RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGF11 (Homo sapiens)

Ensembl gene IDs: ENSG00000161958

Ensembl transcript IDs: ENST00000293829.9, ENST00000572907.5, ENST00000575082.5, ENST00000575235.5, ENST00000575398.5, ENST00000576328.1, ENST00000638377.1, ENST00000638480.1, ENST00000638657.1, ENST00000639021.2, ENST00000640112.1, ENST00000640825.1

Found 719 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGCAGCAGGGGTGAGAGCAGGACTGGG +
Preference number: 1 (lower is better)
Translates to: QPLGSLRVEHLVGPG*SGHVCGSRGESRTG
Trigger: CCCAGTCCTGCTCTCACCCCTGCTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR CCA 90 bp GTGGCAGCAGGGGTGAGAGCAGGACTGGGAGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTA +
Preference number: 1 (lower is better)
Translates to: VAAGVRAGLGDRLWW*LAHWECREPPVQGL
Trigger: TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTGCTCTCACCCCTGCTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR CCA 90 bp TGTGTGGCAGCAGGGGTGAGAGCAGGACTGGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGA +
Preference number: 1 (lower is better)
Translates to: CVAAGVRAGLGDRLW*WLAHWECREPPVQG
Trigger: TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTGCTCTCACCCCTGCTGCCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR CCA 90 bp GGACTCCAGGAACTGGCTGAGCCGGGGTGGGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCA +
Preference number: 1 (lower is better)
Translates to: GLQELAEPGWEVFMP*LSMWELPAPSQEKA
Trigger: TGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGGCATAAACACTTCCCACCCCGGCTCAGCCAGTTCCTGGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR GCA 90 bp TCCCAGCTTCCCTACTATGAGCCAGGGATCCTTCCAAAATTCCTCTaGCCTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGT +
Preference number: 1 (lower is better)
Translates to: SQLPYYEPGILPKFL*PSPDSVSLARPQLG
Trigger: ACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAGGGCAGAGGAATTTTGGAAGGATCCCTGGCTCATAGTAGGGAAGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR TCA 90 bp TGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGAC +
Preference number: 1 (lower is better)
Translates to: CGNSQRHLRKRHGVV*VWKERSDQPGPSSD
Trigger: GTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR TCA 90 bp AGAATTGGGTGTCTCTGGGATAAGAAGGTTAAACCCGTGGTCATCTaGGACTGGTTCCGGTTCAGGCCAAAGCCAACAGCTAGACAAGGC +
Preference number: 1 (lower is better)
Translates to: RIGCLWDKKVKPVVI*DWFRFRPKPTARQG
Trigger: GCCTTGTCTAGCTGTTGGCTTTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCCAGAGACACCCAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CCA 90 bp AAAGCTCTAGAATTGGGTGTCTCTGGGATAAGAAGGTTAAACCCGTaGTCATCTGAGACTGGTTCCGGTTCAGGCCAAAGCCAACAGCTA +
Preference number: 1 (lower is better)
Translates to: KALELGVSGIRRLNP*SSETGSGSGQSQQL
Trigger: TAGCTGTTGGCTTTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCCAGAGACACCCAATTCTAGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCACTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: APRLPQGRAPSGTWLLRALGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR GCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR GCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SPGSSARSWVETEWGLCGGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 2 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR GCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR GCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 2 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 2 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 2 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGATGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 2 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCGTGCAGAAGTGGCCCTaGCGAGGGTGTCCAGTGTTC +
Preference number: 2 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSAVQKWP*RGCPVF
Trigger: GAACACTGGACACCCTCGCCAGGGCCACTTCTGCAC...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGTTGGGGTCTCCTCACTaGGAGGGTCAAGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: SPGSSARSWVETEWGLCGLGSPH*EGQGCI
Trigger: GATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAA...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCATGGCTCAGTGGCAATaGAAAGGGGCACAGGACTCC +
Preference number: 2 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSAMAQWQ*KGAQDS
Trigger: GGAGTCCTGTGCCCCTTTTCATTGCCACTGAGCCAT...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGATGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 2 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 2 (lower is better)
Translates to: VHVGTPSAISGKGMALCEWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: VGTPSAISGKGMALCECGDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGAGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 2 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGACCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCT +
Preference number: 2 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARPWLSM*ELPAPS
Trigger: AGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGG...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: VHVGTPSAISGKGMALCERHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCAACCAGGGGTCCATCTaGGTCAATGACAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPNQGSI*VNDRGL
Trigger: CAGGCCTCTGTCATTGACTCAGATGGACCCCTGGTT...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR GCA 90 bp ATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: MWELPAPSQEKAWRCVSVLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...CACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTTGGGGTCTCCTCACTaGGAGGGTCAAGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPLGSPH*EGQGCI
Trigger: GATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAA...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR GCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR GCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR GCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGAAAAAGGCTGGCAGCATaGCTGGGTTCCAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARKRLAA*LGSSTE
Trigger: CTCTGTGCTGGAACCCAGGCATGCTGCCAGCCTTTT...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR GCA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGCTTCCAAAATTCCTCTaGCCTTCTCCAGACTCTGTC +
Preference number: 2 (lower is better)
Translates to: SPGSSARSWVETEWGLCGLPKFL*PSPDSV
Trigger: GACAGAGTCTGGAGAAGGGCAGAGGAATTTTGGAAG...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR TCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSARHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCGGTGAGACTTATTGCTaGATTGGGGTCTCCTCACTG +
Preference number: 2 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPGETYC*IGVSSL
Trigger: CAGTGAGGAGACCCCAATTCAGCAATAAGTCTCACC...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: CECGKKEVISQDHLQTSPGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: TPSAISGKGMALCECGKKDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAAGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 2 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 2 (lower is better)
Translates to: TPSAISGKGMALCECGKKGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 2 (lower is better)
Translates to: TPSAISGKGMALCECGKKAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTC +
Preference number: 2 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPEVFMP*LSMWEL
Trigger: GAGTTCCCACATGGACAGCCAGGGCATAAACACTTC...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR GCA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGACTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: APSWVKGLRVMIYVLELGLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 2 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SGKGMALCECGKKEVISQGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGAACTTACTGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 2 (lower is better)
Translates to: SSVIGITQEGGRVGLELTAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...AGTAAGTTCTAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCCCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCT +
Preference number: 2 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGPWLSM*ELPAPS
Trigger: AGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGG...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR GCA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: SGKGMALCECGKKEVISQLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 2 (lower is better)
Translates to: SGKGMALCECGKKEVISQGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: SGKGMALCECGKKEVISQLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTCAGGACTCCAGGAACTaGCTGAGCCGGGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPQDSRN*LSRGGK
Trigger: CTTCCCACCCCGGCTCAGCCAGTTCCTGGAGTCCTG...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGAAGAAGGTTAAACCCGTaGTCATCTGAGACTGGTTCC +
Preference number: 2 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARRRLNP*SSETGS
Trigger: GGAACCAGTCTCAGATGACCACGGGTTTAACCTTCT...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CAA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTaGACCCCTCCCCCATCCCAGCTTCCCTACTATGAGCCAGGGATC +
Preference number: 2 (lower is better)
Translates to: FMSTQHRCRFSHAII*TPPPSQLPYYEPGI
Trigger: GATCCCTGGCTCATAGTAGGGAAGCTGGGATGGGGGAGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: SGKGMALCECGKKEVISQRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCATGGCTCAGTGGCAATaGAAAGGGGCACAGGACTCC +
Preference number: 2 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGMAQWQ*KGAQDS
Trigger: GGAGTCCTGTGCCCCTTTTCATTGCCACTGAGCCAT...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGAAACCAGGGGTCCATCTaGGTCAATGACAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: APSWVKGLRVMIYVLELGNQGSI*VNDRGL
Trigger: CAGGCCTCTGTCATTGACTCAGATGGACCCCTGGTT...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR GCA 90 bp TCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGAACTTACTAAAAGGCTGGCAGCATaGCTGGGTTCCAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: SSVIGITQEGGRVGLELTKRLAA*LGSSTE
Trigger: CTCTGTGCTGGAACCCAGGCATGCTGCCAGCCTTTT...AGTAAGTTCTAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 2 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAATCCAGAGAAAAGGCTaGCAGCATGCCTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLIQRKG*QHAWVP
Trigger: TGGAACCCAGGCATGCTGCCAGCCTTTTCTCTGGAT...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCCTTAGAACAATAATATaGCTATACAGGCCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPLRTII*LYRPQL
Trigger: GAGCTGGGGCCTGTATAGCCATATTATTGTTCTAAG...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp GCTGGAGTGGAGACCCGATCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTTTTATGAATCATAGCTaGGTCTTTTCCAGAACTCAT +
Preference number: 2 (lower is better)
Translates to: AGVETRSPGSSARSWVETFMNHS*VFSRTH
Trigger: ATGAGTTCTGGAAAAGACCCAGCTATGATTCATAAA...AGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGATCGGGTCTCCACTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
3UTR-3UTR CCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCAGGACTCCAGGAACTaGCTGAGCCGGGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRQDSRN*LSRGGK
Trigger: CTTCCCACCCCGGCTCAGCCAGTTCCTGGAGTCCTG...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTAACCAGGGGTCCATCTaGGTCAATGACAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPNQGSI*VNDRGL
Trigger: CAGGCCTCTGTCATTGACTCAGATGGACCCCTGGTT...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCGGTGAGACTTATTGCTaGATTGGGGTCTCCTCACTG +
Preference number: 2 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGGETYC*IGVSSL
Trigger: CAGTGAGGAGACCCCAATTCAGCAATAAGTCTCACC...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGAGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTC +
Preference number: 2 (lower is better)
Translates to: APSWVKGLRVMIYVLELGEVFMP*LSMWEL
Trigger: GAGTTCCCACATGGACAGCCAGGGCATAAACACTTC...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CAA 90 bp AGAGCTAGGATTCAGGGGGAAGTACGGCTCCATAAAGCTCTAGAATaGGGTGTCTCTGGGATAAGAAGGTTAAACCCGTGGTCATCTGAG +
Preference number: 2 (lower is better)
Translates to: RARIQGEVRLHKALE*GVSGIRRLNPWSSE
Trigger: CTCAGATGACCACGGGTTTAACCTTCTTATCCCAGAGACACCCAATTCTAGAGCTTTATGGAGCCGTACTTCCCCCTGAATCCTAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCGTGGAAAGAAAGAAGTaGTCAGCCAGGACCATCTTC +
Preference number: 2 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGVERKK*SARTIF
