RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGF13 (Homo sapiens)

Ensembl gene IDs: ENSG00000129682

Ensembl transcript IDs: ENST00000305414.8, ENST00000315930.11, ENST00000421460.1, ENST00000436198.5, ENST00000441825.8, ENST00000448673.1, ENST00000455663.5, ENST00000626909.2

Found 756 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGTTCCGCATGGCTTCGGAGGCCTCAGGAGACTTACAATCATGGTaGAAGGCCCCTCTTCACAGGGTGGCAGGAGAGAGAATGAGTGCC +
Preference number: 1 (lower is better)
Translates to: QFRMASEASGDLQSW*KAPLHRVAGERMSA
Trigger: GGCACTCATTCTCTCTCCTGCCACCCTGTGAAGAGGGGCCTTCCACCATGATTGTAAGTCTCCTGAGGCCTCCGAAGCCATGCGGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp CTGCACACGGCCCAAACCCTGACAGCGAGTGTGAACTTGTGTGCATaGAGAAGCAGGCAGCTTGACTCTGTGGGAATGGGAGAAGGCACA +
Preference number: 1 (lower is better)
Translates to: LHTAQTLTASVNLCA*RSRQLDSVGMGEGT
Trigger: TGTGCCTTCTCCCATTCCCACAGAGTCAAGCTGCCTGCTTCTGCATGCACACAAGTTCACACTCGCTGTCAGGGTTTGGGCCGTGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp ACTTCACAGACTCCATCAGGAGGCCCACCCACTAGTGGCTTGGGATaGCTGAACTGTAAACCCCCGAAGCTGACACATGGGTGCTCCCAA +
Preference number: 1 (lower is better)
Translates to: TSQTPSGGPPTSGLG*LNCKPPKLTHGCSQ
Trigger: TTGGGAGCACCCATGTGTCAGCTTCGGGGGTTTACAGTTCAGGCATCCCAAGCCACTAGTGGGTGGGCCTCCTGATGGAGTCTGTGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp TGCTCCCAAAACTTTGCATGTCTCCCTCTCTCCTCTACCTTGGCTTaGTCCCTGCACACGGCCCAAACCCTGACAGCGAGTGTGAACTTG +
Preference number: 1 (lower is better)
Translates to: CSQNFACLPLSSTLA*SLHTAQTLTASVNL
Trigger: CAAGTTCACACTCGCTGTCAGGGTTTGGGCCGTGTGCAGGGAGCAAGCCAAGGTAGAGGAGAGAGGGAGACATGCAAAGTTTTGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp TCACAGTTCCGCATGGCTTCGGAGGCCTCAGGAGACTTACAATCATaGTGGAAGGCCCCTCTTCACAGGGTGGCAGGAGAGAGAATGAGT +
Preference number: 1 (lower is better)
Translates to: SQFRMASEASGDLQS*WKAPLHRVAGERMS
Trigger: ACTCATTCTCTCTCCTGCCACCCTGTGAAGAGGGGCCTTCCACCATGATTGTAAGTCTCCTGAGGCCTCCGAAGCCATGCGGAACTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp TTGCAGGATGCAGCCACCCTCACAGCTCTTTTCATGGGCTGGTGTTaGGTGCCAGTGGCTTTTCCAGGTGCATGGTGCAAGCTATTGGTG +
Preference number: 1 (lower is better)
Translates to: LQDAATLTALFMGWC*VPVAFPGAWCKLLV
Trigger: CACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGAGGGTGGCTGCATCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp AATGATCTCCTTAGGCTCCATGTCTCACATCTATCCAGGTCACAATaGTGCAAGGGGTGGGCTCCCACAGCCTTGGGCAGCTCTTCCCCT +
Preference number: 1 (lower is better)
Translates to: NDLLRLHVSHLSRSQ*CKGWAPTALGSSSP
Trigger: AGGGGAAGAGCTGCCCAAGGCTGTGGGAGCCCACCCCTTGCATCATTGTGACCTGGATAGATGTGAGACATGGAGCCTAAGGAGATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp GGCGCTTTCCCATTCTCTCTCCTGCTGCCACGTGGAAAAGGTCCTTaGTTCCCCTTCATCTTCTGCCATGATGGTAAGTTTCCTGAGGCC +
Preference number: 1 (lower is better)
Translates to: GAFPFSLLLPRGKGP*FPFIFCHDGKFPEA
Trigger: GGCCTCAGGAAACTTACCATCATGGCAGAAGATGAAGGGGAAGCAAGGACCTTTTCCACGTGGCAGCAGGAGAGAGAATGGGAAAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp AGGATGCAGCCACCCTCACAGCTCTTTTCATGGGCTGGTGTTGAGTaGCAGTGGCTTTTCCAGGTGCATGGTGCAAGCTATTGGTGGATC +
Preference number: 1 (lower is better)
Translates to: RMQPPSQLFSWAGVE*QWLFQVHGASYWWI
Trigger: GATCCACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGAGGGTGGCTGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp GGTGTTGAGTGCCAGTGGCTTTTCCAGGTGCATGGTGCAAGCTATTaGTGGATCTACCATTCTGGGGTCTGGAGGACTATGGCCCTCTTC +
Preference number: 1 (lower is better)
Translates to: GVECQWLFQVHGASY*WIYHSGVWRTMALF
Trigger: GAAGAGGGCCATAGTCCTCCAGACCCCAGAATGGTAGATCCACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCACTCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp GTTGAGTGCCAGTGGCTTTTCCAGGTGCATGGTGCAAGCTATTGGTaGATCTACCATTCTGGGGTCTGGAGGACTATGGCCCTCTTCTCA +
Preference number: 1 (lower is better)
Translates to: VECQWLFQVHGASYW*IYHSGVWRTMALFS
Trigger: TGAGAAGAGGGCCATAGTCCTCCAGACCCCAGAATGGTAGATCCACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCACTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp CAGCCACCCTCACAGCTCTTTTCATGGGCTGGTGTTGAGTGCCAGTaGCTTTTCCAGGTGCATGGTGCAAGCTATTGGTGGATCTACCAT +
Preference number: 1 (lower is better)
Translates to: QPPSQLFSWAGVECQ*LFQVHGASYWWIYH
Trigger: ATGGTAGATCCACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGAGGGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp GCTTTTCCAGGTGCATGGTGCAAGCTATTGGTGGATCTACCATTCTaGGGTCTGGAGGACTATGGCCCTCTTCTCAGAGCTCCACTATAC +
Preference number: 1 (lower is better)
Translates to: AFPGAWCKLLVDLPF*GLEDYGPLLRAPLY
Trigger: GTATAGTGGAGCTCTGAGAAGAGGGCCATAGTCCTCCAGACCCCAGAATGGTAGATCCACCAATAGCTTGCACCATGCACCTGGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp CTCATGATTTCTCCATTGGGTGAAAGGGAGAGTGTAGTAAATGAATaGCTGGCTTTCCTAGCCACGTGGGACACTGACCAAGAGGCCTAC +
Preference number: 1 (lower is better)
Translates to: LMISPLGERESVVNE*LAFLATWDTDQEAY
Trigger: GTAGGCCTCTTGGTCAGTGTCCCACGTGGCTAGGAAAGCCAGGCATTCATTTACTACACTCTCCCTTTCACCCAATGGAGAAATCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp AACTCTTCGGTGAGCTTGACTGGCTTAAAACTGGAACAAATGTACTaGTTAGGGAGGGGAGGAGTGCCACAGATCACTTCCCTCTCAGTC +
Preference number: 1 (lower is better)
Translates to: NSSVSLTGLKLEQMY*LGRGGVPQITSLSV
Trigger: GACTGAGAGGGAAGTGATCTGTGGCACTCCTCCCCTCCCTAACCAGTACATTTGTTCCAGTTTTAAGCCAGTCAAGCTCACCGAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp GCCACAGATCACTTCCCTCTCAGTCCTTTAAGGATTCCATGGCAATaGGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGGG +
Preference number: 1 (lower is better)
Translates to: ATDHFPLSPLRIPWQ*ACPLFGYKQNSWEG
Trigger: CCCCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAATCCTTAAAGGACTGAGAGGGAAGTGATCTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp AGCAGGCAGCTTGACTCTGTGGGAATGGGAGAAGGCACAAAAACTTaGGCACTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTC +
Preference number: 1 (lower is better)
Translates to: SRQLDSVGMGEGTKT*ALQGTTLEKTNGKL
Trigger: GAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAGTGCTCAAGTTTTTGTGCCTTCTCCCATTCCCACAGAGTCAAGCTGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp CAGGTGAGCGTACCTCATGTAGGTGTGTTTAGAGCTCAGGCAGGATaGAGCAGGATGAGGAGGACTTATCTCATGAAATTACAAGGTGAC +
Preference number: 1 (lower is better)
Translates to: QVSVPHVGVFRAQAG*SRMRRTYLMKLQGD
Trigger: GTCACCTTGTAATTTCATGAGATAAGTCCTCCTCATCCTGCTTCATCCTGCCTGAGCTCTAAACACACCTACATGAGGTACGCTCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp CTGTCTCATATAGTGAGGAAGTTCTCACTAAATCTGTTTGATAAGTaGCGCTTTCCCATTCTCTCTCCTGCTGCCACGTGGAAAAGGTCC +
Preference number: 1 (lower is better)
Translates to: LSHIVRKFSLNLFDK*RFPILSPAATWKRS
Trigger: GGACCTTTTCCACGTGGCAGCAGGAGAGAGAATGGGAAAGCGCCACTTATCAAACAGATTTAGTGAGAACTTCCTCACTATATGAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp GAAAGATTGCTCCTTTCCCAGACATCACTTGCATACCAGGGGCTCTaGCCCTCATTGTCCAGCTACACTAGGCTAATTAATATTTTAGAG +
Preference number: 1 (lower is better)
Translates to: ERLLLSQTSLAYQGL*PSLSSYTRLINILE
Trigger: CTCTAAAATATTAATTAGCCTAGTGTAGCTGGACAATGAGGGGCAGAGCCCCTGGTATGCAAGTGATGTCTGGGAAAGGAGCAATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp TCTCAGTCCTTTAAGGATTCCATGGCAATGAGCATGTCCTCTCTTTaGATACAAACAAAACTCCTGGGAGGGGGAATTGGAGCCTGTTTT +
Preference number: 1 (lower is better)
Translates to: SQSFKDSMAMSMSSL*IQTKLLGGGIGACF
Trigger: AAAACAGGCTCCAATTCCCCCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAATCCTTAAAGGACTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp TCCGCTTTTAGTACAGTTAGCCTTGCAGGTGACTCCAAGGAACTTTaGAGCTCTCTTTACCAAAACTTCCCTAAGAACAGCAACATGACT +
Preference number: 1 (lower is better)
Translates to: SAFSTVSLAGDSKEL*SSLYQNFPKNSNMT
Trigger: AGTCATGTTGCTGTTCTTAGGGAAGTTTTGGTAAAGAGAGCTTCAAAGTTCCTTGGAGTCACCTGCAAGGCTAACTGTACTAAAAGCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp ACAGAAAAGATGTGCAAGAGTCTTAGTATCCCCAGTCAGGCTAACTaGTATAACTGTTTCTCTTCTGAAGCCAGTCAGTATAGGCTGAAG +
Preference number: 1 (lower is better)
Translates to: TEKMCKSLSIPSQAN*YNCFSSEASQYRLK
Trigger: CTTCAGCCTATACTGACTGGCTTCAGAAGAGAAACAGTTATACCAGTTAGCCTGACTGGGGATACTAAGACTCTTGCACATCTTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp GACAGATGCTGGCAAGGTTGCAGAGAAATAGGAACACTTTTACACTaGTGGTGGGAAAGTAAATTAGTTCAAACATTGTGGAAGACAGTG +
Preference number: 1 (lower is better)
Translates to: DRCWQGCREIGTLLH*WWESKLVQTLWKTV
Trigger: CACTGTCTTCCACAATGTTTGAACTAATTTACTTTCCCACCAGCAGTGTAAAAGTGTTCCTATTTCTCTGCAACCTTGCCAGCATCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp AGATGCTGGCAAGGTTGCAGAGAAATAGGAACACTTTTACACTGCTaGTGGGAAAGTAAATTAGTTCAAACATTGTGGAAGACAGTGTGG +
Preference number: 1 (lower is better)
Translates to: RCWQGCREIGTLLHC*WESKLVQTLWKTVW
Trigger: CCACACTGTCTTCCACAATGTTTGAACTAATTTACTTTCCCACCAGCAGTGTAAAAGTGTTCCTATTTCTCTGCAACCTTGCCAGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp TGCACGCATATGTTCACTGCAGCACTGTTCAAAAGAGCAAAGATGTaGAATCAACCCAAATGCCCATCAATGATACAGTGGATAAAGAAA +
Preference number: 1 (lower is better)
Translates to: CTHMFTAALFKRAKM*NQPKCPSMIQWIKK
Trigger: TTTCTTTATCCACTGTATCATTGATGGGCATTTGGGTTGATTCCACATCTTTGCTCTTTTGAACAGTGCTGCAGTGAACATATGCGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp AACTTTGAAGCTCTCTTTACCAAAACTTCCCTAAGAACAGCAACATaGCTTGTTTATTTAGTGTCCTGCTACACACACACACAGACACAG +
Preference number: 1 (lower is better)
Translates to: NFEALFTKTSLRTAT*LVYLVSCYTHTQTQ
Trigger: CTGTGTCTGTGTGTGTGTGTAGCAGGACACTAAATAAACAAGTCATGTTGCTGTTCTTAGGGAAGTTTTGGTAAAGAGAGCTTCAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp GCATTCCCACTTCTGGTTATATATCCAAAGGAAATTAAATCAGTATaGCAAACAGACATCTGCACTCCCATTCATTCCCATTGCACCATT +
Preference number: 1 (lower is better)
Translates to: AFPLLVIYPKEIKSV*QTDICTPIHSHCTI
Trigger: AATGGTGCAATGGGAATGAATGGGAGTGCAGATGTCTGTTTGGCATACTGATTTAATTTCCTTTGGATATATAACCAGAAGTGGGAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp ACTGCAGCACTGTTCAAAAGAGCAAAGATGTGGAATCAACCCAAATaGCCATCAATGATACAGTGGATAAAGAAAATGTGGCACATATAC +
Preference number: 1 (lower is better)
Translates to: TAALFKRAKMWNQPK*PSMIQWIKKMWHIY
Trigger: GTATATGTGCCACATTTTCTTTATCCACTGTATCATTGATGGGCATTTGGGTTGATTCCACATCTTTGCTCTTTTGAACAGTGCTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp CTCCCATTCATTCCCATTGCACCATTATTCACAATAGATAAGTTATaGAACAACCTAAGTGCCCACGGACAGATGAATGAAGAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: LPFIPIAPLFTIDKL*NNLSAHGQMNEERK
Trigger: TTTTCTTTCTTCATTCATCTGTCCGTGGGCACTTAGGTTGTTCCATAACTTATCTATTGTGAATAATGGTGCAATGGGAATGAATGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp ATTGTTAAAGACTCTGCCAGTGAAGGCACATTTCAATTTTACCCATaGATGACATCGCATCTAAATGAGGCTTCTAAGACACATTCGTAT +
Preference number: 1 (lower is better)
Translates to: IVKDSASEGTFQFYP*MTSHLNEASKTHSY
Trigger: ATACGAATGTGTCTTAGAAGCCTCATTTAGATGCGATGTCATTCATGGGTAAAATTGAAATGTGCCTTCACTGGCAGAGTCTTTAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp ATCCATTTATCTTTGTGTGAATGCTTTATCCAGGCCTCAGTAATGTaGTGTGAAGCGCTGACAGTATTTAAGGTCATAAATATCTACTGT +
Preference number: 1 (lower is better)
Translates to: IHLSLCECFIQASVM*CEALTVFKVINIYC
Trigger: ACAGTAGATATTTATGACCTTAAATACTGTCAGCGCTTCACAGCACATTACTGAGGCCTGGATAAAGCATTCACACAAAGATAAATGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 90 bp GAAAGAAAGACAGAAACTATCACAGTGAACATGCAACCTACAGAGTaGGAGAAAATTTTTGCAATCTATCCATCTGACAACGGTCTAATA +
Preference number: 1 (lower is better)
Translates to: ERKTETITVNMQPTE*EKIFAIYPSDNGLI
Trigger: TATTAGACCGTTGTCAGATGGATAGATTGCAAAAATTTTCTCCCACTCTGTAGGTTGCATGTTCACTGTGATAGTTTCTGTCTTTCTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 90 bp CTAAAACTGAAAATCATCCACATTGTGTGTTCTAGAAAGACTTCCTaGATTGTGACAGAATTGCAACTGTTACAAACTTCTTCCAGTATG +
Preference number: 1 (lower is better)
Translates to: LKLKIIHIVCSRKTS*IVTELQLLQTSSSM
Trigger: CATACTGGAAGAAGTTTGTAACAGTTGCAATTCTGTCACAATGCAGGAAGTCTTTCTAGAACACACAATGTGGATGATTTTCAGTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp TTTCAGTATACTATTACTTGTAGCATTCTCAATCGTGTGAAACCATaGGACCACATCTTTGTGGACAGAGCAATAAAAGTTATGAAAAGC +
Preference number: 1 (lower is better)
Translates to: FQYTITCSILNRVKP*DHIFVDRAIKVMKS
Trigger: GCTTTTCATAACTTTTATTGCTCTGTCCACAAAGATGTGGTCTCATGGTTTCACACGATTGAGAATGCTACAAGTAATAGTATACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 90 bp TGTAATAGCCCAAAAGTAGAAAGAACACAAATGTTGTTCAACAGGTaGATAGTTAAACTATGGCACATCTCTACCATGGAATACTACACA +
Preference number: 1 (lower is better)
Translates to: CNSPKVERTQMLFNR*IVKLWHISTMEYYT
Trigger: TGTGTAGTATTCCATGGTAGAGATGTGCCATAGTTTAACTATTCACCTGTTGAACAACATTTGTGTTCTTTCTACTTTTGGGCTATTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp CATGGGTGCTCCCAAAACTTTGCATGTCTCCCTCTCTCCTCTACCTaGGCTTGCTCCCTGCACACGGCCCAAACCCTGACAGCGAGTGTG +
Preference number: 2 (lower is better)
Translates to: HGCSQNFACLPLSST*ACSLHTAQTLTASV
Trigger: CACACTCGCTGTCAGGGTTTGGGCCGTGTGCAGGGAGCAAGCCAAGGTAGAGGAGAGAGGGAGACATGCAAAGTTTTGGGAGCACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp GTGCTCCCAAAACTTTGCATGTCTCCCTCTCTCCTCTACCTTGGCTaGCTCCCTGCACACGGCCCAAACCCTGACAGCGAGTGTGAACTT +
Preference number: 2 (lower is better)
Translates to: VLPKLCMSPSLLYLG*LPAHGPNPDSECEL
Trigger: AAGTTCACACTCGCTGTCAGGGTTTGGGCCGTGTGCAGGGAGCAAGCCAAGGTAGAGGAGAGAGGGAGACATGCAAAGTTTTGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp CTAACAACTTCACAGACTCCATCAGGAGGCCCACCCACTAGTGGCTaGGGATGCCTGAACTGTAAACCCCCGAAGCTGACACATGGGTGC +
Preference number: 2 (lower is better)
Translates to: LTTSQTPSGGPPTSG*GCLNCKPPKLTHGC
Trigger: GCACCCATGTGTCAGCTTCGGGGGTTTACAGTTCAGGCATCCCAAGCCACTAGTGGGTGGGCCTCCTGATGGAGTCTGTGAAGTTGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp TTTGCAGGATGCAGCCACCCTCACAGCTCTTTTCATGGGCTGGTGTaGAGTGCCAGTGGCTTTTCCAGGTGCATGGTGCAAGCTATTGGT +
Preference number: 2 (lower is better)
Translates to: FAGCSHPHSSFHGLV*SASGFSRCMVQAIG
Trigger: ACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGAGGGTGGCTGCATCCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGTAATCCCAGCGCTTTaGGAGGCCGAGGAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLVIPAL*EAEEGG
Trigger: TCCACCTTCCTCGGCCTCCCAAAGCGCTGGGATTAC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR TCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGGCTGTGGTGAGACATaGTCACACCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLGCGET*SHHCTP
Trigger: TGGAGTGCAGTGGTGTGATCATGTCTCACCACAGCC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp TTCTCAAAGTCCCGAGGATCAACAGCCTCAGCATCACCTGGAAACTaGTTAGAAATGCCAAGTTTTGGGCCCACACAAGACTCACTCAAT +
Preference number: 2 (lower is better)
Translates to: FSKSRGSTASASPGN*LEMPSFGPTQDSLN
Trigger: ATTGAGTGAGTCTTGTGTGGGCCCAAAACTTGGCATTTCTAACAAGTTTCCAGGTGATGCTGAGGCTGTTGATCCTCGGGACTTTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR TCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGAATCGTGTGAAACCATaGGACCACATCTTTGTGGAC +
Preference number: 2 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALNRVKP*DHIFVD
Trigger: GTCCACAAAGATGTGGTCTCATGGTTTCACACGATT...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCAAACTTCTTCCAGTATaGCCACATAGAAATTGGAAA +
Preference number: 2 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCKLLPV*PHRNWK
Trigger: TTTCCAATTTCTATGTGGGCATACTGGAAGAAGTTT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGCAAACCTGCATATCCTaGACATGTACCCTGGAACTT +
Preference number: 2 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALQTCIS*TCTLEL
Trigger: AAGTTCCAGGGTACATGTGCAGGATATGCAGGTTTG...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR TCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGTACAGATTTTTGTACTaGCAATCACAGCCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALYRFLY*QSQPCC
Trigger: ACAGCAGGGCTGTGATTGTCAGTACAAAAATCTGTA...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp CCCACTATCTACAATTTTGACAACCACTCAAGTATGAGAGTACCTTaGTGGGAGTCTGGTAGTCCAGCTCACAGATGGAGCAAAACAATT +
Preference number: 2 (lower is better)
Translates to: PTIYNFDNHSSMRVP*WESGSPAHRWSKTI
Trigger: AATTGTTTTGCTCCATCTGTGAGCTGGACTACCAGACTCCCACAAAGGTACTCTCATACTTGAGTGGTTGTCAAAATTGTAGATAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGAGAATGCTCACTCTTaGCACTTCTATTCCACATGG +
Preference number: 2 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLENAHS*HFYSTW
Trigger: CCATGTGGAATAGAAGTGGCAAGAGTGAGCATTCTC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGAGGCCTCCCCAGCCATaGAGAACTGTGAGTCAATTA +
Preference number: 2 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWRPPQP*RTVSQL
Trigger: TAATTGACTCACAGTTCTGCATGGCTGGGGAGGCCT...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR TCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGTCCCCAAAGTATAGGTaGGATCATGAGAAAATTTGG +
Preference number: 2 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWSPKYR*DHEKIW
Trigger: CCAAATTTTCTCATGATCTCACCTATACTTTGGGGA...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGCAGAAAACCAAACACTaGGTATTCTCACTTATAAGT +
Preference number: 2 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALQKTKH*VFSLIS
Trigger: ACTTATAAGTGAGAATACGCAGTGTTTGGTTTTCTG...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGAATGGGGCTTTAGTATaGATGATAAGAAGGTCTAAT +
Preference number: 2 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALNGALV*MIRRSN
Trigger: ATTAGACCTTCTTATCATCCATACTAAAGCCCCATT...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGAAAAGAGCAAAGATGTaGAATCAACCCAAATGCCCA +
Preference number: 2 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLKRAKM*NQPKCP
Trigger: TGGGCATTTGGGTTGATTCCACATCTTTGCTCTTTT...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp GTTTGTAGAAAGATCATGCAAATTCCGCTTTTAGTACAGTTAGCCTaGCAGGTGACTCCAAGGAACTTTGAAGCTCTCTTTACCAAAACT +
Preference number: 2 (lower is better)
Translates to: VCRKIMQIPLLVQLA*QVTPRNFEALFTKT
Trigger: AGTTTTGGTAAAGAGAGCTTCAAAGTTCCTTGGAGTCACCTGCAAGGCTAACTGTACTAAAAGCGGAATTTGCATGATCTTTCTACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR TCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGTACAGCACAATAACTTaGCCAGAATACCACAAATCT +
Preference number: 2 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWYSTIT*PEYHKS
Trigger: AGATTTGTGGTATTCTGGTCAAGTTATTGTGCTGTA...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR TCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTAACCCTGAATTTGGTTaGTTTGGATTAAGTGACGCA +
Preference number: 2 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLNPEFG*FGLSDA
Trigger: TGCGTCACTTAATCCAAATCAACCAAATTCAGGGTT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
3UTR-3UTR TCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGGGGAAATGACACTGTaGGTGGCAGAGAAAATACTA +
Preference number: 2 (lower is better)
Translates to: SIARLGELIHSGFEIFEEGEMTL*VAEKIL
Trigger: TAGTATTTTCTCTGCCACTCACAGTGTCATTTCCCC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGTGGGGACTTATGTGGTaGCATATGAATTTTAGAATT +
Preference number: 2 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLWGLMW*HMNFRI
Trigger: AATTCTAAAATTCATATGGCACCACATAAGTCCCCA...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR TCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTTACAGCACAATAACTTaGCCAGAATACCACAAATCT +
Preference number: 2 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLYSTIT*PEYHKS
Trigger: AGATTTGTGGTATTCTGGTCAAGTTATTGTGCTGTA...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
3UTR-3UTR GCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTCCCAACTTTCTTCCATaGAACAGATATGAAGATCTA +
Preference number: 2 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLPNFLP*NRYEDL
Trigger: TAGATCTTCATATCTGTTGCATGGAAGAAAGTTGGG...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
3UTR-3UTR GCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGCACATAGTGCTAATTTaGTTACTACCAGCAGACCTA +
Preference number: 2 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWHIVLI*LLPADL
Trigger: TAGGTCTGCTGGTAGTAAGCAAATTAGCACTATGTG...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp AGATGCCAATTTCTTGGTTTATATATGATACTGCAGTTATGTAAGTaGATACCACTAGAGGAACTAGATAAAGGGCATATAGCACTTCCC +
Preference number: 2 (lower is better)
Translates to: RCQFLGLYMILQLCK*IPLEELDKGHIALP
Trigger: GGGAAGTGCTATATGCCCTTTATCTAGTTCCTCTAGTGGTATCAACTTACATAACTGCAGTATCATATATAAACCAAGAAATTGGCATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGATGAGTTCTACTAAATaGCTATTGCTTCTGTACCAC +
Preference number: 2 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWMSSTK*LLLLYH
Trigger: GTGGTACAGAAGCAATAGGCATTTAGTAGAACTCAT...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGCATCTATTATACCACTaGCATATCCCTGTACAGATT +
Preference number: 2 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWHLLYH*HIPVQI
Trigger: AATCTGTACAGGGATATGGCAGTGGTATAATAGATG...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGTTTAGAGATACCCAGTaGTATTTCATGTGCCTTTCA +
Preference number: 2 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWFRDTQ*YFMCLS
Trigger: TGAAAGGCACATGAAATAGCACTGGGTATCTCTAAA...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 90 bp AATATCTTTTTCTACAAAATTGACACAGTTTCAATCCATTTATCTTaGTGTGAATGCTTTATCCAGGCCTCAGTAATGTGCTGTGAAGCG +
Preference number: 2 (lower is better)
Translates to: NIFFYKIDTVSIHLS*CECFIQASVMCCEA
Trigger: CGCTTCACAGCACATTACTGAGGCCTGGATAAAGCATTCACACAAAGATAAATGGATTGAAACTGTGTCAATTTTGTAGAAAAAGATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR GCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGGATCTACAGAGTCAATaGAAGCACTATCAAAATCTT +
Preference number: 2 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWDLQSQ*KHYQNL
Trigger: AAGATTTTGATAGTGCTTGCATTGACTCTGTAGATC...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp ACTCCATCAGGAGGCCCACCCACTAGTGGCTTGGGATaGCTGAACTGTAAACCCCCGAAGCTGACACATGGG +
Preference number: 3 (lower is better)
Translates to: TPSGGPPTSGLG*LNCKPPKLTHG
Trigger: CCCATGTGTCAGCTTCGGGGGTTTACAGTTCAGGCATCCCAAGCCACTAGTGGGTGGGCCTCCTGATGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp ACTCTGTGGGGGAGCTCCAACCCCACATTTCCCTTCTaGACTGCCCTAGCAGAGGTTCTCCCTGAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: TLWGSSNPTFPF*TALAEVLPESS
Trigger: AGAGCTCTCAGGGAGAACCTCTGCTAGGGCAGTGCAGAAGGGAAATGTGGGGTTGGAGCTCCCCCACAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp GGACTATGGCCCTCTTCTCAGAGCTCCACTATACAGTaGCCCAGTGAAGACTCTGTGGGGGAGCTCCAACCC +
Preference number: 3 (lower is better)
Translates to: GLWPSSQSSTIQ*PSEDSVGELQP
Trigger: GGGTTGGAGCTCCCCCACAGAGTCTTCACTGGGGCACTGTATAGTGGAGCTCTGAGAAGAGGGCCATAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp GTGGTAGGCGCCTATAATCCCAGCTACTCGGGAGGCTaGGGCAAGAGAATCCCTTTAACTCGGGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: VVGAYNPSYSGG*GKRIPLTREAE
Trigger: CTCTGCCTCCCGAGTTAAAGGGATTCTCTTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGGCGCCTACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp GCAGCCACCCTCACAGCTCTTTTCATGGGCTGGTGTTaGGTGCCAGTGGCTTTTCCAGGTGCATGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: AATLTALFMGWC*VPVAFPGAWCK
Trigger: CTTGCACCATGCACCTGGAAAAGCCACTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGAGGGTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp CTTAGGCTCCATGTCTCACATCTATCCAGGTCACAATaGTGCAAGGGGTGGGCTCCCACAGCCTTGGGCAGC +
Preference number: 3 (lower is better)
Translates to: LRLHVSHLSRSQ*CKGWAPTALGS
Trigger: GCTGCCCAAGGCTGTGGGAGCCCACCCCTTGCATCATTGTGACCTGGATAGATGTGAGACATGGAGCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp AACTTTGCATGTCTCCCTCTCTCCTCTACCTTGGCTTaGTCCCTGCACACGGCCCAAACCCTGACAGCGAGT +
