAATTAAATGTTTGCCA...GTTTGCATTGCTGGCATCAAAACCACACATACACACACAAACACACACATACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACTCTTCAGTTAACTGTTaGTTTATTGCCTGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: SITALILLLRIRKLNFTDSSVNC*FIACEV
Trigger: GACCTCACAGGCAATAAACAAACAGTTAACTGAAGA...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp CACAAAGTAACCTCCCCACCCTCAAACTCACATGTATGCAGTTGTATATTGAACCATTTGGGGATTTATTaGGCTTCAAGACTACACAAT +
Preference number: 5 (lower is better)
Translates to: HKVTSPPSNSHVCSCILNHLGIY*ASRLHN
Trigger: ATTGTGTAGTCTTGAAGCCAAATAAATCCCCAAATG...GTTCAATATACAACTGCATACATGTGAGTTTGAGGGTGGGGAGGTTACTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAAGCATATGCGTTCCTTaGCTGAAAATGTTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQSICVP*LKMFQR
Trigger: TCTTTGGAACATTTTCAGCAAAGGAACGCATATGCT...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACTGTTTTGTAGCAATTTaGATGACGTATTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: SITALILLLRIRKLNFTDCFVAI*MTYSLM
Trigger: CATCAGCGAATACGTCATCAAAATTGCTACAAAACA...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TCTATCACGGCGCTTATCCTCCTATTAAGGATCAGAAAGTTAAACTTTACGGACCATTTGGGGATTTATTaGGCTTCAAGACTACACAAT +
Preference number: 5 (lower is better)
Translates to: SITALILLLRIRKLNFTDHLGIY*ASRLHN
Trigger: ATTGTGTAGTCTTGAAGCCAAATAAATCCCCAAATG...GTCCGTAAAGTTTAACTTTCTGATCCTTAATAGGAGGATAAGCGCCGTGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAAGCTGATGCACAGACATaGGAATTCATTACATTATCT +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQADAQT*EFITLS
Trigger: AGATAATGTAATGAATTCCAATGTCTGTGCATCAGC...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGTTCAGGTTCTTGTCATaGTGGGAAGTGCATTTGTTC +
Preference number: 5 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWFRFLS*WEVHLF
Trigger: GAACAAATGCACTTCCCACAATGACAAGAACCTGAA...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp GCTTGTGATATGTATAAAACACACACACACAAAGAAACTAGAGGGGGATGTCAATGGCAAACATTTAATTaGGACTTTGGGGATTTTTGC +
Preference number: 5 (lower is better)
Translates to: ACDMYKTHTHKETRGGCQWQTFN*DFGDFC
Trigger: GCAAAAATCCCCAAAGTCCAAATTAAATGTTTGCCA...TTGACATCCCCCTCTAGTTTCTTTGTGTGTGTGTGTTTTATACATATCACAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS-3UTR CAA 90 bp TGCAGGAAGAAACAGCTCATTTTTAAACTACTGTATATGAAAGTTTTTGCCTGGCATTTAATTTGGACTTaGGGGATTTTTGCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: CRKKQLIFKLLYMKVFAWHLIWT*GIFAAE
Trigger: TTCAGCTGCAAAAATCCCCAAAGTCCAAATTAAATG...CCAGGCAAAAACTTTCATATACAGTAGTTTAAAAATGAGCTGTTTCTTCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS CCA 72 bp GATCCCGGGAAGCCGGACGTCGTGGCCGCCGCCGCTTaGCCACGTCCGAGTGGAGAGCGGGACCGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: DPGKPDVVAAAA*PRPSGERDRGC
Trigger: GCAGCCGCGGTCCCGCTCTCCACTCGGACGTGGCCAAGCGGCGGCGGCCACGACGTCCGGCTTCCCGGGATC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CCA 72 bp GGGCGCAGCCGGACGATCCCGGGAAGCCGGACGTCGTaGCCGCCGCCGCTTGGCCACGTCCGAGTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: GRSRTIPGSRTS*PPPLGHVRVES
Trigger: GCTCTCCACTCGGACGTGGCCAAGCGGCGGCGGCCACGACGTCCGGCTTCCCGGGATCGTCCGGCTGCGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 72 bp CGATCCCGGGAAGCCGGACGTCGTGGCCGCCGCCGCTaGGCCACGTCCGAGTGGAGAGCGGGACCGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RSREAGRRGRRR*ATSEWRAGPRL
Trigger: CAGCCGCGGTCCCGCTCTCCACTCGGACGTGGCCAAGCGGCGGCGGCCACGACGTCCGGCTTCCCGGGATCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 72 bp CTGGCAGACGGCCGGTCCCAGTGCTGCTCCCGCGCCTaGCGCTTCTGGCGGATCAAGCCGCTAGCGATGGCC +