Trigger: GAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCAC...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCTCTCAGGAAAAGGCATaGCGTTGTGTGAGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGSQEKA*RCVSVE
Trigger: TTCCACACTCACACAACGCCATGCCTTTTCCTGAGA...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CCA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGAAGAAGGTTAAACCCGTaGTCATCTGAGACTGGTTCC +
Preference number: 2 (lower is better)
Translates to: APSWVKGLRVMIYVLELGRRLNP*SSETGS
Trigger: GGAACCAGTCTCAGATGACCACGGGTTTAACCTTCT...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR TCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCAGGACACATGAATCCTaGGCTCCAGTGAATCTAGAA +
Preference number: 2 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGRTHES*APVNLE
Trigger: TTCTAGATTCACTGGAGCTCAGGATTCATGTGTCCT...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CAA 90 bp GCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTaGTCCTTTTTATTAAGGACATATTACTCTAAGGACCTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: AELGSPHWEGQGCIH*SFLLRTYYSKDLSF
Trigger: AAAGCTGAGGTCCTTAGAGTAATATGTCCTTAATAAAAAGGACAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR GCA 72 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGCAGCAGGGGTGAGAGC +
Preference number: 3 (lower is better)
Translates to: GSLRVEHLVGPG*SGHVCGSRGES
Trigger: GCTCTCACCCCTGCTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR CCA 72 bp GGGGTGAGAGCAGGACTGGGAGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTC +
Preference number: 3 (lower is better)
Translates to: GVRAGLGDRLWW*LAHWECREPPV
Trigger: GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTGCTCTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR CCA 72 bp GCAGGGGTGAGAGCAGGACTGGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCA +
Preference number: 3 (lower is better)
Translates to: AGVRAGLGDRLW*WLAHWECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTGCTCTCACCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR CCA 72 bp GCAGCAGGGGTGAGAGCAGGACTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCT +
Preference number: 3 (lower is better)
Translates to: AAGVRAGLGDRL*WWLAHWECREP
Trigger: AGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTGCTCTCACCCCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CAA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CAA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
3UTR CCA 72 bp AGGGGCACAGGACTCCAGGAACTGGCTGAGCCGGGGTaGGAAGTGTTTATGCCCTGGCTGTCCATGTGGGAA +
Preference number: 3 (lower is better)
Translates to: RGTGLQELAEPG*EVFMPWLSMWE
Trigger: TTCCCACATGGACAGCCAGGGCATAAACACTTCCCACCCCGGCTCAGCCAGTTCCTGGAGTCCTGTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR CCA 72 bp CCGGGGTGGGAAGTGTTTATGCCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGG +
Preference number: 3 (lower is better)
Translates to: PGWEVFMPWLSM*ELPAPSQEKAW
Trigger: CCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGGCATAAACACTTCCCACCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR CCA 72 bp GGGTTCCAGCACAGAGCCCTAGTGCAGAAGTGGCCCTaGCGAGGGTGTCCAGTGTTCCAGAATGTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: GFQHRALVQKWP*RGCPVFQNVSR
Trigger: TCTGGACACATTCTGGAACACTGGACACCCTCGCCAGGGCCACTTCTGCACTAGGGCTCTGTGCTGGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CAA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCACGACCTCAGCTGGGTaGAAGGAGCTAGAAACTGCA +
Preference number: 3 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPTTSAG*KELETA
Trigger: TGCAGTTTCTAGCTCCTTCAACCCAGCTGAGGTCGT...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CAA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCAGTCATGCCATAATTTaGACCCCTCCCCCATCCCAG +
Preference number: 3 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPSHAII*TPPPSQ
Trigger: CTGGGATGGGGGAGGGGTCAAAATTATGGCATGACT...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CAA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CAA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
3UTR-3UTR CAA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR TCA 72 bp TTCACCCTTCTTGGCCTGACCTGTAGGGGAGAAGGGTaGGACTTATTGCTGAATTGGGGTCTCCTCACTGGG +
Preference number: 3 (lower is better)
Translates to: FTLLGLTCRGEG*DLLLNWGLLTG
Trigger: CCCAGTGAGGAGACCCCAATTCAGCAATAAGTCTCACCCTTCTCCCCTACAGGTCAGGCCAAGAAGGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR TCA 72 bp TCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCA +
Preference number: 3 (lower is better)
Translates to: SQRHLRKRHGVV*VWKERSDQPGP
Trigger: TGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
3UTR TCA 72 bp TGTCTCTGGGATAAGAAGGTTAAACCCGTGGTCATCTaGGACTGGTTCCGGTTCAGGCCAAAGCCAACAGCT +
Preference number: 3 (lower is better)
Translates to: CLWDKKVKPVVI*DWFRFRPKPTA
Trigger: AGCTGTTGGCTTTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCCAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CCA 72 bp GAATTGGGTGTCTCTGGGATAAGAAGGTTAAACCCGTaGTCATCTGAGACTGGTTCCGGTTCAGGCCAAAGC +
Preference number: 3 (lower is better)
Translates to: ELGVSGIRRLNP*SSETGSGSGQS
Trigger: GCTTTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCCAGAGACACCCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR TCA 72 bp AGCAAGTTCTATCCAATTAGAAGCTGTTGGGGCGTATaGGGTCTGGAGTGCAAGAGGCCTTCACCCTTCTTG +
Preference number: 3 (lower is better)
Translates to: SKFYPIRSCWGV*GLECKRPSPFL
Trigger: CAAGAAGGGTGAAGGCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CAA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGACATAAAGCTCTAGAATaGGGTGTCTCTGGGATAAGA +
Preference number: 3 (lower is better)
Translates to: APSWVKGLRVMIYVLELGHKALE*GVSGIR
Trigger: TCTTATCCCAGAGACACCCAATTCTAGAGCTTTATG...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CCA 72 bp AGGGTGAGACTTATTGCTGAATTGGGGTCTCCTCACTaGGAGGGTCAAGGCTGTATCCATTTGTCCTTTTTA +
Preference number: 3 (lower is better)
Translates to: RVRLIAELGSPH*EGQGCIHLSFL
Trigger: TAAAAAGGACAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTCTCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR-3UTR CAA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTCATAAAGCTCTAGAATaGGGTGTCTCTGGGATAAGA +
Preference number: 3 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPHKALE*GVSGIR
Trigger: TCTTATCCCAGAGACACCCAATTCTAGAGCTTTATG...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR TCA 72 bp AAGAAATGGTTCTTGATTCATCCAGAAGTGTTTTTATaGATCATAGCTGGGTCTTTTCCAGAACTCATCCGT +
Preference number: 3 (lower is better)
Translates to: KKWFLIHPEVFL*IIAGSFPELIR
Trigger: ACGGATGAGTTCTGGAAAAGACCCAGCTATGATTCATAAAAACACTTCTGGATGAATCAAGAACCATTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAGCTTGGCGAGAGCCTTaGCTTGGCCCAGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAAWREP*LGPAPA
Trigger: GGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGC...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGCACTGGGCCGGTGGCTaGACCAGGCAGAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGHWAGG*TRQSGG
Trigger: GCCGCCGCTCTGCCTGGTCCAGCCACCGGCCCAGTG...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR TCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAGATGGAGAGGCAGGCTaGGTCACGTGGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRADGEAG*VTWGPG
Trigger: ACCGGGCCCCCACGTGACTCAGCCTGCCTCTCCATC...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000640112.1
CDS-3UTR GCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAGGCAAAGGGACTTGGTaGCGCGGGGACACACGCGCC +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAGKGTW*RGDTRA
Trigger: GGCGCGTGTGTCCCCGCGGCACCAAGTCCCTTTGCC...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCCACTGGGCCGGTGGCTaGACCAGGCAGAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGHWAGG*TRQSGG
Trigger: GCCGCCGCTCTGCCTGGTCCAGCCACCGGCCCAGTG...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCGGCGACGGGTGGCGCTaGCTTCGGCTCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCGDGWR*LRLQAP
Trigger: AGGAGCCTGGAGCCGAAGCCAGCGCCACCCGTCGCC...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCGGCGACGGGTGGCGCTaGCTTCGGCTCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLGDGWR*LRLQAP
Trigger: AGGAGCCTGGAGCCGAAGCCAGCGCCACCCGTCGCC...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAGGTGACCCAGGCATCTaGAAACCCCCGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAGDPGI*KPPGPS
Trigger: GGAGGGGCCCGGGGGTTTCCAGATGCCTGGGTCACC...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACACTATGGGCAGCCGGTaGCGCGGGGAGGAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYTMGSR*RGEEGA
Trigger: CGCGCCCTCCTCCCCGCGCCACCGGCTGCCCATAGT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATCTGTCCTGTCCTGTTaGTCCGGCGACGGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRASVLSC*SGDGWR
Trigger: GCGCCACCCGTCGCCGGATCAACAGGACAGGACAGA...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCAGAGCACTGGGCCGGTaGCTGGACCAGGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCRALGR*LDQAER
Trigger: CCGCTCTGCCTGGTCCAGCCACCGGCCCAGTGCTCT...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATAGAGCACTGGGCCGGTaGCTGGACCAGGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHRALGR*LDQAER
Trigger: CCGCTCTGCCTGGTCCAGCCACCGGCCCAGTGCTCT...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCGTGGCGCGGGGGTTATaGGAGGGGTGCCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSVARGL*EGCPAP
Trigger: CGGAGCTGGGCACCCCTCCCATAACCCCCGCGCCAC...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGTGGCGCGGGGGTTATaGGAGGGGTGCCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCVARGL*EGCPAP
Trigger: CGGAGCTGGGCACCCCTCCCATAACCCCCGCGCCAC...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCGAGAGCCTTGCCTTaGCCCAGCGCCGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRARALP*PSAGLS
Trigger: AGACAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGC...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCGCGAGAGCCTTGCCTTaGCCCAGCGCCGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLARALP*PSAGLS
Trigger: AGACAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGC...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGATGGAGAGGCAGGCTaGGTCACGTGGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTDGEAG*VTWGPG
Trigger: ACCGGGCCCCCACGTGACTCAGCCTGCCTCTCCATC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000640112.1
CDS-3UTR TCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGATGGAGAGGCAGGCTaGGTCACGTGGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGDGEAG*VTWGPG
Trigger: ACCGGGCCCCCACGTGACTCAGCCTGCCTCTCCATC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000640112.1
CDS-3UTR TCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCTGTCCTGTCCTGTTaGTCCGGCGACGGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCSVLSC*SGDGWR
Trigger: GCGCCACCCGTCGCCGGATCAACAGGACAGGACAGA...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR GCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATCGGACCTCCCGCTTCTaGCGGATCAGGCTACTGGCC +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHRTSRF*RIRLLA
Trigger: GGCCAGTAGCCTGATCCGGCAGAAGCGGGAGGTCCG...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR GCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCGGCAAAGGGACTTGGTaGCGCGGGGACACACGCGCC +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVGKGTW*RGDTRA
Trigger: GGCGCGTGTGTCCCCGCGGCACCAAGTCCCTTTGCC...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR GCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAGGCTGGCGAGGTAGCTaGAAGGACACCCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAGWRGS*KDTRGR
Trigger: TCTCCCTCGGGTGTCCTTGCAGCTACCTCGCCAGCC...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCACCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGAACCGAGCCCAGGCGTaGAGGAGCGGGAGAACCGGG +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQNRAQA*RSGRTG
Trigger: CCCGGTTCTCCCGCTCCTCCACGCCTGGGCTCGGTT...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGTGTCTGTCAGTCCGCTaGCTCCCGGGGGCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGCLSVR*LPGAQF
Trigger: GAACTGGGCCCCCGGGAGCCAGCGGACTGACAGACA...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGATGGCGCTCTGGATGGTaGCCACACGGAGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGWRSGW*PHGGPQ
Trigger: CTGTGGGCCTCCGTGTGGTCACCATCCAGAGCGCCA...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTAGATGGAGAGGCAGGCTaGGTCACGTGGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLDGEAG*VTWGPG
Trigger: ACCGGGCCCCCACGTGACTCAGCCTGCCTCTCCATC...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000640112.1