Preference number: 3 (lower is better)
Translates to: NFACLPLSSTLA*SLHTAQTLTAS
Trigger: ACTCGCTGTCAGGGTTTGGGCCGTGTGCAGGGAGCAAGCCAAGGTAGAGGAGAGAGGGAGACATGCAAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp ATGGCTTCGGAGGCCTCAGGAGACTTACAATCATGGTaGAAGGCCCCTCTTCACAGGGTGGCAGGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: MASEASGDLQSW*KAPLHRVAGER
Trigger: TCTCTCTCCTGCCACCCTGTGAAGAGGGGCCTTCCACCATGATTGTAAGTCTCCTGAGGCCTCCGAAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp ATTTCCCTTCTGCACTGCCCTAGCAGAGGTTCTCCCTaGGAGCTCTACCCCTGCAGCAGACTTCTGTCTGGA +
Preference number: 3 (lower is better)
Translates to: ISLLHCPSRGSP*ELYPCSRLLSG
Trigger: TCCAGACAGAAGTCTGCTGCAGGGGTAGAGCTCTCAGGGAGAACCTCTGCTAGGGCAGTGCAGAAGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp ACCCCCGAAGCTGACACATGGGTGCTCCCAAAACTTTaGATGTCTCCCTCTCTCCTCTACCTTGGCTTGCTC +
Preference number: 3 (lower is better)
Translates to: TPEADTWVLPKL*MSPSLLYLGLL
Trigger: GAGCAAGCCAAGGTAGAGGAGAGAGGGAGACATGCAAAGTTTTGGGAGCACCCATGTGTCAGCTTCGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp CTTTGCAGGATGCAGCCACCCTCACAGCTCTTTTCATaGGCTGGTGTTGAGTGCCAGTGGCTTTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: LCRMQPPSQLFS*AGVECQWLFQV
Trigger: CACCTGGAAAAGCCACTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGAGGGTGGCTGCATCCTGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp CCACCCTCACAGCTCTTTTCATGGGCTGGTGTTGAGTaGCAGTGGCTTTTCCAGGTGCATGGTGCAAGCTAT +
Preference number: 3 (lower is better)
Translates to: PPSQLFSWAGVE*QWLFQVHGASY
Trigger: ATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp AAGTGGCGCTTTCCCATTCTCTCTCCTGCTGCCACGTaGAAAAGGTCCTTGCTTCCCCTTCATCTTCTGCCA +
Preference number: 3 (lower is better)
Translates to: KWRFPILSPAAT*KRSLLPLHLLP
Trigger: TGGCAGAAGATGAAGGGGAAGCAAGGACCTTTTCCACGTGGCAGCAGGAGAGAGAATGGGAAAGCGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp CAGTGGCTTTTCCAGGTGCATGGTGCAAGCTATTGGTaGATCTACCATTCTGGGGTCTGGAGGACTATGGCC +
Preference number: 3 (lower is better)
Translates to: QWLFQVHGASYW*IYHSGVWRTMA
Trigger: GGCCATAGTCCTCCAGACCCCAGAATGGTAGATCCACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp GTGCATGCAGAAGCAGGCAGCTTGACTCTGTGGGAATaGGAGAAGGCACAAAAACTTGAGCACTTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: VHAEAGSLTLWE*EKAQKLEHFRA
Trigger: TGCCCTGAAGTGCTCAAGTTTTTGTGCCTTCTCCCATTCCCACAGAGTCAAGCTGCCTGCTTCTGCATGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp TGCCAGTGGCTTTTCCAGGTGCATGGTGCAAGCTATTaGTGGATCTACCATTCTGGGGTCTGGAGGACTATG +
Preference number: 3 (lower is better)
Translates to: CQWLFQVHGASY*WIYHSGVWRTM
Trigger: CATAGTCCTCCAGACCCCAGAATGGTAGATCCACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp CTGGCCTATAATGGGAGAGGCTGCAGTGAAGGTCTCTaGCATGCCCTAGAGACATTCTCCCCATTGTTTTGG +
Preference number: 3 (lower is better)
Translates to: LAYNGRGCSEGL*HALETFSPLFW
Trigger: CCAAAACAATGGGGAGAATGTCTCTAGGGCATGTCAGAGACCTTCACTGCAGCCTCTCCCATTATAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp TCCCTGAGAGCTCTACCCCTGCAGCAGACTTCTGTCTaGACATCCAGGCATTTCCATACATCCTCTGAAATC +
Preference number: 3 (lower is better)
Translates to: SLRALPLQQTSV*TSRHFHTSSEI
Trigger: GATTTCAGAGGATGTATGGAAATGCCTGGATGTCCAGACAGAAGTCTGCTGCAGGGGTAGAGCTCTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGTGTAATCCCAGCGCTTaGGGAGGCCGAGGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLCNPSA*GGRGRW
Trigger: CCACCTTCCTCGGCCTCCCAAAGCGCTGGGATTACA...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCATAGCTAATGCATGCTaGGCTGAACACCTCAGTGAT +
Preference number: 3 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCIANAC*AEHLSD
Trigger: ATCACTGAGGTGTTCAGCCAAGCATGCATTAGCTAT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp AGAATGCTGGGGGTAAAGGATTCTTCCTGGGCATTTTaGCTCCATCCTATTAACGCAGGCATCCCTGAGACC +
Preference number: 3 (lower is better)
Translates to: RMLGVKDSSWAF*LHPINAGIPET
Trigger: GGTCTCAGGGATGCCTGCGTTAATAGGATGGAGTCAAAATGCCCAGGAAGAATCCTTTACCCCCAGCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp CTAATGCATGCTTGGCTGAACACCTCAGTGATGGGTTaGAGGTGCAGCAAACCACCATGGCACATGTTTACC +
Preference number: 3 (lower is better)
Translates to: LMHAWLNTSVMG*RCSKPPWHMFT
Trigger: GGTAAACATGTGCCATGGTGGTTTGCTGCACCTTCAACCCATCACTGAGGTGTTCAGCCAAGCATGCATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp CCATTCTCTCTCCTGCTGCCACGTGGAAAAGGTCCTTaGTTCCCCTTCATCTTCTGCCATGATGGTAAGTTT +
Preference number: 3 (lower is better)
Translates to: PFSLLLPRGKGP*FPFIFCHDGKF
Trigger: AAACTTACCATCATGGCAGAAGATGAAGGGGAAGCAAGGACCTTTTCCACGTGGCAGCAGGAGAGAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp CTCCTTTCCCAGACATCACTTGCATACCAGGGGCTCTaGCCCTCATTGTCCAGCTACACTAGGCTAATTAAT +
Preference number: 3 (lower is better)
Translates to: LLSQTSLAYQGL*PSLSSYTRLIN
Trigger: ATTAATTAGCCTAGTGTAGCTGGACAATGAGGGGCAGAGCCCCTGGTATGCAAGTGATGTCTGGGAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp TCTCCATTGGGTGAAAGGGAGAGTGTAGTAAATGAATaGCTGGCTTTCCTAGCCACGTGGGACACTGACCAA +
Preference number: 3 (lower is better)
Translates to: SPLGERESVVNE*LAFLATWDTDQ
Trigger: TTGGTCAGTGTCCCACGTGGCTAGGAAAGCCAGGCATTCATTTACTACACTCTCCCTTTCACCCAATGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp TTCTGTGCTCCTGCAAGCCCAACACCATGTGTAAGCTaGCAAAGCTTGGGGATTGCACTCTCTGAAACAATG +
Preference number: 3 (lower is better)
Translates to: FCAPASPTPCVS*QSLGIALSETM
Trigger: CATTGTTTCAGAGAGTGCAATCCCCAAGCTTTGGCAGCTTACACATGGTGTTGGGCTTGCAGGAGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp CTCAAAGTCCCGAGGATCAACAGCCTCAGCATCACCTaGAAACTTGTTAGAAATGCCAAGTTTTGGGCCCAC +
Preference number: 3 (lower is better)
Translates to: LKVPRINSLSIT*KLVRNAKFWAH
Trigger: GTGGGCCCAAAACTTGGCATTTCTAACAAGTTTCCAGGTGATGCTGAGGCTGTTGATCCTCGGGACTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp CTGAAATCTAGGCAGAGGTTCCCAAACCTCAATTCTTaGCTTCTGTGCTCCTGCAAGCCCAACACCATGTGT +
Preference number: 3 (lower is better)
Translates to: LKSRQRFPNLNS*LLCSCKPNTMC
Trigger: ACACATGGTGTTGGGCTTGCAGGAGCACAGAAGTCAAGAATTGAGGTTTGGGAACCTCTGCCTAGATTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp AGTGTAGTAAATGAATGCCTGGCTTTCCTAGCCACGTaGGACACTGACCAAGAGGCCTACTTCTTTCTATCC +
Preference number: 3 (lower is better)
Translates to: SVVNECLAFLAT*DTDQEAYFFLS
Trigger: GGATAGAAAGAAGTAGGCCTCTTGGTCAGTGTCCCACGTGGCTAGGAAAGCCAGGCATTCATTTACTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGTTTCCCAGACATCACTaGCATACCAGGGGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLFPRHH*HTRGSA
Trigger: GGCAGAGCCCCTGGTATGCAAGTGATGTCTGGGAAA...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp GCCATGATGGTAAGTTTCCTGAGGCCTCCCCAGCCATaGAGAACTGTGAGTCAATTAAACCTCTTTCCTTTA +
Preference number: 3 (lower is better)
Translates to: AMMVSFLRPPQP*RTVSQLNLFPL
Trigger: TAAAGGAAAGAGGTTTAATTGACTCACAGTTCTGCATGGCTGGGGAGGCCTCAGGAAACTTACCATCATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp ATAGTGAGGAAGTTCTCACTAAATCTGTTTGATAAGTaGCGCTTTCCCATTCTCTCTCCTGCTGCCACGTGG +
Preference number: 3 (lower is better)
Translates to: IVRKFSLNLFDK*RFPILSPAATW
Trigger: CCACGTGGCAGCAGGAGAGAGAATGGGAAAGCGCCACTTATCAAACAGATTTAGTGAGAACTTCCTCACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGACGTGGAAAAGGTCCTaGCTTCCCCTTCATCTTCTG +
Preference number: 3 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLTWKRS*LPLHLL
Trigger: CAGAAGATGAAGGGGAAGCAAGGACCTTTTCCACGT...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGAGAGCCACATGGATTTaGAACTTGACTGCTCCATTC +
Preference number: 3 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALRATWI*NLTAPF
Trigger: GAATGGAGCAGTCAAGTTCAAAATCCATGTGGCTCT...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp CTTGACTCTGTGGGAATGGGAGAAGGCACAAAAACTTaGGCACTTCAGGGCACCACGTTAGAGAAAACAAAT +
Preference number: 3 (lower is better)
Translates to: LDSVGMGEGTKT*ALQGTTLEKTN
Trigger: ATTTGTTTTCTCTAACGTGGTGCCCTGAAGTGCTCAAGTTTTTGTGCCTTCTCCCATTCCCACAGAGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp TCCCCACTATCTACAATTTTGACAACCACTCAAGTATaGGAGTACCTTTGTGGGAGTCTGGTAGTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: SPLSTILTTTQV*EYLCGSLVVQL
Trigger: GAGCTGGACTACCAGACTCCCACAAAGGTACTCTCATACTTGAGTGGTTGTCAAAATTGTAGATAGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp CACTTCCCTCTCAGTCCTTTAAGGATTCCATGGCAATaGGCATGTCCTCTCTTTGGATACAAACAAAACTCC +
Preference number: 3 (lower is better)
Translates to: HFPLSPLRIPWQ*ACPLFGYKQNS
Trigger: GGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAATCCTTAAAGGACTGAGAGGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp TTCTGTCTGGACATCCAGGCATTTCCATACATCCTCTaGAATCTAGGCAGAGGTTCCCAAACCTCAATTCTT +
Preference number: 3 (lower is better)
Translates to: FCLDIQAFPYIL*NLGRGSQTSIL
Trigger: AAGAATTGAGGTTTGGGAACCTCTGCCTAGATTTCAGAGGATGTATGGAAATGCCTGGATGTCCAGACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp GAGACCATCTGTATTGACTGTTCTCAAAGTGTTCATTaGCAGACAATGCAGCTTTGGGGAGCTAGAGAAAAG +
Preference number: 3 (lower is better)
Translates to: ETICIDCSQSVH*QTMQLWGAREK
Trigger: CTTTTCTCTAGCTCCCCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp AGCATCACCTGGAAACTTGTTAGAAATGCCAAGTTTTaGGCCCACACAAGACTCACTCAATCAGAAACTCTG +
Preference number: 3 (lower is better)
Translates to: SITWKLVRNAKF*AHTRLTQSETL
Trigger: CAGAGTTTCTGATTGAGTGAGTCTTGTGTGGGCCCAAAACTTGGCATTTCTAACAAGTTTCCAGGTGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp TTTAAGGATTCCATGGCAATGAGCATGTCCTCTCTTTaGATACAAACAAAACTCCTGGGAGGGGGAATTGGA +
Preference number: 3 (lower is better)
Translates to: FKDSMAMSMSSL*IQTKLLGGGIG
Trigger: TCCAATTCCCCCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAATCCTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp ATGAGATCATGTCATTTTCAGGGACACACATGGCGCTaGAAGCCATTATTCTTAGCAAGCTATTGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: MRSCHFQGHTWR*KPLFLASYCRN
Trigger: GTTCCTGCAATAGCTTGCTAAGAATAATGGCTTCCAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp GTACCTTTGTGGGAGTCTGGTAGTCCAGCTCACAGATaGAGCAAAACAATTACGAGAATAGGCACATTGAAA +
Preference number: 3 (lower is better)
Translates to: VPLWESGSPAHR*SKTITRIGTLK
Trigger: TTTCAATGTGCCTATTCTCGTAATTGTTTTGCTCCATCTGTGAGCTGGACTACCAGACTCCCACAAAGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp AATTTTGACAACCACTCAAGTATGAGAGTACCTTTGTaGGAGTCTGGTAGTCCAGCTCACAGATGGAGCAAA +
Preference number: 3 (lower is better)
Translates to: NFDNHSSMRVPL*ESGSPAHRWSK
Trigger: TTTGCTCCATCTGTGAGCTGGACTACCAGACTCCCACAAAGGTACTCTCATACTTGAGTGGTTGTCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp CAAGCTAGCAGAACTCAACACCAAGAGATACAACTTTaGCTCATGATTTCTCCATTGGGTGAAAGGGAGAGT +
Preference number: 3 (lower is better)
Translates to: QASRTQHQEIQL*LMISPLGERES
Trigger: ACTCTCCCTTTCACCCAATGGAGAAATCATGAGTCAAAGTTGTATCTCTTGGTGTTGAGTTCTGCTAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp GCTAAGGTCTTTGAAAAACTCTTCGGTGAGCTTGACTaGCTTAAAACTGGAACAAATGTACTGGTTAGGGAG +
Preference number: 3 (lower is better)
Translates to: AKVFEKLFGELD*LKTGTNVLVRE
Trigger: CTCCCTAACCAGTACATTTGTTCCAGTTTTAAGCCAGTCAAGCTCACCGAAGAGTTTTTCAAAGACCTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp AAAGGAATGAGATCATGTCATTTTCAGGGACACACATaGCGCTGGAAGCCATTATTCTTAGCAAGCTATTGC +
Preference number: 3 (lower is better)
Translates to: KGMRSCHFQGHT*RWKPLFLASYC
Trigger: GCAATAGCTTGCTAAGAATAATGGCTTCCAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp ATGTGCAAGAGTCTTAGTATCCCCAGTCAGGCTAACTaGTATAACTGTTTCTCTTCTGAAGCCAGTCAGTAT +
Preference number: 3 (lower is better)
Translates to: MCKSLSIPSQAN*YNCFSSEASQY
Trigger: ATACTGACTGGCTTCAGAAGAGAAACAGTTATACCAGTTAGCCTGACTGGGGATACTAAGACTCTTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp GACTCTGCCAGTGAAGGCACATTTCAATTTTACCCATaGATGACATCGCATCTAAATGAGGCTTCTAAGACA +
Preference number: 3 (lower is better)
Translates to: DSASEGTFQFYP*MTSHLNEASKT
Trigger: TGTCTTAGAAGCCTCATTTAGATGCGATGTCATTCATGGGTAAAATTGAAATGTGCCTTCACTGGCAGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp CTCTACTGCAATGTTAATAGACGCTCCATGAAAATGTaGCTTTGTGGCCCAATAAGTTTGTCTCAGCATTTG +
Preference number: 3 (lower is better)
Translates to: LYCNVNRRSMKM*LCGPISLSQHL
Trigger: CAAATGCTGAGACAAACTTATTGGGCCACAAAGCCACATTTTCATGGAGCGTCTATTAACATTGCAGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGTCTACCCAAGTGAAATaGGTGAAATCCCACTTGATT +
Preference number: 3 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLSTQVK*VKSHLI
Trigger: AATCAAGTGGGATTTCACCAATTTCACTTGGGTAGA...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGTATTCCACATGGTACTaGAAGTTCTGCTTAGAGCAA +
Preference number: 3 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLYSTWY*KFCLEQ
Trigger: TTGCTCTAAGCAGAACTTCAAGTACCATGTGGAATA...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAAGTTCACTAAAATGCTaGGCATTCTTATGCACAAGC +
Preference number: 3 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQSSLKC*AFLCTS
Trigger: GCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
3UTR TCA 72 bp GCTCTCTTTACCAAAACTTCCCTAAGAACAGCAACATaGCTTGTTTATTTAGTGTCCTGCTACACACACACA +
Preference number: 3 (lower is better)
Translates to: ALFTKTSLRTAT*LVYLVSCYTHT
Trigger: TGTGTGTGTGTAGCAGGACACTAAATAAACAAGTCATGTTGCTGTTCTTAGGGAAGTTTTGGTAAAGAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp TGGACAGATCACCCAGACAGAAAATCAATAGGGAATTaGCTTGAACTACACTTTAGACCAAATGGACCTAAC +
Preference number: 3 (lower is better)
Translates to: WTDHPDRKSIGN*LELHFRPNGPN
Trigger: GTTAGGTCCATTTGGTCTAAAGTGTAGTTCAAGTCAATTCCCTATTGATTTTCTGTCTGGGTGATCTGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp CATGCAACTCTATGCCAAGAACCCAACTTTCTTCCATaGAACAGATATGAAGATCTAAATGGAAACCTAGCT +
Preference number: 3 (lower is better)
Translates to: HATLCQEPNFLP*NRYEDLNGNLA
Trigger: AGCTAGGTTTCCATTTAGATCTTCATATCTGTTGCATGGAAGAAAGTTGGGTTCTTGGCATAGAGTTGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
3UTR GCA 72 bp TCTTTGTGTGAATGCTTTATCCAGGCCTCAGTAATGTaGTGTGAAGCGCTGACAGTATTTAAGGTCATAAAT +
Preference number: 3 (lower is better)
Translates to: SLCECFIQASVM*CEALTVFKVIN
Trigger: ATTTATGACCTTAAATACTGTCAGCGCTTCACAGCACATTACTGAGGCCTGGATAAAGCATTCACACAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp CCAAAGGAAATTAAATCAGTATGCCAAACAGACATCTaGACTCCCATTCATTCCCATTGCACCATTATTCAC +
Preference number: 3 (lower is better)
Translates to: PKEIKSVCQTDI*TPIHSHCTIIH
Trigger: GTGAATAATGGTGCAATGGGAATGAATGGGAGTGCAGATGTCTGTTTGGCATACTGATTTAATTTCCTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAATGTCACTGACAAATTaGAACTTTTGGGTGAAGGAC +
Preference number: 3 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSMSLTN*NFWVKD
Trigger: GTCCTTCACCCAAAAGTTCAAATTTGTCAGTGACAT...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
3UTR-3UTR CAA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAGTGGGAGAGCAAATTTaGATCAGCATTAGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQVGEQI*ISISAV
Trigger: CACAGCACTAATGCTGATCAAAATTTGCTCTCCCAC...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
3UTR-3UTR CAA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGCAGAGACCATCTGTATaGACTGTTCTCAAAGTGTTC +
Preference number: 3 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWQRPSV*TVLKVF
Trigger: GAACACTTTGAGAACAGTCAATACAGATGGTCTCTG...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGCCCTCATATGTTCATTaGGACAATGGATGCTTGGTA +
Preference number: 3 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWPSYVH*DNGCLV
Trigger: TACCAAGCATCCATTGTCCAAATGAACATATGAGGG...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp TTCAGTATACTATTACTTGTAGCATTCTCAATCGTGTaGAACCATGAGACCACATCTTTGTGGACAGAGCAA +
Preference number: 3 (lower is better)
Translates to: FSILLLVAFSIV*NHETTSLWTEQ
Trigger: TTGCTCTGTCCACAAAGATGTGGTCTCATGGTTTCACACGATTGAGAATGCTACAAGTAATAGTATACTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp TCCACATTGTGTGTTCTAGAAAGACTTCCTGCATTGTaGCAGAATTGCAACTGTTACAAACTTCTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: STLCVLERLPAL*QNCNCYKLLPV
Trigger: TACTGGAAGAAGTTTGTAACAGTTGCAATTCTGTCACAATGCAGGAAGTCTTTCTAGAACACACAATGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp GTGATTTCTCCGAGATCTAGAACCAGAAATAACATTTaGCCCAGCAATCCCATTACTAGGTATATACCCAAA +
Preference number: 3 (lower is better)
Translates to: VISPRSRTRNNI*PSNPITRYIPK
Trigger: TTTGGGTATATACCTAGTAATGGGATTGCTGGGTCAAATGTTATTTCTGGTTCTAGATCTCGGAGAAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp ACACAACAGTTTGGATGCATCTCAAGGGAATTGTGCTaGGTGACAAAAGCCAATCTCTATGTGTTATATACT +
Preference number: 3 (lower is better)
Translates to: TQQFGCISRELC*VTKANLYVLYT
Trigger: AGTATATAACACATAGAGATTGGCTTTTGTCACTCAGCACAATTCCCTTGAGATGCATCCAAACTGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGAGCATGTCCTCTCTTaGGATACAAACAAAACTCCT +
Preference number: 3 (lower is better)
Translates to: SIARLGELIHSGFEIFEEEHVLS*DTNKTP
Trigger: AGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp ACTATTACTTGTAGCATTCTCAATCGTGTGAAACCATaGGACCACATCTTTGTGGACAGAGCAATAAAAGTT +
Preference number: 3 (lower is better)
Translates to: TITCSILNRVKP*DHIFVDRAIKV
Trigger: AACTTTTATTGCTCTGTCCACAAAGATGTGGTCTCATGGTTTCACACGATTGAGAATGCTACAAGTAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp ACATCACAGCATTTATTGCAATCTAAGTGTGATGCTTaGATGTCTATCTACCACTTTACACTGAGAGTTTGT +
Preference number: 3 (lower is better)
Translates to: TSQHLLQSKCDA*MSIYHFTLRVC
Trigger: ACAAACTCTCAGTGTAAAGTGGTAGATAGACATGCAAGCATCACACTTAGATTGCAATAAATGCTGTGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR-3UTR CAA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAATGTCACTGACAAATTaGAACTTTTGGGTGAAGGAC +
Preference number: 3 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVMSLTN*NFWVKD
Trigger: GTCCTTCACCCAAAAGTTCAAATTTGTCAGTGACAT...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
3UTR-3UTR CAA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGTTCACTAAAATGCTaGGCATTCTTATGCACAAGC +
Preference number: 3 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDSSLKC*AFLCTS
Trigger: GCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACT...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
3UTR-3UTR CAA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGTTTTGTTGTGGATTTTaGCATCTATGTTCAACAGGG +
Preference number: 3 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWFCCGF*HLCSTG
Trigger: CCCTGTTGAACATAGATGCAAAAATCCACAACAAAA...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp CTACTGAACGGGAATGTGAATTCCTTTGTACCAATCTaGAGTGCAAGTACAGTAACTAGTAAAATAAACACA +
Preference number: 3 (lower is better)
Translates to: LLNGNVNSFVPI*SASTVTSKINT
Trigger: TGTGTTTATTTTACTAGTTACTGTACTTGCACTTCAGATTGGTACAAAGGAATTCACATTCCCGTTCAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR GCA 72 bp ATGAATGCACAAAATCTTACATATCATGCAACTCTATaGCAAGAACCCAACTTTCTTCCATGCAACAGATAT +
Preference number: 3 (lower is better)
Translates to: MNAQNLTYHATL*QEPNFLPCNRY
Trigger: ATATCTGTTGCATGGAAGAAAGTTGGGTTCTTGGCATAGAGTTGCATGATATGTAAGATTTTGTGCATTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
3UTR GCA 72 bp AAAATCATCCACATTGTGTGTTCTAGAAAGACTTCCTaGATTGTGACAGAATTGCAACTGTTACAAACTTCT +
Preference number: 3 (lower is better)
Translates to: KIIHIVCSRKTS*IVTELQLLQTS
Trigger: AGAAGTTTGTAACAGTTGCAATTCTGTCACAATGCAGGAAGTCTTTCTAGAACACACAATGTGGATGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR TCA 72 bp AGTAAATTAGTTCAAACATTGTGGAAGACAGTGTGGTaGTTTCTCCGAGATCTAGAACCAGAAATAACATTT +
Preference number: 3 (lower is better)
Translates to: SKLVQTLWKTVW*FLRDLEPEITF
Trigger: AAATGTTATTTCTGGTTCTAGATCTCGGAGAAATCACCACACTGTCTTCCACAATGTTTGAACTAATTTACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CCA 72 bp ATAAAATGCATGCAAATCAGGACGGAAGAAGTAAAATaGTCTGTTTCAAATCACATGCTCTTCAATACAGAA +
Preference number: 3 (lower is better)
Translates to: IKCMQIRTEEVK*SVSNHMLFNTE
Trigger: TTCTGTATTGAAGAGCATGTGATTTGAAACAGACCATTTTACTTCTTCCGTCCTGATTTGCATGCATTTTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp GCTCCCACAGCCTTGGGCAGCTCTTCCCCTGTGGCTTaGCAGGATGCAGCCACCCTCACAGCTCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: APTALGSSSPVA*QDAATLTALFM
Trigger: CATGAAAAGAGCTGTGAGGGTGGCTGCATCCTGCAAAGCCACAGGGGAAGAGCTGCCCAAGGCTGTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCACCCCCTCGCCCTGTTaGCCTTCTGATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCTPSPC*PSDGGQ
Trigger: CTGGCCCCCATCAGAAGGGCAACAGGGCGAGGGGGT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCGCTTTTCCCCACCGCTaGCGCCGCCGCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPAFPHR*RRRRCL
Trigger: CAGGCAGCGGCGGCGGCGGCAGCGGTGGGGAAAAGC...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000626909.2
CDS-3UTR CCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCGGGCTCCCACAGCCTTaGGCAGCTCTTCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCGLPQP*AALPLW
Trigger: CCACAGGGGAAGAGCTGCCCAAGGCTGTGGGAGCCC...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGGGAGGGGGCTCAGCATaGCGTCCGAGCTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALGGGSA*RPSSSG
Trigger: GCCGGAGGAGCTCGGACGGCATGCTGAGCCCCCTCC...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCGCTTTTCCCCACCGCTaGCGCCGCCGCCGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAAFPHR*RRRRCL
Trigger: TAGGCAGCGGCGGCGGCGGCAGCGGTGGGGAAAAGC...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441825.8
3UTR CAA 72 bp AAACTTTGCATGTCTCCCTCTCTCCTCTACCTTGGCTaGCTCCCTGCACACGGCCCAAACCCTGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: KLCMSPSLLYLG*LPAHGPNPDSE
Trigger: CTCGCTGTCAGGGTTTGGGCCGTGTGCAGGGAGCAAGCCAAGGTAGAGGAGAGAGGGAGACATGCAAAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp TCACAGACTCCATCAGGAGGCCCACCCACTAGTGGCTaGGGATGCCTGAACTGTAAACCCCCGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: SQTPSGGPPTSG*GCLNCKPPKLT
Trigger: TGTCAGCTTCGGGGGTTTACAGTTCAGGCATCCCAAGCCACTAGTGGGTGGGCCTCCTGATGGAGTCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTGCCGCCGCCGCCGCTaGCTGCTCTCTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPCRRRR*LLSFSL
Trigger: GAGAGAGAAAGAGAGCAGGCAGCGGCGGCGGCGGCA...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000626909.2
CDS-3UTR CCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGGGGCTGCTGGCTGCCTaGGTCGGAGTCGACGCCACA +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRGLLAA*VGVDAT
Trigger: TGTGGCGTCGACTCCGACCCAGGCAGCCAGCAGCCC...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp TGCAGCCACCCTCACAGCTCTTTTCATGGGCTGGTGTaGAGTGCCAGTGGCTTTTCCAGGTGCATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: CSHPHSSFHGLV*SASGFSRCMVQ
Trigger: TTGCACCATGCACCTGGAAAAGCCACTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGAGGGTGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGCTGGCACGCGGATGCTaGACTGCGCGACTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALLARGC*TARLRV
Trigger: CACACGCAGTCGCGCAGTTCAGCATCCGCGTGCCAG...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGCTTTTCCCCACCGCTaGCGCCGCCGCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSAFPHR*RRRRCL
Trigger: CAGGCAGCGGCGGCGGCGGCAGCGGTGGGGAAAAGC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000626909.2
CDS-3UTR TCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCGTGAGATCGTGCAGTaGTGGCTCCTTGTACATGGC +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLREIVQ*WLLVHG
