RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGF12 (Homo sapiens)

Ensembl gene IDs: ENSG00000114279

Ensembl transcript IDs: ENST00000418610.1, ENST00000430714.5, ENST00000440901.4, ENST00000445105.7, ENST00000448795.5, ENST00000450716.5, ENST00000454309.6, ENST00000491636.1, ENST00000682572.1, ENST00000682819.1, ENST00000683451.1, ENST00000683935.1, ENST00000684282.1, ENST00000684728.1

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTATATTGACCTTGAAATACGGCAACCAATGGCAAGGTTTGAGGTaGGGGCCTAGAGCTTCTGCAAAGTGTATATATTTTAGGGAGTCA +
Preference number: 1 (lower is better)
Translates to: TILTLKYGNQWQGLR*GPRASAKCIYFRES
Trigger: TGACTCCCTAAAATATATACACTTTGCAGAAGCTCTAGGCCCTCACCTCAAACCTTGCCATTGGTTGCCGTATTTCAAGGTCAATATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR GCA 90 bp CAAAACGATTACTATGAGAATAGGATGGCTTGCTGCCCTCCAATTTaGGGAAGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCT +
Preference number: 1 (lower is better)
Translates to: QNDYYENRMACCPPI*GSTKVSELANGTSA
Trigger: AGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCTTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR GCA 90 bp AAATTTCAAAGCCAAAACGATTACTATGAGAATAGGATGGCTTGCTaGCCTCCAATTTGCGGAAGCACAAAAGTCTCTGAATTAGCAAAT +
Preference number: 1 (lower is better)
Translates to: KFQSQNDYYENRMAC*PPICGSTKVSELAN
Trigger: ATTTGCTAATTCAGAGACTTTTGTGCTTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGCTTTGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR TCA 90 bp AAATTTAGTGTATTACTGGTACCCTTCTGTGTTCTAGGAAACAAATaGATTGCAAACTGGACTTGTAACAGGATCATACATAGAGCAACA +
Preference number: 1 (lower is better)
Translates to: KFSVLLVPFCVLGNK*IANWTCNRIIHRAT
Trigger: TGTTGCTCTATGTATGATCCTGTTACAAGTCCAGTTTGCAATTCATTTGTTTCCTAGAACACAGAAGGGTACCAGTAATACACTAAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR GCA 90 bp ATTACTGGCAACGTAGTCATACTTACTTCTTCACCAAGAAATCAGTaGTCCCAAATTAGGAATTCCAAACTTTTCAATATGCAACCTTTA +
Preference number: 1 (lower is better)
Translates to: ITGNVVILTSSPRNQ*SQIRNSKLFNMQPL
Trigger: TAAAGGTTGCATATTGAAAAGTTTGGAATTCCTAATTTGGGAGCACTGATTTCTTGGTGAAGAAGTAAGTATGACTACGTTGCCAGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR TCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTTCAGGTGTCCACACCTaGGACATTGCTTTGTGGATA +
Preference number: 2 (lower is better)
Translates to: FLLLSAAHTILSVGVIAASGVHT*DIALWI
Trigger: TATCCACAAAGCAATGTCTCAGGTGTGGACACCTGA...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR CCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTTTATACCTCACCACCTaGACATGGCACTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: FLLLSAAHTILSVGVIAALYLTT*TWHWQK
Trigger: CTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAA...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR GCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGGAAGATTTTGAGTaGAGAATCTTAGCCACTAGG +
Preference number: 2 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQKEDFE*RILATR
Trigger: CCTAGTGGCTAAGATTCTGCACTCAAAATCTTCCTT...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR CCA 90 bp GTTGAATCAAGAGTGACAAGAAGAAATACAGCTAGAGTTATATTTTTGCCCCAGCTCACCACCTGGACATaGCACTGGCAAAAGTCACTT +
Preference number: 2 (lower is better)
Translates to: VESRVTRRNTARVIFLPQLTTWT*HWQKSL
Trigger: AAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAG...CTGGGGCAAAAATATAACTCTAGCTGTATTTCTTCTTGTCACTCTTGATTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR CAA 90 bp GTATTCTTAACTATGTATGTGCCTTCTCTTACACTGAGTTCTTTTTaGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATA +
Preference number: 2 (lower is better)
Translates to: VFLTMYVPSLTLSSF*LLSAAHTILSVGVI
Trigger: TATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAAAGAACTCAGTGTAAGAGAAGGCACATACATAGTTAAGAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR CAA 90 bp GGGCCTAGAGCTTCTGCAAAGTGTATATATTTTAGGGAGTCATATTaGGAACAATACATGCTGGACAGTAGAGATATAGGAGAAGTTACA +
Preference number: 2 (lower is better)
Translates to: GPRASAKCIYFRESY*EQYMLDSRDIGEVT
Trigger: TGTAACTTCTCCTATATCTCTACTGTCCAGCATGTATTGTTCCAAATATGACTCCCTAAAATATATACACTTTGCAGAAGCTCTAGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR CCA 90 bp GTTGAATCAAGAGTGACAAGAAGAAATACAGCTAGAGTTATATTTTTGCCCCAGTTTCCTCTCCTTGGGTaGATTTACTGGAAGGAAATG +
Preference number: 2 (lower is better)
Translates to: VESRVTRRNTARVIFLPQFPLLG*IYWKEM
Trigger: CATTTCCTTCCAGTAAATCCACCCAAGGAGAGGAAA...CTGGGGCAAAAATATAACTCTAGCTGTATTTCTTCTTGTCACTCTTGATTCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR CCA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTTTCCTCTCCTTGGGTaGATTTACTGGAAGGAAATG +
Preference number: 2 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFFPLLG*IYWKEM
Trigger: CATTTCCTTCCAGTAAATCCACCCAAGGAGAGGAAA...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR GCA 90 bp GTTGAATCAAGAGTGACAAGAAGAAATACAGCTAGAGTTATATTTTTGCCCCAGAAGGAAGATTTTGAGTaGAGAATCTTAGCCACTAGG +
Preference number: 2 (lower is better)
Translates to: VESRVTRRNTARVIFLPQKEDFE*RILATR
Trigger: CCTAGTGGCTAAGATTCTGCACTCAAAATCTTCCTT...CTGGGGCAAAAATATAACTCTAGCTGTATTTCTTCTTGTCACTCTTGATTCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR GCA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATACCACACCTGAGACATTaGTTTGTGGATACTCTCAAA +
Preference number: 2 (lower is better)
Translates to: STKVSELANGTSAPFVSIPHLRH*FVDTLK
Trigger: TTTGAGAGTATCCACAAAGCAATGTCTCAGGTGTGG...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR CCA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTTATTTTCCTCTCCTTaGGTGGATTTACTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFLFSSP*VDLLEG
Trigger: TCCTTCCAGTAAATCCACCCAAGGAGAGGAAAATAA...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR TCA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATAAGGAAAAGTGACGAATaGATTGAAGACCCAGAAATC +
Preference number: 2 (lower is better)
Translates to: STKVSELANGTSAPFVSIRKSDE*IEDPEI
Trigger: GATTTCTGGGTCTTCAATTCATTCGTCACTTTTCCT...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR CCA 90 bp GTTGAATCAAGAGTGACAAGAAGAAATACAGCTAGAGTTATATTTTTGCCCCAGTTAGGGAGTCATATTTaGAACAATACATGCTGGACA +
Preference number: 2 (lower is better)
Translates to: VESRVTRRNTARVIFLPQLGSHI*NNTCWT
Trigger: TGTCCAGCATGTATTGTTCCAAATATGACTCCCTAA...CTGGGGCAAAAATATAACTCTAGCTGTATTTCTTCTTGTCACTCTTGATTCAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR GCA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATATTTGTTCTTCCCAACTaGTTAGGGAAATTCCTTCAT +
Preference number: 2 (lower is better)
Translates to: STKVSELANGTSAPFVSIFVLPN*LGKFLH
Trigger: ATGAAGGAATTTCCCTAAGCAGTTGGGAAGAACAAA...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR CAA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTTCCACACCTGAGACATaGCTTTGTGGATACTCTCAA +
Preference number: 3 (lower is better)
Translates to: FLLLSAAHTILSVGVIAASTPET*LCGYSQ
Trigger: TTGAGAGTATCCACAAAGCAATGTCTCAGGTGTGGA...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR CAA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAACCACTAGGTCTTGCGTaGTCATTTTATTTTCCTCTC +
Preference number: 3 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQPLGLA*SFYFPL
Trigger: GAGAGGAAAATAAAATGACAACGCAAGACCTAGTGG...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR GCA 72 bp AGCCAAAACGATTACTATGAGAATAGGATGGCTTGCTaGCCTCCAATTTGCGGAAGCACAAAAGTCTCTGAA +
Preference number: 3 (lower is better)
Translates to: SQNDYYENRMAC*PPICGSTKVSE
Trigger: TTCAGAGACTTTTGTGCTTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR GCA 72 bp CAAAGCCAAAACGATTACTATGAGAATAGGATGGCTTaGTGCCCTCCAATTTGCGGAAGCACAAAAGTCTCT +
Preference number: 3 (lower is better)
Translates to: QSQNDYYENRMA*CPPICGSTKVS
Trigger: AGAGACTTTTGTGCTTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR CAA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAATGCAACAAGCAAGCTTaGGTTCAATTTTCTTGTCCT +
Preference number: 3 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQCNKQA*VQFSCP
Trigger: AGGACAAGAAAATTGAACCAAAGCTTGCTTGTTGCA...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR CAA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTGAATTTTCTACCACATaGCAACAAGCAAGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAEFSTT*QQASFG
Trigger: ACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTC...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR TCA 72 bp ACCTTGAAATACGGCAACCAATGGCAAGGTTTGAGGTaGGGGCCTAGAGCTTCTGCAAAGTGTATATATTTT +
Preference number: 3 (lower is better)
Translates to: TLKYGNQWQGLR*GPRASAKCIYF
Trigger: AAAATATATACACTTTGCAGAAGCTCTAGGCCCTCACCTCAAACCTTGCCATTGGTTGCCGTATTTCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR TCA 72 bp TTGCTGCCCTCCAATTTGCGGAAGCACAAAAGTCTCTaGATTAGCAAATGGAACTTCAGCTCCATTTGTTTC +
Preference number: 3 (lower is better)
Translates to: LLPSNLRKHKSL*ISKWNFSSICF
Trigger: GAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCTTCCGCAAATTGGAGGGCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR GCA 72 bp TACTATGAGAATAGGATGGCTTGCTGCCCTCCAATTTaGGGAAGCACAAAAGTCTCTGAATTAGCAAATGGA +
Preference number: 3 (lower is better)
Translates to: YYENRMACCPPI*GSTKVSELANG
Trigger: TCCATTTGCTAATTCAGAGACTTTTGTGCTTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR CAA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGTTTATTTTCCTCTCCTaGGGTGGATTTACTGGAAGG +
Preference number: 3 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWFIFLS*GGFTGR
Trigger: CCTTCCAGTAAATCCACCCAAGGAGAGGAAAATAAA...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR CCA 72 bp AATTTCAAAGCCAAAACGATTACTATGAGAATAGGATaGCTTGCTGCCCTCCAATTTGCGGAAGCACAAAAG +
Preference number: 3 (lower is better)
Translates to: NFKAKTITMRIG*LAALQFAEAQK
Trigger: CTTTTGTGCTTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGCTTTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR-3UTR CAA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATTTTATTTTCCTCTCCTaGGGTGGATTTACTGGAAGG +
Preference number: 3 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNFIFLS*GGFTGR
Trigger: CCTTCCAGTAAATCCACCCAAGGAGAGGAAAATAAA...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR CAA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACCCACTAGGTCTTGCGTaGTCATTTTATTTTCCTCTC +
Preference number: 3 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNPLGLA*SFYFPL
Trigger: GAGAGGAAAATAAAATGACAACGCAAGACCTAGTGG...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR TCA 72 bp GTATTACTGGTACCCTTCTGTGTTCTAGGAAACAAATaGATTGCAAACTGGACTTGTAACAGGATCATACAT +
Preference number: 3 (lower is better)
Translates to: VLLVPFCVLGNK*IANWTCNRIIH
Trigger: ATGTATGATCCTGTTACAAGTCCAGTTTGCAATTCATTTGTTTCCTAGAACACAGAAGGGTACCAGTAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR-3UTR CAA 90 bp GTTGAATCAAGAGTGACAAGAAGAAATACAGCTAGAGTTATATTTTTGCCCCAGCAAATGCAATTTGCGTaGACTAATTTCCTAGGACTT +
Preference number: 3 (lower is better)
Translates to: VESRVTRRNTARVIFLPQQMQFA*TNFLGL
Trigger: AAGTCCTAGGAAATTAGTCAACGCAAATTGCATTTG...CTGGGGCAAAAATATAACTCTAGCTGTATTTCTTCTTGTCACTCTTGATTCAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTATGCATCGCGCCGGCTaGGGCTTTCCAGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIMHRAG*GFPGAG
Trigger: GCCGGCCCCTGGAAAGCCGCAGCCGGCGCGATGCAT...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAAGGGAGCGCCCGTCTTTaGTGGGGCTGGAGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQGSARL*WGWSGA