CDS-3UTR GCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCCGGACCTCCCGCTTCTaGCGGATCAGGCTACTGGCC +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSRTSRF*RIRLLA
Trigger: GGCCAGTAGCCTGATCCGGCAGAAGCGGGAGGTCCG...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR GCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGCTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCCTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCCTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCTCTGGCAAAGGGACTTaGTGCCGCGGGGACACACGC +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLSGKGT*CRGDTR
Trigger: GCGTGTGTCCCCGCGGCACCAAGTCCCTTTGCCAGA...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATCCTCTGGGGTGCCCTaGATGCTTCCGTCGGGATTC +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRASSGVP*MLPSGF
Trigger: GAATCCCGACGGAAGCATCCAGGGCACCCCAGAGGA...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATCCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCCCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GCTGGAGTGGAGACCCGATCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGVETRSPGSSARSWVETGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...AGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGATCGGGTCTCCACTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGGAGACCCGATCCCCTaGGAGCAGTGCCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRGDPIP*EQCQEL
Trigger: CAACTCCTGGCACTGCTCCCAGGGGATCGGGTCTCC...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACGCGAAGTCAGAGCACTaGGCCGGTGGCTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNAKSEH*AGGWTR
Trigger: CCTGGTCCAGCCACCGGCCCAGTGCTCTGACTTCGC...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTGCGAAGTCAGAGCACTaGGCCGGTGGCTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSAKSEH*AGGWTR
Trigger: CCTGGTCCAGCCACCGGCCCAGTGCTCTGACTTCGC...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCGTAGGCGGAGGACGATaGGGGTGGGGACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCVGGGR*GWGLLC
Trigger: ACACAGCAGTCCCCACCCCCATCGTCCTCCGCCTAC...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAGGTGACCCAGGCATCTaGAAACCCCCGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGGDPGI*KPPGPS
Trigger: GGAGGGGCCCGGGGGTTTCCAGATGCCTGGGTCACC...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCACCCGAGGGAGAGCTaGGGAGATTGGCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVHPRES*GDWLGA
Trigger: GGCTCCGAGCCAATCTCCCCAGCTCTCCCTCGGGTG...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGGACCCGATTTCGGAGTaGCGCGGGGGTTATGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGDPISE*RGGYGR
Trigger: CCTCCCATAACCCCCGCGCCACTCCGAAATCGGGTC...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGGAGGAGGGCGCGAGGTaGCTACCCTTAGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQEEGAR*LPLGEL
Trigger: CAGCTCCCCTAAGGGTAGCCACCTCGCGCCCTCCTC...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCGAGGAGGGCGCGAGGTaGCTACCCTTAGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVEEGAR*LPLGEL
Trigger: CAGCTCCCCTAAGGGTAGCCACCTCGCGCCCTCCTC...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCGGATTGTACCACTATaGGCAGCCGGTGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSRIVPL*AAGGAG
Trigger: CCCCGCGCCACCGGCTGCCCATAGTGGTACAATCCG...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTTGTCTGTCAGTCCGCTaGCTCCCGGGGGCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSCLSVR*LPGAQF
Trigger: GAACTGGGCCCCCGGGAGCCAGCGGACTGACAGACA...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGGCTGCCGCTAGCTTaGCGAGAGCCTTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNRLPLA*REPCLG
Trigger: GCCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCG...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRARHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGCGTAGGGTCCCCTaGGCCTACGGGACCCGATTT +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVQRRVP*AYGTRF
Trigger: AAATCGGGTCCCGTAGGCTCAGGGGACCCTACGCTG...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGCAGCGTAGGGTCCCCTaGGCCTACGGGACCCGATTT +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQQRRVP*AYGTRF
Trigger: AAATCGGGTCCCGTAGGCTCAGGGGACCCTACGCTG...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCGCCAGAGGGACTCCCTaGCTGTCGTACATGGACGGG +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGARGTP*LSYMDG
Trigger: CCCGTCCATGTACGACAGTCAGGGAGTCCCTCTGGC...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGACCAGCAGGGGTACTaGAGGGGCAGCGTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTDQQGY*RGSVFA
Trigger: CGCAAACACGCTGCCCCTTCAGTACCCCTGCTGGTC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCTCCTCTGGGGTGCCCTaGATGCTTCCGTCGGGATTC +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLSSGVP*MLPSGF
Trigger: GAATCCCGACGGAAGCATCCAGGGCACCCCAGAGGA...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCCCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACGGTTGTGGTGGTGGCTaGCTCACTGGGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYGCGGG*LTGSAG
Trigger: CCCTGCACTCCCAGTGAGCCAGCCACCACCACAACC...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCAGGACTCCAGGAACTaGCTGAGCCGGGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYQDSRN*LSRGGK
Trigger: CTTCCCACCCCGGCTCAGCCAGTTCCTGGAGTCCTG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCAGGACTCCAGGAACTaGCTGAGCCGGGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSQDSRN*LSRGGK
Trigger: CTTCCCACCCCGGCTCAGCCAGTTCCTGGAGTCCTG...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCGTGCAGAAGTGGCCCTaGCGAGGGTGTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCVQKWP*RGCPVF
Trigger: GAACACTGGACACCCTCGCCAGGGCCACTTCTGCAC...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCGTAGGCGGAGGACGATaGGGGTGGGGACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSVGGGR*GWGLLC
Trigger: ACACAGCAGTCCCCACCCCCATCGTCCTCCGCCTAC...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACACCCGAGGGAGAGCTaGGGAGATTGGCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLHPRES*GDWLGA
Trigger: GGCTCCGAGCCAATCTCCCCAGCTCTCCCTCGGGTG...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACGGATTGTACCACTATaGGCAGCCGGTGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGRIVPL*AAGGAG
Trigger: CCCCGCGCCACCGGCTGCCCATAGTGGTACAATCCG...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAGCGTGTTTGCGAAGGTaGGGGATCTTGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAACLRR*GILAAA
Trigger: TGCTGCTGCCAAGATCCCCCACCTTCGCAAACACGC...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATCTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACACTCCAGGAACTGGCTaGGCCGGGGTGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNTPGTG*AGVGSV
Trigger: AACACTTCCCACCCCGGCTCAGCCAGTTCCTGGAGT...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGACTCCAGGAACTGGCTaGGCCGGGGTGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQTPGTG*AGVGSV
Trigger: AACACTTCCCACCCCGGCTCAGCCAGTTCCTGGAGT...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAAAACCCGTGGTCATCTaGGACTGGTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAKPVVI*DWFRFR
Trigger: CCTGAACCGGAACCAGTCTCAGATGACCACGGGTTT...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCGAGTTGGGTGGAGACTaGGTGGGGTTTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCELGGD*VGFVWV
Trigger: CACCCACACAAACCCCACTCAGTCTCCACCCAACTC...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTACCCTCGGGAAGGAGTaGGGGTGTCTCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSTLGKE*GCLCRA
Trigger: AGCTCTGCAGAGACACCCTCACTCCTTCCCGAGGGT...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR TCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCACCCTCGGGAAGGAGTaGGGGTGTCTCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVTLGKE*GCLCRA
Trigger: AGCTCTGCAGAGACACCCTCACTCCTTCCCGAGGGT...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR TCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGCCCTCCGCTCCAGATTaGAAGAATCGCGAGAACCGG +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRPSAPD*KNRENR
Trigger: CCGGTTCTCGCGATTCTTTCAATCTGGAGCGGAGGG...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCACAGAAATCCTTGGGGTaGCCCAGGCATCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAQKSLG*PRHLET
Trigger: GGTTTCCAGATGCCTGGGTCACCCCAAGGATTTCTG...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAGCCCAGCTCCGTTCTTaGAGCGCAGGTCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGAQLRS*SAGHRR
Trigger: CCTCCTGTGACCTGCGCTTCAAGAACGGAGCTGGGC...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGCCAGAGGGACTCCCTaGCTGTCGTACATGGACGGG +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHARGTP*LSYMDG
Trigger: CCCGTCCATGTACGACAGTCAGGGAGTCCCTCTGGC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATCTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCCTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSALGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTGCGTGCGGCTGGAGCTaGAGAAATCCTTGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSACGWS*RNPWGD
Trigger: GTCACCCCAAGGATTTCTGCAGCTCCAGCCGCACGC...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCGGGTTATGGGAGGGGTaGCCAGCTCCGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCGLWEG*PAPFLK
Trigger: CTTCAAGAACGGAGCTGGGCACCCCTCCCATAACCC...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATTCTGGCAAAGGGACTTaGTGCCGCGGGGACACACGC +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHSGKGT*CRGDTR
Trigger: GCGTGTGTCCCCGCGGCACCAAGTCCCTTTGCCAGA...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCTCCTCTGGGGTGCCCTaGATGCTTCCGTCGGGATTC +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVSSGVP*MLPSGF
Trigger: GAATCCCGACGGAAGCATCCAGGGCACCCCAGAGGA...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGTTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCTTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAAGGCTCCTGGTACATaGCCACCTCCAGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGKAPGT*PPPGAW
Trigger: CCAAGCTCCTGGAGGTGGCCATGTACCAGGAGCCTT...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGATGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGCCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQPWLSM*ELPAPS
Trigger: AGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGG...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNPWLSM*ELPAPS
Trigger: AGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGG...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCCCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGPWLSM*ELPAPS
Trigger: AGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGG...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCCTGGCTGAGCCGGGGTaGGAAGTGTTTATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSLAEPG*EVFMPW
Trigger: CCAGGGCATAAACACTTCCCACCCCGGCTCAGCCAG...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCCTGGCTGAGCCGGGGTaGGAAGTGTTTATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGLAEPG*EVFMPW
Trigger: CCAGGGCATAAACACTTCCCACCCCGGCTCAGCCAG...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCGTGCAGAAGTGGCCCTaGCGAGGGTGTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVVQKWP*RGCPVF
Trigger: GAACACTGGACACCCTCGCCAGGGCCACTTCTGCAC...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGGAGACCCGATCCCCTaGGAGCAGTGCCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHGDPIP*EQCQEL
Trigger: CAACTCCTGGCACTGCTCCCAGGGGATCGGGTCTCC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACGGAGGACGATGGGGGTaGGGACTGCTGTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYGGRWG*GLLCWE
Trigger: TTCCCAACACAGCAGTCCCCACCCCCATCGTCCTCC...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCCTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATACTCCAGGAACTGGCTaGGCCGGGGTGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHTPGTG*AGVGSV
Trigger: AACACTTCCCACCCCGGCTCAGCCAGTTCCTGGAGT...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCACCCTTCTTGGCCTaGCCTGTAGGGGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTSPFLA*PVGEKG
Trigger: ACCCTTCTCCCCTACAGGTCAGGCCAAGAAGGGTGA...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTTCACCCTTCTTGGCCTaGCCTGTAGGGGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSSPFLA*PVGEKG
Trigger: ACCCTTCTCCCCTACAGGTCAGGCCAAGAAGGGTGA...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGAGCTGTTGGGGCGTATaGGGTCTGGAGTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPGSSARSWVETEWGLCGSCWGV*GLECKR
Trigger: CCTCTTGCACTCCAGACCTCATACGCCCCAACAGCT...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTAGCTGTTGGGGCGTATaGGGTCTGGAGTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSSCWGV*GLECKR