Trigger: GCCATGTACAAGGAGCCATCACTGCACGATCTCACG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACGCCAGAGACACTTCTaGTCTTGGTTGGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSRQRHF*SWLGSR
Trigger: GCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCG...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTCGCATCTTCGCTGTTaGTGCTGCTCTGGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFASHLRC*CCSGRG
Trigger: GCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGCTGAACTGCGCGACTaGGTGTGGTCGGCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLAELRD*VWSAPA
Trigger: CGCAGGGGCCGACCACACGCAGTCGCGCAGTTCAGC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGGGAGTCTCCCCTCCTTaGAAAAGCAGGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLGVSPP*KSRLFG
Trigger: CCCAAACAGCCTGCTTTTGCAAGGAGGGGAGACTCC...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCCCCACATTTCCCTTCTaGACTGCCCTAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCPTFPF*TALAEV
Trigger: AACCTCTGCTAGGGCAGTGCAGAAGGGAAATGTGGG...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGTGGGCTGGTGTTGAGTaGCAGTGGCTTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLWAGVE*QWLFQV
Trigger: CACCTGGAAAAGCCACTGGCACTCAACACCAGCCCA...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp GTGCCAGTGGCTTTTCCAGGTGCATGGTGCAAGCTATaGGTGGATCTACCATTCTGGGGTCTGGAGGACTAT +
Preference number: 4 (lower is better)
Translates to: VPVAFPGAWCKL*VDLPFWGLEDY
Trigger: ATAGTCCTCCAGACCCCAGAATGGTAGATCCACCAATAGCTTGCACCATGCACCTGGAAAAGCCACTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTTTGCTGGGGCTGCTaGCACACTTGCAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFALCWGC*HTCRRW
Trigger: CCAACGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCTGCAGTGAAGGTCTCTaGCATGCCCTAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCCSEGL*HALETF
Trigger: GAATGTCTCTAGGGCATGTCAGAGACCTTCACTGCA...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGAGCAGAGGTTCTCCCTaGGAGCTCTACCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRSRGSP*ELYPCS
Trigger: GCTGCAGGGGTAGAGCTCTCAGGGAGAACCTCTGCT...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCGCCAGAGACACTTCTaGTCTTGGTTGGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFARQRHF*SWLGSR
Trigger: GCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGGCCGCCGCCGCTGCCTaGTCTCTTTCTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRAAAAA*SLSLSP
Trigger: GGGAGAGAGAGAAAGAGAGCAGGCAGCGGCGGCGGC...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000626909.2
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATCGGACTTGGGAGAGTaGTTAGGGCGGCAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSSDLGE*LGRQVS
Trigger: CGAGACTTGCCGCCCTAAGCACTCTCCCAAGTCCGA...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGCTGTTGCTGCTGCTCTaGGCGCGGCACAGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRLLLLL*ARHSRS
Trigger: GCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAG...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTAGCGCGCCCTCGCCCTaGCCCCTCCGAGTCTTCGAC +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLSAPSP*PLRVFD
Trigger: GTCGAAGACTCGGAGGGGCCAGGGCGAGGGCGCGCT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCGGGTCTGGAGGACTATaGCCCTCTTCTCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPGSGGL*PSSQSS
Trigger: GGAGCTCTGAGAAGAGGGCCATAGTCCTCCAGACCC...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGGAGCTCCCCTCGGTGTaGTTCGGGGCGGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRELPSV*FGAESA
Trigger: AGCGGATTCCGCCCCGAACCACACCGAGGGGAGCTC...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCGGCCTGACTGCTGCTaGCGGTATATCATTGATGAA +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLRPDCC*RYIIDE
Trigger: TTCATCAATGATATACCGTCAGCAGCAGTCAGGCCG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACGTGAGATCGTGCAGTaGTGGCTCCTTGTACATGGC +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSREIVQ*WLLVHG
Trigger: GCCATGTACAAGGAGCCATCACTGCACGATCTCACG...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCCTCACTGGCTACGTTaGTTCATTGTGGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLPHWLR*FIVAHG
Trigger: TCCATGAGCCACAATGAATCAACGTAGCCAGTGAGG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCCATGAAATTACAAGGTaGCTTAGACTGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCHEITR*LRLGWG
Trigger: ACCCCAGCCCAGTCTAAGTCACCTTGTAATTTCATG...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCGTCCAAAGTCTCATCTaGGACAAAGCAAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCVQSLI*DKASPF
Trigger: GAAGGGACTTGCTTTGTCTCAGATGAGACTTTGGAC...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTGTGGCTCATGGATTTaGCTCCGTTCAGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPCGSWI*LRSARQ
Trigger: CTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACA...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAGGAAAAGTTGGCCCGTaGCAGGTTTCCGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSGKVGP*QVSDRD
Trigger: ATCCCTGTCGGAAACCTGGCACGGGCCAACTTTTCC...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGCGCGGGCTGCTGGCTaGCTGGGTCGGAGTCGACGC +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEARAAG*LGRSRR
Trigger: GCGTCGACTCCGACCCAGGCAGCCAGCAGCCCGCGC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGCCGCCGCCGCTGCCTaGTCTCTTTCTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSAAAAA*SLSLSP
Trigger: GGGAGAGAGAGAAAGAGAGCAGGCAGCGGCGGCGGC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000626909.2
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTGCCGCCGCCGCCGCTaGCTGCTCTCTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSCRRRR*LLSFSL
Trigger: GAGAGAGAAAGAGAGCAGGCAGCGGCGGCGGCGGCA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000626909.2
CDS-3UTR GCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTCGGACTTGGGAGAGTaGTTAGGGCGGCAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFASDLGE*LGRQVS
Trigger: CGAGACTTGCCGCCCTAAGCACTCTCCCAAGTCCGA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCAGACACTTCTGCTCTTaGTTGGGGTCCCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPRHFCS*LGSRFQ
Trigger: CTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAATCCCGCGCGGGCTGCTaGCTGCCTGGGTCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQSRAGC*LPGSES
Trigger: CGACTCCGACCCAGGCAGCCAGCAGCCCGCGCGGGA...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGCAAGGTGACTTAGACTaGGCTGGGGTGGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRQGDLD*AGVGRD
Trigger: ATCCCTGCCCACCCCAGCCCAGTCTAAGTCACCTTG...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCTAATCCTAACACTTTaGGAGGTCCCAAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLLILTL*EVPRWA
Trigger: TGCCCACCTTGGGACCTCCCAAAGTGTTAGGATTAG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTATACCACCCTCGGCCTaGCTGCTGCTGACGGTATAT +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLIPPSA*LLLTVY
Trigger: ATATACCGTCAGCAGCAGTCAGGCCGAGGGTGGTAT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCATACCACCCTCGGCCTaGCTGCTGCTGACGGTATAT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAIPPSA*LLLTVY
Trigger: ATATACCGTCAGCAGCAGTCAGGCCGAGGGTGGTAT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGGGTTTAGGCAGAAAATaGGCTGCAGGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLGLGRK*AAGLFF
Trigger: GAAGAACAAGCCTGCAGCTCATTTTCTGCCTAAACC...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTATCGGGAGAACTCCGTaGGATCGTGCAGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLIGRTP*DRAVMA
Trigger: AGCCATCACTGCACGATCTCACGGAGTTCTCCCGAT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCATCGGGAGAACTCCGTaGGATCGTGCAGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAIGRTP*DRAVMA
Trigger: AGCCATCACTGCACGATCTCACGGAGTTCTCCCGAT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCACGGGCTTGCCTCTTCTaGCGGATGAGCGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSRACLF*RMSELA
Trigger: CGCCAGCTCGCTCATCCGTCAGAAGAGGCAAGCCCG...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCACTAAAGGATGTGCATaGGGGGATGGGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPTKGCA*GDGVGK
Trigger: CTTTCCCACCCCATCCCCTCATGCACATCCTTTAGT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGGTGGGAGGATCACCTaGTCCTGGGGAGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSGGRIT*SWGGQG
Trigger: GCCTTGACCTCCCCAGGATCAGGTGATCCTCCCACC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAGGAAGGTGGATCACCTaGGGTCAGGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSGRWIT*GQEFET
Trigger: AGTCTCAAACTCCTGACCTCAGGTGATCCACCTTCC...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGCTCCTTCTCCTCCGCTaGTTGTCCGCTGTCTCGCGA +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLLLLLR*LSAVSR
Trigger: TCGCGAGACAGCGGACAAGCAGCGGAGGAGAAGGAG...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGGCTCTGGTCTTCTTCTaGGCCTCTTCTTGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRALVFF*ASSWSR
Trigger: TCGGCTCCAAGAAGAGGCGCAGAAGAAGACCAGAGC...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCTTTGGTGCCATCAATaGTTCCATCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPLWCHQ*FHPPAA
Trigger: AGCTGCAGGCGGATGGAACCATTGATGGCACCAAAG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTACTTCTGCTCTTGGTTaGGGTCCCGCTTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLTSALG*GPASRS
Trigger: CGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCACTTCTGCTCTTGGTTaGGGTCCCGCTTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFATSALG*GPASRS
Trigger: CGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGAGACACTTCTGCTCTTaGTTGGGGTCCCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRRHFCS*LGSRFQ
Trigger: CTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCT...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCAGACACTTCTGCTCTTaGTTGGGGTCCCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFARHFCS*LGSRFQ
Trigger: CTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCGTCCTTGCAACTTCTTaGCGTGATAATCGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCVLATS*RDNREK
Trigger: CTTTTCCCGATTATCACGCCAAGAAGTTGCAAGGAC...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTCACACTTGCAGGCGTTaGATTTCTCGCGCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIHTCRR*ISRARG
Trigger: CCCGCGAGCGCGAGAAATCCAACGCCTGCAAGTGTG...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGGTTAATAGGGAGAGGTaGTTGAGTGAGCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLVNRER*LSEHLL
Trigger: CAGGAGATGCTCACTCAACCACCTCTCCCTATTAAC...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCCGCTCCATGAAAATGTaGCTTTGTGGCCCAATAAGT +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCRSMKM*LCGPIS
Trigger: ACTTATTGGGCCACAAAGCCACATTTTCATGGAGCG...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGACTATACCCTTAAGCTaGGGCTCTGAATACGACTTC +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLTIPLS*GSEYDF
Trigger: GAAGTCGTATTCAGAGCCTCAGCTTAAGGGTATAGT...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS-3UTR TCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGATTTGCACTCAGGTGTaGAAAGTTCCGAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLICTQV*KVPRCT
Trigger: TGTACACCTCGGAACTTTTCACACCTGAGTGCAAAT...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCGGCCTGACTGCTGCTaGCGGTATATCATTGATGAA +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPRPDCC*RYIIDE
Trigger: TTCATCAATGATATACCGTCAGCAGCAGTCAGGCCG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACCTCACTGGCTACGTTaGTTCATTGTGGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSPHWLR*FIVAHG
Trigger: TCCATGAGCCACAATGAATCAACGTAGCCAGTGAGG...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCCTCACTGGCTACGTTaGTTCATTGTGGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPPHWLR*FIVAHG
Trigger: TCCATGAGCCACAATGAATCAACGTAGCCAGTGAGG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGTTCATGGGCTGGTGTTaGGTGCCAGTGGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRFMGWC*VPVAFP
Trigger: TGGAAAAGCCACTGGCACTCAACACCAGCCCATGAA...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCAGATCCCAGCTTGCTTaGCAAGGTTCGCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPRSQLA*QGSLRR
Trigger: TCTTCTGAGCGAACCTTGTCAAGCAAGCTGGGATCT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTACTATACCCTTAAGCTaGGGCTCTTCCGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLTIPLS*GSSGSV
Trigger: CACAGAGCCGGAAGAGCCTCAGCTTAAGGGTATAGT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000441825.8
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAAACTCCGTGAGATCGTaGAGTGATGGCTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSNSVRS*SDGSLY
Trigger: GTACAAGGAGCCATCACTGCACGATCTCACGGAGTT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAACGCCAGAGACACTTCTaGTCTTGGTTGGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQRQRHF*SWLGSR
Trigger: GCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCG...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGCCCGGCGGACACCGTaGATGTCCAGCTGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVARRTP*MSSCSG
Trigger: ACCGGAGCAGCTGGACATGCACGGTGTCCGCCGGGC...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTCACCGCTTCTTTTGCTaGCCCTCTCTGGGTTCGCCT +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIHRFFC*PSLGSP
Trigger: AGGCGAACCCAGAGAGGGGCAGCAAAAGAAGCGGTG...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCAAACCTGCATATCCTaGACATGTACCCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLQTCIS*TCTLEL
Trigger: AAGTTCCAGGGTACATGTGCAGGATATGCAGGTTTG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCACGCATATGTTCACTaGAGCACTGTTCAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLHAYVH*STVQKS
Trigger: GCTCTTTTGAACAGTGCTGCAGTGAACATATGCGTG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCTTTGTGGTGTACTTaGTTCAGCGGGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPSLWCT*FSGQQK
Trigger: CTTCTGCTGCCCGCTGAAGCAAGTACACCACAAAGA...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000441825.8
CDS-3UTR CCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTTTTGCTGCCCCTCTCTaGGTTCGCCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIFAAPL*VRLLLL
Trigger: AAGGAGGAGGAGGCGAACCCAGAGAGGGGCAGCAAA...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTGTAATCCCAGCGCTTTaGGAGGCCGAGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIVIPAL*EAEEGG
Trigger: TCCACCTTCCTCGGCCTCCCAAAGCGCTGGGATTAC...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCGGCCTGACTGCTGCTaGCGGTATATCATTGATGAA +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFARPDCC*RYIIDE
Trigger: TTCATCAATGATATACCGTCAGCAGCAGTCAGGCCG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAGGTTTAGGCAGAAAATaGGCTGCAGGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSGLGRK*AAGLFF
Trigger: GAAGAACAAGCCTGCAGCTCATTTTCTGCCTAAACC...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTATCGGGAGAACTCCGTaGGATCGTGCAGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIIGRTP*DRAVMA
Trigger: AGCCATCACTGCACGATCTCACGGAGTTCTCCCGAT...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR TCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGATCGGGAGAACTCCGTaGGATCGTGCAGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRIGRTP*DRAVMA
Trigger: AGCCATCACTGCACGATCTCACGGAGTTCTCCCGAT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCTCACTGGCTACGTTaGTTCATTGTGGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAPHWLR*FIVAHG
Trigger: TCCATGAGCCACAATGAATCAACGTAGCCAGTGAGG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGCCCTGTTGCCCTTCTaGTGGGGGCCAGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVALLPF*WGPEEG
Trigger: TCCCTCCTCTGGCCCCCATCAGAAGGGCAACAGGGC...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCAGAGACCATCTGTATTaGCTGTTCTCAAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCRDHLY*LFSKCS
Trigger: TGAACACTTTGAGAACAGTCAATACAGATGGTCTCT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGGACCTGGTGGGAGGTaGTTGGATCCTCGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVGPGGR*LDPRGG
Trigger: ACCGCCCCGAGGATCCAATCACCTCCCACCAGGTCC...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTAGTGGGAGGATCACTTaGCCCAAGAAATTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLSGRIT*PKKFEA
Trigger: AGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCACT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGGATAGCTGGGCACAGTaGCTCACAATTGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALDSWAQ*LTIGIL
Trigger: GAGGATACCAATTGTGAGTCACTGTGCCCAGCTATC...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCAACTCCGTGAGATCGTaGAGTGATGGCTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFANSVRS*SDGSLY
Trigger: GTACAAGGAGCCATCACTGCACGATCTCACGGAGTT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGTGTGGCTCATGGATTTaGCTCCGTTCAGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRCGSWI*LRSARQ
Trigger: CTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACA...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTCATCTTCGCTGTTGCTaGTGCTCTGGGCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLHLRCC*CSGRGT
Trigger: TGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATG...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTTGGTCTCCTTAGCCTaGGTTTGCCCGGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSLVSLA*VCPGFS
Trigger: GGAGAAGCCCGGGCAAACGCAGGCTAAGGAGACCAA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCTCTACAGAAAAGATGTaGAAGAGTCTTAGTATCCCC +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCSTEKM*KSLSIP
Trigger: GGGGATACTAAGACTCTTGCACATCTTTTCTGTAGA...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTCGGACTTGGGAGAGTaGTTAGGGCGGCAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSSDLGE*LGRQVS
Trigger: CGAGACTTGCCGCCCTAAGCACTCTCCCAAGTCCGA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGACTTCTGCTCTTGGTTaGGGTCCCGCTTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRTSALG*GPASRS
Trigger: CGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTACAAACAAAACTCCTaGGAGGGGGAATTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPYKQNS*EGELEP
Trigger: AGGCTCCAATTCCCCCTCCCAGGAGTTTTGTTTGTA...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTTGGGAGGTCCCAAGGTaGGCAAGATGGCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLWEVPR*ARWLEP
Trigger: GGGCTCAAGCCATCTTGCCCACCTTGGGACCTCCCA...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGTGTCCTTGTCTGGAATaGTATGAGAATAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLCPCLE*YENNAG
Trigger: GCCAGCATTATTCTCATACCATTCCAGACAAGGACA...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGAGCTCCCCTCGGTGTaGTTCGGGGCGGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVELPSV*FGAESA
Trigger: AGCGGATTCCGCCCCGAACCACACCGAGGGGAGCTC...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR TCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGAAGTACAGCTTGGTTTaGACTCCTTGGATAGCCACC +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALKYSLV*TPWIAT
Trigger: GGTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTT...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCATTTGCACTCAGGTGTaGAAAGTTCCGAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPICTQV*KVPRCT
Trigger: TGTACACCTCGGAACTTTTCACACCTGAGTGCAAAT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCATACCACCCTCGGCCTaGCTGCTGCTGACGGTATAT +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSIPPSA*LLLTVY
Trigger: ATATACCGTCAGCAGCAGTCAGGCCGAGGGTGGTAT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTGGTTTAGGCAGAAAATaGGCTGCAGGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLGLGRK*AAGLFF
Trigger: GAAGAACAAGCCTGCAGCTCATTTTCTGCCTAAACC...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCGTGAGATCGTGCAGTaGTGGCTCCTTGTACATGGC +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSREIVQ*WLLVHG
Trigger: GCCATGTACAAGGAGCCATCACTGCACGATCTCACG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCATCGGGAGAACTCCGTaGGATCGTGCAGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSIGRTP*DRAVMA
Trigger: AGCCATCACTGCACGATCTCACGGAGTTCTCCCGAT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATCTTCCTGGGCATTTTaGCTCCATCCTATTAACGCA +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSSSWAF*LHPINA
Trigger: TGCGTTAATAGGATGGAGTCAAAATGCCCAGGAAGA...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGAGGATTCCATGGCAATaGGCATGTCCTCTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALRIPWQ*ACPLFG
Trigger: TCCAAAGAGAGGACATGCTCATTGCCATGGAATCCT...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGAGGGTACTAGTGGCCTaGCCTAGCTATACTTTGCTA +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRRVLVA*PSYTLL
Trigger: TAGCAAAGTATAGCTAGGTCAGGCCACTAGTACCCT...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTTCCTGGGTGACAGAGTaGGACCTCAACCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLSWVTE*DLNPRE
Trigger: CTCTCTGGGGTTGAGGTCTCACTCTGTCACCCAGGA...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGACCTGGTCCCACCCCTaGCACATGGGGATTATTACA +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRTWSHP*HMGIIT
Trigger: TGTAATAATCCCCATGTGTCAGGGGTGGGACCAGGT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCAGGCAGAAAATGAGCTaGAGGCTTGTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPRQKMS*RLVLLH
Trigger: GTGAAGAAGAACAAGCCTGCAGCTCATTTTCTGCCT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAAGGCAGAAAATGAGCTaGAGGCTTGTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSRQKMS*RLVLLH
Trigger: GTGAAGAAGAACAAGCCTGCAGCTCATTTTCTGCCT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTGTGGCTCATGGATTTaGCTCCGTTCAGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSCGSWI*LRSARQ
Trigger: CTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACTTCGCTGTTGCTGCTaGTCTGGGCGCGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQLRCCC*SGRGTV
Trigger: GACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAAGTGTAGTAAATGAATaGCTGGCTTTCCTAGCCACG +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSSVVNE*LAFLAT
Trigger: CGTGGCTAGGAAAGCCAGGCATTCATTTACTACACT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTGCTGTCCTCATCTTTaGTGCCATCAATGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPCCPHL*CHQWFH
Trigger: ATGGAACCATTGATGGCACCAAAGATGAGGACAGCA...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATGCTGTCCTCATCTTTaGTGCCATCAATGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSCCPHL*CHQWFH
Trigger: ATGGAACCATTGATGGCACCAAAGATGAGGACAGCA...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCATGGCCACTTTCAGTaGTTTAGGCAGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPHGHFQ*FRQKMS
Trigger: GCTCATTTTCTGCCTAAACCACTGAAAGTGGCCATG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAACTTCTGCTCTTGGTTaGGGTCCCGCTTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQTSALG*GPASRS
Trigger: CGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAAGACACTTCTGCTCTTaGTTGGGGTCCCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQRHFCS*LGSRFQ
Trigger: CTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGATCGCGGGCGAGACTaGCACGCGGATGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEDRGRD*HADAEL
Trigger: CAGTTCAGCATCCGCGTGCCAGTCTCGCCCGCGATC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAAGCCTCAGCATCACCTaGAAACTTGTTAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSSLSIT*KLVRNA