Trigger: AGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCC...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTGCCTCACCGGCCTCTTaGGGCCGCTGCAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAASPAS*GRCRSA
Trigger: TGCGCTTCTGCAGCGGCCGCAAGAGGCCGGTGAGGC...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTAACACCCCGAGGACGTaGCTCTCGCACAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSINTPRT*LSHRER
Trigger: GCGCTCCCTGTGCGAGAGGCACGTCCTCGGGGTGTT...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR TCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTTGTTTCCAGCTGCGGTaGGAGCAACTCCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAACFQLR*EQLPAS
Trigger: GCTGGCCGGGAGTTGCTCTCACCGCAGCTGGAAACA...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR TCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTAGAAGCGCACTTTGCTaGACACCCCGAGGACGTGCC +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIRSALC*TPRGRA
Trigger: GGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCT...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTTTGGACTCCCTCGCCTaGCGCTTCTGCCGGATCAAG +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSILDSLA*RFCRIK
Trigger: CTTGATCCGGCAGAAGCGGCAGGCGAGGGAGTCCAA...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTTTTGAGCTGGGGTTCTaGTCTCCGCCTCACCGGCCT +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIFELGF*SPPHRP
Trigger: AGGCCGGTGAGGCGGAGACCAGAACCCCAGCTCAAA...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGTCGGTCCCTTTCGAGTaGTGGGAAGTTCAATGGAAG +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRSVPFE*WEVQWK
Trigger: CTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGA...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGATGGTACCATCTGGGTaGATCTGCAGGAAGTATCCC +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRMVPSG*ICRKYP
Trigger: GGGATACTTCCTGCAGATGCACCCAGATGGTACCAT...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAATTTGCACCCCAAACTTaGACCCCAAGGCGATCGGCG +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQFAPQT*TPRRSA
Trigger: CGCCGATCGCCTTGGGGTGCAAGTTTGGGGTGCAAA...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTGGTCCCAGGCCCTCTTaGGAAGTAGACGTTTGCACC +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAGPRPS*EVDVCT
Trigger: GGTGCAAACGTCTACTTCGCAAGAGGGCCTGGGACC...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACGGCCCCAGCCTCTACTaGGCCCTCCGGCTTGCGCTC +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNGPSLY*ALRLAL
Trigger: GAGCGCAAGCCGGAGGGCGCAGTAGAGGCTGGGGCC...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAAGTTGGCCGGAAGATGTaGGCCCGCTTCAGATTCCCA +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQVGRKM*ARFRFP
Trigger: TGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAAC...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAATTACAAAGCAGAGTCTaGACCCAGGCGGGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQLQSRV*TQAGSA
Trigger: CGCGCTACCCGCCTGGGTCCAGACTCTGCTTTGTAA...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTGGCTGGAGCGGCGCTTaGAGGCCGACACTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFGWSGA*RPTLGR
Trigger: GCGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCC...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGCGTCTTTGCTGGGGCTaGAGCGGCGCTTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLRLCWG*SGAWRP
Trigger: CGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACG...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGAGCGCCCGTCTTTGCTaGGGCTGGAGCGGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLSARLC*GWSGAW
Trigger: CCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCT...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR TCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGTTGTCACAATCCCTTTaGGCTGGGGTTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRLSQSL*AGVLCS
Trigger: AGAGCAAAGAACCCCAGCTCAAAGGGATTGTGACAA...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGCCACGGGAATTAGATTaGAGAGAGTGTAGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRPRELD*RECSRC
Trigger: ACAGCGACTACACTCTCTTCAATCTAATTCCCGTGG...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGTGCAGGAAGTATCCCTaGTGGCTGAATAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRCRKYP*WLNNLV
Trigger: GACAAGGTTATTCAGCCAGCAGGGATACTTCCTGCA...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAACCATCTGGGTGCATCTaGAGGAAGTATCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQPSGCI*RKYPCW
Trigger: CCAGCAGGGATACTTCCTGCAGATGCACCCAGATGG...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTCTAGCCTTCACTCCTTaGATGGCCACTACACGCAGG +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSILAFTP*MATTRR
Trigger: CCTGCGTGTAGTGGCCATCCAAGGAGTGAAGGCTAG...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAACTAGCCTTCACTCCTTaGATGGCCACTACACGCAGG +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQLAFTP*MATTRR
Trigger: CCTGCGTGTAGTGGCCATCCAAGGAGTGAAGGCTAG...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATCCGAGAGGCGCGAAGTaGGAGCGGTTACCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNPRGAK*ERLPGV
Trigger: GACTCCGGGTAACCGCTCCCACTTCGCGCCTCTCGG...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGACACTCGGTCGCTGTTaGACTCCCTCGCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLTLGRC*TPSPAA
Trigger: AGCGGCAGGCGAGGGAGTCCAACAGCGACCGAGTGT...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR TCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGTGGCAAGGTTTGAGGTaGGGGCCTAGAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWWQGLR*GPRASA
Trigger: TGCAGAAGCTCTAGGCCCTCACCTCAAACCTTGCCA...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACTGCGGCCCGCGGTTCTaGAGATTAGGAGGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNCGPRF*RLGGPS
Trigger: GGACGGACCTCCTAATCTTCAGAACCGCGGGCCGCA...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAATAGGATGGCTTGCTaGCCTCCAATTTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQNRMAC*PPICGS
Trigger: GCTTCCGCAAATTGGAGGGCAGCAAGCCATCCTATT...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTCCTTGGTCCCATCAATaGTACCATCTGGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIPWSHQ*YHLGAS
Trigger: AGATGCACCCAGATGGTACCATTGATGGGACCAAGG...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGCTTTGCCTCCATTCATaGTTGGTGTTCCAGAACTTT +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRLCLHS*LVFQNF
Trigger: AAAGTTCTGGAACACCAACCATGAATGGAGGCAAAG...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTCTCACCACCTGGACATaGCACTGGCAAAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAALTTWT*HWQKSL
Trigger: AAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAG...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAACTCACCACCTGGACATaGCACTGGCAAAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQLTTWT*HWQKSL
Trigger: AAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAG...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGGTTCGGGGTACCAAGTaGAAGGGGAAGAACGATGCC +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWVRGTK*KGKNDA
Trigger: GGCATCGTTCTTCCCCTTCCACTTGGTACCCCGAAC...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR TCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTTCAGGTGTCCACACCTaGGACATTGCTTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSISGVHT*DIALWI
Trigger: TATCCACAAAGCAATGTCTCAGGTGTGGACACCTGA...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTGGCAGTGCTAAAATTTaGGGAGGCTGCAGTATCGAA +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIGSAKI*GGCSIE
Trigger: TTCGATACTGCAGCCTCCTCAAATTTTAGCACTGCC...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATACCTGGGTCTGGAAGCTaGAGGCAGGAGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: STKVSELANGTSAPFVSIPGSGS*RQELSS
Trigger: GGAGGACAGCTCCTGCCTGCAGCTTCCAGACCCAGG...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp GCCAAAACGATTACTATGAGAATAGGATGGCTTGCTGCCCTCCAATTTGCGGAATGCAGGAAGTATCCCTaGTGGCTGAATAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: AKTITMRIGWLAALQFAECRKYP*WLNNLV
Trigger: GACAAGGTTATTCAGCCAGCAGGGATACTTCCTGCA...TTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTATGGTACCATCTGGGTaGATCTGCAGGAAGTATCCC +
Preference number: 4 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGMVPSG*ICRKYP
Trigger: GGGATACTTCCTGCAGATGCACCCAGATGGTACCAT...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGAAGGAAGATTTTGAGTaGAGAATCTTAGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRKEDFE*RILATR
Trigger: CCTAGTGGCTAAGATTCTGCACTCAAAATCTTCCTT...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACGTGAGGTCTACAGAATaGATCGCGCCGGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNVRSTE*IAPAAA
Trigger: AGCCGCAGCCGGCGCGATGCATTCTGTAGACCTCAC...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAACGCTGTTTTCGTCCTTaGTCCCATCAATGGTACCAT +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQRCFRP*SHQWYH
Trigger: ATGGTACCATTGATGGGACCAAGGACGAAAACAGCG...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACTCCCCTCAGGCTTCCTaGGTCTGGAAGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNSPQAS*VWKLQA
Trigger: TGCCTGCAGCTTCCAGACCCAGGAAGCCTGAGGGGA...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTACCTGGACATGGCACTaGCAAAAGTCACTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSITWTWH*QKSLQH
Trigger: ATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGT...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp GCCAAAACGATTACTATGAGAATAGGATGGCTTGCTGCCCTCCAATTTGCGGAATTATACCTCACCACCTaGACATGGCACTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: AKTITMRIGWLAALQFAELYLTT*TWHWQK
Trigger: CTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAA...TTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATCGGCCACCCGAGTTCTaGAATTCCGAGAGGCGCGAA +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNRPPEF*NSERRE
Trigger: TTCGCGCCTCTCGGAATTCCAGAACTCGGGTGGCCG...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR TCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGAAACCAAGCTCGGCCTaGTTCTTGCTGGCGGTACAG +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLKPSSA*FLLAVQ
Trigger: CTGTACCGCCAGCAAGAATCAGGCCGAGCTTGGTTT...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATTCCGTCCCAGCAGGGTaGGGTCTACAGAATGCATCG +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNSVPAG*GLQNAS
Trigger: CGATGCATTCTGTAGACCTCACCCTGCTGGGACGGA...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGAGGGTGAAATCGATTTaGTATTTCTGGGTCTATGTT +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRRVKSI*YFWVYV
Trigger: AACATAGACCCAGAAATAGCAAATCGATTTCACCCT...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTTGCTGGGAAGTTCAATaGAAGTTGGCCGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGCWEVQ*KLAGRC
Trigger: ACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCA...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp GCCAAAACGATTACTATGAGAATAGGATGGCTTGCTGCCCTCCAATTTGCGGAAACAATCCCTTTGAGCTaGGGTTCTTTGCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: AKTITMRIGWLAALQFAETIPLS*GSLLSI
Trigger: AATGGAGAGCAAAGAACCCCAGCTCAAAGGGATTGT...TTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTAGGAAGTATCCCTGCTaGCTGAATAACCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIRKYPC*LNNLVT
Trigger: TGTGACAAGGTTATTCAGCCAGCAGGGATACTTCCT...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTATCAATGGTACCATCTaGGTGCATCTGCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIINGTI*VHLQEV