Preference number: 6 (lower is better)
Translates to: LADGRSQCCSRA*RFWRIKPLAMA
Trigger: GGCCATCGCTAGCGGCTTGATCCGCCAGAAGCGGCAGGCGCGGGAGCAGCACTGGGACCGGCCGTCTGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CCA 72 bp CCACCAGGTTGCCGTTGCAGAGCCCGCGGTTCTTGCTaGGGCTGCTCCGCCTCCTGCTGGCAGACGGCCGGT +
Preference number: 6 (lower is better)
Translates to: PPGCRCRARGSC*GCSASCWQTAG
Trigger: ACCGGCCGTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 72 bp ATATCCACCAGGTTGCCGTTGCAGAGCCCGCGGTTCTaGCTGGGGCTGCTCCGCCTCCTGCTGGCAGACGGC +
Preference number: 6 (lower is better)
Translates to: ISTRLPLQSPRF*LGLLRLLLADG
Trigger: GCCGTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 90 bp TTGGAGAAGATATCCACCAGGTTGCCGTTGCAGAGCCCGCGGTTCTaGCTGGGGCTGCTCCGCCTCCTGCTGGCAGACGGCCGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: LEKISTRLPLQSPRF*LGLLRLLLADGRSQ
Trigger: CTGGGACCGGCCGTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 90 bp AGGCCGAAGATGCGCACTTTGGAGAAGATATCCACCAGGTTGCCGTaGCAGAGCCCGCGGTTCTTGCTGGGGCTGCTCCGCCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RPKMRTLEKISTRLP*QSPRFLLGLLRLLL
Trigger: CAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 72 bp TGCGCACTTTGGAGAAGATATCCACCAGGTTGCCGTTaGAGAGCCCGCGGTTCTTGCTGGGGCTGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: CALWRRYPPGCR*RARGSCWGCSA
Trigger: GGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 72 bp ATGCGCACTTTGGAGAAGATATCCACCAGGTTGCCGTaGCAGAGCCCGCGGTTCTTGCTGGGGCTGCTCCGC +
Preference number: 6 (lower is better)
Translates to: MRTLEKISTRLP*QSPRFLLGLLR
Trigger: GCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 90 bp TTCTTGAGGCCGAAGATGCGCACTTTGGAGAAGATATCCACCAGGTaGCCGTTGCAGAGCCCGCGGTTCTTGCTGGGGCTGCTCCGCCTC +
Preference number: 6 (lower is better)
Translates to: FLRPKMRTLEKISTR*PLQSPRFLLGLLRL
Trigger: GAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCGGCCTCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 90 bp TCTTGGCGCCGCAACCTGCGCTTCTTGAGGCCGAAGATGCGCACTTaGGAGAAGATATCCACCAGGTTGCCGTTGCAGAGCCCGCGGTTC +
Preference number: 6 (lower is better)
Translates to: SWRRNLRFLRPKMRT*EKISTRLPLQSPRF
Trigger: GAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGCGGCGCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 72 bp CGAAGATGCGCACTTTGGAGAAGATATCCACCAGGTTaGCGTTGCAGAGCCCGCGGTTCTTGCTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RRCALWRRYPPG*RCRARGSCWGC
Trigger: GCAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 72 bp CCGAAGATGCGCACTTTGGAGAAGATATCCACCAGGTaGCCGTTGCAGAGCCCGCGGTTCTTGCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: PKMRTLEKISTR*PLQSPRFLLGL
Trigger: CAGCCCCAGCAAGAACCGCGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS TCA 72 bp AATCTCCCCTCCGGATTCCTCGCCCAGCCTCGGATGTaGGTTACAGGCATTAGAGGGAGGAGGAGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: NLPSGFLAQPRM*VTGIRGRRRRS
Trigger: ACTCCTCCTCCTCCTCCCTCTAATGCCTGTAACTCACATCCGAGGCTGGGCGAGGAATCCGGAGGGGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418923.2
CDS CAA 72 bp CGCAACCTGCGCTTCTTGAGGCCGAAGATGCGCACTTaGGAGAAGATATCCACCAGGTTGCCGTTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: RNLRFLRPKMRT*EKISTRLPLQS
Trigger: GCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 72 bp TTGAGCTGGGGATCTTGGCGCCGCAACCTGCGCTTCTaGAGGCCGAAGATGCGCACTTTGGAGAAGATATCC +