Trigger: CCTCTTGCACTCCAGACCTCATACGCCCCAACAGCT...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGAGTTGGGTGGAGACTaGGTGGGGTTTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGELGGD*VGFVWV
Trigger: CACCCACACAAACCCCACTCAGTCTCCACCCAACTC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGCCCTCCGCTCCAGATTaGAAGAATCGCGAGAACCGG +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQPSAPD*KNRENR
Trigger: CCGGTTCTCGCGATTCTTTCAATCTGGAGCGGAGGG...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAGCCGTGAACTGTGTCTaGGTTCCTGCCAGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGAVNCV*VPASVG
Trigger: CCCTACGCTGGCAGGAACTCAGACACAGTTCACGGC...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGGTGGGAAGTGTTTATaGCCTGGCTGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRGGKCL*PGCPCG
Trigger: CCCACATGGACAGCCAGGGCATAAACACTTCCCACC...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR GCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGGTGGGAAGTGTTTATaGCCTGGCTGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHGGKCL*PGCPCG
Trigger: CCCACATGGACAGCCAGGGCATAAACACTTCCCACC...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGCGTGCGGCTGGAGCTaGAGAAATCCTTGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHACGWS*RNPWGD
Trigger: GTCACCCCAAGGATTTCTGCAGCTCCAGCCGCACGC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGGGCTGGCGAGGTAGCTaGAAGGACACCCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKGWRGS*KDTRGR
Trigger: TCTCCCTCGGGTGTCCTTGCAGCTACCTCGCCAGCC...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGGTTATGGGAGGGGTaGCCAGCTCCGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCGLWEG*PAPFLK
Trigger: CTTCAAGAACGGAGCTGGGCACCCCTCCCATAACCC...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCGCTTGGCGAGAGCCTTaGCTTGGCCCAGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSAWREP*LGPAPA
Trigger: GGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGC...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACAAGGGGCAGCGTGTTTaGGAAGGTGGGGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYKGQRV*EGGGSW
Trigger: CCAAGATCCCCCACCTTCGCAAACACGCTGCCCCTT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCAAGGGGCAGCGTGTTTaGGAAGGTGGGGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVKGQRV*EGGGSW
Trigger: CCAAGATCCCCCACCTTCGCAAACACGCTGCCCCTT...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAAAGGCTCCTGGTACATaGCCACCTCCAGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGKAPGT*PPPGAW
Trigger: CCAAGCTCCTGGAGGTGGCCATGTACCAGGAGCCTT...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCAAGGCTCCTGGTACATaGCCACCTCCAGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTKAPGT*PPPGAW
Trigger: CCAAGCTCCTGGAGGTGGCCATGTACCAGGAGCCTT...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTAAGGCTCCTGGTACATaGCCACCTCCAGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCKAPGT*PPPGAW
Trigger: CCAAGCTCCTGGAGGTGGCCATGTACCAGGAGCCTT...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSAASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSAWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTATGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTAGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCCTGGCTGAGCCGGGGTaGGAAGTGTTTATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSALAEPG*EVFMPW
Trigger: CCAGGGCATAAACACTTCCCACCCCGGCTCAGCCAG...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAATCCAGAGAAAAGGCTaGCAGCATGCCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAIQRKG*QHAWVP
Trigger: TGGAACCCAGGCATGCTGCCAGCCTTTTCTCTGGAT...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACAGCAGTGCCAGGAGTTaGGTGGAGACTGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYSSARS*VETEWG
Trigger: ACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGTTGAGAAAGCTGGAGTaGAGACCCGATCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRLRKLE*RPDPLG
Trigger: TCCCAGGGGATCGGGTCTCCACTCCAGCTTTCTCAA...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGAGAGCTGGGGAGATTaGCTCGGAGCCAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHESWGD*LGASRA
Trigger: AGCTCTGCTGGCTCCGAGCCAATCTCCCCAGCTCTC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCGCGTGTTTGCGAAGGTaGGGGATCTTGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGACLRR*GILAAA
Trigger: TGCTGCTGCCAAGATCCCCCACCTTCGCAAACACGC...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCCCTCTCTTTCACTCCTaGGAAAGCTGGTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCPLFHS*ESWCGS
Trigger: GGACCCACACCAGCTTTCCCAGGAGTGAAAGAGAGG...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAATGGCTCAGTGGCAATaGAAAGGGGCACAGGACTCC +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGMAQWQ*KGAQDS
Trigger: GGAGTCCTGTGCCCCTTTTCATTGCCACTGAGCCAT...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCAACCAGGGGTCCATCTaGGTCAATGACAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVNQGSI*VNDRGL
Trigger: CAGGCCTCTGTCATTGACTCAGATGGACCCCTGGTT...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACAAACCCGTGGTCATCTaGGACTGGTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYKPVVI*DWFRFR
Trigger: CCTGAACCGGAACCAGTCTCAGATGACCACGGGTTT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGCCAGCTTCCCTACTATaGGCCAGGGATCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRPASLL*ARDPSK
Trigger: TTTGGAAGGATCCCTGGCTCATAGTAGGGAAGCTGG...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATTCACCCTTCTTGGCCTaGCCTGTAGGGGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHSPFLA*PVGEKG
Trigger: ACCCTTCTCCCCTACAGGTCAGGCCAAGAAGGGTGA...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCGAGTTGGGTGGAGACTaGGTGGGGTTTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSAELGGD*VGFVWV
Trigger: CACCCACACAAACCCCACTCAGTCTCCACCCAACTC...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGAGTTGGGTGGAGACTaGGTGGGGTTTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHELGGD*VGFVWV
Trigger: CACCCACACAAACCCCACTCAGTCTCCACCCAACTC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCGATGGAGAGGCAGGCTaGGTCACGTGGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLDGEAG*VTWGPG
Trigger: ACCGGGCCCCCACGTGACTCAGCCTGCCTCTCCATC...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000640112.1
CDS-3UTR TCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACACGATGCCTTTGAGCTaGGGCTCTGGAGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNTMPLS*GSGERD
Trigger: GTCTCTCTCTCCAGAGCCTCAGCTCAAAGGCATCGT...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572907.5
ENST00000575398.5
ENST00000638480.1
ENST00000640112.1
CDS-3UTR TCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCACGATGCCTTTGAGCTaGGGCTCTGGAGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGTMPLS*GSGERD
Trigger: GTCTCTCTCTCCAGAGCCTCAGCTCAAAGGCATCGT...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572907.5
ENST00000575398.5
ENST00000638480.1
ENST00000640112.1
CDS-3UTR TCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGAAAGAGAAGGGAAACTaGGGCACAGTCTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRKEKGN*GTVWQG
Trigger: TCCCTGCCAGACTGTGCCTCAGTTTCCCTTCTCTTT...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGACTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: VGTPSAISGKGMALCECGLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR GCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGGTGGGAAGTGTTTATaGCCTGGCTGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTGGKCL*PGCPCG
Trigger: CCCACATGGACAGCCAGGGCATAAACACTTCCCACC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR GCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGGTGGGAAGTGTTTATaGCCTGGCTGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGGGKCL*PGCPCG
Trigger: CCCACATGGACAGCCAGGGCATAAACACTTCCCACC...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACAAAAGGCTGGCAGCATaGCTGGGTTCCAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYKRLAA*LGSSTE
Trigger: CTCTGTGCTGGAACCCAGGCATGCTGCCAGCCTTTT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACACTCAGAGGGTGGGCTaGGGATTGTACCACTATGGG +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYTQRVG*GLYHYG
Trigger: CCCATAGTGGTACAATCCGCAGCCCACCCTCTGAGT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACACTCAGAGGGTGGGCTaGGGATTGTACCACTATGGG +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNTQRVG*GLYHYG
Trigger: CCCATAGTGGTACAATCCGCAGCCCACCCTCTGAGT...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGCCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGATTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTAAAGGCTCCTGGTACATaGCCACCTCCAGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLKAPGT*PPPGAW
Trigger: CCAAGCTCCTGGAGGTGGCCATGTACCAGGAGCCTT...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTTGGGGTCTCCTCACTaGGAGGGTCAAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTLGSPH*EGQGCI
Trigger: GATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAA...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGTGCCAGGAGTTGGGTaGAGACTGAGTGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGVPGVG*RLSGVC
Trigger: ACAAACCCCACTCAGTCTCCACCCAACTCCTGGCAC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGTGCCAGGAGTTGGGTaGAGACTGAGTGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGVPGVG*RLSGVC
Trigger: ACAAACCCCACTCAGTCTCCACCCAACTCCTGGCAC...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCTTGAGAAAGCTGGAGTaGAGACCCGATCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVLRKLE*RPDPLG
Trigger: TCCCAGGGGATCGGGTCTCCACTCCAGCTTTCTCAA...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTACTATGGGCAGCCGGTaGCGCGGGGAGGAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSTMGSR*RGEEGA
Trigger: CGCGCCCTCCTCCCCGCGCCACCGGCTGCCCATAGT...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACCTCTCTTTCACTCCTaGGAAAGCTGGTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGPLFHS*ESWCGS
Trigger: GGACCCACACCAGCTTTCCCAGGAGTGAAAGAGAGG...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTGGCGCTCTGGATGGTaGCCACACGGAGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSWRSGW*PHGGPQ
Trigger: CTGTGGGCCTCCGTGTGGTCACCATCCAGAGCGCCA...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRARHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAACTCCAGGAACTGGCTaGGCCGGGGTGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: VGTPSAISGKGMALCECGTPGTG*AGVGSV
Trigger: AACACTTCCCACCCCGGCTCAGCCAGTTCCTGGAGT...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAAAAGAGAAGGGAAACTaGGGCACAGTCTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGKEKGN*GTVWQG
Trigger: TCCCTGCCAGACTGTGCCTCAGTTTCCCTTCTCTTT...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACAGAAATCCTTGGGGTaGCCCAGGCATCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGQKSLG*PRHLET
Trigger: GGTTTCCAGATGCCTGGGTCACCCCAAGGATTTCTG...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCAGCAGGATGAGGAGCTaGTTCTGGCAAAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGSRMRS*FWQRDL
Trigger: CAAGTCCCTTTGCCAGAAGCAGCTCCTCATCCTGCT...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CCA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: VGTPSAISGKGMALCECGGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGSSARSWVETEWGLCGVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGTTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTAAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGCCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEPWLSM*ELPAPS
Trigger: AGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGG...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAATCCAGAGAAAAGGCTaGCAGCATGCCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGIQRKG*QHAWVP
Trigger: TGGAACCCAGGCATGCTGCCAGCCTTTTCTCTGGAT...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATCCAGAGAAAAGGCTaGCAGCATGCCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYIQRKG*QHAWVP
Trigger: TGGAACCCAGGCATGCTGCCAGCCTTTTCTCTGGAT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTTGGCACGACCTCAGCTaGGTTGAAGGAGCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCWHDLS*VEGARN
Trigger: GTTTCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCA...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATAGCTGCAGAAATCCTTaGGGTGACCCAGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHSCRNP*GDPGIW
Trigger: CCAGATGCCTGGGTCACCCCAAGGATTTCTGCAGCT...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCGGCTGCCGCTAGCTTaGCGAGAGCCTTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLRLPLA*REPCLG
Trigger: GCCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCG...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGGAAGGTGGGGGATCTTaGCAGCAGCAAATTGACCAC +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQEGGGS*QQQIDH