Trigger: TACTTCCTGCAGATGCACCCAGATGGTACCATTGAT...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAAATCAATGGTACCATCTaGGTGCATCTGCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQINGTI*VHLQEV
Trigger: TACTTCCTGCAGATGCACCCAGATGGTACCATTGAT...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTGCTGGCGGTACAGTGTaGAAGAATAGATCACATAGT +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAAGGTV*KNRSHS
Trigger: ACTATGTGATCTATTCTTCCACACTGTACCGCCAGC...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGACAATCCCTTTGAGCTaGGGTTCTGGTCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLTIPLS*GSGLRL
Trigger: GAGGCGGAGACCAGAACCCCAGCTCAAAGGGATTGT...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR TCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTTGGAGTGAAAACATCTaGACTGTAGAGATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAWSENI*TVEIAF
Trigger: GAAGGCTATCTCTACAGTTCAGATGTTTTCACTCCA...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATAAACCAAGCTCGGCCTaGTTCTTGCTGGCGGTACAG +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNKPSSA*FLLAVQ
Trigger: CTGTACCGCCAGCAAGAATCAGGCCGAGCTTGGTTT...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGACCAATGGCAAGGTTTaGGGTGAGGGCCTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLTNGKV*GEGLEL
Trigger: AAGCTCTAGGCCCTCACCTCAAACCTTGCCATTGGT...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGTTGTCACAATCCCTTTaGGCTGGGGTTCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLLSQSL*AGVLVS
Trigger: GGAGACCAGAACCCCAGCTCAAAGGGATTGTGACAA...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTGCTCGGCCTGATTCTTaGTGGCGGTACAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFARPDS*WRYSVE
Trigger: TTCCACACTGTACCGCCAGCAAGAATCAGGCCGAGC...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATGCTCGGCCTGATTCTTaGTGGCGGTACAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNARPDS*WRYSVE
Trigger: TTCCACACTGTACCGCCAGCAAGAATCAGGCCGAGC...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTCTTGATTCACAACTTTaGCTCCATTCATGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSILDSQL*LHSWLV
Trigger: CACCAACCATGAATGGAGGCAAAGTTGTGAATCAAG...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGAATTTTCTACCACATTaGAACAAGCAAGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: EMGKWEGREGEGMREGRRNFLPH*NKQALV
Trigger: AACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATT...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp GCCAAAACGATTACTATGAGAATAGGATGGCTTGCTGCCCTCCAATTTGCGGAACCACACCTGAGACATTaGTTTGTGGATACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: AKTITMRIGWLAALQFAEPHLRH*FVDTLK
Trigger: TTTGAGAGTATCCACAAAGCAATGTCTCAGGTGTGG...TTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGTGCTGCCCTCCAATTTaGGGAAGCACAAAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWCCPPI*GSTKVS
Trigger: AGAGACTTTTGTGCTTCCGCAAATTGGAGGGCAGCA...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCAAAATAACAAGACGTaGCTCTGTTGGAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWQNNKT*LCWRGA
Trigger: TGCGCCTCTCCAACAGAGGCACGTCTTGTTATTTTG...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGTGCGAAGTAGACGTTTaGACCCCAAACTTGCACCCC +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLCEVDV*TPNLHP
Trigger: GGGGTGCAAGTTTGGGGTGCAAACGTCTACTTCGCA...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGCGGCCTGATTCTTGCTaGCGGTACAGTGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLRPDSC*RYSVEE
Trigger: TTCTTCCACACTGTACCGCCAGCAAGAATCAGGCCG...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTAATGTGATGAGGGCTTaGTTTTCTTCACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAANVMRA*FSSLCS
Trigger: GGAACAGAGTGAAGAAAACCAAGCCCTCATCACATT...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTAGCTATGTTGAATCTTaGTTCACAACTTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAASYVES*FTTLPP
Trigger: TGGAGGCAAAGTTGTGAATCAAGATTCAACATAGCT...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAGCTATGTTGAATCTTaGTTCACAACTTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQSYVES*FTTLPP
Trigger: TGGAGGCAAAGTTGTGAATCAAGATTCAACATAGCT...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAATCTCTACACCACTCCTaGTTTGTAGGACTAAATAGA +
Preference number: 4 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQSLHHS*FVGLNR
Trigger: TCTATTTAGTCCTACAAATCAGGAGTGGTGTAGAGA...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTAGGAAAAGTGACGAATaGATTGAAGACCCAGAAATC +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIRKSDE*IEDPEI
Trigger: GATTTCTGGGTCTTCAATTCATTCGTCACTTTTCCT...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTAAATCACCAAAGTACTaGAGGAACACGTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAKSPKY*RNTCFD
Trigger: ATCAAAGCACGTGTTCCTTCAGTACTTTGGTGATTT...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTCTTGATTCACAACTTTaGCTCCATTCATGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGLDSQL*LHSWLV
Trigger: CACCAACCATGAATGGAGGCAAAGTTGTGAATCAAG...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTCTGTTCTTTCTTTCCTaGCACAAGACAGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGLFFLS*HKTGYK
Trigger: TTTGTACCCTGTCTTGTGGCAGGAAAGAAAGAACAG...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGTTTGCTCCTTTCAGCTaGTCACACAATCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWFAPFS*SHNPVC
Trigger: ACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAA...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTAAGTTCAATGGAAGTTaGCCGGAAGATGTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFKFNGS*PEDVGP
Trigger: CGGGCCCACATCTTCCGGCCAACTTCCATTGAACTT...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGAGGAAGTATCCCTGCTaGCTGAATAACCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWRKYPC*LNNLVT
Trigger: TGTGACAAGGTTATTCAGCCAGCAGGGATACTTCCT...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTTTATTTTCCTCTCCTTaGGTGGATTTACTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSILFSSP*VDLLEG
Trigger: TCCTTCCAGTAAATCCACCCAAGGAGAGGAAAATAA...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACAAGACGTGCCTCTGTTaGAGAGGCGCAAGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNKTCLC*RGASVV
Trigger: TACAACGCTTGCGCCTCTCCAACAGAGGCACGTCTT...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGAGGTTAGTCAAAGTCTaGGCAGTGGCGACAAAATGT +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWRLVKV*AVATKC
Trigger: ACATTTTGTCGCCACTGCCCAGACTTTGACTAACCT...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR TCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGCCACGGGAATTAGATTaGAGAGAGTGTAGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLPRELD*RECSRC
Trigger: ACAGCGACTACACTCTCTTCAATCTAATTCCCGTGG...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGTTTGACCTTCTTTATTaGGTCCCAGAAACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWFDLLY*VPETKL
Trigger: GAGCTTGGTTTCTGGGACTCAATAAAGAAGGTCAAA...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTAAGGAACACGTGCTTTaGTTATTATTCCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGKEHVL*LLFPPV
Trigger: AACAGGTGGGAATAATAATCAAAGCACGTGTTCCTT...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTTGGCGACAAAATGTGTaGAAATCCAGATGTAAACTT +
Preference number: 4 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIWRQNV*KSRCKL
Trigger: AAGTTTACATCTGGATTTTCACACATTTTGTCGCCA...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR GCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCCACACCTGAGACATTaGTTTGTGGATACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWPHLRH*FVDTLK
Trigger: TTTGAGAGTATCCACAAAGCAATGTCTCAGGTGTGG...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCTGTTCTTTCTTTCCTaGCACAAGACAGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWLFFLS*HKTGYK
Trigger: TTTGTACCCTGTCTTGTGGCAGGAAAGAAAGAACAG...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTTTTGTTCTTCCCAACTaGTTAGGGAAATTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAFVLPN*LGKFLH
Trigger: ATGAAGGAATTTCCCTAAGCAGTTGGGAAGAACAAA...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTGAGAATAGGATGGCTTaGTGCCCTCCAATTTGCGGA +
Preference number: 4 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFENRMA*CPPICG
Trigger: TCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTC...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGTTTCCTCTCCTTGGGTaGATTTACTGGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWFPLLG*IYWKEM
Trigger: CATTTCCTTCCAGTAAATCCACCCAAGGAGAGGAAA...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGACTATGAGAATAGGATaGCTTGCTGCCCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWTMRIG*LAALQF
Trigger: AAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGT...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR CAA 72 bp ACTATGTATGTGCCTTCTCTTACACTGAGTTCTTTTTaGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: TMYVPSLTLSSF*LLSAAHTILSV
Trigger: AACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAAAGAACTCAGTGTAAGAGAAGGCACATACATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATAGTATCCCTGCTGGCTaGATAACCTTGTCACAATCC +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNSIPAG*ITLSQS
Trigger: GGATTGTGACAAGGTTATTCAGCCAGCAGGGATACT...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATTCAGGTGTCCACACCTaGGACATTGCTTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNSGVHT*DIALWI
Trigger: TATCCACAAAGCAATGTCTCAGGTGTGGACACCTGA...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGTCTCTACACCACTCCTaGTTTGTAGGACTAAATAGA +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWSLHHS*FVGLNR
Trigger: TCTATTTAGTCCTACAAATCAGGAGTGGTGTAGAGA...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGAAGGAAGATTTTGAGTaGAGAATCTTAGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWKEDFE*RILATR
Trigger: CCTAGTGGCTAAGATTCTGCACTCAAAATCTTCCTT...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATCGCTGTTTTCGTCCTTaGTCCCATCAATGGTACCAT +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNRCFRP*SHQWYH
Trigger: ATGGTACCATTGATGGGACCAAGGACGAAAACAGCG...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATAAGTATCCCTGCTGGCTaGATAACCTTGTCACAATCC +
Preference number: 4 (lower is better)
Translates to: STKVSELANGTSAPFVSISIPAG*ITLSQS
Trigger: GGATTGTGACAAGGTTATTCAGCCAGCAGGGATACT...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGTTTGACCTTCTTTATTaGGTCCCAGAAACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLFDLLY*VPETKL
Trigger: GAGCTTGGTTTCTGGGACTCAATAAAGAAGGTCAAA...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp GTTGAATCAAGAGTGACAAGAAGAAATACAGCTAGAGTTATATTTTTGCCCCAGTCCAGAACTTTTCCTTaGACGCCCTTGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VESRVTRRNTARVIFLPQSRTFP*TPLFFS
Trigger: GGAGAAAAACAAGGGCGTTCAAGGAAAAGTTCTGGA...CTGGGGCAAAAATATAACTCTAGCTGTATTTCTTCTTGTCACTCTTGATTCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACTCCAGAACTTTTCCTTaGACGCCCTTGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNSRTFP*TPLFFS
Trigger: GGAGAAAAACAAGGGCGTTCAAGGAAAAGTTCTGGA...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR GCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACTTTGCTCCTTTCAGCTaGTCACACAATCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNFAPFS*SHNPVC
Trigger: ACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAA...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATGCTGGCGGTACAGTGTaGAAGAATAGATCACATAGT +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNAGGTV*KNRSHS