Trigger: GGCATTTCTAACAAGTTTCCAGGTGATGCTGAGGCT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGCAGAGAGTTGAATGGTaGTTACCAGGGTCTAGGGGG +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWQRVEW*LPGSRG
Trigger: CCCCCTAGACCCTGGTAACCACCATTCAACTCTCTG...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGCCCAGCTTTCAACAATaGACAGATCACCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALPSFQQ*TDHPDR
Trigger: TCTGTCTGGGTGATCTGTCCATTGTTGAAAGCTGGG...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCAAAAATGACAGATGCTaGCAAGGTTGCAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCKNDRC*QGCREI
Trigger: TATTTCTCTGCAACCTTGCCAGCATCTGTCATTTTT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGTGCAGCAAACCACCATaGCACGTGCATACCTATGTA +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRCSKPP*HVHTYV
Trigger: TACATAGGTATGCACGTGCCATGGTGGTTTGCTGCA...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGGCAGCTTGACTCTGTaGGAATGGGAGAAGGCACAA +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLGSLTL*EWEKAQ
Trigger: TTGTGCCTTCTCCCATTCCCACAGAGTCAAGCTGCC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGTAGTCCCAGCTACTTaGGAGGCTGAAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSVVPAT*EAEVGG
Trigger: TCCTCCCACTTCAGCCTCCCAAGTAGCTGGGACTAC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGGGAGTTTCTGTTACATaGTGCACGCATTTGTCAATA +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLGVSVT*CTHLSI
Trigger: TATTGACAAATGCGTGCACCATGTAACAGAAACTCC...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCAGCAGACTTCTGTCTaGACATCCAGGCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAQQTSV*TSRHFH
Trigger: ATGGAAATGCCTGGATGTCCAGACAGAAGTCTGCTG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAAAGTCACATCTTATGTaGACGACAGCAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSKSHLM*TTAGKQ
Trigger: CTGTTTGCCTGCTGTCGTCCACATAAGATGTGACTT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR CCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGAGGCCTCACAATCATaGAGGAAGGCAAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSEASQS*RKASRS
Trigger: GCTCCTGCTTGCCTTCCTCCATGATTGTGAGGCCTC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCATTTGCACTCAGGTGTaGAAAGTTCCGAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAICTQV*KVPRCT
Trigger: TGTACACCTCGGAACTTTTCACACCTGAGTGCAAAT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCACGTGAGATCGTGCAGTaGTGGCTCCTTGTACATGGC +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSREIVQ*WLLVHG
Trigger: GCCATGTACAAGGAGCCATCACTGCACGATCTCACG...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR TCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAGGAAGACAGCAGCTCTaGGTTCTTTTGGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQGRQQL*VLLEAH
Trigger: ATGGGCCTCCAAAAGAACTCAGAGCTGCTGTCTTCC...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCTAAGAACAGCAACATaGCTTGTTTATTTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLLRTAT*LVYLVS
Trigger: GGACACTAAATAAACAAGTCATGTTGCTGTTCTTAG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCATGTGCCTTTCATGTaGAGCTCTATGCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAHVPFM*SSMPSL
Trigger: AAGTGAAGGCATAGAGCTTCACATGAAAGGCACATG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGAGGCCAACGAACATATaGAAAAAGTTCAACATCACT +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLRPTNI*KKFNIT
Trigger: AGTGATGTTGAACTTTTTTCATATGTTCGTTGGCCT...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTTCTGAAACAATGGCCTaGGCTGTATGTTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQISETMA*AVCWPL
Trigger: AAGGGGCCAACATACAGCTCAGGCCATTGTTTCAGA...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGAGATCCCAGCTTGCTTaGCAAGGTTCGCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRRSQLA*QGSLRR
Trigger: TCTTCTGAGCGAACCTTGTCAAGCAAGCTGGGATCT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTAGGCAGAAAATGAGCTaGAGGCTTGTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLRQKMS*RLVLLH
Trigger: GTGAAGAAGAACAAGCCTGCAGCTCATTTTCTGCCT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGAACTCCGTGAGATCGTaGAGTGATGGCTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRNSVRS*SDGSLY
Trigger: GTACAAGGAGCCATCACTGCACGATCTCACGGAGTT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTACGCCAGAGACACTTCTaGTCTTGGTTGGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVRQRHF*SWLGSR
Trigger: GCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCG...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR GCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACGCCAGAGACACTTCTaGTCTTGGTTGGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQRQRHF*SWLGSR
Trigger: GCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR GCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGCACAGGACAGAAAACTaGCTGTACATGCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALHRTEN*LYMLCP
Trigger: TGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTG...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTACCGTGCATGTCCAGCTaGTCCGGTCCGAATTTCGCC +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVPCMSS*SGPNFA
Trigger: GGCGAAATTCGGACCGGAGCAGCTGGACATGCACGG...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAATCCTTAGCCTGCGTTTaGCCGGGCTTCTCCGCACTC +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEESLACV*PGFSAL
Trigger: GAGTGCGGAGAAGCCCGGGCAAACGCAGGCTAAGGA...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGCGTGGAAAAGGTCCTTaGTTCCCCTTCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWRGKGP*FPFIFC
Trigger: GCAGAAGATGAAGGGGAAGCAAGGACCTTTTCCACG...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGCAGGCCTCAGTAATGTaGTGTGAAGCGCTGACAGTA +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWQASVM*CEALTV
Trigger: TACTGTCAGCGCTTCACAGCACATTACTGAGGCCTG...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGGAGAATGCTCACTCTTaGCACTTCTATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRENAHS*HFYSTW
Trigger: CCATGTGGAATAGAAGTGGCAAGAGTGAGCATTCTC...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGAGTGTGAACTTGTGTaGATGCAGAAGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLECELV*MQKQAA
Trigger: AGCTGCCTGCTTCTGCATGCACACAAGTTCACACTC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTGTGCTCCCAAAACTTTaGATGTCTCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIVLPKL*MSPSLL
Trigger: GAGGAGAGAGGGAGACATGCAAAGTTTTGGGAGCAC...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGAGTGAGCTGCGATTGTaGCACTGTAATCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWSELRL*HCNPSW
Trigger: CCAGGATGGATTACAGTGGCACAATCGCAGCTCACT...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCATGTGGCTTTGCAGGATaGAGCCACCCTCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSCGFAG*SHPHSS
Trigger: AGAGCTGTGAGGGTGGCTGCATCCTGCAAAGCCACA...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTGCTGTCCTCATCTTTaGTGCCATCAATGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLCCPHL*CHQWFH
Trigger: ATGGAACCATTGATGGCACCAAAGATGAGGACAGCA...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTGCTGTCCTCATCTTTaGTGCCATCAATGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFACCPHL*CHQWFH
Trigger: ATGGAACCATTGATGGCACCAAAGATGAGGACAGCA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGCATGGCCACTTTCAGTaGTTTAGGCAGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRHGHFQ*FRQKMS
Trigger: GCTCATTTTCTGCCTAAACCACTGAAAGTGGCCATG...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAACTTCTGCTCTTGGTTaGGGTCCCGCTTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSTSALG*GPASRS
Trigger: CGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGT...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTACGTTGATTCATTGTaGCTCATGGATTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAYVDSL*LMDLPP
Trigger: CGGAGGCAAATCCATGAGCCACAATGAATCAACGTA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGCTGGAACAAATGTACTaGTTAGGGAGGGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRLEQMY*LGRGGV
Trigger: CACTCCTCCCCTCCCTAACCAGTACATTTGTTCCAG...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCAATGTGCACTTTAGATaGGAAGATGTTGTTAGAACA +
Preference number: 4 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCNVHFR*EDVVRT
Trigger: TGTTCTAACAACATCTTCCCATCTAAAGTGCACATT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCAGCATTCCCACTTCTaGTTATATATCCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLQHSHF*LYIQRK
Trigger: TTTCCTTTGGATATATAACCAGAAGTGGGAATGCTG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAGGTGTTGAGTGCCAGTaGCTTTTCCAGGTGCATGGT +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQGVECQ*LFQVHG
Trigger: ACCATGCACCTGGAAAAGCCACTGGCACTCAACACC...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGCCAAATGGGAGAAGTTaGCCAAAACAAAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRPNGRS*PKQRGY
Trigger: ATAGCCCCTTTGTTTTGGCCAACTTCTCCCATTTGG...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGACTTACAATCATGGTaGAAGGCCCCTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLDLQSW*KAPLHR
Trigger: CCTGTGAAGAGGGGCCTTCCACCATGATTGTAAGTC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGAAGTACAGCTTGGTTTaGACTCCTTGGATAGCCACC +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRKYSLV*TPWIAT
Trigger: GGTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATCCTTTGTACCAATCTaGAGTGCAAGTACAGTAACT +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSSFVPI*SASTVT
Trigger: AGTTACTGTACTTGCACTTCAGATTGGTACAAAGGA...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGCCCTCCATATACAGATaGTCCTTCACTTACGATGGG +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRPSIYR*SFTYDG
Trigger: CCCATCGTAAGTGAAGGATCATCTGTATATGGAGGG...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGTGCCAACAAGCTGAGTaGTTGACTCAAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRCQQAE*LTQKEL
Trigger: CAGCTCCTTTTGAGTCAATCACTCAGCTTGTTGGCA...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGAGGTCAAGGCTGTGGTaGGACATGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: MLGILMHKLNLNNGALVWRSRLW*DMITPL
Trigger: CAGTGGTGTGATCATGTCTCACCACAGCCTTGACCT...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGTGGGGGTACAGGAATTaGGTAAAAATACCCATTCCA +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALWGYRN*VKIPIP
Trigger: TGGAATGGGTATTTTTACTCAATTCCTGTACCCCCA...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGGAAAGAGTTTTAACTaGCTCACAGTTCCGCATGGC +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLGKSFN*LTVPHG
Trigger: GCCATGCGGAACTGTGAGTCAGTTAAAACTCTTTCC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGCCCAGTGGACCCACTTaGGTGTACATCATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWPSGPT*VYIMAG
Trigger: TCCTGCCATGATGTACACTCAAGTGGGTCCACTGGG...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTACTAGCTTTTATGGGTaGAAAAGGATGACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLTSFYG*KRMTGR
Trigger: TCTCCCTGTCATCCTTTTTCACCCATAAAAGCTAGT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCAGCAGAAGATTTCGTaGCACTTAGCACGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSQQKIS*HLARKG
Trigger: CCCCTTTCGTGCTAAGTGTCACGAAATCTTCTGCTG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000441825.8
CDS-3UTR GCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAAACTCCGTGAGATCGTaGAGTGATGGCTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQNSVRS*SDGSLY
Trigger: GTACAAGGAGCCATCACTGCACGATCTCACGGAGTT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGTGTGGCTCATGGATTTaGCTCCGTTCAGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWCGSWI*LRSARQ
Trigger: CTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACA...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAACACCACCGCTTCTTTTaGTGCCCCTCTCTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEHHRFF*CPSLGS
Trigger: CGAACCCAGAGAGGGGCAGCAAAAGAAGCGGTGGTG...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGTTCATTGCCAGACAATaGAGCTTTGGGGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWFIARQ*SFGELE
Trigger: CTCTAGCTCCCCAAAGCTGCATTGTCTGGCAATGAA...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGTTCCCCTTCATCTTCTaGCATGATGGTAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALFPFIF*HDGKFP
Trigger: AGGAAACTTACCATCATGGCAGAAGATGAAGGGGAA...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGAAGAAGAGAAATAAGTaGAACAGTATCCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLKKRNK*NSILCS
Trigger: TGAACACAGGATACTGTTGCACTTATTTCTCTTCTT...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAATCCTCTACCTTGGCTTaGTCCCTGCACACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQSSTLA*SLHTAQ
Trigger: TTGGGCCGTGTGCAGGGAGCAAGCCAAGGTAGAGGA...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGTTCAAAACACAATCATaGCCTTCCAATAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALFKTQS*PSNSPP
Trigger: TGGGGGACTATTGGAAGGGCATGATTGTGTTTTGAA...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCACTTTGGTGCCATCAATaGTTCCATCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSLWCHQ*FHPPAA
Trigger: AGCTGCAGGCGGATGGAACCATTGATGGCACCAAAG...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CCA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGAATGGGGCTTTAGTATaGATGATAAGAAGGTCTAAT +
Preference number: 4 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLNGALV*MIRRSN
Trigger: ATTAGACCTTCTTATCATCCATACTAAAGCCCCATT...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGAACCGCATCAAAAAGTaGGCAAAGGACATGAACAGA +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALNRIKK*AKDMNR
Trigger: TCTGTTCATGTCCTTTGCCCACTTTTTGATGCGGTT...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCCAGTCAGGCTAACTaGTATAACTGTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAPSQAN*YNCFSS
Trigger: AGAAGAGAAACAGTTATACCAGTTAGCCTGACTGGG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGCAGCTCTTCCCCTGTaGCTTTGCAGGATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVAALPL*LCRMQP
Trigger: TGGCTGCATCCTGCAAAGCCACAGGGGAAGAGCTGC...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp GGAGAGATACTATTAGGAAAAATAGCTAATGCATGCTaGGCTGAACACCTCAGTGATGGGTTGAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GEILLGKIANAC*AEHLSDGLKVQ
Trigger: CTGCACCTTCAACCCATCACTGAGGTGTTCAGCCAAGCATGCATTAGCTATTTTTCCTAATAGTATCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAATACCACCCTCGGCCTaGCTGCTGCTGACGGTATAT +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEIPPSA*LLLTVY
Trigger: ATATACCGTCAGCAGCAGTCAGGCCGAGGGTGGTAT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACGTGAGATCGTGCAGTaGTGGCTCCTTGTACATGGC +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQREIVQ*WLLVHG
Trigger: GCCATGTACAAGGAGCCATCACTGCACGATCTCACG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTGGAGCCGAAGAGTTTaGCCCGGGAAAAGACATTTA +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSWSRRV*PGKRHL
Trigger: TAAATGTCTTTTCCCGGGTCAAACTCTTCGGCTCCA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAGTGAGAAAATGGCTTTaGATAGAGGTTGAAAGGATT +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSVRKWL*IEVERI
Trigger: AATCCTTTCAACCTCTATTCAAAGCCATTTTCTCAC...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGGCTGTGGTGAGACATaGTCACACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEGCGET*SHHCTP
Trigger: TGGAGTGCAGTGGTGTGATCATGTCTCACCACAGCC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAAGCCATAAAAAGGAATaGGATCATGTCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSSHKKE*DHVIFR
Trigger: CCTGAAAATGACATGATCTCATTCCTTTTTATGGCT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGTGGAAGACAGTGTGGTaGTTTCTCCGAGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWWKTVW*FLRDLE
Trigger: TTCTAGATCTCGGAGAAATCACCACACTGTCTTCCA...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAACAGAAGCAGGCAGCTTaGCTCTGTGGGAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEQKQAA*LCGNGR
Trigger: TCTCCCATTCCCACAGAGTCAAGCTGCCTGCTTCTG...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAATCATCATGTCTGAGTaGCTGAGAGGCTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSIIMSE*LRGCEQ
Trigger: CTGCTCACAGCCTCTCAGTCACTCAGACATGATGAT...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGTTTCCATACATCCTCTaGAATCTAGGCAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRFPYIL*NLGRGS
Trigger: GGAACCTCTGCCTAGATTTCAGAGGATGTATGGAAA...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCATGTTGTTCAACAGGTaGATAGTTAAACTATGGCAC +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPMLFNR*IVKLWH
Trigger: GTGCCATAGTTTAACTATTCACCTGTTGAACAACAT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCACAGCAGAAGATTTCGTaGCACTTAGCACGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSQQKIS*HLARKG
Trigger: CCCCTTTCGTGCTAAGTGTCACGAAATCTTCTGCTG...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR GCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGTCCCTCACTGTTCATTaGCAAGTACAGCTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWSLTVH*QVQLGL
Trigger: CAAACCAAGCTGTACTTGGCAATGAACAGTGAGGGA...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGTCCCTCACTGTTCATTaGCAAGTACAGCTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRSLTVH*QVQLGL
Trigger: CAAACCAAGCTGTACTTGGCAATGAACAGTGAGGGA...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGAGGCAGAAAATGAGCTaGAGGCTTGTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRRQKMS*RLVLLH
Trigger: GTGAAGAAGAACAAGCCTGCAGCTCATTTTCTGCCT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR GCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAAACTCCGTGAGATCGTaGAGTGATGGCTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSNSVRS*SDGSLY
Trigger: GTACAAGGAGCCATCACTGCACGATCTCACGGAGTT...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTATGTGGCTCATGGATTTaGCTCCGTTCAGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVCGSWI*LRSARQ
Trigger: CTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACA...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACCCAACTTTCTTCCATaGAACAGATATGAAGATCTA +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSPNFLP*NRYEDL
Trigger: TAGATCTTCATATCTGTTGCATGGAAGAAAGTTGGG...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATATCATGCAACTCTATaGCAAGAACCCAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSYHATL*QEPNFL
Trigger: AAGAAAGTTGGGTTCTTGGCATAGAGTTGCATGATA...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTAAAACTGCCTGTACATaGTATGTCCACTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLKTACT*YVHFWN
Trigger: GTTCCAAAAGTGGACATAGCATGTACAGGCAGTTTT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACCCAGTAATTTTATTTaGAGATGCTCTGAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSPSNFI*RCSEKH
Trigger: GTGCTTTTCAGAGCATCTGCAAATAAAATTACTGGG...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTCAGTGCTATTTCATGTaGCTTTCATGTGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLQCYFM*LSCEAL
Trigger: TAGAGCTTCACATGAAAGGCACATGAAATAGCACTG...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTATTCCCAGACATCACTTaGATACCAGGGGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVFPDIT*IPGALP
Trigger: GGGCAGAGCCCCTGGTATGCAAGTGATGTCTGGGAA...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTAAGCTGACACATGGGTaGTCCCAAAACTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIKLTHG*SQNFAC
Trigger: ACATGCAAAGTTTTGGGAGCACCCATGTGTCAGCTT...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGTGCCAGCAGGGGAAATaGCAGATGCTTATAAAACCA +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRCQQGK*QMLIKP
Trigger: TGGTTTTATAAGCATCTGGCATTTCCCCTGCTGGCA...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTATAATCGGGAAAAGTTaGCCCGTGCCAGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLIIGKS*PVPGFR
Trigger: TCGGAAACCTGGCACGGGCCAACTTTTCCCGATTAT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAACAATGCTAAGAAACTaGAAATCAGTAAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSTMLRN*KSVKGG
Trigger: TCCTCCCTTTACTGATTTCCAGTTTCTTAGCATTGT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGAAAAGAGCAAAGATGTaGAATCAACCCAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRKRAKM*NQPKCP
Trigger: TGGGCATTTGGGTTGATTCCACATCTTTGCTCTTTT...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCATGCATTTTAGATATTaGGGTGATGTCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPMHFRY*GDVSKM
Trigger: CATCTTGCTGACATCACCCCAATATCTAAAATGCAT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGCCCACCCCTGACACATaGGGATTATTACAATTCAAG +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWPTPDT*GLLQFK
Trigger: CTTGAATTGTAATAATCCCCATGTGTCAGGGGTGGG...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATCCAGAAAGTTCCACGTaGCTGGGGAGGCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDPESST*LGRPHN
Trigger: ATTGTGAGGCCTCCCCAGCCACGTGGAACTTTCTGG...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR TCA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGAAGTACAGCTTGGTTTaGACTCCTTGGATAGCCACC +
Preference number: 4 (lower is better)
Translates to: MLGILMHKLNLNNGALVWKYSLV*TPWIAT
Trigger: GGTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTT...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCATTTGCACTCAGGTGTaGAAAGTTCCGAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSICTQV*KVPRCT
Trigger: TGTACACCTCGGAACTTTTCACACCTGAGTGCAAAT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR TCA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGGGTTTAGGCAGAAAATaGGCTGCAGGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: MLGILMHKLNLNNGALVWGLGRK*AAGLFF
Trigger: GAAGAACAAGCCTGCAGCTCATTTTCTGCCTAAACC...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTACAGCACAATAACTTaGCCAGAATACCACAAATCT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAYSTIT*PEYHKS
Trigger: AGATTTGTGGTATTCTGGTCAAGTTATTGTGCTGTA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCGACCTACACTATTTCTaGACAACAGAAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFADLHYF*TTEKAR
Trigger: TCTTGCTTTTTCTGTTGTTCAGAAATAGTGTAGGTC...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCATTGGTGGTGTATTTTaGAACGTTCTTAAGACCCAT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAIGGVF*NVLKTH
Trigger: ATGGGTCTTAAGAACGTTTCAAAATACACCACCAAT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTATGGAAACAGAGAGTTaGATGGTGGTTACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLMETES*MVVTRV
Trigger: GACCCTGGTAACCACCATTCAACTCTCTGTTTCCAT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATTCATGTCTGAGTGACTaGGAGGCTGTGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDSCLSD*EAVSRE
Trigger: TTCCCTGCTCACAGCCTCTCAGTCACTCAGACATGA...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTCCAAACCTCAATTCTTaGCTTCTGTGCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLPNLNS*LLCSCK
Trigger: CTTGCAGGAGCACAGAAGTCAAGAATTGAGGTTTGG...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAACTATACCCTTAAGCTaGGGCTCTTCCGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQTIPLS*GSSGSV
Trigger: CACAGAGCCGGAAGAGCCTCAGCTTAAGGGTATAGT...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR GCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTATCATGCAACTCTATaGCAAGAACCCAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLYHATL*QEPNFL
Trigger: AAGAAAGTTGGGTTCTTGGCATAGAGTTGCATGATA...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCACAGGACAGAAAACTaGCTGTACATGCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSHRTEN*LYMLCP