Trigger: GTGGTCAATTTGCTGCTGCCAAGATCCCCCACCTTC...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATCTGGGAAAGCTGGTGTaGGTCCCTTCTGTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHLGKLV*VPSVSY
Trigger: ATAGGAAACAGAAGGGACCCACACCAGCTTTCCCAG...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCCACTCCTGGGAAAGCTaGTGTGGGTCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGHSWES*CGSLLF
Trigger: AAACAGAAGGGACCCACACCAGCTTTCCCAGGAGTG...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTCACTCCTGGGAAAGCTaGTGTGGGTCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCHSWES*CGSLLF
Trigger: AAACAGAAGGGACCCACACCAGCTTTCCCAGGAGTG...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCCCTTGGACAGCAGGATaGGGAGCTGCTTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPPWTAG*GAASGK
Trigger: TTTGCCAGAAGCAGCTCCTCATCCTGCTGTCCAAGG...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR TCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGACTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: VGTPSAISGKGMALCECGLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCGTGGAAAGAAAGAAGTaGTCAGCCAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCVERKK*SARTIF
Trigger: GAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCAC...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGGTGGAAAGAAAGAAGTaGTCAGCCAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGVERKK*SARTIF
Trigger: GAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCAC...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRRHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGRHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCAGCTTCCCTACTATaGGCCAGGGATCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGPASLL*ARDPSK
Trigger: TTTGGAAGGATCCCTGGCTCATAGTAGGGAAGCTGG...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGGGTGAGACTTATTGCTaGATTGGGGTCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: SPGSSARSWVETEWGLCGGETYC*IGVSSL
Trigger: CAGTGAGGAGACCCCAATTCAGCAATAAGTCTCACC...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAGGTGAGACTTATTGCTaGATTGGGGTCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGGETYC*IGVSSL
Trigger: CAGTGAGGAGACCCCAATTCAGCAATAAGTCTCACC...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTGTAGGGGAGAAGGGTaGGACTTATTGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCCRGEG*DLLLNW
Trigger: CCAATTCAGCAATAAGTCTCACCCTTCTCCCCTACA...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTACCCTATCCAAGTCTaGGGCTATGGAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTYPIQV*GYGSLP
Trigger: AGGGAGACTTCCATAGCCTCAGACTTGGATAGGGTA...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGACGATGCCTTTGAGCTaGGGCTCTGGAGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKTMPLS*GSGERD
Trigger: GTCTCTCTCTCCAGAGCCTCAGCTCAAAGGCATCGT...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000572907.5
ENST00000575398.5
ENST00000638480.1
ENST00000640112.1
CDS-3UTR GCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCCAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGCAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTCAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCCACCCAACACAGATaGAGGTTCAGTCATGCCATA +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCSTQHR*RFSHAI
Trigger: TATGGCATGACTGAACCTGCATCTGTGTTGGGTGGA...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSAVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGAAGGCTCCTGGTACATaGCCACCTCCAGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEKAPGT*PPPGAW
Trigger: CCAAGCTCCTGGAGGTGGCCATGTACCAGGAGCCTT...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: MWELPAPSQEKAWRCVSVWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...CACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCTCTCAGGAAAAGGCATaGCGTTGTGTGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLSQEKA*RCVSVE
Trigger: TTCCACACTCACACAACGCCATGCCTTTTCCTGAGA...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGEVFMP*LSMWEL
Trigger: GAGTTCCCACATGGACAGCCAGGGCATAAACACTTC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGCTGGCTGAGCCGGGGTaGGAAGTGTTTATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: MWELPAPSQEKAWRCVSVLAEPG*EVFMPW
Trigger: CCAGGGCATAAACACTTCCCACCCCGGCTCAGCCAG...CACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCCAGGACTCCAGGAACTaGCTGAGCCGGGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSQDSRN*LSRGGK
Trigger: CTTCCCACCCCGGCTCAGCCAGTTCCTGGAGTCCTG...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGGCTTTAAAGGGGACCTaGAAGGAATTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQALKGT*KEFLLR
Trigger: CCTCAGCAGGAATTCCTTCCAGGTCCCCTTTAAAGC...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGACTTATTGCTGAATTaGGGTCTCCTCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGDLLLN*GLLTGR
Trigger: CCTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCGACTTATTGCTGAATTaGGGTCTCCTCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSDLLLN*GLLTGR
Trigger: CCTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTC...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCAAAAGTGACCTGCCTTaGAGCCTTAGTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVKSDLP*SLSPSL
Trigger: AAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTT...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCGACCCGATTTCGGAGTaGCGCGGGGGTTATGGGAGG +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSDPISE*RGGYGR
Trigger: CCTCCCATAACCCCCGCGCCACTCCGAAATCGGGTC...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGGTCCTACTCAGAGGGTaGGCTGCGGATTGTACCACT +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKVLLRG*AADCTT
Trigger: AGTGGTACAATCCGCAGCCCACCCTCTGAGTAGGAC...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAGAAGGTGGGGGATCTTaGCAGCAGCAAATTGACCAC +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGEGGGS*QQQIDH
Trigger: GTGGTCAATTTGCTGCTGCCAAGATCCCCCACCTTC...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCTGGGAAAGCTGGTGTaGGTCCCTTCTGTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVLGKLV*VPSVSY
Trigger: ATAGGAAACAGAAGGGACCCACACCAGCTTTCCCAG...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTGGCGCTCTGGATGGTaGCCACACGGAGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDWRSGW*PHGGPQ
Trigger: CTGTGGGCCTCCGTGTGGTCACCATCCAGAGCGCCA...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGTGGAAAGAAAGAAGTaGTCAGCCAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTVERKK*SARTIF
Trigger: GAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCAC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGGTGGAAAGAAAGAAGTaGTCAGCCAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: SPGSSARSWVETEWGLCGVERKK*SARTIF
Trigger: GAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCAC...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCGTGGAAAGAAAGAAGTaGTCAGCCAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSVERKK*SARTIF
Trigger: GAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCAC...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQRHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGAAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RLWWWLAHWECREPPVQGRHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...TCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGATGGCTCAGTGGCAATaGAAAGGGGCACAGGACTCC +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEMAQWQ*KGAQDS
Trigger: GGAGTCCTGTGCCCCTTTTCATTGCCACTGAGCCAT...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCAGGACACATGAATCCTaGGCTCCAGTGAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCRTHES*APVNLE
Trigger: TTCTAGATTCACTGGAGCTCAGGATTCATGTGTCCT...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCTACCCTATCCAAGTCTaGGGCTATGGAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSAYPIQV*GYGSLP
Trigger: AGGGAGACTTCCATAGCCTCAGACTTGGATAGGGTA...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCGCCGTGAACTGTGTCTaGGTTCCTGCCAGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSAVNCV*VPASVG
Trigger: CCCTACGCTGGCAGGAACTCAGACACAGTTCACGGC...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: LWWWLAHWECREPPVQGLQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGGGTGGGAAGTGTTTATaGCCTGGCTGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEGGKCL*PGCPCG
Trigger: CCCACATGGACAGCCAGGGCATAAACACTTCCCACC...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR GCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGAAAAGGCTGGCAGCATaGCTGGGTTCCAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEKRLAA*LGSSTE
Trigger: CTCTGTGCTGGAACCCAGGCATGCTGCCAGCCTTTT...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGCTTCCAAAATTCCTCTaGCCTTCTCCAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQLPKFL*PSPDSV
Trigger: GACAGAGTCTGGAGAAGGGCAGAGGAATTTTGGAAG...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCTTCCAAAATTCCTCTaGCCTTCTCCAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSLPKFL*PSPDSV
Trigger: GACAGAGTCTGGAGAAGGGCAGAGGAATTTTGGAAG...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGTCCACCCAACACAGATaGAGGTTCAGTCATGCCATA +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQSTQHR*RFSHAI
Trigger: TATGGCATGACTGAACCTGCATCTGTGTTGGGTGGA...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCGGCATCTACTCCTCTTaGAACAAGCCAGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCGIYSS*NKPEVE
Trigger: TTCTACTTCTGGCTTGTTGCAAGAGGAGTAGATGCC...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAACCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: TPSAISGKGMALCECGKKPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTACCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCTCTCAGGAAAAGGCATaGCGTTGTGTGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GDRLWWWLAHWECREPPVSQEKA*RCVSVE
Trigger: TTCCACACTCACACAACGCCATGCCTTTTCCTGAGA...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACTCTCAGGAAAAGGCATaGCGTTGTGTGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYSQEKA*RCVSVE
Trigger: TTCCACACTCACACAACGCCATGCCTTTTCCTGAGA...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGTCTCAGGAAAAGGCATaGCGTTGTGTGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQSQEKA*RCVSVE
Trigger: TTCCACACTCACACAACGCCATGCCTTTTCCTGAGA...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGEVFMP*LSMWEL
Trigger: GAGTTCCCACATGGACAGCCAGGGCATAAACACTTC...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCCTGGCTGAGCCGGGGTaGGAAGTGTTTATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSLAEPG*EVFMPW
Trigger: CCAGGGCATAAACACTTCCCACCCCGGCTCAGCCAG...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGCTTTAAAGGGGACCTaGAAGGAATTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHALKGT*KEFLLR
Trigger: CCTCAGCAGGAATTCCTTCCAGGTCCCCTTTAAAGC...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGAGTGCCAGGAGTTGGGTaGAGACTGAGTGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARVPGVG*RLSGVC
Trigger: ACAAACCCCACTCAGTCTCCACCCAACTCCTGGCAC...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGTTTGAGCTGAGGCTCTaGAGAGAGAGACATTCATCA +
Preference number: 4 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRFELRL*RERHSS
Trigger: TGATGAATGTCTCTCTCTCCAGAGCCTCAGCTCAAA...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575398.5
ENST00000638480.1
CDS-3UTR CCA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGACTGTCGTACATaGACGGGGACCAATTCTAAC +
Preference number: 4 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGPDCRT*TGTNSN
Trigger: GTTAGAATTGGTCCCCGTCCATGTACGACAGTCAGG...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCCTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGAGGACACATGAATCCTaGGCTCCAGTGAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQRTHES*APVNLE
Trigger: TTCTAGATTCACTGGAGCTCAGGATTCATGTGTCCT...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp ATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGAAACCCGTGGTCATCTaGGACTGGTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: MWELPAPSQEKAWRCVSVKPVVI*DWFRFR
Trigger: CCTGAACCGGAACCAGTCTCAGATGACCACGGGTTT...CACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCACTCCACGTTTTTCTaGAAAAATCTAGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYHSTFF*KNLDRP
Trigger: GGGCCTGTCTAGATTTTTTCAGAAAAACGTGGAGTG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGCCCAGCTCCGTTCTTaGAGCGCAGGTCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDAQLRS*SAGHRR