Trigger: ACTATGTGATCTATTCTTCCACACTGTACCGCCAGC...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp GTTGAATCAAGAGTGACAAGAAGAAATACAGCTAGAGTTATATTTTTGCCCCAGGCCTCCATTCATGGTTaGTGTTCCAGAACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VESRVTRRNTARVIFLPQASIHG*CSRTFP
Trigger: AGGAAAAGTTCTGGAACACCAACCATGAATGGAGGC...CTGGGGCAAAAATATAACTCTAGCTGTATTTCTTCTTGTCACTCTTGATTCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATGCCTCCATTCATGGTTaGTGTTCCAGAACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNASIHG*CSRTFP
Trigger: AGGAAAAGTTCTGGAACACCAACCATGAATGGAGGC...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATAACCTGGACATGGCACTaGCAAAAGTCACTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: STKVSELANGTSAPFVSITWTWH*QKSLQH
Trigger: ATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGT...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATTGGAGTGAAAACATCTaGACTGTAGAGATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNWSENI*TVEIAF
Trigger: GAAGGCTATCTCTACAGTTCAGATGTTTTCACTCCA...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATAATGTGATGAGGGCTTaGTTTTCTTCACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNNVMRA*FSSLCS
Trigger: GGAACAGAGTGAAGAAAACCAAGCCCTCATCACATT...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATTTTCCTCTCCTTGGGTaGATTTACTGGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNFPLLG*IYWKEM
Trigger: CATTTCCTTCCAGTAAATCCACCCAAGGAGAGGAAA...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR CAA 72 bp ACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTaGTCCTACACAAAGGAAGATTTTGAGTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: TTLQQASFGSIF*SYTKEDFECRI
Trigger: GATTCTGCACTCAAAATCTTCCTTTGTGTAGGACAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGATTTGCATTCTGGAGTaGAAACATCTGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: AREFSTTLQQASFGSIFLICILE*KHLNCR
Trigger: TCTACAGTTCAGATGTTTTCACTCCAGAATGCAAAT...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACTCAGATTCCCAAATCTaGGAAGCCAATCTGATGATT +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNSDSQI*EANLMI
Trigger: AATCATCAGATTGGCTTCCCAGATTTGGGAATCTGA...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACTTATTTTCCTCTCCTTaGGTGGATTTACTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNLFSSP*VDLLEG
Trigger: TCCTTCCAGTAAATCCACCCAAGGAGAGGAAAATAA...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR CAA 72 bp CACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTaGGTTCAATTTTCTTGTCCTACACAAAGGAAGATT +
Preference number: 4 (lower is better)
Translates to: HVNFLPHCNKQA*VQFSCPTQRKI
Trigger: AATCTTCCTTTGTGTAGGACAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACATTTGCATTCTGGAGTaGAAACATCTGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNICILE*KHLNCR
Trigger: TCTACAGTTCAGATGTTTTCACTCCAGAATGCAAAT...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATGTTCTAGGAAACAAATaGATTGCAAACTGGACTTGT +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNVLGNK*IANWTC
Trigger: ACAAGTCCAGTTTGCAATTCATTTGTTTCCTAGAAC...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTGTTCTAGGAAACAAATaGATTGCAAACTGGACTTGT +
Preference number: 4 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFVLGNK*IANWTC
Trigger: ACAAGTCCAGTTTGCAATTCATTTGTTTCCTAGAAC...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR TCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATTCAAGTAAGGTGTATTaGCCAGAAAGCTATTTTGTG +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNSSKVY*PESYFV
Trigger: CACAAAATAGCTTTCTGGTCAATACACCTTACTTGA...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR TCA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTAAGCACAAAAGTCTCTaGATTAGCAAATGGAACTTC +
Preference number: 4 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFKHKSL*ISKWNF
Trigger: GAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCTT...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATAATCTGCGTAGCCAATTaGAAAGCATTACTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: STKVSELANGTSAPFVSIICVAN*KALLKA
Trigger: GGCTTTTAGTAATGCTTTGCAATTGGCTACGCAGAT...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR GCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATAATTTTCTACCACATTaGAACAAGCAAGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNNFLPH*NKQALV
Trigger: AACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATT...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CCA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATATTAGGGAGTCATATTTaGAACAATACATGCTGGACA +
Preference number: 4 (lower is better)
Translates to: STKVSELANGTSAPFVSILGSHI*NNTCWT
Trigger: TGTCCAGCATGTATTGTTCCAAATATGACTCCCTAA...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CCA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATATTGAATTTTTAACTTaGGCTCCAGGAAAAATCCTG +
Preference number: 4 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNIEFLT*APGKIL
Trigger: CAGGATTTTTCCTGGAGCCCAAGTTAAAAATTCAAT...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000445105.7
3UTR CAA 72 bp GACTGTGGTAAGGTACAAACGCAAATGCAATTTGCGTaGACTAATTTCCTAGGACTTATTTCCTTATGTAAA +
Preference number: 4 (lower is better)
Translates to: DCGKVQTQMQFA*TNFLGLISLCK
Trigger: TTTACATAAGGAAATAAGTCCTAGGAAATTAGTCAACGCAAATTGCATTTGCGTTTGTACCTTACCACAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
3UTR CAA 72 bp GCTTCTGCAAAGTGTATATATTTTAGGGAGTCATATTaGGAACAATACATGCTGGACAGTAGAGATATAGGA +
Preference number: 4 (lower is better)
Translates to: ASAKCIYFRESY*EQYMLDSRDIG
Trigger: TCCTATATCTCTACTGTCCAGCATGTATTGTTCCAAATATGACTCCCTAAAATATATACACTTTGCAGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS GCA 90 bp CGCAGCCATAGCTGCTCAGCGAGGGCCTCAGGCCCCAGCCTCTACTaGGCCCTCCGGCTTGCGCTCCGCCGGGGCGAGGGCAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: RSHSCSARASGPSLY*ALRLALRRGEGRTW
Trigger: CCAGGTCCTGCCCTCGCCCCGGCGGAGCGCAAGCCGGAGGGCGCAGTAGAGGCTGGGGCCTGAGGCCCTCGCTGAGCAGCTATGGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 90 bp TCTCGCACAGGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGGCGCTTaGAGGCCGACACTCGGTCGCTGTTGGACTCCCTCGCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: SRTGSARLCWGWSGA*RPTLGRCWTPSPAA
Trigger: AGCGGCAGGCGAGGGAGTCCAACAGCGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGCGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 90 bp CGAGGACGTGCCTCTCGCACAGGGAGCGCCCGTCTTTGCTGGGGCTaGAGCGGCGCTTGGAGGCCGACACTCGGTCGCTGTTGGACTCCC +
Preference number: 5 (lower is better)
Translates to: RGRASRTGSARLCWG*SGAWRPTLGRCWTP
Trigger: GGGAGTCCAACAGCGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGCGAGAGGCACGTCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 90 bp ACACCCCGAGGACGTGCCTCTCGCACAGGGAGCGCCCGTCTTTGCTaGGGCTGGAGCGGCGCTTGGAGGCCGACACTCGGTCGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: TPRGRASRTGSARLC*GWSGAWRPTLGRCW
Trigger: CCAACAGCGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGCGAGAGGCACGTCCTCGGGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 90 bp GCATCGCGCCGGCTGCGGCTTTCCAGGGGCCGGCCACCCGAGTTCTaGAATTCCGAGAGGCGCGAAGTGGGAGCGGTTACCCGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: ASRRLRLSRGRPPEF*NSERREVGAVTRSL
Trigger: CAGACTCCGGGTAACCGCTCCCACTTCGCGCCTCTCGGAATTCCAGAACTCGGGTGGCCGGCCCCTGGAAAGCCGCAGCCGGCGCGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS TCA 90 bp TCCGCCTCACCGGCCTCTTGCGGCCGCTGCAGAAGCGCACTTTGCTaGACACCCCGAGGACGTGCCTCTCGCACAGGGAGCGCCCGTCTT +
Preference number: 5 (lower is better)
Translates to: SASPASCGRCRSALC*TPRGRASRTGSARL
Trigger: AAGACGGGCGCTCCCTGTGCGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAGCGGCCGCAAGAGGCCGGTGAGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 90 bp TTGCGGCCGCTGCAGAAGCGCACTTTGCTGAACACCCCGAGGACGTaGCTCTCGCACAGGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: LRPLQKRTLLNTPRT*LSHRERPSLLGLER
Trigger: CCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGCGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAGCGGCCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 90 bp CGGCGCTTGGAGGCCGACACTCGGTCGCTGTTGGACTCCCTCGCCTaGCGCTTCTGCCGGATCAAGGAGCTGGCTATCGCCGCAGCCATA +
Preference number: 5 (lower is better)
Translates to: RRLEADTRSLLDSLA*RFCRIKELAIAAAI
Trigger: TATGGCTGCGGCGATAGCCAGCTCCTTGATCCGGCAGAAGCGGCAGGCGAGGGAGTCCAACAGCGACCGAGTGTCGGCCTCCAAGCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS TCA 90 bp CTGCGGCCCGCGGTTCTGAAGATTAGGAGGTCCGTCCCAGCAGGGTaGGGTCTACAGAATGCATCGCGCCGGCTGCGGCTTTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LRPAVLKIRRSVPAG*GLQNASRRLRLSRG
Trigger: GCCCCTGGAAAGCCGCAGCCGGCGCGATGCATTCTGTAGACCTCACCCTGCTGGGACGGACCTCCTAATCTTCAGAACCGCGGGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 90 bp GGTCCGTCCCAGCAGGGTGAGGTCTACAGAATGCATCGCGCCGGCTaGGGCTTTCCAGGGGCCGGCCACCCGAGTTCTGGAATTCCGAGA +
Preference number: 5 (lower is better)
Translates to: GPSQQGEVYRMHRAG*GFPGAGHPSSGIPR
Trigger: TCTCGGAATTCCAGAACTCGGGTGGCCGGCCCCTGGAAAGCCGCAGCCGGCGCGATGCATTCTGTAGACCTCACCCTGCTGGGACGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 90 bp AGCACTGCAGTCCCCTCGCCGAGGATTGCCTTGGCCACACGCACATaGAGCGGGAAGTCCCCCGATAGGGACAACCACATACCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: STAVPSPRIALATRT*SGKSPDRDNHIPLL
Trigger: GAGCAAAGGTATGTGGTTGTCCCTATCGGGGGACTTCCCGCTGCATGTGCGTGTGGCCAAGGCAATCCTCGGCGAGGGGACTGCAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS-3UTR CAA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGAGGGAGCGCCCGTCTTaGCTGGGGCTGGAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: EMGKWEGREGEGMREGRRRERPS*LGLERR
Trigger: GCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCT...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 90 bp GCTTCCTGGGTCTGGAAGCTGCAGGCAGGAGCTGTCCTCCGAGCGTaGTGCTGCAGGTGTAGTGACAGATCATCCCACTTTGCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: ASWVWKLQAGAVLRA*CCRCSDRSSHFALW
Trigger: CCAGAGAGCAAAGTGGGATGATCTGTCACTACACCTGCAGCACCACGCTCGGAGGACAGCTCCTGCCTGCAGCTTCCAGACCCAGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491636.1
ENST00000682819.1
CDS GCA 90 bp TCCTGGGTCTGGAAGCTGCAGGCAGGAGCTGTCCTCCGAGCGTGGTaGTGCAGGTGTAGTGACAGATCATCCCACTTTGCTCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: SWVWKLQAGAVLRAW*CRCSDRSSHFALWM
Trigger: CATCCAGAGAGCAAAGTGGGATGATCTGTCACTACACCTGCAGCACCACGCTCGGAGGACAGCTCCTGCCTGCAGCTTCCAGACCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491636.1
ENST00000682819.1
CDS-3UTR CAA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTCGCCTCACCGGCCTCTaGCGGCCGCTGCAGAAGCGC +
Preference number: 5 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIRLTGL*RPLQKR
Trigger: GCGCTTCTGCAGCGGCCGCAAGAGGCCGGTGAGGCG...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS TCA 90 bp GAAGGAGAGGAAGGCAGCAATTTAACTCCCTGCGGCCCGCGGTTCTaGAGATTAGGAGGTCCGTCCCAGCAGGGTGAGGTCTACAGAATG +
Preference number: 5 (lower is better)
Translates to: EGEEGSNLTPCGPRF*RLGGPSQQGEVYRM
Trigger: CATTCTGTAGACCTCACCCTGCTGGGACGGACCTCCTAATCTTCAGAACCGCGGGCCGCAGGGAGTTAAATTGCTGCCTTCCTCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS TCA 90 bp CAGTGCTGCAATGGACATAGCATCTCCTCCTCTATCGACCTAGTATaGTGCTCGCTCCCCAAGCACTGCAGTCCCCTCGCCGAGGATTGC +
Preference number: 5 (lower is better)
Translates to: QCCNGHSISSSIDLV*CSLPKHCSPLAEDC