Preference number: 6 (lower is better)
Translates to: LSWGSWRRNLRF*RPKMRTLEKIS
Trigger: GGATATCTTCTCCAAAGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGCGGCGCCAAGATCCCCAGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS CAA 90 bp ACTATACCCTTGAGCTGGGGATCTTGGCGCCGCAACCTGCGCTTCTaGAGGCCGAAGATGCGCACTTTGGAGAAGATATCCACCAGGTTG +
Preference number: 6 (lower is better)
Translates to: TIPLSWGSWRRNLRF*RPKMRTLEKISTRL
Trigger: CAACCTGGTGGATATCTTCTCCAAAGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGCGGCGCCAAGATCCCCAGCTCAAGGGTATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376143.5
CDS GCA 72 bp CTGGTTTGCCTCCATTCATTATTGCAGACGCACTTGTaGTTTTACTTGGCGTCACCCCAGGCTTCGGGACCG +
Preference number: 6 (lower is better)
Translates to: LVCLHSLLQTHL*FYLASPQASGP
Trigger: CGGTCCCGAAGCCTGGGGTGACGCCAAGTAAAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS CAA 72 bp ATCCAGCAGCTTAGACACCCAATACCACCTCCGAGATaGAGTCTGACAGCCGAAGACAGAGCCTCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: IQQLRHPIPPPR*SLTAEDRASLL
Trigger: GAGAAGGGAGGCTCTGTCTTCGGCTGTCAGACTCAATCTCGGAGGTGGTATTGGGTGTCTAAGCTGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418923.2
CDS GCA 72 bp GTCACCCCAGGCTTCGGGACCGTTTCCCCAACATCATaGAAAGATGGTTCTCGGTACATGGCAACTTCCAAT +
Preference number: 6 (lower is better)
Translates to: VTPGFGTVSPTS*KDGSRYMATSN
Trigger: ATTGGAAGTTGCCATGTACCGAGAACCATCTTTGCATGATGTTGGGGAAACGGTCCCGAAGCCTGGGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS CCA 72 bp AGGCTTCGGGACCGTTTCCCCAACATCATGCAAAGATaGTTCTCGGTACATGGCAACTTCCAATGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RLRDRFPNIMQR*FSVHGNFQWLG
Trigger: CCCAAGCCATTGGAAGTTGCCATGTACCGAGAACCATCTTTGCATGATGTTGGGGAAACGGTCCCGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS CAA 72 bp ATGAGGTTGAAGAGTGTAGAATTAGTGCTGTCATCCTaGGTTCCATCGAGAGCTCCATCGGGGTGCATTTGC +
Preference number: 6 (lower is better)
Translates to: MRLKSVELVLSS*VPSRAPSGCIC
Trigger: GCAAATGCACCCCGATGGAGCTCTCGATGGAACCAAGGATGACAGCACTAATTCTACACTCTTCAACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376131.8
ENST00000376143.5
ENST00000468052.1
CDS GCA 72 bp CTTACTCTTGTTGACTGGTTTGCCTCCATTCATTATTaGAGACGCACTTGTGCTTTTACTTGGCGTCACCCC +
Preference number: 6 (lower is better)
Translates to: LTLVDWFASIHY*RRTCAFTWRHP
Trigger: GGGGTGACGCCAAGTAAAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGAGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS TCA 72 bp ACCTGTGAGGATCTGGCTATGTTGTCTTACTCTTGTTaGCTGGTTTGCCTCCATTCATTATTGCAGACGCAC +
Preference number: 6 (lower is better)
Translates to: TCEDLAMLSYSC*LVCLHSLLQTH
Trigger: GTGCGTCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGAGTAAGACAACATAGCCAGATCCTCACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS CAA 72 bp CCTTTGCTGAAAATGTTCCAAAGAAACCACATTGATTaGGGCGAAAAGCAATCCAGCAGCTTAGACACCCTG +
Preference number: 6 (lower is better)
Translates to: PLLKMFQRNHID*GEKQSSSLDTL
Trigger: CAGGGTGTCTAAGCTGCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS CAA 72 bp GGATCTGGCTATGTTGTCTTACTCTTGTTGACTGGTTaGCCTCCATTCATTATTGCAGACGCACTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: GSGYVVLLLLTG*PPFIIADALVL
Trigger: AAGCACAAGTGCGTCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGAGTAAGACAACATAGCCAGATCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000376143.5
CDS CAA 90 bp ATATGCGTTCCTTTGCTGAAAATGTTCCAAAGAAACCACATTGATTaGGGCGAAAAGCAATCCAGCAGCTTAGACACCCAATACCACCTC +