Trigger: CCTCCTGTGACCTGCGCTTCAAGAACGGAGCTGGGC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGACCAGCAGGGGTACTaGAGGGGCAGCGTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDDQQGY*RGSVFA
Trigger: CGCAAACACGCTGCCCCTTCAGTACCCCTGCTGGTC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCCTGGGGTGCCCTGGATaGTTCCGTCGGGATTCGCCT +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPLGCPG*FRRDSP
Trigger: AGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAG...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR GCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTACTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAACTAGTGGGACCTGGCTaGTCAGGGCATGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TPSAISGKGMALCECGKKLVGPG*SGHVCG
Trigger: GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAG...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR GCA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCGGCATCTACTCCTCTTaGAACAAGCCAGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTGIYSS*NKPEVE
Trigger: TTCTACTTCTGGCTTGTTGCAAGAGGAGTAGATGCC...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACCCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCCCAGCTTGGCGCTCTaGATGGTGACCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSPSLAL*MVTTRR
Trigger: CCTCCGTGTGGTCACCATCCAGAGCGCCAAGCTGGG...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAACCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: TPSAISGKGMALCECGKKPWLSM*ELPAPS
Trigger: AGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGG...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKEVFMP*LSMWEL
Trigger: GAGTTCCCACATGGACAGCCAGGGCATAAACACTTC...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAACTGGCTGAGCCGGGGTaGGAAGTGTTTATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQLAEPG*EVFMPW
Trigger: CCAGGGCATAAACACTTCCCACCCCGGCTCAGCCAG...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCCAGGACTCCAGGAACTaGCTGAGCCGGGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGQDSRN*LSRGGK
Trigger: CTTCCCACCCCGGCTCAGCCAGTTCCTGGAGTCCTG...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATAGAAGGTTAAACCCGTaGTCATCTGAGACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: WWWLAHWECREPPVQGLHRRLNP*SSETGS
Trigger: GGAACCAGTCTCAGATGACCACGGGTTTAACCTTCT...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGGCACGACCTCAGCTaGGTTGAAGGAGCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEWHDLS*VEGARN
Trigger: GTTTCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCA...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGATGGCACGACCTCAGCTaGGTTGAAGGAGCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: VGTPSAISGKGMALCECGWHDLS*VEGARN
Trigger: GTTTCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCA...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGAAAAGTGACCTGCCTTaGAGCCTTAGTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKKSDLP*SLSPSL
Trigger: AAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTT...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGGAGACCCGATCCCCTaGGAGCAGTGCCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDGDPIP*EQCQEL
Trigger: CAACTCCTGGCACTGCTCCCAGGGGATCGGGTCTCC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGCCTGACTGTCGTACATaGACGGGGACCAATTCTAAC +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKPDCRT*TGTNSN
Trigger: GTTAGAATTGGTCCCCGTCCATGTACGACAGTCAGG...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKRHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCACTCCAGGAACTGGCTaGGCCGGGGTGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGTPGTG*AGVGSV
Trigger: AACACTTCCCACCCCGGCTCAGCCAGTTCCTGGAGT...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp ATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGTCCATCTGAGTCAATaGCAGAGGCCTGACAGATCC +
Preference number: 4 (lower is better)
Translates to: MWELPAPSQEKAWRCVSVVHLSQ*QRPDRS
Trigger: GGATCTGTCAGGCCTCTGTCATTGACTCAGATGGAC...CACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAAGCTGTTGGGGCGTATaGGGTCTGGAGTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLSCWGV*GLECKR
Trigger: CCTCTTGCACTCCAGACCTCATACGCCCCAACAGCT...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCTTGGCAGCAGCAAATTaGCCACAGGGTAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLLAAAN*PQGRGS
Trigger: AGAGCCCCTACCCTGTGGTCAATTTGCTGCTGCCAA...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGCTTCCAAAATTCCTCTaGCCTTCTCCAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKLPKFL*PSPDSV
Trigger: GACAGAGTCTGGAGAAGGGCAGAGGAATTTTGGAAG...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSGAGIL*GALDAS
Trigger: GGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCC...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAATTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTATTTCCCTTCATGACCTaGCCCTCCTTGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLFPFMT*PSLSRP
Trigger: CGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAA...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAAAAGGCTCCTGGTACATaGCCACCTCCAGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQKAPGT*PPPGAW
Trigger: CCAAGCTCCTGGAGGTGGCCATGTACCAGGAGCCTT...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTTGGTGGCTGGCTCACTaGGAGTGCAGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSWWLAH*ECREPP
Trigger: TGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCA...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGACAGGTTGTGGTGGTaGCTGGCTCACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPDRLWW*LAHWEC
Trigger: GCACTCCCAGTGAGCCAGCCACCACCACAACCTGTC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGAGGAGACAGGTTGTGGTaGTGGCTGGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: APSWVKGLRVMIYVLELGGDRLW*WLAHWE
Trigger: CTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGAACTTACTCTGGGAGACAGGTTGTaGTGGTGGCTGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SSVIGITQEGGRVGLELTLGDRL*WWLAHW
Trigger: CCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAG...AGTAAGTTCTAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCGCACCTAGTGGGACCTaGCTGCTCAGGGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGAPSGT*LLRACV
Trigger: CACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGC...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGAACTTACTCCCTGGCTGTCCATGTaGGAACTCCCAGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: SSVIGITQEGGRVGLELTPWLSM*ELPAPS
Trigger: AGATGGCGCTGGGAGTTCCCACATGGACAGCCAGGG...AGTAAGTTCTAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: VHVGTPSAISGKGMALCEEVFMP*LSMWEL
Trigger: GAGTTCCCACATGGACAGCCAGGGCATAAACACTTC...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGAGAAGGTTAAACCCGTaGTCATCTGAGACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKRRLNP*SSETGS
Trigger: GGAACCAGTCTCAGATGACCACGGGTTTAACCTTCT...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCCTTAGAACAATAATATaGCTATACAGGCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGLRTII*LYRPQL
Trigger: GAGCTGGGGCCTGTATAGCCATATTATTGTTCTAAG...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAGCTTTAAAGGGGACCTaGAAGGAATTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VGTPSAISGKGMALCECGALKGT*KEFLLR
Trigger: CCTCAGCAGGAATTCCTTCCAGGTCCCCTTTAAAGC...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCTTGGGGTCTCCTCACTaGGAGGGTCAAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLLGSPH*EGQGCI
Trigger: GATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAA...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGAAAAAGTGACCTGCCTTaGAGCCTTAGTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARKSDLP*SLSPSL
Trigger: AAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTT...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGGAGACCCGATCCCCTaGGAGCAGTGCCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SGKGMALCECGKKEVISQGDPIP*EQCQEL
Trigger: CAACTCCTGGCACTGCTCCCAGGGGATCGGGTCTCC...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGGAGGACGATGGGGGTaGGGACTGCTGTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPGGRWG*GLLCWE
Trigger: TTCCCAACACAGCAGTCCCCACCCCCATCGTCCTCC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGAGAGCTGGGGAGATTaGCTCGGAGCCAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDESWGD*LGASRA
Trigger: AGCTCTGCTGGCTCCGAGCCAATCTCCCCAGCTCTC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGCTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGAAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: APSWVKGLRVMIYVLELGRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCAGACATCCCCCTCTCTaGCTCCCTCCTAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPRHPPL*LPPRPK
Trigger: TTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCT...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAGTGGAAAGAAAGAAGTaGTCAGCCAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: VGTPSAISGKGMALCECGVERKK*SARTIF
Trigger: GAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCAC...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCAGGACACATGAATCCTaGGCTCCAGTGAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPRTHES*APVNLE
Trigger: TTCTAGATTCACTGGAGCTCAGGATTCATGTGTCCT...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGAGCTGTTGGGGCGTATaGGGTCTGGAGTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLSCWGV*GLECKR
Trigger: CCTCTTGCACTCCAGACCTCATACGCCCCAACAGCT...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCCACTCCACGTTTTTCTaGAAAAATCTAGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPHSTFF*KNLDRP
Trigger: GGGCCTGTCTAGATTTTTTCAGAAAAACGTGGAGTG...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGGATGGAGAGGCAGGCTaGGTCACGTGGGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRDGEAG*VTWGPG
Trigger: ACCGGGCCCCCACGTGACTCAGCCTGCCTCTCCATC...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575082.5
ENST00000638377.1
CDS-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLVPQHS*PCSDPA
Trigger: AGCTGGGTCACTACATGGCCATGAATGCTGAGGGAC...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCATCCAGAGAAAAGGCTaGCAGCATGCCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSIQRKG*QHAWVP
Trigger: TGGAACCCAGGCATGCTGCCAGCCTTTTCTCTGGAT...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATTTATGAATCATAGCTaGGTCTTTTCCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAFMNHS*VFSRTH
Trigger: ATGAGTTCTGGAAAAGACCCAGCTATGATTCATAAA...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGCTTTAAAGGGGACCTaGAAGGAATTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MWELPAPSQEKAWRCVSVALKGT*KEFLLR
Trigger: CCTCAGCAGGAATTCCTTCCAGGTCCCCTTTAAAGC...CACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAATTGGGGTCTCCTCACTaGGAGGGTCAAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: TPSAISGKGMALCECGKKLGSPH*EGQGCI
Trigger: GATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAA...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCAGCAGTGCCAGGAGTTaGGTGGAGACTGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPSSARS*VETEWG
Trigger: ACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCT...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGAGCAGTGCCAGGAGTTaGGTGGAGACTGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLSSARS*VETEWG
Trigger: ACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCT...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAAAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCAACCAGGGGTCCATCTaGGTCAATGACAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGNQGSI*VNDRGL
Trigger: CAGGCCTCTGTCATTGACTCAGATGGACCCCTGGTT...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACAAACCCGTGGTCATCTaGGACTGGTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDKPVVI*DWFRFR
Trigger: CCTGAACCGGAACCAGTCTCAGATGACCACGGGTTT...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTACCAGCTTCCCTACTATaGGCCAGGGATCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLPASLL*ARDPSK
Trigger: TTTGGAAGGATCCCTGGCTCATAGTAGGGAAGCTGG...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCACGATGCCTTTGAGCTaGGGCTCAAGGATATGGGGG +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPTMPLS*GSRIWG
Trigger: CCCCCATATCCTTGAGCCTCAGCTCAAAGGCATCGT...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575082.5
ENST00000638377.1
CDS-3UTR TCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGACGATGCCTTTGAGCTaGGGCTCAAGGATATGGGGG +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLTMPLS*GSRIWG
Trigger: CCCCCATATCCTTGAGCCTCAGCTCAAAGGCATCGT...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575082.5
ENST00000638377.1
CDS-3UTR TCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTTGGCAGCAGCAAATTaGCCACAGGGTAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPLAAAN*PQGRGS