Trigger: GCAATCCTCGGCGAGGGGACTGCAGTGCTTGGGGAGCGAGCATCATACTAGGTCGATAGAGGAGGAGATGCTATGTCCATTGCAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS CCA 90 bp GAGGCCTGTGGTGCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTaGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGGCCCGCTTCA +
Preference number: 5 (lower is better)
Translates to: EACGALLSISVPFEC*EVQWKLAGRCGPAS
Trigger: TGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGCACCACAGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS GCA 90 bp CCTTTGAGCTGGGGTTCTTTGCTCTCCATTTCGGTCCCTTTCGAGTaGTGGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGGCCCGCT +
Preference number: 5 (lower is better)
Translates to: PLSWGSLLSISVPFE*WEVQWKLAGRCGPA
Trigger: AGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGAACCCCAGCTCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000450716.5
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
CDS GCA 90 bp AGGACACTTAGGAGCAGCAGCAGATTGCCTCTACAGGGGATACGTTaGGACGCGCATCTGATACTGAAATGCATGCACAGTGCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: RTLRSSSRLPLQGIR*DAHLILKCMHSARS
Trigger: TGAGCGGGCACTGTGCATGCATTTCAGTATCAGATGCGCGTCGCAACGTATCCCCTGTAGAGGCAATCTGCTGCTGCTCCTAAGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418610.1
CDS GCA 90 bp AGGGACAACCACATACCTTTGCTCTCCATTTCGGTCCCTTTCGAGTaGTGGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGGCCCGCT +
Preference number: 5 (lower is better)
Translates to: RDNHIPLLSISVPFE*WEVQWKLAGRCGPA
Trigger: AGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGTATGTGGTTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS GCA 90 bp GCACATGCAGCGGGAAGTCCCCCGATAGGGACAACCACATACCTTTaGTCTCCATTTCGGTCCCTTTCGAGTGCTGGGAAGTTCAATGGA +
Preference number: 5 (lower is better)
Translates to: AHAAGSPPIGTTTYL*SPFRSLSSAGKFNG
Trigger: TCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGTATGTGGTTGTCCCTATCGGGGGACTTCCCGCTGCATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS CCA 90 bp TGGAAGTTGGCCGGAAGATGTGGGCCCGCTTCAGATTCCCAAATCTaGGAAGCCAATCTGATGATTTCGCCCGTACTTCCTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: WKLAGRCGPASDSQI*EANLMISPVLPSFP
Trigger: GGGGAAGGAAGGAAGTACGGGCGAAATCATCAGATTGGCTTCCCAGATTTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000430714.5
ENST00000445105.7
ENST00000450716.5
ENST00000491636.1
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CCA 90 bp TTGAGCTGGGGTTCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTaGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGGCCCGCTTCA +
Preference number: 5 (lower is better)
Translates to: LSWGSLLSISVPFEC*EVQWKLAGRCGPAS
Trigger: TGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGAACCCCAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000450716.5
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
CDS CCA 90 bp TCTCCATTTCGGTCCCTTTCGAGTGCTGGGAAGTTCAATGGAAGTTaGCCGGAAGATGTGGGCCCGCTTCAGATTCCCAAATCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SPFRSLSSAGKFNGS*PEDVGPLQIPKSGK
Trigger: CTTCCCAGATTTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000430714.5
ENST00000445105.7
ENST00000450716.5
ENST00000491636.1
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CCA 90 bp GCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTGGGAAGTTCAATaGAAGTTGGCCGGAAGATGTGGGCCCGCTTCAGATTCCCAAATC +
Preference number: 5 (lower is better)
Translates to: ALLSISVPFECWEVQ*KLAGRCGPASDSQI
Trigger: GATTTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430714.5
ENST00000684282.1
CDS CCA 90 bp CCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTGGGAAGTTCAATaGAAGTTGGCCGGAAGATGTGGGCCCGCTTCAGATTCCCAAATC +
Preference number: 5 (lower is better)
Translates to: PLLSISVPFECWEVQ*KLAGRCGPASDSQI
Trigger: GATTTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491636.1
ENST00000684728.1
CDS CCA 90 bp GACAACCACATACCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTaGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGGCCCGCTTCA +
Preference number: 5 (lower is better)
Translates to: DNHIPLLSISVPFEC*EVQWKLAGRCGPAS
Trigger: TGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGTATGTGGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS CCA 90 bp CCCTTTCGAGTGCTGGGAAGTTCAATGGAAGTTGGCCGGAAGATGTaGGCCCGCTTCAGATTCCCAAATCTGGGAAGCCAATCTGATGAT +
Preference number: 5 (lower is better)
Translates to: PFRVLGSSMEVGRKM*ARFRFPNLGSQSDD
Trigger: ATCATCAGATTGGCTTCCCAGATTTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000430714.5
ENST00000445105.7
ENST00000450716.5
ENST00000491636.1
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CCA 90 bp TCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTGGGAAGTTCAATaGAAGTTGGCCGGAAGATGTGGGCCCGCTTCAGATTCCCAAATC +
Preference number: 5 (lower is better)
Translates to: SLLSISVPFECWEVQ*KLAGRCGPASDSQI
Trigger: GATTTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000450716.5
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
CDS CCA 90 bp GATTTCGCCCGTACTTCCTTCCTTCCCCTCAGGCTTCCTGAAAGATaGGATTTCTTAAACCTTGAAGCTGGGTCTGGAAGCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: DFARTSFLPLRLPER*DFLNLEAGSGSCRQ
Trigger: CTGCCTGCAGCTTCCAGACCCAGCTTCAAGGTTTAAGAAATCCCATCTTTCAGGAAGCCTGAGGGGAAGGAAGGAAGTACGGGCGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683451.1
CDS-3UTR CAA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATGGGCTGGAGCGGCGCTaGGAGGCCGACACTCGGTCG +
Preference number: 5 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNGLERR*EADTRS
Trigger: CGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCC...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CAA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTCAAGACGTGCCTCTGTaGGAGAGGCGCAAGCGTTGT +
Preference number: 5 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIQDVPL*ERRKRC
Trigger: ACAACGCTTGCGCCTCTCCAACAGAGGCACGTCTTG...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 90 bp GGTACCAAGTGGAAGGGGAAGAACGATGCCCAAAATAACAAGACGTaGCTCTGTTGGAGAGGCGCAAGCGTTGTAAGGTGTCCAAAGTAT +
Preference number: 5 (lower is better)
Translates to: GTKWKGKNDAQNNKT*LCWRGASVVRCPKY
Trigger: ATACTTTGGACACCTTACAACGCTTGCGCCTCTCCAACAGAGGCACGTCTTGTTATTTTGGGCATCGTTCTTCCCCTTCCACTTGGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CAA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTGCTAGCCTTCACTCCTaGGATGGCCACTACACGCAG +
Preference number: 5 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGASLHS*DGHYTQ
Trigger: CTGCGTGTAGTGGCCATCCAAGGAGTGAAGGCTAGC...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTGACACTCGGTCGCTGTaGGACTCCCTCGCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFDTRSL*DSLACR
Trigger: GCGGCAGGCGAGGGAGTCCAACAGCGACCGAGTGTC...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 90 bp GATTTCGCCCGTACTTCCTTCCTTCCCCTCAGGCTTCCTGAAAGATaGGATTTCTTAAACCTTGAAGCTGCAATCAGCCACCAAAGGACA +
Preference number: 5 (lower is better)
Translates to: DFARTSFLPLRLPER*DFLNLEAAISHQRT
Trigger: TGTCCTTTGGTGGCTGATTGCAGCTTCAAGGTTTAAGAAATCCCATCTTTCAGGAAGCCTGAGGGGAAGGAAGGAAGTACGGGCGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418610.1
CDS CCA 90 bp TGGAAGGGGAAGAACGATGCCCAAAATAACAAGACGTGCCTCTGTTaGAGAGGCGCAAGCGTTGTAAGGTGTCCAAAGTATACCTACACA +
Preference number: 5 (lower is better)
Translates to: WKGKNDAQNNKTCLC*RGASVVRCPKYTYT
Trigger: TGTGTAGGTATACTTTGGACACCTTACAACGCTTGCGCCTCTCCAACAGAGGCACGTCTTGTTATTTTGGGCATCGTTCTTCCCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CAA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTGAAGTTCAATGGAAGTaGGCCGGAAGATGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGEVQWK*AGRCGP
Trigger: GGGCCCACATCTTCCGGCCAACTTCCATTGAACTTC...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTTTGCGAAGTAGACGTTaGCACCCCAAACTTGCACCC +
Preference number: 5 (lower is better)
Translates to: FLLLSAAHTILSVGVIAALRSRR*HPKLAP
Trigger: GGGTGCAAGTTTGGGGTGCAAACGTCTACTTCGCAA...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CAA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAACTTGTCACAATCCCTTaGAGCTGGGGTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQLVTIP*SWGSGL
Trigger: GAGACCAGAACCCCAGCTCAAAGGGATTGTGACAAG...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CAA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTCTTGTCACAATCCCTTaGAGCTGGGGTTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: FLLLSAAHTILSVGVIAALVTIP*SWGSLL
Trigger: GAGCAAAGAACCCCAGCTCAAAGGGATTGTGACAAG...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp GAAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATGAGAGAGGGAAGAAGGTGCAACAAGCAAGCTTaGGTTCAATTTTCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: EMGKWEGREGEGMREGRRCNKQA*VQFSCP
Trigger: AGGACAAGAAAATTGAACCAAAGCTTGCTTGTTGCA...CCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTCGGTCCCAGGCCCTCTaGCGAAGTAGACGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFRSQAL*RSRRLH
Trigger: GTGCAAACGTCTACTTCGCAAGAGGGCCTGGGACCG...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CAA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATCTGCAGAAGCGCACTTaGCTGAACACCCCGAGGACG +
Preference number: 5 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNLQKRT*LNTPRT
Trigger: CGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAG...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS-3UTR CAA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATGCTAGCCTTCACTCCTaGGATGGCCACTACACGCAG +
Preference number: 5 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNASLHS*DGHYTQ
Trigger: CTGCGTGTAGTGGCCATCCAAGGAGTGAAGGCTAGC...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTACACTGAGTTCTTTTTaGCTCCTTTCAGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSITLSSF*LLSAAH
Trigger: GTGAGCAGCTGAAAGGAGCAAAAAAGAACTCAGTGT...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS TCA 90 bp AAAGATGAAGTTTGGAACTCTTGGCAAGAGCTGGCCTTGATCCACTaGGTTTCCTTGCCTTATCTCTCCTGTTCAACTCAATTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: KDEVWNSWQELALIH*VSLPYLSCSTQFQW
Trigger: CCACTGAAATTGAGTTGAACAGGAGAGATAAGGCAAGGAAACTCAGTGGATCAAGGCCAGCTCTTGCCAAGAGTTCCAAACTTCATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS GCA 90 bp AGAAGGGGAGAGTTCTCAGCTATGTTGAATCTTGATTCACAACTTTaGCTCCATTCATGGTTGGTGTTCCAGAACTTTTCCTTGAACGCC +
Preference number: 5 (lower is better)
Translates to: RRGEFSAMLNLDSQL*LHSWLVFQNFSLNA
Trigger: GGCGTTCAAGGAAAAGTTCTGGAACACCAACCATGAATGGAGGCAAAGTTGTGAATCAAGATTCAACATAGCTGAGAACTCTCCCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000430714.5
ENST00000440901.4
ENST00000445105.7
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS-3UTR CAA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTAAATGTGATGAGGGCTaGGTTTTCTTCACTCTGTTC +
Preference number: 5 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAKCDEG*VFFTLF
Trigger: GAACAGAGTGAAGAAAACCAAGCCCTCATCACATTT...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAATGTGATGAGGGCTaGGTTTTCTTCACTCTGTTC +
Preference number: 5 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQKCDEG*VFFTLF
Trigger: GAACAGAGTGAAGAAAACCAAGCCCTCATCACATTT...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAATTCCAGAACTTTTCCTaGAACGCCCTTGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQFQNFS*NALVFL
Trigger: GAGAAAAACAAGGGCGTTCAAGGAAAAGTTCTGGAA...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTTTTATTTTCCTCTCCTaGGGTGGATTTACTGGAAGG +
Preference number: 5 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAFIFLS*GGFTGR