Trigger: TGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTATCCCATTCTCTCTCCTaGTGCCACGTGGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVSHSLS*CHVEKV
Trigger: GACCTTTTCCACGTGGCAGCAGGAGAGAGAATGGGA...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTTTGTTGTGGATTTTTaGATCTATGTTCAACAGGGA +
Preference number: 4 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPFVVDF*IYVQQG
Trigger: TCCCTGTTGAACATAGATGCAAAAATCCACAACAAA...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAACTAGTGGCTTGGGATaGCTGAACTGTAAACCCCCG +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEETSGLG*LNCKPP
Trigger: CGGGGGTTTACAGTTCAGGCATCCCAAGCCACTAGT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAATTTCCCTTCTGCACTaGCCTAGCAGAGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVISLLH*PSRGSP
Trigger: GGGAGAACCTCTGCTAGGGCAGTGCAGAAGGGAAAT...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGTGCTTCTTTATAAGCTaGTCCTACCCAGACAATTGC +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRCFFIS*SYPDNC
Trigger: GCAATTGTCTGGGTAGGACCAGCTTATAAAGAAGCA...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS-3UTR CCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTACTTTGGTGCCATCAATaGTTCCATCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVLWCHQ*FHPPAA
Trigger: AGCTGCAGGCGGATGGAACCATTGATGGCACCAAAG...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCATGGCCACTTTCAGTaGTTTAGGCAGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSHGHFQ*FRQKMS
Trigger: GCTCATTTTCTGCCTAAACCACTGAAAGTGGCCATG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATACGTTGATTCATTGTaGCTCATGGATTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQYVDSL*LMDLPP
Trigger: CGGAGGCAAATCCATGAGCCACAATGAATCAACGTA...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTACGTTGATTCATTGTaGCTCATGGATTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSYVDSL*LMDLPP
Trigger: CGGAGGCAAATCCATGAGCCACAATGAATCAACGTA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAATGTTTTTGTCGCAGCTaGTCTTGCCTTTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEECFCRS*SCLCWG
Trigger: GCCCCAGCAAAGGCAAGACCAGCTGCGACAAAAACA...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGCTTAAGCTGAGGCTCTaGTCTTCTTCTGCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWLKLRL*SSSAPL
Trigger: AAGAGGCGCAGAAGAAGACCAGAGCCTCAGCTTAAG...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTTGCTACTTCAGTTACTaGCACATAATGGACGCTCAA +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQICYFSY*HIMDAQ
Trigger: TTGAGCGTCCATTATGTGCCAGTAACTGAAGTAGCA...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAAGCCAGAGAGCCACATaGATTTTGAACTTGACTGCT +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQSQRAT*ILNLTA
Trigger: AGCAGTCAAGTTCAAAATCCATGTGGCTCTCTGGCT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGATTCTTAAAACCTTATaGAACCACCTAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRILKTL*NHLSPQ
Trigger: TTGGGGACTTAGGTGGTTCCATAAGGTTTTAAGAAT...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTCCTCAAATGTTGGGTaGAATTCACCAATGTTGATA +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFASSNVG*NSPMLI
Trigger: TATCAACATTGGTGAATTCCACCCAACATTTGAGGA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGAGTTGTAAAGATTTTTaGGGACTTATGTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALSCKDF*GLMWCH
Trigger: ATGGCACCACATAAGTCCCCAAAAATCTTTACAACT...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGTGCAGCAAACCACCATaGCACATGTTTACCTATGTA +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRCSKPP*HMFTYV
Trigger: TACATAGGTAAACATGTGCCATGGTGGTTTGCTGCA...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGAAGGAGAGATTTGGGTaGGAACACAAAACCAAACCA +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLKERFG*EHKTKP
Trigger: TGGTTTGGTTTTGTGTTCCCACCCAAATCTCTCCTT...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTTAATTCCGCAGATTaGATGGAATCTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLFNSAD*MESCRN
Trigger: GTTACGACAAGATTCCATCCAATCTGCGGAATTAAA...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000441825.8
CDS-3UTR CCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAAAAGTTCCACGTGGCTaGGGAGGCCTCACAATCATG +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQKVPRG*GGLTIM
Trigger: CATGATTGTGAGGCCTCCCCAGCCACGTGGAACTTT...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441825.8
3UTR CAA 72 bp GTGTGTTCTAGAAAGACTTCCTGCATTGTGACAGAATaGCAACTGTTACAAACTTCTTCCAGTATGCCCACA +
Preference number: 4 (lower is better)
Translates to: VCSRKTSCIVTE*QLLQTSSSMPT
Trigger: TGTGGGCATACTGGAAGAAGTTTGTAACAGTTGCAATTCTGTCACAATGCAGGAAGTCTTTCTAGAACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp AAGATCATGCAAATTCCGCTTTTAGTACAGTTAGCCTaGCAGGTGACTCCAAGGAACTTTGAAGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KIMQIPLLVQLA*QVTPRNFEALF
Trigger: AAAGAGAGCTTCAAAGTTCCTTGGAGTCACCTGCAAGGCTAACTGTACTAAAAGCGGAATTTGCATGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACCTCACTGGCTACGTTaGTTCATTGTGGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQPHWLR*FIVAHG
Trigger: TCCATGAGCCACAATGAATCAACGTAGCCAGTGAGG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR TCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTTCCCCAAAGTATAGGTaGGATCATGAGAAAATTTGG +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQISPKYR*DHEKIW
Trigger: CCAAATTTTCTCATGATCTCACCTATACTTTGGGGA...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR TCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTAACCCTGAATTTGGTTaGTTTGGATTAAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQINPEFG*FGLSDA
Trigger: TGCGTCACTTAATCCAAATCAACCAAATTCAGGGTT...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR TCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGACTATACCCTTAAGCTaGGGCTCTGGTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWTIPLS*GSGLLL
Trigger: CAGAAGAAGACCAGAGCCTCAGCTTAAGGGTATAGT...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAAACAGAGAGGGGAAATaGCACTGTGAGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVNREGK*HCEWQR
Trigger: TCTCTGCCACTCACAGTGTCATTTCCCCTCTCTGTT...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTACAGATTTTTGTACTaGCAATCACAGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSYRFLY*QSQPCC
Trigger: ACAGCAGGGCTGTGATTGTCAGTACAAAAATCTGTA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTGCATTCTCAATCGTGTaGAACCATGAGACCACATCT +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLAFSIV*NHETTS
Trigger: AGATGTGGTCTCATGGTTTCACACGATTGAGAATGC...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGTGCCCACGGACAGATaGATGAAGAAAGAAAATTAT +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLVPTDR*MKKENY
Trigger: ATAATTTTCTTTCTTCATTCATCTGTCCGTGGGCAC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTGCTGGCTTCATAAAATaGGTTTGGAAGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLAGFIK*VWKCSF
Trigger: GAAGGAGCACTTCCAAACTCATTTTATGAAGCCAGC...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCATCCCTCACTGTTCATTaGCAAGTACAGCTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSSLTVH*QVQLGL
Trigger: CAAACCAAGCTGTACTTGGCAATGAACAGTGAGGGA...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR GCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGATGTTTACTTCCAGTTaGTACTTCAGTTACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLMFTSS*YFSYWH
Trigger: GTGCCAGTAACTGAAGTAGCAACTGGAAGTAAACAT...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGCACATAGTGCTAATTTaGTTACTACCAGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLHIVLI*LLPADL
Trigger: TAGGTCTGCTGGTAGTAAGCAAATTAGCACTATGTG...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAAGGCCTCCCCAGCCATaGAGAACTGTGAGTCAATTA +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEERPPQP*RTVSQL
Trigger: TAATTGACTCACAGTTCTGCATGGCTGGGGAGGCCT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGGATTTTGAACTTGACTaGTCCATTCTCCCAACTGAA +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRDFELD*SILPTE
Trigger: TTCAGTTGGGAGAATGGAGCAGTCAAGTTCAAAATC...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGTGGGGACTTATGTGGTaGCATATGAATTTTAGAATT +
Preference number: 4 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALWGLMW*HMNFRI
Trigger: AATTCTAAAATTCATATGGCACCACATAAGTCCCCA...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACAAGAAATTCGAGGCTaGAGTGAGCTGCGATTGTGC +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQQEIRG*SELRLC
Trigger: GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTATCTTTGTGGTGTACTTaGTTCAGCGGGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVSLWCT*FSGQQK
Trigger: CTTCTGCTGCCCGCTGAAGCAAGTACACCACAAAGA...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR CCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCATACGTTGATTCATTGTaGCTCATGGATTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSYVDSL*LMDLPP
Trigger: CGGAGGCAAATCCATGAGCCACAATGAATCAACGTA...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CCA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGCGTTCACAGATGGGGTaGAAAACTGACATTAAGTGC +
Preference number: 4 (lower is better)
Translates to: MLGILMHKLNLNNGALVWRSQMG*KTDIKC
Trigger: GCACTTAATGTCAGTTTTCCACCCCATCTGTGAACG...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGATACAAAAACTGAGGTaGGAGGATCACCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: MLGILMHKLNLNNGALVWIQKLR*EDHLIL
Trigger: CAGGATCAGGTGATCCTCCCACCTCAGTTTTTGTAT...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTAAAACAGTATGGTATTaGCATAGAAGCAGACACATA +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLKTVWY*HRSRHI
Trigger: TATGTGTCTGCTTCTATGCCAATACCATACTGTTTT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTTTTTCCTCAAATGTTaGGTGGAATTCACCAATGTT +
Preference number: 4 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAFFLKC*VEFTNV
Trigger: AACATTGGTGAATTCCACCCAACATTTGAGGAAAAA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTCTTTTACACTGCTGGTaGGAAAGTAAATTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLLLHCW*ESKLVQ
Trigger: TTGAACTAATTTACTTTCCCACCAGCAGTGTAAAAG...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTCTTGCAACCGTAAGTTaGAGATTGTATCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLLATVS*RLYQIC
Trigger: ACAAATTTGATACAATCTCCAACTTACGGTTGCAAG...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAATCACAGCTCTTTTCATaGGCTGGTGTTGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQSQLFS*AGVECQ
Trigger: CTGGCACTCAACACCAGCCCATGAAAAGAGCTGTGA...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTATATACACAACAGTTTaGATGCATCTCAAGGGAATT +
Preference number: 4 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLIYTTV*MHLKGI
Trigger: AATTCCCTTGAGATGCATCCAAACTGTTGTGTATAT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAAAGTACAGCTTGGTTTaGACTCCTTGGATAGCCACC +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQKYSLV*TPWIAT
Trigger: GGTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTT...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR TCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGATTTGCACTCAGGTGTaGAAAGTTCCGAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWICTQV*KVPRCT
Trigger: TGTACACCTCGGAACTTTTCACACCTGAGTGCAAAT...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATGGTTTAGGCAGAAAATaGGCTGCAGGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDGLGRK*AAGLFF
Trigger: GAAGAACAAGCCTGCAGCTCATTTTCTGCCTAAACC...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR TCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAAACCCTGAATTTGGTTaGTTTGGATTAAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQNPEFG*FGLSDA
Trigger: TGCGTCACTTAATCCAAATCAACCAAATTCAGGGTT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR TCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAGTGTGTGTGTGTGTGTaGAGTGTTTGTACAAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSVCVCV*SVCTKE
Trigger: CTCTTTTGTACAAACACTTCACACACACACACACAC...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGCCCAACTTTCTTCCATaGAACAGATATGAAGATCTA +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRPNFLP*NRYEDL
Trigger: TAGATCTTCATATCTGTTGCATGGAAGAAAGTTGGG...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCAAAACTGCCTGTACATaGTATGTCCACTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSKTACT*YVHFWN
Trigger: GTTCCAAAAGTGGACATAGCATGTACAGGCAGTTTT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGTCTAGAAAGACTTCCTaGATTGTGACAGAATTGCAA +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWSRKTS*IVTELQ
Trigger: TTGCAATTCTGTCACAATGCAGGAAGTCTTTCTAGA...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGTTATCTTTGTGTGAATaGTTTATCCAGGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWLSLCE*FIQASV
Trigger: TACTGAGGCCTGGATAAAGCATTCACACAAAGATAA...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGTTTAGAGATACCCAGTaGTATTTCATGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLFRDTQ*YFMCLS
Trigger: TGAAAGGCACATGAAATAGCACTGGGTATCTCTAAA...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAACACCATGTGTAAGCTaGCAAAGCTTGGGGATTGCA +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQTPCVS*QSLGIA
Trigger: TGCAATCCCCAAGCTTTGGCAGCTTACACATGGTGT...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGGATCATGAGAAAATTTaGCAGTCCTTCTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRDHEKI*QSFSQI
Trigger: AATCTGAGAGAAGGACTGCCAAATTTTCTCATGATC...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTACAATAGATAAGTTATaGAACAACCTAAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQITIDKL*NNLSAH
Trigger: GTGGGCACTTAGGTTGTTCCATAACTTATCTATTGT...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGCCATCAATGATACAGTaGATAAAGAAAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLPSMIQ*IKKMWH
Trigger: GTGCCACATTTTCTTTATCCACTGTATCATTGATGG...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCATTGACTCTGTGGGAATaGGAGAAGGCACAAAAACTT +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSLTLWE*EKAQKL
Trigger: AAGTTTTTGTGCCTTCTCCCATTCCCACAGAGTCAA...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTGTGATGTCAGCAAGATaGCAGAACAGGAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLVMSAR*QNRNFL
Trigger: GAGAAAATTCCTGTTCTGCCATCTTGCTGACATCAC...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCAATACCCATTCCAAATaGGAGAAGTTGGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSNTHSK*EKLAKT
Trigger: TGTTTTGGCCAACTTCTCCCATTTGGAATGGGTATT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTaGAGCCTGAGAAGCCAATTCAGATTCAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVT*SLRSQFRFNPE
Trigger: TTCAGGGTTGAATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR TCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAATGTGCCAAATACAATaGCAGGAAGACTCATACATA +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQMCQIQ*QEDSYI
Trigger: TATGTATGAGTCTTCCTGTCATTGTATTTGGCACAT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR TCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCTCATTTGTATAATTTaGCTACTGAACGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSLICII*LLNGNV
Trigger: CACATTCCCGTTCAGTAGTCAAATTATACAAATGAG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGGGGAAATGACACTGTaGGTGGCAGAGAAAATACTA +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVGEMTL*VAEKIL
Trigger: TAGTATTTTCTCTGCCACTCACAGTGTCATTTCCCC...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATGATAGGAGCTCATGCTaGATCTGGTCCAAACATCTT +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDDRSSC*IWSKHL
Trigger: AAGATGTTTGGACCAGATTCAGCATGAGCTCCTATC...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAAATCGTGTGAAACCATaGGACCACATCTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQNRVKP*DHIFVD
Trigger: GTCCACAAAGATGTGGTCTCATGGTTTCACACGATT...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAACTGTGCCAACAAGCTaGGTGATTGACTCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEETVPTS*VIDSKG
Trigger: TCCTTTTGAGTCAATCACTCAGCTTGTTGGCACAGT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGCCATTTATCTTTGTGTaGATGCTTTATCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWPFIFV*MLYPGL
Trigger: GAGGCCTGGATAAAGCATTCACACAAAGATAAATGG...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTCTGTTTTGTTTTATGTaGCACAGAGCGTCTACACTT +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLLFCFM*HRASTL
Trigger: AAGTGTAGACGCTCTGTGTCACATAAAACAAAACAG...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGACCAGAAATAACATTTaGCCCAGCAATCCCATTACT +
Preference number: 4 (lower is better)
Translates to: MLGILMHKLNLNNGALVWTRNNI*PSNPIT
Trigger: AGTAATGGGATTGCTGGGTCAAATGTTATTTCTGGT...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGCTTGGGTTGCTACATaGGAACACAGACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEAWVAT*EHRQRS
Trigger: ACTTCTTTGTCTGTGTTCTCATGTAGCAACCCAAGC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGGATTTCTCCATTGGGTaGAAGGGAGAGTGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWDFSIG*KGECSK
Trigger: TTTACTACACTCTCCCTTTCACCCAATGGAGAAATC...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGGGAATTGTGCTGAGTaGCAAAAGCCAATCTCTATG +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEGNCAE*QKPISM
Trigger: CATAGAGATTGGCTTTTGTCACTCAGCACAATTCCC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATTCCTACCCAGACAATTaGTGTCTACATTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDSYPDN*CLHLEQ
Trigger: CTGCTCCAAATGTAGACAGCAATTGTCTGGGTAGGA...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS-3UTR GCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTAAAGAGTTTATTCGGTaGGTATTTGGGTATACAACA +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIKEFIR*VFGYTT
Trigger: TGTTGTATACCCAAATACGCACCGAATAAACTCTTT...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCATCTATTATACCACTaGCATATCCCTGTACAGATT +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSHLLYH*HIPVQI
Trigger: AATCTGTACAGGGATATGGCAGTGGTATAATAGATG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTATGCTGTCCTCATCTTTaGTGCCATCAATGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVCCPHL*CHQWFH
Trigger: ATGGAACCATTGATGGCACCAAAGATGAGGACAGCA...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACATGGCCACTTTCAGTaGTTTAGGCAGAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQHGHFQ*FRQKMS
Trigger: GCTCATTTTCTGCCTAAACCACTGAAAGTGGCCATG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CCA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTAATGGGGCTTTAGTATaGATGATAAGAAGGTCTAAT +
Preference number: 4 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQINGALV*MIRRSN
Trigger: ATTAGACCTTCTTATCATCCATACTAAAGCCCCATT...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCATTCGGTGAGCTTGACTaGCTTAAAACTGGAACAAAT +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSFGELD*LKTGTN
Trigger: ATTTGTTCCAGTTTTAAGCCAGTCAAGCTCACCGAA...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAAGACTTCCTGCATTGTaGCAGAATTGCAACTGTTAC +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEERLPAL*QNCNCY
Trigger: GTAACAGTTGCAATTCTGTCACAATGCAGGAAGTCT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACTTCTGAAATCAGGATaGAGAAGAGAATGCTCACTC +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQLLKSG*RRECSL
Trigger: GAGTGAGCATTCTCTTCTTCATCCTGATTTCAGAAG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAAGATGCTGGCAAGGTTaGAGAGAAATAGGAACACTT +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQRCWQG*REIGTL
Trigger: AAGTGTTCCTATTTCTCTGCAACCTTGCCAGCATCT...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCTCTACTTCCTGATATaGATGATAAAGGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSLYFLI*MIKGLK
Trigger: CTTTAAACCCTTTATCATGCATATCAGGAAGTAGAG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTACAAACAGAGAGCTTGTaGAGAGAAACTCCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVQTESL*RETPLE
Trigger: TTCTAAGGGAGTTTCTCTGCACAAGCTCTCTGTTTG...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR CCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAATTGCTGTCTACATTTaGAGCAGACACAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQIAVYI*SRHRER
Trigger: TCTCTCTCTGTGTCTGCTCCAAATGTAGACAGCAAT...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS-3UTR CCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATGTTGTAGGGCAAACCTaGGCAATACTATTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDVVGQT*AILFSV
Trigger: CACACTAAATAGTATTGCCCAGGTTTGCCCTACAAC...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATTCTACACTTCCCTTCTaGCTGTTGAATTCCTACTCA +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDSTLPF*LLNSYS
Trigger: TGAGTAGGAATTCAACAGCCAGAAGGGAAGTGTAGA...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGTAATCAAAACAGTATaGTATTGGCATAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSVIKTV*YWHRSR
Trigger: TCTGCTTCTATGCCAATACCATACTGTTTTGATTAC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAAGTGAGAGTTATCCCTaGGATAAAAGGATGGCTCAA +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEESESYP*DKRMAQ
Trigger: TTGAGCCATCCTTTTATCCCAGGGATAACTCTCACT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAACATACCAAAATATATaGGATGCAGCAAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQTYQNI*DAAKGI
Trigger: AATGCCTTTTGCTGCATCCCATATATTTTGGTATGT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGTCCAGCTCACAGATaGAGCAAAACAATTACGAGA +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDSPAHR*SKTITR
Trigger: TCTCGTAATTGTTTTGCTCCATCTGTGAGCTGGACT...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTTCATAATGAAATGTTaGGGGAAATACTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSFIMKC*GKYLEV
Trigger: CACTTCCAAGTATTTCCCCCAACATTTCATTATGAA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCATTTAATTCCGCAGATTaGATGGAATCTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSFNSAD*MESCRN
Trigger: GTTACGACAAGATTCCATCCAATCTGCGGAATTAAA...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441825.8
3UTR CAA 72 bp GAGAAAATACTAGCACAAACGCCTCATTTGTATAATTaGACTACTGAACGGGAATGTGAATTCCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: EKILAQTPHLYN*TTERECEFLCT
Trigger: GGTACAAAGGAATTCACATTCCCGTTCAGTAGTCAAATTATACAAATGAGGCGTTTGTGCTAGTATTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp GTTAGTTATTTCCAAGATACAATGGGGGTACAGGAATaGAGTAAAAATACCCATTCCAAATGGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VSYFQDTMGVQE*SKNTHSKWEKL
Trigger: CAACTTCTCCCATTTGGAATGGGTATTTTTACTCAATTCCTGTACCCCCATTGTATCTTGGAAATAACTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATTCCCCAAAGTATAGGTaGGATCATGAGAAAATTTGG +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDSPKYR*DHEKIW
Trigger: CCAAATTTTCTCATGATCTCACCTATACTTTGGGGA...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR TCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACTACTTCTTCAAATGTaGACATGGCAACACGAGATT +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQLLLQM*TWQHEI
Trigger: AATCTCGTGTTGCCATGTTCACATTTGAAGAAGTAG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTATCCTTAACAAAGCCATaGTTCTTTATAAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVSLTKP*FFISWS
Trigger: GGACCAGCTTATAAAGAAGCATGGCTTTGTTAAGGA...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS-3UTR GCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTAAAGAGTTTATTCGGTaGGTATTTGGGTATACAACA +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLKEFIR*VFGYTT