Trigger: AGAGCCCCTACCCTGTGGTCAATTTGCTGCTGCCAA...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR GCA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPLAHWE*REPPVQ
Trigger: CTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAG...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGAACTTACTGGTGGGAAGTGTTTATaGCCTGGCTGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SSVIGITQEGGRVGLELTGGKCL*PGCPCG
Trigger: CCCACATGGACAGCCAGGGCATAAACACTTCCCACC...AGTAAGTTCTAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGAAAAAGGCTGGCAGCATaGCTGGGTTCCAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: APSWVKGLRVMIYVLELGKRLAA*LGSSTE
Trigger: CTCTGTGCTGGAACCCAGGCATGCTGCCAGCCTTTT...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGAATGCAGGTTCAGTCATaGCATAATTTTGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARMQVQS*HNFDPS
Trigger: GGAGGGGTCAAAATTATGGCATGACTGAACCTGCAT...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTAGCTTGGGCAGAAAGTaGGCAGCTGCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSSLGRK*AAALVF
Trigger: GAAGACCAAGGCAGCTGCCCACTTTCTGCCCAAGCT...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CCA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTGCCTCGGGGACACTGTaGAGAGAAGGCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPASGTL*REGSWY
Trigger: GTACCAGGAGCCTTCTCTCCACAGTGTCCCCGAGGC...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATTTTATGAATCATAGCTaGGTCTTTTCCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHFMNHS*VFSRTH
Trigger: ATGAGTTCTGGAAAAGACCCAGCTATGATTCATAAA...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAATGGCACGACCTCAGCTaGGTTGAAGGAGCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: TPSAISGKGMALCECGKKWHDLS*VEGARN
Trigger: GTTTCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCA...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGTTGGGGTCTCCTCACTaGGAGGGTCAAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLLGSPH*EGQGCI
Trigger: GATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAA...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCGACTTATTGCTGAATTaGGGTCTCCTCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLDLLLN*GLLTGR
Trigger: CCTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTC...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGTGCCAGGAGTTGGGTaGAGACTGAGTGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDVPGVG*RLSGVC
Trigger: ACAAACCCCACTCAGTCTCCACCCAACTCCTGGCAC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACAGCTGCAGAAATCCTTaGGGTGACCCAGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDSCRNP*GDPGIW
Trigger: CCAGATGCCTGGGTCACCCCAAGGATTTCTGCAGCT...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGTCCTACTCAGAGGGTaGGCTGCGGATTGTACCACT +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPVLLRG*AADCTT
Trigger: AGTGGTACAATCCGCAGCCCACCCTCTGAGTAGGAC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCAGCGACACTCAGCTGTaGAATGCGGCGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGSDTQL*NAANCR
Trigger: TCTACAGTTCGCCGCATTTCACAGCTGAGTGTCGCT...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTCTCGGTTTCCCTTCATaGCCTGGCCCTCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPLGFPS*PGPPCP
Trigger: TGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAG...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSRHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGATGGCTCAGTGGCAATaGAAAGGGGCACAGGACTCC +
Preference number: 4 (lower is better)
Translates to: SGKGMALCECGKKEVISQMAQWQ*KGAQDS
Trigger: GGAGTCCTGTGCCCCTTTTCATTGCCACTGAGCCAT...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGTCCATCTGAGTCAATaGCAGAGGCCTGACAGATCC +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDVHLSQ*QRPDRS
Trigger: GGATCTGTCAGGCCTCTGTCATTGACTCAGATGGAC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTGTCCATCTGAGTCAATaGCAGAGGCCTGACAGATCC +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSVHLSQ*QRPDRS
Trigger: GGATCTGTCAGGCCTCTGTCATTGACTCAGATGGAC...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCCAGCTTCCCTACTATaGGCCAGGGATCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSPASLL*ARDPSK
Trigger: TTTGGAAGGATCCCTGGCTCATAGTAGGGAAGCTGG...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAAGGTGAGACTTATTGCTaGATTGGGGTCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQGETYC*IGVSSL
Trigger: CAGTGAGGAGACCCCAATTCAGCAATAAGTCTCACC...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAATACCCTATCCAAGTCTaGGGCTATGGAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQYPIQV*GYGSLP
Trigger: AGGGAGACTTCCATAGCCTCAGACTTGGATAGGGTA...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAAGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQEVFMP*LSMWEL
Trigger: GAGTTCCCACATGGACAGCCAGGGCATAAACACTTC...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCAGAAGGTTAAACCCGTaGTCATCTGAGACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSRRLNP*SSETGS
Trigger: GGAACCAGTCTCAGATGACCACGGGTTTAACCTTCT...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CTTCTCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTTGAAGGAGCTAGACTTAGAACAATAATATaGCTATACAGGCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLQTLSPWHDLSWVEGARLRTII*LYRPQL
Trigger: GAGCTGGGGCCTGTATAGCCATATTATTGTTCTAAG...TCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCTTTATGAATCATAGCTaGGTCTTTTCCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSFMNHS*VFSRTH
Trigger: ATGAGTTCTGGAAAAGACCCAGCTATGATTCATAAA...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGTTTATGAATCATAGCTaGGTCTTTTCCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: SPGSSARSWVETEWGLCGFMNHS*VFSRTH
Trigger: ATGAGTTCTGGAAAAGACCCAGCTATGATTCATAAA...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAAAAAGTGACCTGCCTTaGAGCCTTAGTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLKSDLP*SLSPSL
Trigger: AAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTT...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CAA 72 bp ACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTaGACCCCTCCCCCATCCCAGCTTCCCTACTATGAG +
Preference number: 4 (lower is better)
Translates to: TQHRCRFSHAII*TPPPSQLPYYE
Trigger: CTCATAGTAGGGAAGCTGGGATGGGGGAGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAAAGGCATGGCGTTGTGTaGGTGTGGAAAGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQRHGVV*VWKERS
Trigger: ACTTCTTTCTTTCCACACTCACACAACGCCATGCCT...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTAGGCCCAAAGCCAGAAGTGTTTTTATaGATCATAGCTGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: QPGPSSDIPLSDSLLGPKPEVFL*IIAGSF
Trigger: AAAAGACCCAGCTATGATTCATAAAAACACTTCTGG...CTTTGGGCCTAGGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACGGTGAGACTTATTGCTaGATTGGGGTCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDGETYC*IGVSSL
Trigger: CAGTGAGGAGACCCCAATTCAGCAATAAGTCTCACC...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTATGTAGGGGAGAAGGGTaGGACTTATTGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLCRGEG*DLLLNW
Trigger: CCAATTCAGCAATAAGTCTCACCCTTCTCCCCTACA...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTACCCTATCCAAGTCTaGGGCTATGGAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDYPIQV*GYGSLP
Trigger: AGGGAGACTTCCATAGCCTCAGACTTGGATAGGGTA...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGAACTTACTCAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: SSVIGITQEGGRVGLELTQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...AGTAAGTTCTAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp AGTTCTATCCAATTAGAAGCTGTTGGGGCGTATGAGGTCTGGAGTGCAAGAGGCCAGAAAGTGGGCAGCTaGCTTGGTCTTCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: SSIQLEAVGAYEVWSARGQKVGS*LGLLNS
Trigger: CGAGTTAAGAAGACCAAGGCAGCTGCCCACTTTCTG...GCCTCTTGCACTCCAGACCTCATACGCCCCAACAGCTTCTAATTGGATAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAATCCACCCAACACAGATaGAGGTTCAGTCATGCCATA +
Preference number: 4 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQSTQHR*RFSHAI
Trigger: TATGGCATGACTGAACCTGCATCTGTGTTGGGTGGA...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGGTGCAGAAGTGGCCCTaGCGAGGGTGTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRVQKWP*RGCPVF
Trigger: GAACACTGGACACCCTCGCCAGGGCCACTTCTGCAC...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCTTTGAGCTGAGGCTCTaGAGAGAGAGACATTCATCT +
Preference number: 4 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSFELRL*RERHSS
Trigger: AGATGAATGTCTCTCTCTCCAGAGCCTCAGCTCAAA...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGTGGAAAGAAAGAAGTaGTCAGCCAGGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPVERKK*SARTIF
Trigger: GAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCAC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR TCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAAGGACACATGAATCCTaGGCTCCAGTGAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: TPSAISGKGMALCECGKKRTHES*APVNLE
Trigger: TTCTAGATTCACTGGAGCTCAGGATTCATGTGTCCT...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGTGTAGGGGAGAAGGGTaGGACTTATTGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLCRGEG*DLLLNW
Trigger: CCAATTCAGCAATAAGTCTCACCCTTCTCCCCTACA...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTGTAGGGGAGAAGGGTaGGACTTATTGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPCRGEG*DLLLNW
Trigger: CCAATTCAGCAATAAGTCTCACCCTTCTCCCCTACA...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCCACCCAACACAGATaGAGGTTCAGTCATGCCATA +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPSTQHR*RFSHAI
Trigger: TATGGCATGACTGAACCTGCATCTGTGTTGGGTGGA...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTTCTCAGGAAAAGGCATaGCGTTGTGTGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSSQEKA*RCVSVE
Trigger: TTCCACACTCACACAACGCCATGCCTTTTCCTGAGA...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACAGAAGGTTAAACCCGTaGTCATCTGAGACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDRRLNP*SSETGS
Trigger: GGAACCAGTCTCAGATGACCACGGGTTTAACCTTCT...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGAGCAGTGCCAGGAGTTaGGTGGAGACTGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRSSARS*VETEWG
Trigger: ACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCT...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAATTTGAGCTGAGGCTCTaGAGAGAGAGACATTCATCA +
Preference number: 4 (lower is better)
Translates to: TPSAISGKGMALCECGKKFELRL*RERHSS
Trigger: TGATGAATGTCTCTCTCTCCAGAGCCTCAGCTCAAA...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575398.5
ENST00000638480.1
3UTR CAA 72 bp ACAGCTAGACAAGGCCCAAATCTAGCCTCTTTCTACTaGGAAACCAGGGGTCCATCTGAGTCAATGACAGAG +
Preference number: 4 (lower is better)
Translates to: TARQGPNLASFY*ETRGPSESMTE
Trigger: CTCTGTCATTGACTCAGATGGACCCCTGGTTTCCAAGTAGAAAGAGGCTAGATTTGGGCCTTGTCTAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CAA 72 bp ATTCAGGGGGAAGTACGGCTCCATAAAGCTCTAGAATaGGGTGTCTCTGGGATAAGAAGGTTAAACCCGTGG +
Preference number: 4 (lower is better)
Translates to: IQGEVRLHKALE*GVSGIRRLNPW
Trigger: CCACGGGTTTAACCTTCTTATCCCAGAGACACCCAATTCTAGAGCTTTATGGAGCCGTACTTCCCCCTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CAA 72 bp TCCAGACTCTGTCTCCCTGGCACGACCTCAGCTGGGTaGAAGGAGCTAGAAACTGCATGTAAAAATAAGCTT +
Preference number: 4 (lower is better)
Translates to: SRLCLPGTTSAG*KELETACKNKL
Trigger: AAGCTTATTTTTACATGCAGTTTCTAGCTCCTTCAACCCAGCTGAGGTCGTGCCAGGGAGACAGAGTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCCTTGGACAGCAGGATaGGGAGCTGCTTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRPWTAG*GAASGK
Trigger: TTTGCCAGAAGCAGCTCCTCATCCTGCTGTCCAAGG...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR GCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGAAAAGGCTGGCAGCATaGCTGGGTTCCAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRKRLAA*LGSSTE
Trigger: CTCTGTGCTGGAACCCAGGCATGCTGCCAGCCTTTT...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGAACTTACTATGCAGGTTCAGTCATaGCATAATTTTGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSVIGITQEGGRVGLELTMQVQS*HNFDPS
Trigger: GGAGGGGTCAAAATTATGGCATGACTGAACCTGCAT...AGTAAGTTCTAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCATGCAGGTTCAGTCATaGCATAATTTTGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPMQVQS*HNFDPS
Trigger: GGAGGGGTCAAAATTATGGCATGACTGAACCTGCAT...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGGGCATCTACTCCTCTTaGAACAAGCCAGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLGIYSS*NKPEVE
Trigger: TTCTACTTCTGGCTTGTTGCAAGAGGAGTAGATGCC...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGGCATCTACTCCTCTTaGAACAAGCCAGAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: CECGKKEVISQDHLQTSPGIYSS*NKPEVE