Trigger: CCTTCCAGTAAATCCACCCAAGGAGAGGAAAATAAA...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTGTGAGGGAAACTATATaGACCTTGAAATACGGCAAC +
Preference number: 5 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIVRETI*TLKYGN
Trigger: GTTGCCGTATTTCAAGGTCAATATAGTTTCCCTCAC...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS GCA 90 bp GTTGAACATTCTGCTGCCAAGGAATTCATCAAGGCCATAGAAATATaGAGCTCAGGTACAAAGATGAAGTTTGGAACTCTTGGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: VEHSAAKEFIKAIEI*SSGTKMKFGTLGKS
Trigger: GCTCTTGCCAAGAGTTCCAAACTTCATCTTTGTACCTGAGCTGCATATTTCTATGGCCTTGATGAATTCCTTGGCAGCAGAATGTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS-3UTR CAA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTTGAGCTGGGGTTCTTaGCTCTCCATTTCGGTCCCT +
Preference number: 5 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFLSWGS*LSISVP
Trigger: AGGGACCGAAATGGAGAGCAAAGAACCCCAGCTCAA...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTGTTCCCCTTCATAATTaGACCTTCTTTATTGAGTCC +
Preference number: 5 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIVPLHN*TFFIES
Trigger: GGACTCAATAAAGAAGGTCAAATTATGAAGGGGAAC...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTTTCCAGAACTTTTCCTaGAACGCCCTTGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGFQNFS*NALVFL
Trigger: GAGAAAAACAAGGGCGTTCAAGGAAAAGTTCTGGAA...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTCCACTAGGTCTTGCGTaGTCATTTTATTTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGPLGLA*SFYFPL
Trigger: GAGAGGAAAATAAAATGACAACGCAAGACCTAGTGG...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp GCCAAAACGATTACTATGAGAATAGGATGGCTTGCTGCCCTCCAATTTGCGGAATGCAACAAGCAAGCTTaGGTTCAATTTTCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: AKTITMRIGWLAALQFAECNKQA*VQFSCP
Trigger: AGGACAAGAAAATTGAACCAAAGCTTGCTTGTTGCA...TTCCGCAAATTGGAGGGCAGCAAGCCATCCTATTCTCATAGTAATCGTTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTGAATTTTCTACCACATaGCAACAAGCAAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIEFSTT*QQASFG
Trigger: ACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTC...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp AAATCAGACCAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGACACTGAGTTCTTTTTaGCTCCTTTCAGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: KSDQMLRASNLYLTTWTWTLSSF*LLSAAH
Trigger: GTGAGCAGCTGAAAGGAGCAAAAAAGAACTCAGTGT...CCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTGGTCTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTTTTAGGGAGTCATATTaGGAACAATACATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIFRESY*EQYMLD
Trigger: GTCCAGCATGTATTGTTCCAAATATGACTCCCTAAA...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS GCA 90 bp GGTTCTCAAATTCCTGCACACGTATTGCCGTGCAGCTTGGAAAGATaGATACAGCTTTTACCCATGACTAATCATCACATTTTACCACTT +
Preference number: 5 (lower is better)
Translates to: GSQIPAHVLPCSLER*IQLLPMTNHHILPL
Trigger: AAGTGGTAAAATGTGATGATTAGTCATGGGTAAAAGCTGTATGCATCTTTCCAAGCTGCACGGCAATACGTGTGCAGGAATTTGAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS-3UTR CAA 90 bp GTTGAATCAAGAGTGACAAGAAGAAATACAGCTAGAGTTATATTTTTGCCCCAGTCGCTGTTTTCGTCCTaGGTCCCATCAATGGTACCA +
Preference number: 5 (lower is better)
Translates to: VESRVTRRNTARVIFLPQSLFSS*VPSMVP
Trigger: TGGTACCATTGATGGGACCAAGGACGAAAACAGCGA...CTGGGGCAAAAATATAACTCTAGCTGTATTTCTTCTTGTCACTCTTGATTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCGCTGTTTTCGTCCTaGGTCCCATCAATGGTACCA +
Preference number: 5 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFSLFSS*VPSMVP
Trigger: TGGTACCATTGATGGGACCAAGGACGAAAACAGCGA...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp CAAATGCTAAGAGCAAGTAACTTATACCTCACCACCTGGACATGGCACTGGCAAGAGTTCTCAGCTATGTaGAATCTTGATTCACAACTT +
Preference number: 5 (lower is better)
Translates to: QMLRASNLYLTTWTWHWQEFSAM*NLDSQL
Trigger: AAGTTGTGAATCAAGATTCAACATAGCTGAGAACTC...TTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTACTTGCTCTTAGCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp GTAACTTATACCTCACCACCTGGACATGGCACTGGCAAAAGTCACTTCAGCATTCAAATGCAATTTGCGTaGACTAATTTCCTAGGACTT +
Preference number: 5 (lower is better)
Translates to: VTYTSPPGHGTGKSHFSIQMQFA*TNFLGL
Trigger: AAGTCCTAGGAAATTAGTCAACGCAAATTGCATTTG...AATGCTGAAGTGACTTTTGCCAGTGCCATGTCCAGGTGGTGAGGTATAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATTTGCTGCCCTCCAATTaGCGGAAGCACAAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNLLPSN*RKHKSL
Trigger: GAGACTTTTGTGCTTCCGCAAATTGGAGGGCAGCAA...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp TTTTTGCTCCTTTCAGCTGCTCACACAATCCTGTCTGTTGGAGTCATAGCTGCTGTCACTGTCTTTAAATaGTACTTGGAGCAAAGACAA +
Preference number: 5 (lower is better)
Translates to: FLLLSAAHTILSVGVIAAVTVFK*YLEQRQ
Trigger: TTGTCTTTGCTCCAAGTACAATTTAAAGACAGTGAC...AGCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS CCA 90 bp TTCTCAGCTATGTTGAATCTTGATTCACAACTTTGCCTCCATTCATaGTTGGTGTTCCAGAACTTTTCCTTGAACGCCCTTGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: FSAMLNLDSQLCLHS*LVFQNFSLNALVFL
Trigger: GAGAAAAACAAGGGCGTTCAAGGAAAAGTTCTGGAACACCAACCATGAATGGAGGCAAAGTTGTGAATCAAGATTCAACATAGCTGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000430714.5
ENST00000440901.4
ENST00000445105.7
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS-3UTR CAA 90 bp CATGGCACTGGCAAAAGTCACTTCAGCATTAGAACAGTAATGTTTTTGCTAAATTGCCTCCATTCATGGTaGGTGTTCCAGAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: HGTGKSHFSIRTVMFLLNCLHSW*VFQNFS
Trigger: GGAAAAGTTCTGGAACACCAACCATGAATGGAGGCA...ATTTAGCAAAAACATTACTGTTCTAATGCTGAAGTGACTTTTGCCAGTGCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGTCCACACCTGAGACATaGCTTTGTGGATACTCTCAA +
Preference number: 5 (lower is better)
Translates to: AREFSTTLQQASFGSIFLSTPET*LCGYSQ
Trigger: TTGAGAGTATCCACAAAGCAATGTCTCAGGTGTGGA...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp GCAAGGCCTTGTAGACTAAGGTATGAGGGTGAAATCGATTTGCTATTTCTGGGTTACTGCAGTGAACATTaGCTTAACATAATACGGAGA +
Preference number: 5 (lower is better)
Translates to: ARPCRLRYEGEIDLLFLGYCSEH*LNIIRR
Trigger: TCTCCGTATTATGTTAAGCAAATGTTCACTGCAGTA...ACCCAGAAATAGCAAATCGATTTCACCCTCATACCTTAGTCTACAAGGCCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS TCA 90 bp AGTGGTTTTGCAATCACTTCAAGTTGGAGGCTTTTAGTGATTGAGTaGTCACTTCAAGTTGAAGACTCTCCCTGGGAAATGATAATGTTG +
Preference number: 5 (lower is better)
Translates to: SGFAITSSWRLLVIE*SLQVEDSPWEMIML
Trigger: CAACATTATCATTTCCCAGGGAGAGTCTTCAACTTGAAGTGATCACTCAATCACTAAAAGCCTCCAACTTGAAGTGATTGCAAAACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS TCA 90 bp ACTAATCATCACATTTTACCACTTCAAACACAGGGGACAGATCCGTaGGAAGGCACAGTTGTTTATCAAACCGTTGAAGTGATAACACAA +
Preference number: 5 (lower is better)
Translates to: TNHHILPLQTQGTDP*EGTVVYQTVEVITQ
Trigger: TTGTGTTATCACTTCAACGGTTTGATAAACAACTGTGCCTTCTCACGGATCTGTCCCCTGTGTTTGAAGTGGTAAAATGTGATGATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS-3UTR CAA 90 bp AGCACAAAAGTCTCTGAATTAGCAAATGGAACTTCAGCTCCATTTGTTTCTATATGCCTCCATTCATGGTaGGTGTTCCAGAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: STKVSELANGTSAPFVSICLHSW*VFQNFS
Trigger: GGAAAAGTTCTGGAACACCAACCATGAATGGAGGCA...TATAGAAACAAATGGAGCTGAAGTTCCATTTGCTAATTCAGAGACTTTTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS CCA 90 bp CTGATAATTCATTTCTGGAGACAAAAGTACAAACTCAACCTAAGGTaGGAGAGAGGTACAAGCAGAAAGCTATGGAAGAATAAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LIIHFWRQKYKLNLR*ERGTSRKLWKNKER
Trigger: CCTTTCTTTATTCTTCCATAGCTTTCTGCTTGTACCTCTCTCCCACCTTAGGTTGAGTTTGTACTTTTGTCTCCAGAAATGAATTATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS-3UTR CAA 90 bp GCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTTCTTGTATCTGCGTAGCCAATaGCAAAGCATTACTAAAAGC +
Preference number: 5 (lower is better)
Translates to: AREFSTTLQQASFGSIFLYLRSQ*QSITKS
Trigger: GCTTTTAGTAATGCTTTGCAATTGGCTACGCAGATA...CAAGAAAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACGAGGGTGAAATCGATTaGCTATTTCTGGGTCTATGT +
Preference number: 5 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNEGEID*LFLGLC
Trigger: ACATAGACCCAGAAATAGCAAATCGATTTCACCCTC...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS-3UTR CAA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACGTTCCCCTTCATAATTaGACCTTCTTTATTGAGTCC +
Preference number: 5 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNVPLHN*TFFIES
Trigger: GGACTCAATAAAGAAGGTCAAATTATGAAGGGGAAC...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTGAATTTTCTACCACATaGCAACAAGCAAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFEFSTT*QQASFG
Trigger: ACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTC...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp TTTGTGCACGTGAATTTTCTACCACATTGCAACAAGCAAGCTTTGGTTCAATTTGAGTTCTCAGCTATGTaGAATCTTGATTCACAACTT +
Preference number: 5 (lower is better)
Translates to: FVHVNFLPHCNKQALVQFEFSAM*NLDSQL
Trigger: AAGTTGTGAATCAAGATTCAACATAGCTGAGAACTC...AAATTGAACCAAAGCTTGCTTGTTGCAATGTGGTAGAAAATTCACGTGCACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445105.7
ENST00000454309.6
CDS-3UTR CAA 90 bp TTGCTTTTAAGTGTGCTAATCTTTGTGCACGTGAATTTTCTACCACATTGCAACATTGATATCTCTTTATaGCGCCAATCCATAATGGCT +
Preference number: 5 (lower is better)
Translates to: LLLSVLIFVHVNFLPHCNIDISL*RQSIMA
Trigger: AGCCATTATGGATTGGCGCAATAAAGAGATATCAAT...GTTGCAATGTGGTAGAAAATTCACGTGCACAAAGATTAGCACACTTAAAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445105.7
CDS GCA 72 bp GGCCTCAGGCCCCAGCCTCTACTGCGCCCTCCGGCTTaGGCTCCGCCGGGGCGAGGGCAGGACCTGGGCGGC +
Preference number: 6 (lower is better)
Translates to: GLRPQPLLRPPA*APPGRGQDLGG
Trigger: GCCGCCCAGGTCCTGCCCTCGCCCCGGCGGAGCGCAAGCCGGAGGGCGCAGTAGAGGCTGGGGCCTGAGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 72 bp AGCTGCTCAGCGAGGGCCTCAGGCCCCAGCCTCTACTaGGCCCTCCGGCTTGCGCTCCGCCGGGGCGAGGGC +
Preference number: 6 (lower is better)
Translates to: SCSARASGPSLY*ALRLALRRGEG
Trigger: GCCCTCGCCCCGGCGGAGCGCAAGCCGGAGGGCGCAGTAGAGGCTGGGGCCTGAGGCCCTCGCTGAGCAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CAA 90 bp CTCTCGCACAGGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGGCGCTaGGAGGCCGACACTCGGTCGCTGTTGGACTCCCTCGCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: LSHRERPSLLGLERR*EADTRSLLDSLACR
Trigger: GCGGCAGGCGAGGGAGTCCAACAGCGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGCGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 72 bp CGAGGACGTGCCTCTCGCACAGGGAGCGCCCGTCTTTaGTGGGGCTGGAGCGGCGCTTGGAGGCCGACACTC +
Preference number: 6 (lower is better)
Translates to: RGRASRTGSARL*WGWSGAWRPTL
Trigger: GAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGCGAGAGGCACGTCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 72 bp GGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGGCGCTTaGAGGCCGACACTCGGTCGCTGTTGGACTCCCTCG +
Preference number: 6 (lower is better)
Translates to: GSARLCWGWSGA*RPTLGRCWTPS
Trigger: CGAGGGAGTCCAACAGCGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 72 bp GCCTCTCGCACAGGGAGCGCCCGTCTTTGCTGGGGCTaGAGCGGCGCTTGGAGGCCGACACTCGGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: ASRTGSARLCWG*SGAWRPTLGRC
Trigger: ACAGCGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGCGAGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 72 bp GGACGTGCCTCTCGCACAGGGAGCGCCCGTCTTTGCTaGGGCTGGAGCGGCGCTTGGAGGCCGACACTCGGT +
Preference number: 6 (lower is better)
Translates to: GRASRTGSARLC*GWSGAWRPTLG