Trigger: TGTTGTATACCCAAATACGCACCGAATAAACTCTTT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTATTGTACTGGTCAAACTaGCCCTATAACTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVLYWSN*PYNLRN
Trigger: ATTCCTCAAGTTATAGGGGCAGTTTGACCAGTACAA...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAGAAATTAAATCAGTATaGCAAACAGACATCTGCACT +
Preference number: 4 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSEIKSV*QTDICT
Trigger: AGTGCAGATGTCTGTTTGGCATACTGATTTAATTTC...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTAATGGGGCTTTAGTATaGATGATAAGAAGGTCTAAT +
Preference number: 4 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLNGALV*MIRRSN
Trigger: ATTAGACCTTCTTATCATCCATACTAAAGCCCCATT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGCATGTCCTCTCTTTaGATACAAACAAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDSMSSL*IQTKLL
Trigger: CAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCT...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGATGCAACCTACAGAGTaGGAGAAAATTTTTGCAATC +
Preference number: 4 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWMQPTE*EKIFAI
Trigger: GATTGCAAAAATTTTCTCCCACTCTGTAGGTTGCAT...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATATGTGCCAAATACAATaGCAGGAAGACTCATACATA +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDMCQIQ*QEDSYI
Trigger: TATGTATGAGTCTTCCTGTCATTGTATTTGGCACAT...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR TCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAATTCTTCCAATCTATaGACAAAGGGATCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDNSSNL*TKGSVP
Trigger: TGGAACAGATCCCTTTGTTCATAGATTGGAAGAATT...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACAAGAGATACAACTTTaGCTCATGATTTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQQEIQL*LMISPL
Trigger: CAATGGAGAAATCATGAGTCAAAGTTGTATCTCTTG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR TCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATCACTATCTACAATTTTaGCAACCACTCAAGTATGAG +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDHYLQF*QPLKYE
Trigger: CTCATACTTGAGTGGTTGTCAAAATTGTAGATAGTG...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAATGAGTTCTACTAAATaGCTATTGCTTCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEMSSTK*LLLLYH
Trigger: GTGGTACAGAAGCAATAGGCATTTAGTAGAACTCAT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAATCTAAGTGTGATGCTTaGATGTCTATCTACCACTTT +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQSKCDA*MSIYHF
Trigger: AAAGTGGTAGATAGACATGCAAGCATCACACTTAGA...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACCCATTCATTCCCATTaGACCATTATTCACAATAGA +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQPIHSH*TIIHNR
Trigger: TCTATTGTGAATAATGGTGCAATGGGAATGAATGGG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATCTGTTTCAAATCACATaGTCTTCAATACAGAAACCC +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDLFQIT*SSIQKP
Trigger: GGGTTTCTGTATTGAAGAGCATGTGATTTGAAACAG...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGGAACACTTTTACACTaGTGGTGGGAAAGTAAATTA +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEGTLLH*WWESKL
Trigger: TAATTTACTTTCCCACCAGCAGTGTAAAAGTGTTCC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATGATCATGAGAAAATTTaGCAGTCCTTCTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDDHEKI*QSFSQI
Trigger: AATCTGAGAGAAGGACTGCCAAATTTTCTCATGATC...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
3UTR CAA 72 bp AGGACAGAAAACTGCCTGTACATGCTATGTCCACTTTaGGAACACAGATTTTTAACAATTATGAATGCACAA +
Preference number: 4 (lower is better)
Translates to: RTENCLYMLCPL*EHRFLTIMNAQ
Trigger: TTGTGCATTCATAATTGTTAAAAATCTGTGTTCCAAAAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
3UTR CAA 72 bp TCTCTGACATGCCCTAGAGACATTCTCCCCATTGTTTaGGTGATTAATATTTGTAGTGATAGGAATATTCTA +
Preference number: 4 (lower is better)
Translates to: SLTCPRDILPIV*VINICSDRNIL
Trigger: TAGAATATTCCTATCACTACAAATATTAATCACCAAAACAATGGGGAGAATGTCTCTAGGGCATGTCAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
3UTR CAA 72 bp TTTTTATCAACATTGGTGAATTCTACCCAAGTGAAATaGGTGAAATCCCACTTGATTATGGTGAATGATCCT +
Preference number: 4 (lower is better)
Translates to: FLSTLVNSTQVK*VKSHLIMVNDP
Trigger: AGGATCATTCACCATAATCAAGTGGGATTTCACCAATTTCACTTGGGTAGAATTCACCAATGTTGATAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTACATTTGGACAATGGATaGTTGGTAAAGTTAAATCCA +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVHLDNG*LVKLNP
Trigger: TGGATTTAACTTTACCAAGCATCCATTGTCCAAATG...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAAAACTTCTTCCAGTATaGCCACATAGAAATTGGAAA +
Preference number: 4 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVKLLPV*PHRNWK
Trigger: TTTCCAATTTCTATGTGGGCATACTGGAAGAAGTTT...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAAACGAAAAGGCAACCTaGAGAATAGGAGAAAATATT +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEENEKAT*RIGENI
Trigger: AATATTTTCTCCTATTCTGCAGGTTGCCTTTTCGTT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR GCA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGATCTACAGAGTCAATaGAAGCACTATCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: SIARLGELIHSGFEIFEEDLQSQ*KHYQNL
Trigger: AAGATTTTGATAGTGCTTGCATTGACTCTGTAGATC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACTGTATTTTGAAAAATaGACCAAGGAGCTGAATAGA +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQLYFEK*TKELNR
Trigger: TCTATTCAGCTCCTTGGTCCATTTTTCAAAATACAG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CCA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAAGTTAGAGAAAACAAATaGGAAACTCTCAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQVRENK*ETLRIW
Trigger: CCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAAC...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp ATGCCGTCCGAGCTCCTCCGGCGGCGGTCCGGCTCCCGCGCGGGCTaGTGGCTGCCTGGGTCGGAGTCGACGCCACAGCCCCGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: MPSELLRRRSGSRAG*WLPGSESTPQPRAR
Trigger: CCGGGCCCGGGGCTGTGGCGTCGACTCCGACCCAGGCAGCCAGCAGCCCGCGCGGGAGCCGGACCGCCGCCGGAGGAGCTCGGACGGCAT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp CGGGCTTCTCCGCACTCGGGCTTCAGCCAAGGAGGGGGCTCAGCATaGCGTCCGAGCTCCTCCGGCGGCGGTCCGGCTCCCGCGCGGGCT +
Preference number: 5 (lower is better)
Translates to: RASPHSGFSQGGGSA*RPSSSGGGPAPARA
Trigger: AGCCCGCGCGGGAGCCGGACCGCCGCCGGAGGAGCTCGGACGGCATGCTGAGCCCCCTCCTTGGCTGAAGCCCGAGTGCGGAGAAGCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CCA 90 bp TCGGAGTCGACGCCACAGCCCCGGGCCCGGGATCGCGGGCGAGACTaGCACGCGGATGCTGAACTGCGCGACTGCGTGTGGTCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SESTPQPRARDRGRD*HADAELRDCVWSAP
Trigger: AGGGGCCGACCACACGCAGTCGCGCAGTTCAGCATCCGCGTGCCAGTCTCGCCCGCGATCCCGGGCCCGGGGCTGTGGCGTCGACTCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp CGGGATCGCGGGCGAGACTGGCACGCGGATGCTGAACTGCGCGACTaGGTGTGGTCGGCCCCTGCGCCCGGCGGACACCGTGCATGTCCA +
Preference number: 5 (lower is better)
Translates to: RDRGRDWHADAELRD*VWSAPAPGGHRACP
Trigger: TGGACATGCACGGTGTCCGCCGGGCGCAGGGGCCGACCACACGCAGTCGCGCAGTTCAGCATCCGCGTGCCAGTCTCGCCCGCGATCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CCA 90 bp CGCGGGCGAGACTGGCACGCGGATGCTGAACTGCGCGACTGCGTGTaGTCGGCCCCTGCGCCCGGCGGACACCGTGCATGTCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RGRDWHADAELRDCV*SAPAPGGHRACPAA
Trigger: AGCAGCTGGACATGCACGGTGTCCGCCGGGCGCAGGGGCCGACCACACGCAGTCGCGCAGTTCAGCATCCGCGTGCCAGTCTCGCCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp CGTGTGGTCGGCCCCTGCGCCCGGCGGACACCGTGCATGTCCAGCTaGTCCGGTCCGAATTTCGCCGGACCCCCTCGCCCTGTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: RVVGPCARRTPCMSS*SGPNFAGPPRPVAL
Trigger: AAGGGCAACAGGGCGAGGGGGTCCGGCGAAATTCGGACCGGAGCAGCTGGACATGCACGGTGTCCGCCGGGCGCAGGGGCCGACCACACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp GTCCAGCTGCTCCGGTCCGAATTTCGCCGGACCCCCTCGCCCTGTTaGCCTTCTGATGGGGGCCAGAGGAGGGAGGCGGGCGGAGGGAGT +
Preference number: 5 (lower is better)
Translates to: VQLLRSEFRRTPSPC*PSDGGQRREAGGGS
Trigger: ACTCCCTCCGCCCGCCTCCCTCCTCTGGCCCCCATCAGAAGGGCAACAGGGCGAGGGGGTCCGGCGAAATTCGGACCGGAGCAGCTGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp CCGCTGTCTCGCGACTTCGCCGCTTTGGTCTCCTTAGCCTGCGTTTaGCCGGGCTTCTCCGCACTCGGGCTTCAGCCAAGGAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PLSRDFAALVSLACV*PGFSALGLQPRRGL
Trigger: GAGCCCCCTCCTTGGCTGAAGCCCGAGTGCGGAGAAGCCCGGGCAAACGCAGGCTAAGGAGACCAAAGCGGCGAAGTCGCGAGACAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS TCA 90 bp CACTTGCAGGCGTTGGATTTCTCGCGCTCGCGGGCTTGCCTCTTCTaGCGGATGAGCGAGCTGGCGATAGCCGCCGCCATGGCCACGACG +
Preference number: 5 (lower is better)
Translates to: HLQALDFSRSRACLF*RMSELAIAAAMATT
Trigger: CGTCGTGGCCATGGCGGCGGCTATCGCCAGCTCGCTCATCCGTCAGAAGAGGCAAGCCCGCGAGCGCGAGAAATCCAACGCCTGCAAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp GCTTGTCCGCTGTCTCGCGACTTCGCCGCTTTGGTCTCCTTAGCCTaGGTTTGCCCGGGCTTCTCCGCACTCGGGCTTCAGCCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: ACPLSRDFAALVSLA*VCPGFSALGLQPRR
Trigger: CCTCCTTGGCTGAAGCCCGAGTGCGGAGAAGCCCGGGCAAACGCAGGCTAAGGAGACCAAAGCGGCGAAGTCGCGAGACAGCGGACAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp CTCAGAAGACGGAAGTCCTCGCCGAGCGGGTCGGACTTGGGAGAGTaGTTAGGGCGGCAAGTCTCGACCACGAGCTCCCCTCGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: LRRRKSSPSGSDLGE*LGRQVSTTSSPRCG
Trigger: ACCACACCGAGGGGAGCTCGTGGTCGAGACTTGCCGCCCTAAGCACTCTCCCAAGTCCGACCCGCTCGGCGAGGACTTCCGTCTTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000448673.1
ENST00000626909.2
CDS GCA 90 bp TTTGCTGCCCCTCTCTGGGTTCGCCTCCTCCTCCTTCTCCTCCGCTaGTTGTCCGCTGTCTCGCGACTTCGCCGCTTTGGTCTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: FAAPLWVRLLLLLLR*LSAVSRLRRFGLLS
Trigger: GCTAAGGAGACCAAAGCGGCGAAGTCGCGAGACAGCGGACAAGCAGCGGAGGAGAAGGAGGAGGAGGCGAACCCAGAGAGGGGCAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp ACAGGGATCAAACAGGTAATGGCCTCGCATCTTCGCTGTTGCTGCTaGTCTGGGCGCGGCACAGTCGCAGCACAGGAATTCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: TGIKQVMASHLRCCC*SGRGTVAAQEFSRR
Trigger: GCGGCGGCTGAATTCCTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTTGATCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp CCGACAGGGATCAAACAGGTAATGGCCTCGCATCTTCGCTGTTGCTaGTGCTCTGGGCGCGGCACAGTCGCAGCACAGGAATTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PTGIKQVMASHLRCC*CSGRGTVAAQEFSR
Trigger: GCGGCTGAATTCCTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTTGATCCCTGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CCA 90 bp GATCAAACAGGTAATGGCCTCGCATCTTCGCTGTTGCTGCTGCTCTaGGCGCGGCACAGTCGCAGCACAGGAATTCAGCCGCCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: DQTGNGLASSLLLLL*ARHSRSTGIQPPQA
Trigger: TGCCTGCGGCGGCTGAATTCCTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CCA 90 bp GGATTTGCCTCCGTTCAGCACGCCAGAGACACTTCTGCTCTTGGTTaGGGTCCCGCTTCCAGATCGGGAGAACTCCGTGAGATCGTGCAG +
Preference number: 5 (lower is better)
Translates to: GFASVQHARDTSALG*GPASRSGELREIVQ
Trigger: CTGCACGATCTCACGGAGTTCTCCCGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS GCA 90 bp TTTCCGACAGGGATCAAACAGGTAATGGCCTCGCATCTTCGCTGTTaGTGCTGCTCTGGGCGCGGCACAGTCGCAGCACAGGAATTCAGC +
Preference number: 5 (lower is better)
Translates to: FPTGIKQVMASHLRC*CCSGRGTVAAQEFS
Trigger: GCTGAATTCCTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTTGATCCCTGTCGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 90 bp AGATCCCCCTGCTTTGCACGCGGCGTGTCGAAGGGTGCAAACTCCTaGCTTCCCGGAGGGTTGGGGTGGATAAGGAGTTTAGGATTAGGA +
Preference number: 5 (lower is better)
Translates to: RSPCFARGVSKGANS*LPGGLGWIRSLGLG
Trigger: TCCTAATCCTAAACTCCTTATCCACCCCAACCCTCCGGGAAGGCAGGAGTTTGCACCCTTCGACACGCCGCGTGCAAAGCAGGGGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421460.1
CDS CCA 90 bp CTCGCCCTGGCCCCTCCGAGTCTTCGACTAGTCCTTGCAACTTCTTaGCGTGATAATCGGGAAAAGTTGGCCCGTGCCAGGTTTCCGACA +
Preference number: 5 (lower is better)
Translates to: LALAPPSLRLVLATS*RDNREKLARARFPT
Trigger: TGTCGGAAACCTGGCACGGGCCAACTTTTCCCGATTATCACGCCAAGAAGTTGCAAGGACTAGTCGAAGACTCGGAGGGGCCAGGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS TCA 90 bp TTAACTTGTTTTTGTCGCAGCTGGTCTTGCCTTTGCTGGGGCTGCTaGCACACTTGCAGGCGTTGGATTTCTCGCGCTCGCGGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LTCFCRSWSCLCWGC*HTCRRWISRARGLA
Trigger: GGCAAGCCCGCGAGCGCGAGAAATCCAACGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTGCGACAAAAACAAGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS TCA 90 bp CTCTTTGGGCTTGGTCACCTTTCCACTCATAGATCCCAGCTTGCTTaGCAAGGTTCGCTCAGAAGACGGAAGTCCTCGCCGAGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: LFGLGHLSTHRSQLA*QGSLRRRKSSPSGS
Trigger: CGACCCGCTCGGCGAGGACTTCCGTCTTCTGAGCGAACCTTGTCAAGCAAGCTGGGATCTATGAGTGGAAAGGTGACCAAGCCCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000448673.1
ENST00000626909.2
CDS TCA 90 bp GCCGCCGCCGCTGCCTTAGAAGTGGAGACGCAATGGGCCTGGTGGTaGGAAACAAGCAAGATCCCACCATGGACCAAAATCTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: AAAAALEVETQWAWW*ETSKIPPWTKILKG
Trigger: GCCCTTTAAGATTTTGGTCCATGGTGGGATCTTGCTTGTTTCTCACCACCAGGCCCATTGCGTCTCCACTTCTAAGGCAGCGGCGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448673.1
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACCGAGCGGGTCGGACTaGGGAGAGTGCTTAGGGCGG +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSPSGSD*GECLGR
Trigger: CCGCCCTAAGCACTCTCCCAAGTCCGACCCGCTCGG...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCGAGCGGGTCGGACTaGGGAGAGTGCTTAGGGCGG +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAPSGSD*GECLGR
Trigger: CCGCCCTAAGCACTCTCCCAAGTCCGACCCGCTCGG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS TCA 90 bp TGGGGTCCCGCTTCCAGATCGGGAGAACTCCGTGAGATCGTGCAGTaGTGGCTCCTTGTACATGGCCACTTTCAGTGGTTTAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: WGPASRSGELREIVQ*WLLVHGHFQWFRQK
Trigger: TTTCTGCCTAAACCACTGAAAGTGGCCATGTACAAGGAGCCATCACTGCACGATCTCACGGAGTTCTCCCGATCTGGAAGCGGGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCACTTCTGCTCTTGGTaGGGGTCCCGCTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLHFCSW*GSRFQI
Trigger: GATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS GCA 90 bp CTTTTGCCCTCACTGGCTACGTTGATTCATTGTGGCTCATGGATTTaGCTCCGTTCAGCACGCCAGAGACACTTCTGCTCTTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LLPSLATLIHCGSWI*LRSARQRHFCSWLG
Trigger: CCCCAACCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGAGGGCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CCA 90 bp GCCCTTCTTTTGCCCTCACTGGCTACGTTGATTCATTGTGGCTCATaGATTTGCCTCCGTTCAGCACGCCAGAGACACTTCTGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: ALLLPSLATLIHCGS*ICLRSARQRHFCSW
Trigger: CCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGAGGGCAAAAGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACAGCTGGTCTTGCCTTaGCTGGGGCTGCTGACACAC +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSQLVLP*LGLLTH
Trigger: GTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTG...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATCTTCCCCTGTGGCTTaGCAGGATGCAGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSSSPVA*QDAATL
Trigger: GAGGGTGGCTGCATCCTGCAAAGCCACAGGGGAAGA...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCTTGGTTTGAACTCCTaGGATAGCCACCACTCGCAG +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLLGLNS*DSHHSQ
Trigger: CTGCGAGTGGTGGCTATCCAAGGAGTTCAAACCAAG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCACTTCTGCTCTTGGTaGGGGTCCCGCTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPHFCSW*GSRFQI
Trigger: GATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCCCTCACTGGCTACGTaGATTCATTGTGGCTCATGG +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLPSLAT*IHCGSW
Trigger: CCATGAGCCACAATGAATCAACGTAGCCAGTGAGGG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGCTCGCATCTTCGCTGTaGCTGCTGCTCTGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLLASSL*LLLWAR
Trigger: CCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAG...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGGGTGCTCCCAAAACTTaGCATGTCTCCCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLGAPKT*HVSLSP
Trigger: AGGAGAGAGGGAGACATGCAAAGTTTTGGGAGCACC...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTCACTTCTGCTCTTGGTaGGGGTCCCGCTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLHFCSW*GSRFQI
Trigger: GATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTG...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTGAGACACTTCTGCTCTaGGTTGGGGTCCCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLETLLL*VGVPLP
Trigger: TGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTC...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCGAGACACTTCTGCTCTaGGTTGGGGTCCCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAETLLL*VGVPLP
Trigger: TGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTC...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATTTCCCAGACATCACTaGCATACCAGGGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSFPRHH*HTRGSA
Trigger: GGCAGAGCCCCTGGTATGCAAGTGATGTCTGGGAAA...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGCTCCTCTACCTTGGCTaGCTCCCTGCACACGGCCCA +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRLLYLG*LPAHGP
Trigger: TGGGCCGTGTGCAGGGAGCAAGCCAAGGTAGAGGAG...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGCCCCAGTGGACCCACTaGAGTGTACATCATGGCAGG +
Preference number: 5 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRPQWTH*SVHHGR
Trigger: CCTGCCATGATGTACACTCAAGTGGGTCCACTGGGG...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGCCGAGCGGGTCGGACTaGGGAGAGTGCTTAGGGCGG +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWPSGSD*GECLGR
Trigger: CCGCCCTAAGCACTCTCCCAAGTCCGACCCGCTCGG...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCTCATAGATCCCAGCTaGCTTGACAAGGTTCGCTCA +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLLIDPS*LDKVRS
Trigger: TGAGCGAACCTTGTCAAGCAAGCTGGGATCTATGAG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS TCA 90 bp GAGGCTCTGGTCTTCTTCTGCGCCTCTTCTTGGAGCCGAAGAGTTTaGCCCGGGAAAAGACATTTAACTTGTTTTTGTCGCAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: EALVFFCASSWSRRV*PGKRHLTCFCRSWS
Trigger: AGACCAGCTGCGACAAAAACAAGTTAAATGTCTTTTCCCGGGTCAAACTCTTCGGCTCCAAGAAGAGGCGCAGAAGAAGACCAGAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCTTGGTTTGAACTCCTaGGATAGCCACCACTCGCAG +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPLGLNS*DSHHSQ
Trigger: CTGCGAGTGGTGGCTATCCAAGGAGTTCAAACCAAG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCATCCCTCACTGTTCATaGCCAAGTACAGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCIPHCS*PSTAWF
Trigger: AAACCAAGCTGTACTTGGCAATGAACAGTGAGGGAT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCCCTCACTGGCTACGTaGATTCATTGTGGCTCATGG +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPPSLAT*IHCGSW
Trigger: CCATGAGCCACAATGAATCAACGTAGCCAGTGAGGG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCACTCGCGCTCGCGGGCTaGCCTCTTCTGACGGATGAG +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSLALAG*PLLTDE
Trigger: CTCATCCGTCAGAAGAGGCAAGCCCGCGAGCGCGAG...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGCTTCTGCGCCTCTTCTaGGAGCCGAAGAGTTTGACC +
Preference number: 5 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALLLRLF*EPKSLT
Trigger: GGTCAAACTCTTCGGCTCCAAGAAGAGGCGCAGAAG...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTGTAATCCCAATGTGTaGAGGGAGGGACCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFACNPNV*REGPGG
Trigger: CCCACCAGGTCCCTCCCTCAACACATTGGGATTACA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTCCTCTCTCCTCTACCTaGGCTTGCTCCCTGCACACG +
Preference number: 5 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIPLSST*ACSLHT
Trigger: CGTGTGCAGGGAGCAAGCCAAGGTAGAGGAGAGAGG...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGTGGGCTCCCACAGCCTaGGGCAGCTCTTCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWWAPTA*GSSSPV
Trigger: CACAGGGGAAGAGCTGCCCAAGGCTGTGGGAGCCCA...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGATGATCTCTCCTTCTTaGTTCAGACCCAGATACCAC +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLMISPS*FRPRYH
Trigger: GTGGTATCTGGGTCTGAACAAAGAAGGAGAGATCAT...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGGAGACACTTCTGCTCTaGGTTGGGGTCCCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRETLLL*VGVPLP
Trigger: TGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTC...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTCCCTCACTGGCTACGTaGATTCATTGTGGCTCATGG +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLPSLAT*IHCGSW
Trigger: CCATGAGCCACAATGAATCAACGTAGCCAGTGAGGG...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCGCGACTTCGCCGCTTaGGTCTCCTTAGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSRDFAA*VSLACV
Trigger: AACGCAGGCTAAGGAGACCAAAGCGGCGAAGTCGCG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCATTGTCTTGCAGAGATaGTTAAAGACTCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCIVLQR*LKTLPV
Trigger: CACTGGCAGAGTCTTTAACAATCTCTGCAAGACAAT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TGGGAGGATCACTTGACCCAAGAAATTCGAGGCTGCAGTGAGCTGCGATTGTGCACATGGATTTTGAACTaGACTGCTCCATTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: WEDHLTQEIRGCSELRLCTWILN*TAPFSQ
Trigger: TTGGGAGAATGGAGCAGTCAAGTTCAAAATCCATGT...GCACAATCGCAGCTCACTGCAGCCTCGAATTTCTTGGGTCAAGTGATCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGAGAGCCACATGGATTTaGAACTTGACTGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLRATWI*NLTAPF
Trigger: GAATGGAGCAGTCAAGTTCAAAATCCATGTGGCTCT...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCTTTGTGGTGTACTaGCTTCAGCGGGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFALFVVY*LQRAAE
Trigger: TTCTGCTGCCCGCTGAAGCAAGTACACCACAAAGAG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000441825.8
CDS GCA 90 bp AGGTGTGAAAAGTTCCGAGGTGTACAAGTATCCCTCACTGTTCATTaGCAAGTACAGCTTGGTTTGAACTCCTTGGATAGCCACCACTCG +
Preference number: 5 (lower is better)
Translates to: RCEKFRGVQVSLTVH*QVQLGLNSLDSHHS
Trigger: CGAGTGGTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTTGGCAATGAACAGTGAGGGATACTTGTACACCTCGGAACTTTTCACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000455663.5
ENST00000626909.2
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCAAGTACAGCTTGGTTaGAACTCCTTGGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPQVQLG*NSLDSH
Trigger: GTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTTG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACAAGTACAGCTTGGTTaGAACTCCTTGGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSQVQLG*NSLDSH
Trigger: GTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTTG...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGTTCTTCTTCACATGGTaGCCTTTCATGATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLFFFTW*PFMISP
Trigger: AGGAGAGATCATGAAAGGCAACCATGTGAAGAAGAA...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAGGCTACGTTGATTCATaGTGGCTCATGGATTTGCCT +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSGYVDS*WLMDLP
Trigger: AGGCAAATCCATGAGCCACAATGAATCAACGTAGCC...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTGGTGGGCAAGATGGCTaGAGCCCAGGAGTTTTAGAC +
Preference number: 5 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQIGGQDG*SPGVLD