Preference number: 6 (lower is better)
Translates to: ICVPLLKMFQRNHID*GEKQSSSLDTQYHL
Trigger: GAGGTGGTATTGGGTGTCTAAGCTGCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGGAACGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418923.2
CDS CAA 90 bp GCTGCCATTGTTATTTTACATGCATTGAACGAATGGCCGAGATCTTaGGCGTCTTACTTACTGATGGGTAGAGGTAACCTTCTCCATTCA +
Preference number: 6 (lower is better)
Translates to: AAIVILHALNEWPRS*ASYLLMGRGNLLHS
Trigger: TGAATGGAGAAGGTTACCTCTACCCATCAGTAAGTAAGACGCCAAAGATCTCGGCCATTCGTTCAATGCATGTAAAATAACAATGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468052.1
CDS TCA 72 bp CGTTCCTTTGCTGAAAATGTTCCAAAGAAACCACATTaGTTTGGGCGAAAAGCAATCCAGCAGCTTAGACAC +
Preference number: 6 (lower is better)
Translates to: RSFAENVPKKPH*FGRKAIQQLRH
Trigger: GTGTCTAAGCTGCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000418923.2
CDS TCA 72 bp TTTATAATCAATCGCCAGTGCTCAGTGGGATCGGTTTaGACCTGCAGTTCTCAATCACCACGAAGAAAAGAT +
Preference number: 6 (lower is better)
Translates to: FIINRQCSVGSV*TCSSQSPRRKD
Trigger: ATCTTTTCTTCGTGGTGATTGAGAACTGCAGGTTCAAACCGATCCCACTGAGCACTGGCGATTGATTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418923.2
CDS CCA 72 bp GTTGCTGCCATTGTTATTTTACATGCATTGAACGAATaGCCGAGATCTTTGGCGTCTTACTTACTGATGGGT +
Preference number: 6 (lower is better)
Translates to: VAAIVILHALNE*PRSLASYLLMG
Trigger: ACCCATCAGTAAGTAAGACGCCAAAGATCTCGGCCATTCGTTCAATGCATGTAAAATAACAATGGCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468052.1
CDS CAA 72 bp TTTTATAATCAATCGCCAGTGCTCAGTGGGATCGGTTaGAACCTGCAGTTCTCAATCACCACGAAGAAAAGA +
Preference number: 6 (lower is better)
Translates to: FYNQSPVLSGIG*NLQFSITTKKR
Trigger: TCTTTTCTTCGTGGTGATTGAGAACTGCAGGTTCAAACCGATCCCACTGAGCACTGGCGATTGATTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418923.2
CDS CAA 72 bp CCTTTGCTGAAAATGTTCCAAAGAAACCACATTGATTaGGGCGAAAAGCAATCCAGCAGCTTAGACACCCAA +
Preference number: 6 (lower is better)
Translates to: PLLKMFQRNHID*GEKQSSSLDTQ
Trigger: TTGGGTGTCTAAGCTGCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418923.2
CDS CAA 90 bp ATATGCGTTCCTTTGCTGAAAATGTTCCAAAGAAACCACATTGATTaGGGCGAAAAGCAATCCAGCAGCTTAGACACCCTGAGAAAGAAG +
Preference number: 6 (lower is better)
Translates to: ICVPLLKMFQRNHID*GEKQSSSLDTLRKK
Trigger: CTTCTTTCTCAGGGTGTCTAAGCTGCTGGATTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGGAACGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS CAA 72 bp GTTATTTTACATGCATTGAACGAATGGCCGAGATCTTaGGCGTCTTACTTACTGATGGGTAGAGGTAACCTT +
Preference number: 6 (lower is better)
Translates to: VILHALNEWPRS*ASYLLMGRGNL
Trigger: AAGGTTACCTCTACCCATCAGTAAGTAAGACGCCAAAGATCTCGGCCATTCGTTCAATGCATGTAAAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468052.1
CDS CAA 90 bp GAAAAGCAATCCAGCAGCTTAGACACCCTGAGAAAGAAGAGATCCTaGTGGTTGCATAATAATAATTTGAAATCAGTTCTCCTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: EKQSSSLDTLRKKRS*WLHNNNLKSVLLKR
Trigger: CCTCTTCAGGAGAACTGATTTCAAATTATTATTATGCAACCACAAGGATCTCTTCTTTCTCAGGGTGTCTAAGCTGCTGGATTGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376131.8
CDS GCA 72 bp TTCTTGTTTTTCTTAAGACTCTTGCCACAAAGACACTaGAGCATATGCGTTCCTTTGCTGAAAATGTTCCAA +
Preference number: 6 (lower is better)
Translates to: FLFFLRLLPQRH*SICVPLLKMFQ
Trigger: TTGGAACATTTTCAGCAAAGGAACGCATATGCTGCAGTGTCTTTGTGGCAAGAGTCTTAAGAAAAACAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376131.8
ENST00000418923.2