Trigger: ACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGCGAGAGGCACGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CAA 90 bp GGTCTCCGCCTCACCGGCCTCTTGCGGCCGCTGCAGAAGCGCACTTaGCTGAACACCCCGAGGACGTGCCTCTCGCACAGGGAGCGCCCG +
Preference number: 6 (lower is better)
Translates to: GLRLTGLLRPLQKRT*LNTPRTCLSHRERP
Trigger: CGGGCGCTCCCTGTGCGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAGCGGCCGCAAGAGGCCGGTGAGGCGGAGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CAA 72 bp AGGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGGCGCTaGGAGGCCGACACTCGGTCGCTGTTGGACTCCCTC +
Preference number: 6 (lower is better)
Translates to: RERPSLLGLERR*EADTRSLLDSL
Trigger: GAGGGAGTCCAACAGCGACCGAGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS TCA 72 bp CCGGCCTCTTGCGGCCGCTGCAGAAGCGCACTTTGCTaGACACCCCGAGGACGTGCCTCTCGCACAGGGAGC +
Preference number: 6 (lower is better)
Translates to: PASCGRCRSALC*TPRGRASRTGS
Trigger: GCTCCCTGTGCGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAGCGGCCGCAAGAGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 72 bp GGCCACCCGAGTTCTGGAATTCCGAGAGGCGCGAAGTaGGAGCGGTTACCCGGAGTCTGGGTAGGGGCGCGG +
Preference number: 6 (lower is better)
Translates to: GHPSSGIPRGAK*ERLPGVWVGAR
Trigger: CCGCGCCCCTACCCAGACTCCGGGTAACCGCTCCCACTTCGCGCCTCTCGGAATTCCAGAACTCGGGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CCA 72 bp CGGCTGCGGCTTTCCAGGGGCCGGCCACCCGAGTTCTaGAATTCCGAGAGGCGCGAAGTGGGAGCGGTTACC +
Preference number: 6 (lower is better)
Translates to: RLRLSRGRPPEF*NSERREVGAVT
Trigger: GGTAACCGCTCCCACTTCGCGCCTCTCGGAATTCCAGAACTCGGGTGGCCGGCCCCTGGAAAGCCGCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 72 bp CAGCAGGGTGAGGTCTACAGAATGCATCGCGCCGGCTaGGGCTTTCCAGGGGCCGGCCACCCGAGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: QQGEVYRMHRAG*GFPGAGHPSSG
Trigger: TCCAGAACTCGGGTGGCCGGCCCCTGGAAAGCCGCAGCCGGCGCGATGCATTCTGTAGACCTCACCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 72 bp GAGGCCGACACTCGGTCGCTGTTGGACTCCCTCGCCTaGCGCTTCTGCCGGATCAAGGAGCTGGCTATCGCC +
Preference number: 6 (lower is better)
Translates to: EADTRSLLDSLA*RFCRIKELAIA
Trigger: GGCGATAGCCAGCTCCTTGATCCGGCAGAAGCGGCAGGCGAGGGAGTCCAACAGCGACCGAGTGTCGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CAA 72 bp CTCACCGGCCTCTTGCGGCCGCTGCAGAAGCGCACTTaGCTGAACACCCCGAGGACGTGCCTCTCGCACAGG +
Preference number: 6 (lower is better)
Translates to: LTGLLRPLQKRT*LNTPRTCLSHR
Trigger: CCTGTGCGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAGCGGCCGCAAGAGGCCGGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CAA 72 bp CTCGCTCCCCAAGCACTGCAGTCCCCTCGCCGAGGATaGCCTTGGCCACACGCACATGCAGCGGGAAGTCCC +
Preference number: 6 (lower is better)
Translates to: LAPQALQSPRRG*PWPHAHAAGSP
Trigger: GGGACTTCCCGCTGCATGTGCGTGTGGCCAAGGCAATCCTCGGCGAGGGGACTGCAGTGCTTGGGGAGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS GCA 72 bp CTGCAGAAGCGCACTTTGCTGAACACCCCGAGGACGTaGCTCTCGCACAGGGAGCGCCCGTCTTTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LQKRTLLNTPRT*LSHRERPSLLG
Trigger: CCCCAGCAAAGACGGGCGCTCCCTGTGCGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CAA 72 bp TTGAGCTGGGGTTCTGGTCTCCGCCTCACCGGCCTCTaGCGGCCGCTGCAGAAGCGCACTTTGCTGAACACC +
Preference number: 6 (lower is better)
Translates to: LSWGSGLRLTGL*RPLQKRTLLNT
Trigger: GGTGTTCAGCAAAGTGCGCTTCTGCAGCGGCCGCAAGAGGCCGGTGAGGCGGAGACCAGAACCCCAGCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 72 bp GTCCCCTCGCCGAGGATTGCCTTGGCCACACGCACATaGAGCGGGAAGTCCCCCGATAGGGACAACCACATA +
Preference number: 6 (lower is better)
Translates to: VPSPRIALATRT*SGKSPDRDNHI
Trigger: TATGTGGTTGTCCCTATCGGGGGACTTCCCGCTGCATGTGCGTGTGGCCAAGGCAATCCTCGGCGAGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS TCA 72 bp GCGGTTCTGAAGATTAGGAGGTCCGTCCCAGCAGGGTaGGGTCTACAGAATGCATCGCGCCGGCTGCGGCTT +
Preference number: 6 (lower is better)
Translates to: AVLKIRRSVPAG*GLQNASRRLRL
Trigger: AAGCCGCAGCCGGCGCGATGCATTCTGTAGACCTCACCCTGCTGGGACGGACCTCCTAATCTTCAGAACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS TCA 72 bp GAAGGCAGCAATTTAACTCCCTGCGGCCCGCGGTTCTaGAGATTAGGAGGTCCGTCCCAGCAGGGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: EGSNLTPCGPRF*RLGGPSQQGEV
Trigger: GACCTCACCCTGCTGGGACGGACCTCCTAATCTTCAGAACCGCGGGCCGCAGGGAGTTAAATTGCTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 72 bp GCGGGAAGTCCCCCGATAGGGACAACCACATACCTTTaGTCTCCATTTCGGTCCCTTTCGAGTGCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: AGSPPIGTTTYL*SPFRSLSSAGK
Trigger: CTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGTATGTGGTTGTCCCTATCGGGGGACTTCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS CAA 72 bp TATCCCTGCTGGCTGAATAACCTTGTCACAATCCCTTaGAGCTGGGGTTCTGGTCTCCGCCTCACCGGCCTC +
Preference number: 6 (lower is better)
Translates to: YPCWLNNLVTIP*SWGSGLRLTGL
Trigger: GAGGCCGGTGAGGCGGAGACCAGAACCCCAGCTCAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CAA 90 bp CGCACATGCAGCGGGAAGTCCCCCGATAGGGACAACCACATACCTTaGCTCTCCATTTCGGTCCCTTTCGAGTGCTGGGAAGTTCAATGG +
Preference number: 6 (lower is better)
Translates to: RTCSGKSPDRDNHIP*LSISVPFECWEVQW
Trigger: CCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGTATGTGGTTGTCCCTATCGGGGGACTTCCCGCTGCATGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS TCA 72 bp AATGGACATAGCATCTCCTCCTCTATCGACCTAGTATaGTGCTCGCTCCCCAAGCACTGCAGTCCCCTCGCC +
Preference number: 6 (lower is better)
Translates to: NGHSISSSIDLV*CSLPKHCSPLA
Trigger: GGCGAGGGGACTGCAGTGCTTGGGGAGCGAGCATCATACTAGGTCGATAGAGGAGGAGATGCTATGTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS CCA 72 bp CGGTCCCTTTCGAGTGCTGGGAAGTTCAATGGAAGTTaGCCGGAAGATGTGGGCCCGCTTCAGATTCCCAAA +
Preference number: 6 (lower is better)
Translates to: RSLSSAGKFNGS*PEDVGPLQIPK
Trigger: TTTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000430714.5
ENST00000445105.7
ENST00000450716.5
ENST00000491636.1
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CAA 72 bp ATCAGCCACCAAAGGACACTTAGGAGCAGCAGCAGATaGCCTCTACAGGGGATACGTTGCGACGCGCATCTG +
Preference number: 6 (lower is better)
Translates to: ISHQRTLRSSSR*PLQGIRCDAHL
Trigger: CAGATGCGCGTCGCAACGTATCCCCTGTAGAGGCAATCTGCTGCTGCTCCTAAGTGTCCTTTGGTGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418610.1
CDS CAA 72 bp TCGGTCCCTTTCGAGTGCTGGGAAGTTCAATGGAAGTaGGCCGGAAGATGTGGGCCCGCTTCAGATTCCCAA +
Preference number: 6 (lower is better)
Translates to: SVPFECWEVQWK*AGRCGPASDSQ
Trigger: TTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000430714.5
ENST00000445105.7
ENST00000450716.5
ENST00000491636.1
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CAA 72 bp AGCGGGAAGTCCCCCGATAGGGACAACCACATACCTTaGCTCTCCATTTCGGTCCCTTTCGAGTGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: SGKSPDRDNHIP*LSISVPFECWE
Trigger: TTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGTATGTGGTTGTCCCTATCGGGGGACTTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS CCA 72 bp GCCGGAAGATGTGGGCCCGCTTCAGATTCCCAAATCTaGGAAGCCAATCTGATGATTTCGCCCGTACTTCCT +
Preference number: 6 (lower is better)
Translates to: AGRCGPASDSQI*EANLMISPVLP
Trigger: AGGAAGTACGGGCGAAATCATCAGATTGGCTTCCCAGATTTGGGAATCTGAAGCGGGCCCACATCTTCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000430714.5
ENST00000445105.7
ENST00000450716.5
ENST00000491636.1
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CCA 72 bp TCCATTTCGGTCCCTTTCGAGTGCTGGGAAGTTCAATaGAAGTTGGCCGGAAGATGTGGGCCCGCTTCAGAT +
Preference number: 6 (lower is better)
Translates to: SISVPFECWEVQ*KLAGRCGPASD
Trigger: ATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000430714.5
ENST00000445105.7
ENST00000450716.5
ENST00000491636.1
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CCA 72 bp CAGCCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTaGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGG +
Preference number: 6 (lower is better)
Translates to: QPLLSISVPFEC*EVQWKLAGRCG
Trigger: CCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684728.1
CDS CCA 72 bp GGTGCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTaGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGG +
Preference number: 6 (lower is better)
Translates to: GALLSISVPFEC*EVQWKLAGRCG
Trigger: CCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS CAA 90 bp CTCTCCATTTCGGTCCCTTTCGAGTGCTGGGAAGTTCAATGGAAGTaGGCCGGAAGATGTGGGCCCGCTTCAGATTCCCAAATCTGGGAA +
Preference number: 6 (lower is better)
Translates to: LSISVPFECWEVQWK*AGRCGPASDSQIWE
Trigger: TTCCCAGATTTGGGAATCTGAAGCGGGCCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000430714.5
ENST00000445105.7
ENST00000450716.5
ENST00000491636.1
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS GCA 72 bp AGGAGCAGCAGCAGATTGCCTCTACAGGGGATACGTTaGGACGCGCATCTGATACTGAAATGCATGCACAGT +
Preference number: 6 (lower is better)
Translates to: RSSSRLPLQGIR*DAHLILKCMHS
Trigger: ACTGTGCATGCATTTCAGTATCAGATGCGCGTCGCAACGTATCCCCTGTAGAGGCAATCTGCTGCTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418610.1
CDS CCA 72 bp GGTTCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTaGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGG +
Preference number: 6 (lower is better)
Translates to: GSLLSISVPFEC*EVQWKLAGRCG
Trigger: CCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000450716.5
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
CDS CCA 72 bp AGAGCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTaGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGG +
Preference number: 6 (lower is better)
Translates to: RALLSISVPFEC*EVQWKLAGRCG
Trigger: CCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430714.5
CDS CAA 72 bp TATCCCTGCTGGCTGAATAACCTTGTCACAATCCCTTaGAGCTGGGGTTCTGTAGTCCCAGCTGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: YPCWLNNLVTIP*SWGSVVPAAWE
Trigger: CTCCCAAGCAGCTGGGACTACAGAACCCCAGCTCAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684728.1
CDS CAA 90 bp GAAGCTGCAATCAGCCACCAAAGGACACTTAGGAGCAGCAGCAGATaGCCTCTACAGGGGATACGTTGCGACGCGCATCTGATACTGAAA +
Preference number: 6 (lower is better)
Translates to: EAAISHQRTLRSSSR*PLQGIRCDAHLILK
Trigger: TTTCAGTATCAGATGCGCGTCGCAACGTATCCCCTGTAGAGGCAATCTGCTGCTGCTCCTAAGTGTCCTTTGGTGGCTGATTGCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418610.1
CDS GCA 72 bp TGGGGTTCTTTGCTCTCCATTTCGGTCCCTTTCGAGTaGTGGGAAGTTCAATGGAAGTTGGCCGGAAGATGT +
Preference number: 6 (lower is better)
Translates to: WGSLLSISVPFE*WEVQWKLAGRC
Trigger: ACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000450716.5
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
CDS GCA 72 bp TGGAAGGGGAAGAACGATGCCCAAAATAACAAGACGTaGCTCTGTTGGAGAGGCGCAAGCGTTGTAAGGTGT +
Preference number: 6 (lower is better)
Translates to: WKGKNDAQNNKT*LCWRGASVVRC
Trigger: ACACCTTACAACGCTTGCGCCTCTCCAACAGAGGCACGTCTTGTTATTTTGGGCATCGTTCTTCCCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS GCA 72 bp AAAAGAAGTCGCCTTCCTGCCACACTTCCCCAGTGCTaGAATGGACATAGCATCTCCTCCTCTATCGACCTA +
Preference number: 6 (lower is better)
Translates to: KRSRLPATLPQC*NGHSISSSIDL
Trigger: TAGGTCGATAGAGGAGGAGATGCTATGTCCATTGCAGCACTGGGGAAGTGTGGCAGGAAGGCGACTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS GCA 72 bp TGTGGTGCTTTGCTCTCCATTTCGGTCCCTTTCGAGTaGTGGGAAGTTCAATGGAAGTTGGCCGGAAGATGT +
Preference number: 6 (lower is better)
Translates to: CGALLSISVPFE*WEVQWKLAGRC
Trigger: ACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS CCA 72 bp GTACCATCTGGGTGCATCTGCAGGAAGTATCCCTGCTaGCTGAATAACCTTGTCACAATCCCTTTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VPSGCICRKYPC*LNNLVTIPLSW