Trigger: GTCTAAAACTCCTGGGCTCAAGCCATCTTGCCCACC...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCCAGATGCTGGCAAGGTaGCAGAGAAATAGGAACACT +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPQMLAR*QRNRNT
Trigger: AGTGTTCCTATTTCTCTGCAACCTTGCCAGCATCTG...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTGCCAAAGCTTGGGGATaGCACTCTCTGAAACAATGG +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLAKAWG*HSLKQW
Trigger: CCATTGTTTCAGAGAGTGCAATCCCCAAGCTTTGGC...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTCTCATAGATCCCAGCTaGCTTGACAAGGTTCGCTCA +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLLIDPS*LDKVRS
Trigger: TGAGCGAACCTTGTCAAGCAAGCTGGGATCTATGAG...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATAGATCCCAGCTaGCTTGACAAGGTTCGCTCA +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFALIDPS*LDKVRS
Trigger: TGAGCGAACCTTGTCAAGCAAGCTGGGATCTATGAG...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCGCATCTTTCTCCTCTTaGGGCTTGGTCACCTTTCCA +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAASFSS*GLVTFP
Trigger: TGGAAAGGTGACCAAGCCCAAAGAGGAGAAAGATGC...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS TCA 90 bp GATGGCTCCTTGTACATGGCCACTTTCAGTGGTTTAGGCAGAAAATaGGCTGCAGGCTTGTTCTTCTTCACATGGTTGCCTTTCATGATC +
Preference number: 5 (lower is better)
Translates to: DGSLYMATFSGLGRK*AAGLFFFTWLPFMI
Trigger: GATCATGAAAGGCAACCATGTGAAGAAGAACAAGCCTGCAGCTCATTTTCTGCCTAAACCACTGAAAGTGGCCATGTACAAGGAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAATCCCTCACTGTTCATaGCCAAGTACAGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSIPHCS*PSTAWF
Trigger: AAACCAAGCTGTACTTGGCAATGAACAGTGAGGGAT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGGAGACACTTCTGCTCTaGGTTGGGGTCCCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWETLLL*VGVPLP
Trigger: TGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTC...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAGAGACACTTCTGCTCTaGGTTGGGGTCCCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSETLLL*VGVPLP
Trigger: TGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTC...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGGGCTACGTTGATTCATaGTGGCTCATGGATTTGCCT +
Preference number: 5 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALGYVDS*WLMDLP
Trigger: AGGCAAATCCATGAGCCACAATGAATCAACGTAGCC...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTGGCTACGTTGATTCATaGTGGCTCATGGATTTGCCT +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLGYVDS*WLMDLP
Trigger: AGGCAAATCCATGAGCCACAATGAATCAACGTAGCC...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGCCCTCACTGGCTACGTaGATTCATTGTGGCTCATGG +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRPSLAT*IHCGSW
Trigger: CCATGAGCCACAATGAATCAACGTAGCCAGTGAGGG...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGACACACTTGCAGGCGTaGGATTTCTCGCGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWTHLQA*DFSRSR
Trigger: CCGCGAGCGCGAGAAATCCAACGCCTGCAAGTGTGT...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCAGGAGTCTCCCCTCCTaGCAAAAGCAGGCTGTTTGG +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSRSLPS*QKQAVW
Trigger: CCAAACAGCCTGCTTTTGCAAGGAGGGGAGACTCCT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTGGCACTGTAGAAAGATaGCTCCTTTCCCAGACATCA +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLGTVER*LLSQTS
Trigger: TGATGTCTGGGAAAGGAGCAATCTTTCTACAGTGCC...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAAGAGAATGCTCACTCTaGCCACTTCTATTCCACATG +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSRECSL*PLLFHM
Trigger: CATGTGGAATAGAAGTGGCAAGAGTGAGCATTCTCT...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTTGCAGTGAGCTGCGATaGTGCCACTGTAATCCATCC +
Preference number: 5 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQICSELR*CHCNPS
Trigger: GGATGGATTACAGTGGCACAATCGCAGCTCACTGCA...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGCTGCAGTTATGTAAGTaGATACCACTAGAGGAACTA +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLLQLCK*IPLEEL
Trigger: TAGTTCCTCTAGTGGTATCAACTTACATAACTGCAG...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTATCCCTCACTGTTCATaGCCAAGTACAGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLIPHCS*PSTAWF
Trigger: AAACCAAGCTGTACTTGGCAATGAACAGTGAGGGAT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCATTCTTCTTCACATGGTaGCCTTTCATGATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSFFFTW*PFMISP
Trigger: AGGAGAGATCATGAAAGGCAACCATGTGAAGAAGAA...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTTCTTCTTCACATGGTaGCCTTTCATGATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPFFFTW*PFMISP
Trigger: AGGAGAGATCATGAAAGGCAACCATGTGAAGAAGAA...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTGTGGGAGAGCAAATTTaGATCAGCATTAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLVGEQI*ISISAV
Trigger: CACAGCACTAATGCTGATCAAAATTTGCTCTCCCAC...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCAAGAACACTGTTACCTaGAGCCTGAGAAGCCAATTC +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAKNTVT*SLRSQF
Trigger: GAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGGATAATCGGGAAAAGTaGGCCCGTGCCAGGTTTCCG +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWDNREK*ARARFP
Trigger: CGGAAACCTGGCACGGGCCAACTTTTCCCGATTATC...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAACTTCTCCTCCGCTGCTaGTCCGCTGTCTCGCGACTT +
Preference number: 5 (lower is better)
Translates to: SIARLGELIHSGFEIFEELLLRC*SAVSRL
Trigger: AAGTCGCGAGACAGCGGACAAGCAGCGGAGGAGAAG...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTACCACCACCGCTTCTTTaGCTGCCCCTCTCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVPPPLL*LPLSGF
Trigger: GAACCCAGAGAGGGGCAGCAAAAGAAGCGGTGGTGG...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAATTGTCGCAGCTGGTCTaGCCTTTGCTGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQLSQLV*PLLGLL
Trigger: CAGCAGCCCCAGCAAAGGCAAGACCAGCTGCGACAA...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGACATCACAGCATTTATaGCAATCTAAGTGTGATGCT +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLTSQHL*QSKCDA
Trigger: AGCATCACACTTAGATTGCAATAAATGCTGTGATGT...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAATGTAATCCCAGCGCTTaGGGAGGCCGAGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQCNPSA*GGRGRW
Trigger: CCACCTTCCTCGGCCTCCCAAAGCGCTGGGATTACA...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGTTTTGTTGTGGATTTTaGCATCTATGTTCAACAGGG +
Preference number: 5 (lower is better)
Translates to: QQHLEVRFCYRALLLPSLFCCGF*HLCSTG
Trigger: CCCTGTTGAACATAGATGCAAAAATCCACAACAAAA...CAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTATAGCTAATGCATGCTaGGCTGAACACCTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLIANAC*AEHLSD
Trigger: ATCACTGAGGTGTTCAGCCAAGCATGCATTAGCTAT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGCACAGTGACTCACAATaGGTATCCTCAGGACTTGGG +
Preference number: 5 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWHSDSQ*VSSGLG
Trigger: CCCAAGTCCTGAGGATACCAATTGTGAGTCACTGTG...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCCTCTTTGTGGTGTACTaGCTTCAGCGGGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSLFVVY*LQRAAE
Trigger: TTCTGCTGCCCGCTGAAGCAAGTACACCACAAAGAG...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000441825.8
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGGGCTCTGTGTTCTCTTaGTGGTGTACTTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRGSVFS*WCTCFS
Trigger: GCTGAAGCAAGTACACCACAAAGAGAACACAGAGCC...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000441825.8
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGGCATCTTTCTCCTCTTaGGGCTTGGTCACCTTTCCA +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRASFSS*GLVTFP
Trigger: TGGAAAGGTGACCAAGCCCAAAGAGGAGAAAGATGC...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS GCA 90 bp TTAACAAAGCCATGCTTCTTTATAAGCTGGTCCTACCCAGACAATTaGTGTCTACATTTGGAGCAGACACAGAGAGAGAGGAGATCAGAG +
Preference number: 5 (lower is better)
Translates to: LTKPCFFISWSYPDN*CLHLEQTQRERRSE
Trigger: CTCTGATCTCCTCTCTCTCTGTGTCTGCTCCAAATGTAGACAGCAATTGTCTGGGTAGGACCAGCTTATAAAGAAGCATGGCTTTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS CCA 90 bp GCTCTGAATACGACTTCCTTAACAAAGCCATGCTTCTTTATAAGCTaGTCCTACCCAGACAATTGCTGTCTACATTTGGAGCAGACACAG +
Preference number: 5 (lower is better)
Translates to: ALNTTSLTKPCFFIS*SYPDNCCLHLEQTQ
Trigger: CTGTGTCTGCTCCAAATGTAGACAGCAATTGTCTGGGTAGGACCAGCTTATAAAGAAGCATGGCTTTGTTAAGGAAGTCGTATTCAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGCTTGGTTTGAACTCCTaGGATAGCCACCACTCGCAG +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWLGLNS*DSHHSQ
Trigger: CTGCGAGTGGTGGCTATCCAAGGAGTTCAAACCAAG...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGCAAGTACAGCTTGGTTaGAACTCCTTGGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLQVQLG*NSLDSH
Trigger: GTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTTG...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTACACTTCTGCTCTTGGTaGGGGTCCCGCTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVHFCSW*GSRFQI
Trigger: GATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTG...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCACCCTCACTGGCTACGTaGATTCATTGTGGCTCATGG +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSPSLAT*IHCGSW
Trigger: CCATGAGCCACAATGAATCAACGTAGCCAGTGAGGG...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCATGTCACTGACAAATTaGAACTTTTGGGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPMSLTN*NFWVKD
Trigger: GTCCTTCACCCAAAAGTTCAAATTTGTCAGTGACAT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCAGTACAGCACAATAACTaGACCAGAATACCACAAATC +
Preference number: 5 (lower is better)
Translates to: IQQHLEVRFCYRALLLPSVQHNN*TRIPQI
Trigger: GATTTGTGGTATTCTGGTCAAGTTATTGTGCTGTAC...TGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CAA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAGGGCTGCTGACACACTaGCAGGCGTTGGATTTCTCG +
Preference number: 5 (lower is better)
Translates to: SIARLGELIHSGFEIFEEGLLTH*QALDFS
Trigger: CGAGAAATCCAACGCCTGCAAGTGTGTCAGCAGCCC...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTACATTTAACTTGTTTTaGTCGCAGCTGGTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLTFNLF*SQLVLP
Trigger: AGGCAAGACCAGCTGCGACAAAAACAAGTTAAATGT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCGAAAAGACATTTAACTaGTTTTTGTCGCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPEKTFN*FLSQLV
Trigger: GACCAGCTGCGACAAAAACAAGTTAAATGTCTTTTC...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTTTGGAGCCGAAGAGTTaGACCCGGGAAAAGACATTT +
Preference number: 5 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQILEPKS*TREKTF
Trigger: AAATGTCTTTTCCCGGGTCAAACTCTTCGGCTCCAA...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGAATAGGGAGAGGTGGTaGAGTGAGCATCTCCTGATT +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRNRERW*SEHLLI
Trigger: AATCAGGAGATGCTCACTCAACCACCTCTCCCTATT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCGCATCACCTGGAAACTaGTTAGAAATGCCAAGTTTT +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPASPGN*LEMPSF
Trigger: AAAACTTGGCATTTCTAACAAGTTTCCAGGTGATGC...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTCCATGGCAATGAGCATGTCCTCTCTTTGGATACAAACAAAACTCCTGGGAGGGTACACATAAAAAGCTaGAGGACTACCACTCTACTG +
Preference number: 5 (lower is better)
Translates to: FHGNEHVLSLDTNKTPGRVHIKS*RTTTLL
Trigger: CAGTAGAGTGGTAGTCCTCAAGCTTTTTATGTGTAC...CCTCCCAGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTCATTGCCATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGGAGCATGTCCTCTCTTaGGATACAAACAAAACTCCT +
Preference number: 5 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALEHVLS*DTNKTP
Trigger: AGGAGTTTTGTTTGTATCCAAAGAGAGGACATGCTC...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAAGAAGGCACAAAAACTaGAGCACTTCAGGGCACCAC +
Preference number: 5 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQRRHKN*STSGHH
Trigger: GTGGTGCCCTGAAGTGCTCAAGTTTTTGTGCCTTCT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGGCCTGAGCTGTATGTaGGCCCCTTTTAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVGLSCM*APFSHS
Trigger: GCTGTGGCTAAAAGGGGCCAACATACAGCTCAGGCC...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAATTCAGATTTCCAAATGGGAGAAGTaGGCCAAAACAAAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: LVKPQEHCYLEPEKPIQISKWEK*AKTKGL
Trigger: TAGCCCCTTTGTTTTGGCCAACTTCTCCCATTTGGA...AATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGGCTCTGTGTTCTCTTaGTGGTGTACTTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSGSVFS*WCTCFS
Trigger: GCTGAAGCAAGTACACCACAAAGAGAACACAGAGCC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436198.5
ENST00000441825.8
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGCATCTTTCTCCTCTTaGGGCTTGGTCACCTTTCCA +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSASFSS*GLVTFP
Trigger: TGGAAAGGTGACCAAGCCCAAAGAGGAGAAAGATGC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGATCCCTCACTGTTCATaGCCAAGTACAGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRIPHCS*PSTAWF
Trigger: AAACCAAGCTGTACTTGGCAATGAACAGTGAGGGAT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCACTGATTCTTTGAATTaGCACTCAGGTGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: RIQQHLEVRFCYRALLLPTDSLN*HSGVKS
Trigger: ACTTTTCACACCTGAGTGCAAATTCAAAGAATCAGT...GGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGATGATCTCTCCTTCTTaGTTCAGACCCAGATACCAC +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRMISPS*FRPRYH
Trigger: GTGGTATCTGGGTCTGAACAAAGAAGGAGAGATCAT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCGACAAATTTGAACTTTaGGGTGAAGGACTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFADKFEL*GEGLLE
Trigger: TTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTC...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCATGTCACTGACAAATTaGAACTTTTGGGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFAMSLTN*NFWVKD
Trigger: GTCCTTCACCCAAAAGTTCAAATTTGTCAGTGACAT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTATGTCACTGACAAATTaGAACTTTTGGGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLMSLTN*NFWVKD
Trigger: GTCCTTCACCCAAAAGTTCAAATTTGTCAGTGACAT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GCAGCCATAAAAAGGAATGAGATCATGTCATTTTCAGGGACACACATGGCGCTGAATATGGTTAAGAATTaGAAGGGTACTAGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: AAIKRNEIMSFSGTHMALNMVKN*KGTSGL
Trigger: CAGGCCACTAGTACCCTTCAAATTCTTAACCATATT...CAGCGCCATGTGTGTCCCTGAAAATGACATGATCTCATTCCTTTTTATGGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTTAGTACAGTTAGCCTaGCAGGTGACTCCAAGGAAC +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSLVQLA*QVTPRN
Trigger: GTTCCTTGGAGTCACCTGCAAGGCTAACTGTACTAA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCTTAAATAAGCTTGGGTaGCTACATGAGAACACAGAC +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFALNKLG*LHENTD
Trigger: GTCTGTGTTCTCATGTAGCAACCCAAGCTTATTTAA...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGCTCATGATTTCTCCATaGGGTGAAAGGGAGAGTGTA +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRLMISP*GERESV
Trigger: TACACTCTCCCTTTCACCCAATGGAGAAATCATGAG...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAGTCCTACCCAGACAATaGCTGTCTACATTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSVLPRQ*LSTFGA
Trigger: TGCTCCAAATGTAGACAGCAATTGTCTGGGTAGGAC...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS-3UTR CAA 90 bp AAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCACTGATTCTTTGAATTaGCACTCAGGTGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: KNSTAPGGKVLLQSPSFATDSLN*HSGVKS
Trigger: ACTTTTCACACCTGAGTGCAAATTCAAAGAATCAGT...GGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTACTGATTCTTTGAATTaGCACTCAGGTGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLTDSLN*HSGVKS
Trigger: ACTTTTCACACCTGAGTGCAAATTCAAAGAATCAGT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCATGATCTCTCCTTCTTaGTTCAGACCCAGATACCAC +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSMISPS*FRPRYH
Trigger: GTGGTATCTGGGTCTGAACAAAGAAGGAGAGATCAT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGGGCTACGTTGATTCATaGTGGCTCATGGATTTGCCT +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWGYVDS*WLMDLP
Trigger: AGGCAAATCCATGAGCCACAATGAATCAACGTAGCC...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp AAAAACAATTGGTCAAACCACAAGAACACTGTTACCTTGAGCCTGAGAAGCCAAAAGAACACTGTTACCTaGAGCCTGAGAAGCCAATTC +
Preference number: 5 (lower is better)
Translates to: KNNWSNHKNTVTLSLRSQKNTVT*SLRSQF
Trigger: GAATTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTT...TTGGCTTCTCAGGCTCAAGGTAACAGTGTTCTTGTGGTTTGACCAATTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTGCACAAACGCCTCATTaGTATAATTTGACTACTGAA +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLAQTPH*YNLTTE
Trigger: TTCAGTAGTCAAATTATACAAATGAGGCGTTTGTGC...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGCATGAAAATGTGGCTTaGTGGCCCAATAAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLHENVA*WPNKFV
Trigger: GACAAACTTATTGGGCCACAAAGCCACATTTTCATG...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCACCCAAACCTCAATTCTaGACTTCTGTGCTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSPKPQF*TSVLLQ
Trigger: TTGCAGGAGCACAGAAGTCAAGAATTGAGGTTTGGG...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GCTAGAAGAATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTACACATGTGGTAAAATaGCATAGACCTACACACATA +
Preference number: 5 (lower is better)
Translates to: ARRIQQHLEVRFCYRALLTHVVK*HRPTHI
Trigger: TATGTGTGTAGGTCTATGCAATTTTACCACATGTGT...AAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAATTCTTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAAATTGCTGTCTACATTaGGAGCAGACACAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSNCCLH*EQTQRE
Trigger: CTCTCTCTGTGTCTGCTCCAAATGTAGACAGCAATT...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS-3UTR CAA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTATGATCTCTCCTTCTTaGTTCAGACCCAGATACCAC +
Preference number: 5 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLMISPS*FRPRYH
Trigger: GTGGTATCTGGGTCTGAACAAAGAAGGAGAGATCAT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCTTCTTCTTCACATGGTaGCCTTTCATGATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSFFFTW*PFMISP
Trigger: AGGAGAGATCATGAAAGGCAACCATGTGAAGAAGAA...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGATGTCACTGACAAATTaGAACTTTTGGGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRMSLTN*NFWVKD
Trigger: GTCCTTCACCCAAAAGTTCAAATTTGTCAGTGACAT...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGGTGGGAGAGCAAATTTaGATCAGCATTAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWVGEQI*ISISAV
Trigger: CACAGCACTAATGCTGATCAAAATTTGCTCTCCCAC...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp AAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACCTGGAGGGTACAGCACAATAACTaGACCAGAATACCACAAATC +
Preference number: 5 (lower is better)
Translates to: KFELLGEGLLEEFNSTWRVQHNN*TRIPQI
Trigger: GATTTGTGGTATTCTGGTCAAGTTATTGTGCTGTAC...CCTCCAGGTGCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCACCACATAGTGCTAATTaGCTTACTACCAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSPHSAN*LTTSRP
Trigger: AGGTCTGCTGGTAGTAAGCAAATTAGCACTATGTGG...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAACGTGGAAAAGGTCCTaGCTTCCCCTTCATCTTCTG +
Preference number: 5 (lower is better)
Translates to: SIARLGELIHSGFEIFEETWKRS*LPLHLL
Trigger: CAGAAGATGAAGGGGAAGCAAGGACCTTTTCCACGT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGGTGTGTGTGAAGTGTTaGTACAAAAGAGAAATAGGC +
Preference number: 5 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLVCVKC*YKREIG
Trigger: GCCTATTTCTCTTTTGTACAAACACTTCACACACAC...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCAATTCAAGGAGAGATTaGGGTGGGAACACAAAACCA +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSNSRRD*GGNTKP
Trigger: TGGTTTTGTGTTCCCACCCAAATCTCTCCTTGAATT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTACAAGTACAGCTTGGTTaGAACTCCTTGGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVQVQLG*NSLDSH
Trigger: GTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTTG...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAACAAGTACAGCTTGGTTaGAACTCCTTGGATAGCCAC +
Preference number: 5 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQQVQLG*NSLDSH
Trigger: GTGGCTATCCAAGGAGTTCAAACCAAGCTGTACTTG...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATGGCTACGTTGATTCATaGTGGCTCATGGATTTGCCT +
Preference number: 5 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDGYVDS*WLMDLP
Trigger: AGGCAAATCCATGAGCCACAATGAATCAACGTAGCC...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGACAAATTTGAACTTTaGGGTGAAGGACTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSDKFEL*GEGLLE
Trigger: TTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCAGTTCACTAAAATGCTaGGCATTCTTATGCACAAGC +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSSSLKC*AFLCTS
Trigger: GCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTCAGAGACCATCTGTATaGACTGTTCTCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLQRPSV*TVLKVF
Trigger: GAACACTTTGAGAACAGTCAATACAGATGGTCTCTG...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGAACTCTTCGGTGAGCTaGACTGGCTTAAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWNSSVS*TGLKLE
Trigger: TTCCAGTTTTAAGCCAGTCAAGCTCACCGAAGAGTT...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGCCCTCATATGTTCATTaGGACAATGGATGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWPSYVH*DNGCLV
Trigger: TACCAAGCATCCATTGTCCAAATGAACATATGAGGG...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTAACTGCCCCTATAACTaGAGGAATTCCTTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLNCPYN*RNSFLS
Trigger: GCTCAAAAAGGAATTCCTCAAGTTATAGGGGCAGTT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGTTGCGCAGGTACATTTaGAAGATACATCAACTGTTA +
Preference number: 5 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLLRRYI*KIHQLL
Trigger: TAACAGTTGATGTATCTTCAAAATGTACCTGCGCAA...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGCCAAGAGATACAACTTaGACTCATGATTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLPRDTT*THDFSI
Trigger: AATGGAGAAATCATGAGTCAAAGTTGTATCTCTTGG...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCGAGATTGTATCAAATTaGTTAGAGGTGTGGACCAAG +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSEIVSN*LEVWTK
Trigger: CTTGGTCCACACCTCTAACAAATTTGATACAATCTC...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ACCATCTGTATTGACTGTTCTCAAAGTGTTCATTGCCAGACAATGCAGCTTTGGACTTGCAACCGTAAGTaGGAGATTGTATCAAATTTG +
Preference number: 5 (lower is better)
Translates to: TICIDCSQSVHCQTMQLWTCNRK*EIVSNL
Trigger: CAAATTTGATACAATCTCCAACTTACGGTTGCAAGT...CCAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAACAGTCAATACAGATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTATGGGGGTACAGGAATaGAGTAAAAATACCCATTCC +
Preference number: 5 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLMGVQE*SKNTHS
Trigger: GGAATGGGTATTTTTACTCAATTCCTGTACCCCCAT...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CTTCAGGGCACCACGTTAGAGAAAACAAATGGGAAACTCTCAGAATTTGGTTTGATGCAATGGGAACAGTaGAAATATTGGCTTGTTTAC +
Preference number: 5 (lower is better)
Translates to: LQGTTLEKTNGKLSEFGLMQWEQ*KYWLVY
Trigger: GTAAACAAGCCAATATTTCAACTGTTCCCATTGCAT...CAAACCAAATTCTGAGAGTTTCCCATTTGTTTTCTCTAACGTGGTGCCCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATATCCCTCACTGTTCATaGCCAAGTACAGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDIPHCS*PSTAWF
Trigger: AAACCAAGCTGTACTTGGCAATGAACAGTGAGGGAT...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTGACAAATTTGAACTTTaGGGTGAAGGACTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLDKFEL*GEGLLE
Trigger: TTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTC...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305414.8
ENST00000315930.11
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGGACAAATTTGAACTTTaGGGTGAAGGACTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWDKFEL*GEGLLE
Trigger: TTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTC...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCAAGTTCACTAAAATGCTaGGCATTCTTATGCACAAGC +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSSSLKC*AFLCTS
Trigger: GCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACT...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGAGTTCACTAAAATGCTaGGCATTCTTATGCACAAGC +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWSSLKC*AFLCTS
Trigger: GCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACT...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATGTGGGAGAGCAAATTTaGATCAGCATTAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDVGEQI*ISISAV
Trigger: CACAGCACTAATGCTGATCAAAATTTGCTCTCCCAC...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp ATGCTTGGCATTCTTATGCACAAGCTCAATCTAAATAATGGGGCTTTAGTATGGCTTCATAAAATGAGTTaGGAAGTGCTCCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: MLGILMHKLNLNNGALVWLHKMS*EVLLPL
Trigger: AAGAGGAAGGAGCACTTCCAAACTCATTTTATGAAG...CCATACTAAAGCCCCATTATTTAGATTGAGCTTGTGCATAAGAATGCCAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTTCTACCCAAGTGAAATaGGTGAAATCCCACTTGATT +
Preference number: 5 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLSTQVK*VKSHLI
Trigger: AATCAAGTGGGATTTCACCAATTTCACTTGGGTAGA...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp TTTAAACTTTTTGTGCACAGGACAGAAAACTGCCTGTACATGCTATGTCCACTTTATTCCACATGGTACTaGAAGTTCTGCTTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: FKLFVHRTENCLYMLCPLYSTWY*KFCLEQ
Trigger: TTGCTCTAAGCAGAACTTCAAGTACCATGTGGAATA...AAGTGGACATAGCATGTACAGGCAGTTTTCTGTCCTGTGCACAAAAAGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GTCACTGACAAATTTGAACTTTTGGGTGAAGGACTGCTAGAAGAATTCAACAGCACTTCCCTATACTCTTaGCATCTTCCTTTGAATCTA +
Preference number: 5 (lower is better)
Translates to: VTDKFELLGEGLLEEFNSTSLYS*HLPLNL
Trigger: TAGATTCAAAGGAAGATGCAAAGAGTATAGGGAAGT...GCTGTTGAATTCTTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTCAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATTTCTCAAAGTGTTCATaGCCAGACAATGCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDFSKCS*PDNAAL
Trigger: CAAAGCTGCATTGTCTGGCAATGAACACTTTGAGAA...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CCTTCTCTCAGATTTAGTTCACTAAAATGCTTGGCATTCTTATGCACAAGCTCATTGGACAATGGATGCTaGGTAAAGTTAAATCCATGT +
Preference number: 5 (lower is better)
Translates to: PSLRFSSLKCLAFLCTSSLDNGC*VKLNPC
Trigger: ACATGGATTTAACTTTACCAAGCATCCATTGTCCAA...TGAGCTTGTGCATAAGAATGCCAAGCATTTTAGTGAACTAAATCTGAGAGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGACAAATTTGAACTTTaGGGTGAAGGACTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVDKFEL*GEGLLE
Trigger: TTCTAGCAGTCCTTCACCCAAAAGTTCAAATTTGTC...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp AAAAAGATCATTCACCATAATCAAGTGAGAGTTATCCCTGGGATAAAAGGATGGTTTCTCAAAAAGAGCTaGAGTGACACATCTACAGAA +
Preference number: 5 (lower is better)
Translates to: KKIIHHNQVRVIPGIKGWFLKKS*SDTSTE
Trigger: TTCTGTAGATGTGTCACTCAAGCTCTTTTTGAGAAA...CCATCCTTTTATCCCAGGGATAACTCTCACTTGATTATGGTGAATGATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp GAAATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAACTGATTCTTTGAATTaGCACTCAGGTGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: EIIKLHYAKEKSTCESSVTDSLN*HSGVKS
Trigger: ACTTTTCACACCTGAGTGCAAATTCAAAGAATCAGT...TACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000441825.8
CDS-3UTR CAA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAAACTGATTCTTTGAATTaGCACTCAGGTGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: SIARLGELIHSGFEIFEETDSLN*HSGVKS
Trigger: ACTTTTCACACCTGAGTGCAAATTCAAAGAATCAGT...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp ATCATAAAGTTGCACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATCCTCATTTGTATAATTaGACTACTGAACGGGAATGT +
Preference number: 5 (lower is better)
Translates to: IIKLHYAKEKSTCESSVDPHLYN*TTEREC
Trigger: ACATTCCCGTTCAGTAGTCAAATTATACAAATGAGG...ATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTGCAACTTTATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp CACTATGCCAAAGAAAAGAGTACATGTGAATCAAGCGTAGATAGAAAACATCAATGCATTGTGACAGAATaGCAACTGTTACAAACTTCT +
Preference number: 5 (lower is better)
Translates to: HYAKEKSTCESSVDRKHQCIVTE*QLLQTS
Trigger: AGAAGTTTGTAACAGTTGCAATTCTGTCACAATGCA...TTGATGTTTTCTATCTACGCTTGATTCACATGTACTCTTTTCTTTGGCATAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS-3UTR CAA 90 bp AGTATAGCCAGACTTGGAGAACTAATTCATTCTGGTTTTGAAATTTTCGAGGAATTGAGGAATTCCTTTTaGAGCAGGCAAAATACAGAT +
Preference number: 5 (lower is better)
Translates to: SIARLGELIHSGFEIFEELRNSF*SRQNTD
Trigger: ATCTGTATTTTGCCTGCTCAAAAAGGAATTCCTCAA...TTCCTCGAAAATTTCAAAACCAGAATGAATTAGTTCTCCAAGTCTGGCTATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS TCA 72 bp GGCCCGGGATCGCGGGCGAGACTGGCACGCGGATGCTaGACTGCGCGACTGCGTGTGGTCGGCCCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: GPGSRARLARGC*TARLRVVGPCA
Trigger: GGCGCAGGGGCCGACCACACGCAGTCGCGCAGTTCAGCATCCGCGTGCCAGTCTCGCCCGCGATCCCGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp GGGCGAGACTGGCACGCGGATGCTGAACTGCGCGACTaGGTGTGGTCGGCCCCTGCGCCCGGCGGACACCGT +
Preference number: 6 (lower is better)
Translates to: GRDWHADAELRD*VWSAPAPGGHR
Trigger: ACGGTGTCCGCCGGGCGCAGGGGCCGACCACACGCAGTCGCGCAGTTCAGCATCCGCGTGCCAGTCTCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp CTCCGGTCCGAATTTCGCCGGACCCCCTCGCCCTGTTaGCCTTCTGATGGGGGCCAGAGGAGGGAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: LRSEFRRTPSPC*PSDGGQRREAG
Trigger: GCCCGCCTCCCTCCTCTGGCCCCCATCAGAAGGGCAACAGGGCGAGGGGGTCCGGCGAAATTCGGACCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CCA 72 bp GACTGGCACGCGGATGCTGAACTGCGCGACTGCGTGTaGTCGGCCCCTGCGCCCGGCGGACACCGTGCATGT +
Preference number: 6 (lower is better)
Translates to: DWHADAELRDCV*SAPAPGGHRAC
Trigger: ACATGCACGGTGTCCGCCGGGCGCAGGGGCCGACCACACGCAGTCGCGCAGTTCAGCATCCGCGTGCCAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 90 bp TCCGCTGTCTCGCGACTTCGCCGCTTTGGTCTCCTTAGCCTGCGTTaGCCCGGGCTTCTCCGCACTCGGGCTTCAGCCAAGGAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: SAVSRLRRFGLLSLR*PGLLRTRASAKEGA
Trigger: AGCCCCCTCCTTGGCTGAAGCCCGAGTGCGGAGAAGCCCGGGCAAACGCAGGCTAAGGAGACCAAAGCGGCGAAGTCGCGAGACAGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS TCA 72 bp GCGTTGGATTTCTCGCGCTCGCGGGCTTGCCTCTTCTaGCGGATGAGCGAGCTGGCGATAGCCGCCGCCATG +
Preference number: 6 (lower is better)
Translates to: ALDFSRSRACLF*RMSELAIAAAM
Trigger: CATGGCGGCGGCTATCGCCAGCTCGCTCATCCGTCAGAAGAGGCAAGCCCGCGAGCGCGAGAAATCCAACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp CGCGACTTCGCCGCTTTGGTCTCCTTAGCCTGCGTTTaGCCGGGCTTCTCCGCACTCGGGCTTCAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: RDFAALVSLACV*PGFSALGLQPR
Trigger: CCTTGGCTGAAGCCCGAGTGCGGAGAAGCCCGGGCAAACGCAGGCTAAGGAGACCAAAGCGGCGAAGTCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 90 bp TCCTTCTCCTCCGCTGCTTGTCCGCTGTCTCGCGACTTCGCCGCTTaGGTCTCCTTAGCCTGCGTTTGCCCGGGCTTCTCCGCACTCGGG +
Preference number: 6 (lower is better)
Translates to: SFSSAACPLSRDFAA*VSLACVCPGFSALG
Trigger: CCCGAGTGCGGAGAAGCCCGGGCAAACGCAGGCTAAGGAGACCAAAGCGGCGAAGTCGCGAGACAGCGGACAAGCAGCGGAGGAGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp CTGTCTCGCGACTTCGCCGCTTTGGTCTCCTTAGCCTaGGTTTGCCCGGGCTTCTCCGCACTCGGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: LSRDFAALVSLA*VCPGFSALGLQ
Trigger: CTGAAGCCCGAGTGCGGAGAAGCCCGGGCAAACGCAGGCTAAGGAGACCAAAGCGGCGAAGTCGCGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 72 bp TCCGCTGCTTGTCCGCTGTCTCGCGACTTCGCCGCTTaGGTCTCCTTAGCCTGCGTTTGCCCGGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SAACPLSRDFAA*VSLACVCPGFS
Trigger: GGAGAAGCCCGGGCAAACGCAGGCTAAGGAGACCAAAGCGGCGAAGTCGCGAGACAGCGGACAAGCAGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 72 bp CTCAGAAGACGGAAGTCCTCGCCGAGCGGGTCGGACTaGGGAGAGTGCTTAGGGCGGCAAGTCTCGACCACG +
Preference number: 6 (lower is better)
Translates to: LRRRKSSPSGSD*GECLGRQVSTT
Trigger: CGTGGTCGAGACTTGCCGCCCTAAGCACTCTCCCAAGTCCGACCCGCTCGGCGAGGACTTCCGTCTTCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000448673.1
ENST00000626909.2
CDS CAA 90 bp GCTGCTGACACACTTGCAGGCGTTGGATTTCTCGCGCTCGCGGGCTaGCCTCTTCTGACGGATGAGCGAGCTGGCGATAGCCGCCGCCAT +
Preference number: 6 (lower is better)
Translates to: AADTLAGVGFLALAG*PLLTDERAGDSRRH
Trigger: ATGGCGGCGGCTATCGCCAGCTCGCTCATCCGTCAGAAGAGGCAAGCCCGCGAGCGCGAGAAATCCAACGCCTGCAAGTGTGTCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 90 bp CAAGGTTCGCTCAGAAGACGGAAGTCCTCGCCGAGCGGGTCGGACTaGGGAGAGTGCTTAGGGCGGCAAGTCTCGACCACGAGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: QGSLRRRKSSPSGSD*GECLGRQVSTTSSP
Trigger: AGGGGAGCTCGTGGTCGAGACTTGCCGCCCTAAGCACTCTCCCAAGTCCGACCCGCTCGGCGAGGACTTCCGTCTTCTGAGCGAACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000448673.1
ENST00000626909.2
CDS CAA 90 bp GCACGCGGCGTGTCGAAGGGTGCAAACTCCTGCCTTCCCGGAGGGTaGGGGTGGATAAGGAGTTTAGGATTAGGAGGTGTCGGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: ARGVSKGANSCLPGG*GWIRSLGLGGVGWR
Trigger: CCGCCACCCGACACCTCCTAATCCTAAACTCCTTATCCACCCCAACCCTCCGGGAAGGCAGGAGTTTGCACCCTTCGACACGCCGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421460.1
CDS CCA 72 bp GGTAATGGCCTCGCATCTTCGCTGTTGCTGCTGCTCTaGGCGCGGCACAGTCGCAGCACAGGAATTCAGCCG +
Preference number: 6 (lower is better)
Translates to: GNGLASSLLLLL*ARHSRSTGIQP
Trigger: CGGCTGAATTCCTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 72 bp CAGCTGGTCTTGCCTTTGCTGGGGCTGCTGACACACTaGCAGGCGTTGGATTTCTCGCGCTCGCGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: QLVLPLLGLLTH*QALDFSRSRAC
Trigger: GCAAGCCCGCGAGCGCGAGAAATCCAACGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp GGGATCAAACAGGTAATGGCCTCGCATCTTCGCTGTTaGTGCTGCTCTGGGCGCGGCACAGTCGCAGCACAG +
Preference number: 6 (lower is better)
Translates to: GIKQVMASHLRC*CCSGRGTVAAQ
Trigger: CTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTTGATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CCA 72 bp TGCCTCCGTTCAGCACGCCAGAGACACTTCTGCTCTTaGTTGGGGTCCCGCTTCCAGATCGGGAGAACTCCG +
Preference number: 6 (lower is better)
Translates to: CLRSARQRHFCS*LGSRFQIGRTP
Trigger: CGGAGTTCTCCCGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 72 bp ACACTTGCAGGCGTTGGATTTCTCGCGCTCGCGGGCTaGCCTCTTCTGACGGATGAGCGAGCTGGCGATAGC +
Preference number: 6 (lower is better)
Translates to: TLAGVGFLALAG*PLLTDERAGDS
Trigger: GCTATCGCCAGCTCGCTCATCCGTCAGAAGAGGCAAGCCCGCGAGCGCGAGAAATCCAACGCCTGCAAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CCA 72 bp TCCGTTCAGCACGCCAGAGACACTTCTGCTCTTGGTTaGGGTCCCGCTTCCAGATCGGGAGAACTCCGTGAG +
Preference number: 6 (lower is better)
Translates to: SVQHARDTSALG*GPASRSGELRE
Trigger: CTCACGGAGTTCTCCCGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 72 bp TTGCCTCCGTTCAGCACGCCAGAGACACTTCTGCTCTaGGTTGGGGTCCCGCTTCCAGATCGGGAGAACTCC +
Preference number: 6 (lower is better)
Translates to: LPPFSTPETLLL*VGVPLPDRENS
Trigger: GGAGTTCTCCCGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 72 bp AGGGATCAAACAGGTAATGGCCTCGCATCTTCGCTGTaGCTGCTGCTCTGGGCGCGGCACAGTCGCAGCACA +
Preference number: 6 (lower is better)
Translates to: RDQTGNGLASSL*LLLWARHSRST
Trigger: TGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTTGATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 90 bp CTCATGGATTTGCCTCCGTTCAGCACGCCAGAGACACTTCTGCTCTaGGTTGGGGTCCCGCTTCCAGATCGGGAGAACTCCGTGAGATCG +
Preference number: 6 (lower is better)
Translates to: LMDLPPFSTPETLLL*VGVPLPDRENSVRS
Trigger: CGATCTCACGGAGTTCTCCCGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 90 bp GTTTCCGACAGGGATCAAACAGGTAATGGCCTCGCATCTTCGCTGTaGCTGCTGCTCTGGGCGCGGCACAGTCGCAGCACAGGAATTCAG +
Preference number: 6 (lower is better)
Translates to: VSDRDQTGNGLASSL*LLLWARHSRSTGIQ
Trigger: CTGAATTCCTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTTGATCCCTGTCGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS TCA 72 bp TGGTTGGGGTCCCGCTTCCAGATCGGGAGAACTCCGTaGGATCGTGCAGTGATGGCTCCTTGTACATGGCCA +
Preference number: 6 (lower is better)
Translates to: WLGSRFQIGRTP*DRAVMAPCTWP
Trigger: TGGCCATGTACAAGGAGCCATCACTGCACGATCTCACGGAGTTCTCCCGATCTGGAAGCGGGACCCCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS TCA 72 bp TTTTGTCGCAGCTGGTCTTGCCTTTGCTGGGGCTGCTaGCACACTTGCAGGCGTTGGATTTCTCGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: FCRSWSCLCWGC*HTCRRWISRAR
Trigger: GCGAGCGCGAGAAATCCAACGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTGCGACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp TGGATTTGCCTCCGTTCAGCACGCCAGAGACACTTCTaGTCTTGGTTGGGGTCCCGCTTCCAGATCGGGAGA +
Preference number: 6 (lower is better)
Translates to: WICLRSARQRHF*SWLGSRFQIGR
Trigger: TCTCCCGATCTGGAAGCGGGACCCCAACCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS GCA 72 bp AAACAGGTAATGGCCTCGCATCTTCGCTGTTGCTGCTaGTCTGGGCGCGGCACAGTCGCAGCACAGGAATTC +
Preference number: 6 (lower is better)
Translates to: KQVMASHLRCCC*SGRGTVAAQEF
Trigger: GAATTCCTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp ATCAAACAGGTAATGGCCTCGCATCTTCGCTGTTGCTaGTGCTCTGGGCGCGGCACAGTCGCAGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: IKQVMASHLRCC*CSGRGTVAAQE
Trigger: TTCCTGTGCTGCGACTGTGCCGCGCCCAGAGCAGCAGCAACAGCGAAGATGCGAGGCCATTACCTGTTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp TGCTTTGCACGCGGCGTGTCGAAGGGTGCAAACTCCTaGCTTCCCGGAGGGTTGGGGTGGATAAGGAGTTTA +
Preference number: 6 (lower is better)
Translates to: CFARGVSKGANS*LPGGLGWIRSL
Trigger: TAAACTCCTTATCCACCCCAACCCTCCGGGAAGGCAGGAGTTTGCACCCTTCGACACGCCGCGTGCAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421460.1
CDS CCA 72 bp GCCCCTCCGAGTCTTCGACTAGTCCTTGCAACTTCTTaGCGTGATAATCGGGAAAAGTTGGCCCGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: APPSLRLVLATS*RDNREKLARAR
Trigger: CCTGGCACGGGCCAACTTTTCCCGATTATCACGCCAAGAAGTTGCAAGGACTAGTCGAAGACTCGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CCA 72 bp AAGGGTGCAAACTCCTGCCTTCCCGGAGGGTTGGGGTaGATAAGGAGTTTAGGATTAGGAGGTGTCGGGTGG +
Preference number: 6 (lower is better)
Translates to: KGANSCLPGGLG*IRSLGLGGVGW
Trigger: CCACCCGACACCTCCTAATCCTAAACTCCTTATCCACCCCAACCCTCCGGGAAGGCAGGAGTTTGCACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421460.1
CDS TCA 72 bp CTTGGTCACCTTTCCACTCATAGATCCCAGCTTGCTTaGCAAGGTTCGCTCAGAAGACGGAAGTCCTCGCCG +
Preference number: 6 (lower is better)
Translates to: LGHLSTHRSQLA*QGSLRRRKSSP
Trigger: CGGCGAGGACTTCCGTCTTCTGAGCGAACCTTGTCAAGCAAGCTGGGATCTATGAGTGGAAAGGTGACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000448673.1
ENST00000626909.2
CDS TCA 72 bp GCTTCCAGATCGGGAGAACTCCGTGAGATCGTGCAGTaGTGGCTCCTTGTACATGGCCACTTTCAGTGGTTT +
Preference number: 6 (lower is better)
Translates to: ASRSGELREIVQ*WLLVHGHFQWF
Trigger: AAACCACTGAAAGTGGCCATGTACAAGGAGCCATCACTGCACGATCTCACGGAGTTCTCCCGATCTGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS TCA 72 bp GCTGCCTTAGAAGTGGAGACGCAATGGGCCTGGTGGTaGGAAACAAGCAAGATCCCACCATGGACCAAAATC +
Preference number: 6 (lower is better)
Translates to: AALEVETQWAWW*ETSKIPPWTKI
Trigger: GATTTTGGTCCATGGTGGGATCTTGCTTGTTTCTCACCACCAGGCCCATTGCGTCTCCACTTCTAAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448673.1
CDS CCA 72 bp GAGTGTAAGTGCTGTCCTCATCTTTGGTGCCATCAATaGTTCCATCCGCCTGCAGCTGCAAGTGGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: ECKCCPHLWCHQ*FHPPAAASGSL
Trigger: AAGGCTACCACTTGCAGCTGCAGGCGGATGGAACCATTGATGGCACCAAAGATGAGGACAGCACTTACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000455663.5
ENST00000626909.2
CDS CCA 72 bp TCCTTGCAACTTCTTGGCGTGATAATCGGGAAAAGTTaGCCCGTGCCAGGTTTCCGACAGGGATCAAACAGG +
Preference number: 6 (lower is better)
Translates to: SLQLLGVIIGKS*PVPGFRQGSNR
Trigger: CCTGTTTGATCCCTGTCGGAAACCTGGCACGGGCCAACTTTTCCCGATTATCACGCCAAGAAGTTGCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 72 bp CTCACTGGCTACGTTGATTCATTGTGGCTCATGGATTaGCCTCCGTTCAGCACGCCAGAGACACTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: LTGYVDSLWLMD*PPFSTPETLLL
Trigger: GAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 72 bp AGCCCTTCTTTTGCCCTCACTGGCTACGTTGATTCATaGTGGCTCATGGATTTGCCTCCGTTCAGCACGCCA +
Preference number: 6 (lower is better)
Translates to: SPSFALTGYVDS*WLMDLPPFSTP
Trigger: TGGCGTGCTGAACGGAGGCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGAGGGCAAAAGAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 72 bp GTCCTTGCAACTTCTTGGCGTGATAATCGGGAAAAGTaGGCCCGTGCCAGGTTTCCGACAGGGATCAAACAG +
Preference number: 6 (lower is better)
Translates to: VLATSWRDNREK*ARARFPTGIKQ
Trigger: CTGTTTGATCCCTGTCGGAAACCTGGCACGGGCCAACTTTTCCCGATTATCACGCCAAGAAGTTGCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 90 bp TCTTTTGCCCTCACTGGCTACGTTGATTCATTGTGGCTCATGGATTaGCCTCCGTTCAGCACGCCAGAGACACTTCTGCTCTTGGTTGGG +
Preference number: 6 (lower is better)
Translates to: SFALTGYVDSLWLMD*PPFSTPETLLLLVG
Trigger: CCCAACCAAGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGAGGGCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 90 bp CTTCGACTAGTCCTTGCAACTTCTTGGCGTGATAATCGGGAAAAGTaGGCCCGTGCCAGGTTTCCGACAGGGATCAAACAGGTAATGGCC +
Preference number: 6 (lower is better)
Translates to: LRLVLATSWRDNREK*ARARFPTGIKQVMA
Trigger: GGCCATTACCTGTTTGATCCCTGTCGGAAACCTGGCACGGGCCAACTTTTCCCGATTATCACGCCAAGAAGTTGCAAGGACTAGTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 90 bp CTGTTACAGAGCCCTTCTTTTGCCCTCACTGGCTACGTTGATTCATaGTGGCTCATGGATTTGCCTCCGTTCAGCACGCCAGAGACACTT +
Preference number: 6 (lower is better)
Translates to: LLQSPSFALTGYVDS*WLMDLPPFSTPETL
Trigger: AAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGAGGGCAAAAGAAGGGCTCTGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 90 bp GTAAGGTTCTGTTACAGAGCCCTTCTTTTGCCCTCACTGGCTACGTaGATTCATTGTGGCTCATGGATTTGCCTCCGTTCAGCACGCCAG +
Preference number: 6 (lower is better)
Translates to: VRFCYRALLLPSLAT*IHCGSWICLRSARQ
Trigger: CTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS TCA 72 bp CCAGGGGTAGGAAGCTTCTTGGTCATGTCGTCACTGTaGGTTTCTGCGGTTTGCAATAGTCTGCATCTGAGC +
Preference number: 6 (lower is better)
Translates to: PGVGSFLVMSSL*VSAVCNSLHLS
Trigger: GCTCAGATGCAGACTATTGCAAACCGCAGAAACTCACAGTGACGACATGACCAAGAAGCTTCCTACCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448673.1
CDS GCA 72 bp TCACTGGCTACGTTGATTCATTGTGGCTCATGGATTTaGCTCCGTTCAGCACGCCAGAGACACTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SLATLIHCGSWI*LRSARQRHFCS
Trigger: AGAGCAGAAGTGTCTCTGGCGTGCTGAACGGAGGCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS CAA 72 bp TTGGGCTTGGTCACCTTTCCACTCATAGATCCCAGCTaGCTTGACAAGGTTCGCTCAGAAGACGGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: LGLVTFPLIDPS*LDKVRSEDGSP
Trigger: AGGACTTCCGTCTTCTGAGCGAACCTTGTCAAGCAAGCTGGGATCTATGAGTGGAAAGGTGACCAAGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000448673.1
ENST00000626909.2
CDS CAA 90 bp CTTAAGCTGAGGCTCTTCCGGCTCTGTGTTCTCTTTGTGGTGTACTaGCTTCAGCGGGCAGCAGAAGATTTCGTGACACTTAGCACGAAA +
Preference number: 6 (lower is better)
Translates to: LKLRLFRLCVLFVVY*LQRAAEDFVTLSTK
Trigger: TTTCGTGCTAAGTGTCACGAAATCTTCTGCTGCCCGCTGAAGCAAGTACACCACAAAGAGAACACAGAGCCGGAAGAGCCTCAGCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000436198.5
ENST00000441825.8
ENST00000448673.1
ENST00000455663.5
CDS CAA 72 bp ACATTTAACTTGTTTTTGTCGCAGCTGGTCTTGCCTTaGCTGGGGCTGCTGACACACTTGCAGGCGTTGGAT +
Preference number: 6 (lower is better)
Translates to: TFNLFLSQLVLP*LGLLTHLQALD
Trigger: ATCCAACGCCTGCAAGTGTGTCAGCAGCCCCAGCAAAGGCAAGACCAGCTGCGACAAAAACAAGTTAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 72 bp GAGCCGAAGAGTTTGACCCGGGAAAAGACATTTAACTaGTTTTTGTCGCAGCTGGTCTTGCCTTTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: EPKSLTREKTFN*FLSQLVLPLLG
Trigger: CCCCAGCAAAGGCAAGACCAGCTGCGACAAAAACAAGTTAAATGTCTTTTCCCGGGTCAAACTCTTCGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 90 bp ATTCAACAGCACCTGGAGGTAAGGTTCTGTTACAGAGCCCTTCTTTaGCCCTCACTGGCTACGTTGATTCATTGTGGCTCATGGATTTGC +
Preference number: 6 (lower is better)
Translates to: IQQHLEVRFCYRALL*PSLATLIHCGSWIC
Trigger: GCAAATCCATGAGCCACAATGAATCAACGTAGCCAGTGAGGGCAAAAGAAGGGCTCTGTAACAGAACCTTACCTCCAGGTGCTGTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS TCA 72 bp GTCTTCTTCTGCGCCTCTTCTTGGAGCCGAAGAGTTTaGCCCGGGAAAAGACATTTAACTTGTTTTTGTCGC +
Preference number: 6 (lower is better)
Translates to: VFFCASSWSRRV*PGKRHLTCFCR
Trigger: GCGACAAAAACAAGTTAAATGTCTTTTCCCGGGTCAAACTCTTCGGCTCCAAGAAGAGGCGCAGAAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS GCA 72 bp CCATGCTTCTTTATAAGCTGGTCCTACCCAGACAATTaGTGTCTACATTTGGAGCAGACACAGAGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: PCFFISWSYPDN*CLHLEQTQRER
Trigger: CCTCTCTCTCTGTGTCTGCTCCAAATGTAGACAGCAATTGTCTGGGTAGGACCAGCTTATAAAGAAGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305414.8
CDS GCA 72 bp TCTTATGTGGACGACAGCAGGCAAACAGAGAGCTTGTaGAGAGAAACTCCCTTAGAAGCATCTTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SYVDDSRQTESL*RETPLEASFSS
Trigger: AGAGGAGAAAGATGCTTCTAAGGGAGTTTCTCTGCACAAGCTCTCTGTTTGCCTGCTGTCGTCCACATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS CAA 72 bp GGTCTTCTTCTGCGCCTCTTCTTGGAGCCGAAGAGTTaGACCCGGGAAAAGACATTTAACTTGTTTTTGTCG +
Preference number: 6 (lower is better)
Translates to: GLLLRLFLEPKS*TREKTFNLFLS
Trigger: CGACAAAAACAAGTTAAATGTCTTTTCCCGGGTCAAACTCTTCGGCTCCAAGAAGAGGCGCAGAAGAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315930.11
CDS CAA 72 bp ACATCTTATGTGGACGACAGCAGGCAAACAGAGAGCTaGTGCAGAGAAACTCCCTTAGAAGCATCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: TSYVDDSRQTES*CRETPLEASFS
Trigger: GGAGAAAGATGCTTCTAAGGGAGTTTCTCTGCACAAGCTCTCTGTTTGCCTGCTGTCGTCCACATAAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441825.8
CDS TCA 72 bp TTGTACATGGCCACTTTCAGTGGTTTAGGCAGAAAATaGGCTGCAGGCTTGTTCTTCTTCACATGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: LYMATFSGLGRK*AAGLFFFTWLP
Trigger: AGGCAACCATGTGAAGAAGAACAAGCCTGCAGCTCATTTTCTGCCTAAACCACTGAAAGTGGCCATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000626909.2
CDS GCA 72 bp AAGTTCCGAGGTGTACAAGTATCCCTCACTGTTCATTaGCAAGTACAGCTTGGTTTGAACTCCTTGGATAGC +
Preference number: 6 (lower is better)
Translates to: KFRGVQVSLTVH*QVQLGLNSLDS
Trigger: GCTATCCAAGGAGTTCAAACCAAGCTGTACTTGGCAATGAACAGTGAGGGATACTTGTACACCTCGGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305414.8
ENST00000315930.11
ENST00000436198.5
ENST00000441825.8
ENST00000455663.5
ENST00000626909.2
CDS CCA 72 bp ACGACTTCCTTAACAAAGCCATGCTTCTTTATAAGCTaGTCCTACCCAGACAATTGCTGTCTACATTTGGAG +
Preference number: 6 (lower is better)
Translates to: TTSLTKPCFFIS*SYPDNCCLHLE
Trigger: CTCCAAATGTAGACAGCAATTGTCTGGGTAGGACCAGCTTATAAAGAAGCATGGCTTTGTTAAGGAAGTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305414.8