Trigger: CCAGCTCAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATACTTCCTGCAGATGCACCCAGATGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000448795.5
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CCA 72 bp GAGTGTAGTCGCTGTTTTCGTCCTTGGTCCCATCAATaGTACCATCTGGGTGCATCTGCAGGAAGTATCCCT +
Preference number: 6 (lower is better)
Translates to: ECSRCFRPWSHQ*YHLGASAGSIP
Trigger: AGGGATACTTCCTGCAGATGCACCCAGATGGTACCATTGATGGGACCAAGGACGAAAACAGCGACTACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000448795.5
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CCA 72 bp ATACCTTTGCTCTCCATTTCGGTCCCTTTCGAGTGCTaGGAAGTTCAATGGAAGTTGGCCGGAAGATGTGGG +
Preference number: 6 (lower is better)
Translates to: IPLLSISVPFEC*EVQWKLAGRCG
Trigger: CCCACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS CAA 72 bp CCTTCCCCTCAGGCTTCCTGCTATTCTCAAAAGCACTaGTGTCAACAGCTTATCAGGCTCTCAAGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: PSPQASCYSQKH*CQQLIRLSRLL
Trigger: CAGGAGCCTTGAGAGCCTGATAAGCTGTTGACACAAGTGCTTTTGAGAATAGCAGGAAGCCTGAGGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450716.5
CDS TCA 72 bp AAATGGGTAAATGGGAAGGAAGGGAAGGGGAAGGGATaGGAGAGGGAAGAAGGGGAGAGTTCTCAGCTATGT +
Preference number: 6 (lower is better)
Translates to: KWVNGKEGKGKG*EREEGESSQLC
Trigger: ACATAGCTGAGAACTCTCCCCTTCTTCCCTCTCTCATCCCTTCCCCTTCCCTTCCTTCCCATTTACCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000440901.4
ENST00000445105.7
ENST00000454309.6
ENST00000682572.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS GCA 72 bp ATGGTACCATCTGGGTGCATCTGCAGGAAGTATCCCTaGTGGCTGAATAACCTTGTCACAATCCCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: MVPSGCICRKYP*WLNNLVTIPLS
Trigger: GCTCAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATACTTCCTGCAGATGCACCCAGATGGTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000448795.5
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS GCA 72 bp CACATACCTTTGCTCTCCATTTCGGTCCCTTTCGAGTaGTGGGAAGTTCAATGGAAGTTGGCCGGAAGATGT +
Preference number: 6 (lower is better)
Translates to: HIPLLSISVPFE*WEVQWKLAGRC
Trigger: ACATCTTCCGGCCAACTTCCATTGAACTTCCCAGCACTCGAAAGGGACCGAAATGGAGAGCAAAGGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS GCA 72 bp TTAAAAAGAAGTCGCCTTCCTGCCACACTTCCCCAGTaGTGCAATGGACATAGCATCTCCTCCTCTATCGAC +
Preference number: 6 (lower is better)
Translates to: LKRSRLPATLPQ*CNGHSISSSID
Trigger: GTCGATAGAGGAGGAGATGCTATGTCCATTGCAGCACTGGGGAAGTGTGGCAGGAAGGCGACTTCTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491636.1
CDS CAA 72 bp TATCCCTGCTGGCTGAATAACCTTGTCACAATCCCTTaGAGCTGGGGTTCTTTGCTCTCCATTTCGGTCCCT +
Preference number: 6 (lower is better)
Translates to: YPCWLNNLVTIP*SWGSLLSISVP
Trigger: AGGGACCGAAATGGAGAGCAAAGAACCCCAGCTCAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000418610.1
ENST00000445105.7
ENST00000450716.5
ENST00000682572.1
ENST00000682819.1
ENST00000683451.1
ENST00000683935.1
CDS GCA 72 bp AGCTGGGGTTCTCAAATTCCTGCACACGTATTGCCGTaGAGCTTGGAAAGATGCATACAGCTTTTACCCATG +
Preference number: 6 (lower is better)
Translates to: SWGSQIPAHVLP*SLERCIQLLPM
Trigger: CATGGGTAAAAGCTGTATGCATCTTTCCAAGCTGCACGGCAATACGTGTGCAGGAATTTGAGAACCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS CCA 72 bp AAGAACGATGCCCAAAATAACAAGACGTGCCTCTGTTaGAGAGGCGCAAGCGTTGTAAGGTGTCCAAAGTAT +
Preference number: 6 (lower is better)
Translates to: KNDAQNNKTCLC*RGASVVRCPKY
Trigger: ATACTTTGGACACCTTACAACGCTTGCGCCTCTCCAACAGAGGCACGTCTTGTTATTTTGGGCATCGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454309.6
CDS CAA 72 bp CCTTTGAGCTGGGGTTCTCAAATTCCTGCACACGTATaGCCGTGCAGCTTGGAAAGATGCATACAGCTTTTA +
Preference number: 6 (lower is better)
Translates to: PLSWGSQIPAHV*PCSLERCIQLL
Trigger: TAAAAGCTGTATGCATCTTTCCAAGCTGCACGGCAATACGTGTGCAGGAATTTGAGAACCCCAGCTCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS CAA 90 bp TTGAGCTGGGGTTCTCAAATTCCTGCACACGTATTGCCGTGCAGCTaGGAAAGATGCATACAGCTTTTACCCATGACTAATCATCACATT +
Preference number: 6 (lower is better)
Translates to: LSWGSQIPAHVLPCS*ERCIQLLPMTNHHI
Trigger: AATGTGATGATTAGTCATGGGTAAAAGCTGTATGCATCTTTCCAAGCTGCACGGCAATACGTGTGCAGGAATTTGAGAACCCCAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS TCA 72 bp GGGAAGAAGGGGAGAGTTCTCAGCTATGTTGAATCTTaGTTCACAACTTTGCCTCCATTCATGGTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: GKKGRVLSYVES*FTTLPPFMVGV
Trigger: AACACCAACCATGAATGGAGGCAAAGTTGTGAATCAAGATTCAACATAGCTGAGAACTCTCCCCTTCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000440901.4
ENST00000445105.7
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CAA 72 bp GGTTCTCAAATTCCTGCACACGTATTGCCGTGCAGCTaGGAAAGATGCATACAGCTTTTACCCATGACTAAT +
Preference number: 6 (lower is better)
Translates to: GSQIPAHVLPCS*ERCIQLLPMTN
Trigger: ATTAGTCATGGGTAAAAGCTGTATGCATCTTTCCAAGCTGCACGGCAATACGTGTGCAGGAATTTGAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS CAA 90 bp TCACAACTTTGCCTCCATTCATGGTTGGTGTTCCAGAACTTTTCCTaGAACGCCCTTGTTTTTCTCCAATTTCATGTAGCGATGGTTCTC +
Preference number: 6 (lower is better)
Translates to: SQLCLHSWLVFQNFS*NALVFLQFHVAMVL
Trigger: GAGAACCATCGCTACATGAAATTGGAGAAAAACAAGGGCGTTCAAGGAAAAGTTCTGGAACACCAACCATGAATGGAGGCAAAGTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000430714.5
ENST00000440901.4
ENST00000445105.7
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS TCA 72 bp GGCAGACTACTTCTTCAGTTTCAACAGGAAACACAGTaGGGATTTCATGGTGGAGGTATACTGGGTCTTAAA +
Preference number: 6 (lower is better)
Translates to: GRLLLQFQQETQ*GFHGGGILGLK
Trigger: TTTAAGACCCAGTATACCTCCACCATGAAATCCTCACTGTGTTTCCTGTTGAAACTGAAGAAGTAGTCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS TCA 72 bp ACTCATTTACTCTTTGCTTATATTAGCAGGTTGTCTTaGGGAGCATTAGAAAGGGGCAACCACAAAGAGGCC +
Preference number: 6 (lower is better)
Translates to: THLLFAYISRLS*GALERGNHKEA
Trigger: GGCCTCTTTGTGGTTGCCCCTTTCTAATGCTCCTCAAGACAACCTGCTAATATAAGCAAAGAGTAAATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS TCA 72 bp GCAATCACTTCAAGTTGGAGGCTTTTAGTGATTGAGTaGTCACTTCAAGTTGAAGACTCTCCCTGGGAAATG +
Preference number: 6 (lower is better)
Translates to: AITSSWRLLVIE*SLQVEDSPWEM
Trigger: CATTTCCCAGGGAGAGTCTTCAACTTGAAGTGATCACTCAATCACTAAAAGCCTCCAACTTGAAGTGATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS GCA 72 bp GAGCACAACACAGCCATTAGTGGAAAGAAAGACTGCTaGTATGATTTAGACCATTCAGGGAAAACCAAAGCA +
Preference number: 6 (lower is better)
Translates to: EHNTAISGKKDC*YDLDHSGKTKA
Trigger: TGCTTTGGTTTTCCCTGAATGGTCTAAATCATAGCAGCAGTCTTTCTTTCCACTAATGGCTGTGTTGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS GCA 72 bp ATTCCTGCACACGTATTGCCGTGCAGCTTGGAAAGATaGATACAGCTTTTACCCATGACTAATCATCACATT +
Preference number: 6 (lower is better)
Translates to: IPAHVLPCSLER*IQLLPMTNHHI
Trigger: AATGTGATGATTAGTCATGGGTAAAAGCTGTATGCATCTTTCCAAGCTGCACGGCAATACGTGTGCAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS GCA 72 bp GAGTTCTCAGCTATGTTGAATCTTGATTCACAACTTTaGCTCCATTCATGGTTGGTGTTCCAGAACTTTTCC +
Preference number: 6 (lower is better)
Translates to: EFSAMLNLDSQL*LHSWLVFQNFS
Trigger: GGAAAAGTTCTGGAACACCAACCATGAATGGAGGCAAAGTTGTGAATCAAGATTCAACATAGCTGAGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000430714.5
ENST00000440901.4
ENST00000445105.7
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS GCA 72 bp GAAGAGCACAACACAGCCATTAGTGGAAAGAAAGACTaGTGCTATGATTTAGACCATTCAGGGAAAACCAAA +
Preference number: 6 (lower is better)
Translates to: EEHNTAISGKKD*CYDLDHSGKTK
Trigger: TTTGGTTTTCCCTGAATGGTCTAAATCATAGCAGCAGTCTTTCTTTCCACTAATGGCTGTGTTGTGCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS GCA 72 bp TCTGCTGCCAAGGAATTCATCAAGGCCATAGAAATATaGAGCTCAGGTACAAAGATGAAGTTTGGAACTCTT +
Preference number: 6 (lower is better)
Translates to: SAAKEFIKAIEI*SSGTKMKFGTL
Trigger: AAGAGTTCCAAACTTCATCTTTGTACCTGAGCTGCATATTTCTATGGCCTTGATGAATTCCTTGGCAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS CCA 72 bp CATTTCTGGAGACAAAAGTACAAACTCAACCTAAGGTaGGAGAGAGGTACAAGCAGAAAGCTATGGAAGAAT +
Preference number: 6 (lower is better)
Translates to: HFWRQKYKLNLR*ERGTSRKLWKN
Trigger: ATTCTTCCATAGCTTTCTGCTTGTACCTCTCTCCCACCTTAGGTTGAGTTTGTACTTTTGTCTCCAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS CAA 72 bp TTGAATCTTGATTCACAACTTTGCCTCCATTCATGGTaGGTGTTCCAGAACTTTTCCTTGAACGCCCTTGTT +
Preference number: 6 (lower is better)
Translates to: LNLDSQLCLHSW*VFQNFSLNALV
Trigger: AACAAGGGCGTTCAAGGAAAAGTTCTGGAACACCAACCATGAATGGAGGCAAAGTTGTGAATCAAGATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000430714.5
ENST00000440901.4
ENST00000445105.7
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CAA 72 bp GGATTCCACTCTGTTTCCACTACTTCTTCCACTTTTTaGGTCCATCACCAGAGTGTTAAAATGTTGTCTCAC +
Preference number: 6 (lower is better)
Translates to: GFHSVSTTSSTF*VHHQSVKMLSH
Trigger: GTGAGACAACATTTTAACACTCTGGTGATGGACCAAAAAAGTGGAAGAAGTAGTGGAAACAGAGTGGAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS CAA 72 bp TCCTTTAAACCACTGACCTACAGCAATCCATTTTACTaGACGGAGCATTGGGTAGGGGAAAGATTACAGATA +
Preference number: 6 (lower is better)
Translates to: SFKPLTYSNPFY*TEHWVGERLQI
Trigger: TATCTGTAATCTTTCCCCTACCCAATGCTCCGTCAAGTAAAATGGATTGCTGTAGGTCAGTGGTTTAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS CAA 90 bp TCAGCTATGTTGAATCTTGATTCACAACTTTGCCTCCATTCATGGTaGGTGTTCCAGAACTTTTCCTTGAACGCCCTTGTTTTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: SAMLNLDSQLCLHSW*VFQNFSLNALVFLQ
Trigger: TTGGAGAAAAACAAGGGCGTTCAAGGAAAAGTTCTGGAACACCAACCATGAATGGAGGCAAAGTTGTGAATCAAGATTCAACATAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000430714.5
ENST00000440901.4
ENST00000445105.7
ENST00000450716.5
ENST00000454309.6
ENST00000682572.1
ENST00000683451.1
ENST00000683935.1
ENST00000684282.1
ENST00000684728.1
CDS CAA 90 bp CTCTCCCTGGGAAATGATAATGTTGAACCAGTCCTTAATAGGAAATaGAGGATTAAAAGGGCAGTTTTTGTCCAGGAAATGAGCAAATCC +
Preference number: 6 (lower is better)
Translates to: LSLGNDNVEPVLNRK*RIKRAVFVQEMSKS
Trigger: GGATTTGCTCATTTCCTGGACAAAAACTGCCCTTTTAATCCTCAATTTCCTATTAAGGACTGGTTCAACATTATCATTTCCCAGGGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS CCA 72 bp GGTAAAGTATTTGTCGCAATGCCAAGAGCTACAACCTaGATTAACAGTCACACTTCACAAAATAGACTTCTA +
Preference number: 6 (lower is better)
Translates to: GKVFVAMPRATT*INSHTSQNRLL
Trigger: TAGAAGTCTATTTTGTGAAGTGTGACTGTTAATCCAGGTTGTAGCTCTTGGCATTGCGACAAATACTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS CAA 72 bp CAAAAGAGCACAAGAGTAGACTGTGTGGGCTTCGTTTaGTTCCCTTTATTGACCCATTTGCTTAAATTTTCA +
Preference number: 6 (lower is better)
Translates to: QKSTRVDCVGFV*FPLLTHLLKFS
Trigger: TGAAAATTTAAGCAAATGGGTCAATAAAGGGAACAAAACGAAGCCCACACAGTCTACTCTTGTGCTCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684282.1
CDS CAA 90 bp CAAATAAGGTCCTTTAAACCACTGACCTACAGCAATCCATTTTACTaGACGGAGCATTGGGTAGGGGAAAGATTACAGATAAGTTATTTT +
Preference number: 6 (lower is better)
Translates to: QIRSFKPLTYSNPFY*TEHWVGERLQISYF
Trigger: AAAATAACTTATCTGTAATCTTTCCCCTACCCAATGCTCCGTCAAGTAAAATGGATTGCTGTAGGTCAGTGGTTTAAAGGACCTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682819.1
CDS CAA 72 bp GGAAATGATAATGTTGAACCAGTCCTTAATAGGAAATaGAGGATTAAAAGGGCAGTTTTTGTCCAGGAAATG +
Preference number: 6 (lower is better)
Translates to: GNDNVEPVLNRK*RIKRAVFVQEM
Trigger: CATTTCCTGGACAAAAACTGCCCTTTTAATCCTCAATTTCCTATTAAGGACTGGTTCAACATTATCATTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684282.1