Trigger: TTCTACTTCTGGCTTGTTGCAAGAGGAGTAGATGCC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAACTTAGAACAATAATATaGCTATACAGGCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TPSAISGKGMALCECGKKLRTII*LYRPQL
Trigger: GAGCTGGGGCCTGTATAGCCATATTATTGTTCTAAG...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTGACTTATTGCTGAATTaGGGTCTCCTCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPDLLLN*GLLTGR
Trigger: CCTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTC...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTTTTGAGCTGAGGCTCTaGAGAGAGAGACATTCATCT +
Preference number: 4 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSFELRL*RERHSS
Trigger: AGATGAATGTCTCTCTCTCCAGAGCCTCAGCTCAAA...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR TCA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGCACTCCACGTTTTTCTaGAAAAATCTAGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: SGKGMALCECGKKEVISQHSTFF*KNLDRP
Trigger: GGGCCTGTCTAGATTTTTTCAGAAAAACGTGGAGTG...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGCTTAGAACAATAATATaGCTATACAGGCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLLRTII*LYRPQL
Trigger: GAGCTGGGGCCTGTATAGCCATATTATTGTTCTAAG...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGGAAGTGTTTATGCCCTaGCTGTCCATGTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: IIAGSFPELIRNRYHSRREVFMP*LSMWEL
Trigger: GAGTTCCCACATGGACAGCCAGGGCATAAACACTTC...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp CTTATTGCTGAATTGGGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTTGCCAGAAGTGTTTTTATaGATCATAGCTGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LIAELGSPHWEGQGCIHLPEVFL*IIAGSF
Trigger: AAAAGACCCAGCTATGATTCATAAAAACACTTCTGG...CAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCCCAATTCAGCAATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
3UTR CAA 72 bp GGGTCTCCTCACTGGGAGGGTCAAGGCTGTATCCATTaGTCCTTTTTATTAAGGACATATTACTCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: GSPHWEGQGCIH*SFLLRTYYSKD
Trigger: GTCCTTAGAGTAATATGTCCTTAATAAAAAGGACAAATGGATACAGCCTTGACCCTCCCAGTGAGGAGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR GCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGATGCAGGTTCAGTCATaGCATAATTTTGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRMQVQS*HNFDPS
Trigger: GGAGGGGTCAAAATTATGGCATGACTGAACCTGCAT...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTCCAGAAGTGTTTTTATaGATCATAGCTGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPPEVFL*IIAGSF
Trigger: AAAAGACCCAGCTATGATTCATAAAAACACTTCTGG...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR TCA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCCAGAAGTGTTTTTATaGATCATAGCTGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRPEVFL*IIAGSF
Trigger: AAAAGACCCAGCTATGATTCATAAAAACACTTCTGG...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS GCA 90 bp GCCGACACCGGCCGGCTGCCCCCGGGCTCGCGGACCTCCCGCTTCTaGCGGATCAGGCTACTGGCCAGCGCCGCCATAGCGCCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: ADTGRLPPGSRTSRF*RIRLLASAAIAPRE
Trigger: CTCCCGGGGCGCTATGGCGGCGCTGGCCAGTAGCCTGATCCGGCAGAAGCGGGAGGTCCGCGAGCCCGGGGGCAGCCGGCCGGTGTCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS GCA 90 bp TGGTGCCGCGGGGACACACGCGCCGCTGCGCCGACACCGGCCGGCTaGCCCCGGGCTCGCGGACCTCCCGCTTCTGCCGGATCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: WCRGDTRAAAPTPAG*PRARGPPASAGSGY
Trigger: GTAGCCTGATCCGGCAGAAGCGGGAGGTCCGCGAGCCCGGGGGCAGCCGGCCGGTGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGCACCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS GCA 90 bp TGCTTCTGGCAAAGGGACTTGGTGCCGCGGGGACACACGCGCCGCTaGGCCGACACCGGCCGGCTGCCCCCGGGCTCGCGGACCTCCCGC +
Preference number: 5 (lower is better)
Translates to: CFWQRDLVPRGHTRR*ADTGRLPPGSRTSR
Trigger: GCGGGAGGTCCGCGAGCCCGGGGGCAGCCGGCCGGTGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGCACCAAGTCCCTTTGCCAGAAGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS CCA 90 bp CCCCCGCACAGTCGCACCTTGGACAGCAGGATGAGGAGCTGCTTCTaGCAAAGGGACTTGGTGCCGCGGGGACACACGCGCCGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: PPHSRTLDSRMRSCF*QRDLVPRGHTRRCA
Trigger: GGCGCAGCGGCGCGTGTGTCCCCGCGGCACCAAGTCCCTTTGCCAGAAGCAGCTCCTCATCCTGCTGTCCAAGGTGCGACTGTGCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS CCA 90 bp GAGAGGCAGGCTGAGTCACGTGGGGGCCCGGTCCTACTCAGAGGGTaGGCTGCGGATTGTACCACTATGGGCAGCCGGTGGCGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: ERQAESRGGPVLLRG*AADCTTMGSRWRGE
Trigger: CTCCCCGCGCCACCGGCTGCCCATAGTGGTACAATCCGCAGCCCACCCTCTGAGTAGGACCGGGCCCCCACGTGACTCAGCCTGCCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGGGCGAGAGCCTTGCCTaGGCCCAGCGCCGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGGESLA*AQRRPV
Trigger: GACAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCC...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 90 bp TCGGAGTGGCGCGGGGGTTATGGGAGGGGTGCCCAGCTCCGTTCTTaGAGCGCAGGTCACAGGAGGAGGGCGCATAGAGGGCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SEWRGGYGRGAQLRS*SAGHRRRAHRGLAG
Trigger: GCCAGCCAGCCCTCTATGCGCCCTCCTCCTGTGACCTGCGCTTCAAGAACGGAGCTGGGCACCCCTCCCATAACCCCCGCGCCACTCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 90 bp CTACTCAGAGGGTGGGCTGCGGATTGTACCACTATGGGCAGCCGGTaGCGCGGGGAGGAGGGCGCGAGGTGGCTACCCTTAGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LLRGWAADCTTMGSR*RGEEGARWLPLGEL
Trigger: CAGCTCCCCTAAGGGTAGCCACCTCGCGCCCTCCTCCCCGCGCCACCGGCTGCCCATAGTGGTACAATCCGCAGCCCACCCTCTGAGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCGGCGAGAGCCTTGCCTaGGCCCAGCGCCGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGGESLA*AQRRPV
Trigger: GACAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCC...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS GCA 90 bp CCTACGGGACCCGATTTCGGAGTGGCGCGGGGGTTATGGGAGGGGTaGCCAGCTCCGTTCTTGAAGCGCAGGTCACAGGAGGAGGGCGCA +
Preference number: 5 (lower is better)
Translates to: PTGPDFGVARGLWEG*PAPFLKRRSQEEGA
Trigger: TGCGCCCTCCTCCTGTGACCTGCGCTTCAAGAACGGAGCTGGGCACCCCTCCCATAACCCCCGCGCCACTCCGAAATCGGGTCCCGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGCTTGGCGAGAGCCTaGCCTTGGCCCAGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSSLARA*PWPSAG
Trigger: GCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGCT...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 90 bp GGTGACCCAGGCATCTGGAAACCCCCGGGCCCCTCCGCTCCAGATTaGAAGAATCGCGAGAACCGGCACGTAGGCGGAGGACGATGGGGG +
Preference number: 5 (lower is better)
Translates to: GDPGIWKPPGPSAPD*KNRENRHVGGGRWG
Trigger: CCCCCATCGTCCTCCGCCTACGTGCCGGTTCTCGCGATTCTTTCAATCTGGAGCGGAGGGGCCCGGGGGTTTCCAGATGCCTGGGTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS GCA 90 bp CTGACTCAGCACCTGCTGCGGCTGCCGCTAGCTTGGCGAGAGCCTTaGCTTGGCCCAGCGCCGGCCTGTCTGACACTGACCCATCTGTCT +
Preference number: 5 (lower is better)
Translates to: LTQHLLRLPLAWREP*LGPAPACLTLTHLS
Trigger: AGACAGATGGGTCAGTGTCAGACAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCGCAGCAGGTGCTGAGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAATGACCTGGCCCTCCTaGTCCAGGCCGAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAMTWPS*SRPRYQ
Trigger: CTGGTACCTCGGCCTGGACAAGGAGGGCCAGGTCAT...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACGCGGCTGCCGCTAGCTaGGCGAGAGCCTTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNAAAAS*ARALPW
Trigger: CCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCGC...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 90 bp GTACGACCCCCGAGTCGGCGCCCATCTCTAGCCGTGAACTGTGTCTaGGTTCCTGCCAGCGTAGGGTCCCCTGAGCCTACGGGACCCGAT +
Preference number: 5 (lower is better)
Translates to: VRPPSRRPSLAVNCV*VPASVGSPEPTGPD
Trigger: ATCGGGTCCCGTAGGCTCAGGGGACCCTACGCTGGCAGGAACTCAGACACAGTTCACGGCTAGAGATGGGCGCCGACTCGGGGGTCGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCATGACCTGGCCCTCCTaGTCCAGGCCGAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCMTWPS*SRPRYQ
Trigger: CTGGTACCTCGGCCTGGACAAGGAGGGCCAGGTCAT...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCTCTGTCCTGTCCTGTaGATCCGGCGACGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYLCPVL*IRRRVA
Trigger: CGCCACCCGTCGCCGGATCAACAGGACAGGACAGAG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CAA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCAGTCTGGCAGGGACTTaGTCGTCCTGGCCCACCCCC +
Preference number: 5 (lower is better)
Translates to: GDRLWWWLAHWECREPPVSLAGT*SSWPTP
Trigger: GGGGGTGGGCCAGGACGACAAAGTCCCTGCCAGACT...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp CCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATAGGGTGGGCTGCGGATaGTACCACTATGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PLGSLRVEHLVGPGCSGHRVGCG*YHYGQP
Trigger: CGGCTGCCCATAGTGGTACAATCCGCAGCCCACCCT...ATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 90 bp GACACTGACCCATCTGTCTGTCTGTCTGTCTGTCTGTCAGTCCGCTaGCTCCCGGGGGCCCAGTTCTCCCTGAGGCTCAGCCTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: DTDPSVCLSVCLSVR*LPGAQFSLRLSLSP
Trigger: AGGGGAGAGGCTGAGCCTCAGGGAGAACTGGGCCCCCGGGAGCCAGCGGACTGACAGACAGACAGACAGACAGACAGATGGGTCAGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCTTCTGGCAAAGGGACTaGGTGCCGCGGGGACACACG +
Preference number: 5 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGFWQRD*VPRGHT
Trigger: CGTGTGTCCCCGCGGCACCAAGTCCCTTTGCCAGAA...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CAA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCACCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATGACCTGGCCCTCCTaGTCCAGGCCGAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYMTWPS*SRPRYQ
Trigger: CTGGTACCTCGGCCTGGACAAGGAGGGCCAGGTCAT...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCATGACCTGGCCCTCCTaGTCCAGGCCGAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGMTWPS*SRPRYQ
Trigger: CTGGTACCTCGGCCTGGACAAGGAGGGCCAGGTCAT...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACTCTGTCCTGTCCTGTaGATCCGGCGACGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: LWWWLAHWECREPPVQGLLCPVL*IRRRVA
Trigger: CGCCACCCGTCGCCGGATCAACAGGACAGGACAGAG...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS-3UTR CAA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCTCCTCCCCCATCGCTaGCTCTCTGCCGACTTCCCT +
Preference number: 5 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYLLPHR*LSADFP
Trigger: AGGGAAGTCGGCAGAGAGCAAGCGATGGGGGAGGAG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp CAGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACAGGGTGGGCTGCGGATaGTACCACTATGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: QDWETGCGGGWLTGSAGNRVGCG*YHYGQP
Trigger: CGGCTGCCCATAGTGGTACAATCCGCAGCCCACCCT...GTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 90 bp TCTAGCCGTGAACTGTGTCTGAGTTCCTGCCAGCGTAGGGTCCCCTaGGCCTACGGGACCCGATTTCGGAGTGGCGCGGGGGTTATGGGA +
Preference number: 5 (lower is better)
Translates to: SSRELCLSSCQRRVP*AYGTRFRSGAGVMG
Trigger: TCCCATAACCCCCGCGCCACTCCGAAATCGGGTCCCGTAGGCTCAGGGGACCCTACGCTGGCAGGAACTCAGACACAGTTCACGGCTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 90 bp GAGCGGGCGGGAGCAGGGCCAGAGGGACTCCCTGACTGTCGTACATaGACGGGGACCAATTCTAACTCTCACAACTCTCCTCCCCCATCG +
Preference number: 5 (lower is better)
Translates to: ERAGAGPEGLPDCRT*TGTNSNSHNSPPPS
Trigger: CGATGGGGGAGGAGAGTTGTGAGAGTTAGAATTGGTCCCCGTCCATGTACGACAGTCAGGGAGTCCCTCTGGCCCTGCTCCCGCCCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp GCTGGAGTGGAGACCCGATCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTCCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: AGVETRSPGSSARSWVETPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...AGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGATCGGGTCTCCACTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CAA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGCCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTAGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LWWWLAHWECREPPVQGLGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCCCCCTCCGCTCCAGATaGAAAGAATCGCGAGAACCG +
Preference number: 5 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLPLRSR*KESREP
Trigger: CGGTTCTCGCGATTCTTTCAATCTGGAGCGGAGGGG...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTTGCCCAGCTCCGTTCTaGAAGCGCAGGTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCCPAPF*KRRSQE
Trigger: CTCCTGTGACCTGCGCTTCAAGAACGGAGCTGGGCA...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGGAAGGGGCAGCGTGTTaGCGAAGGTGGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQEGAAC*RRWGIL
Trigger: CAAGATCCCCCACCTTCGCAAACACGCTGCCCCTTC...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 90 bp GCAAGGAGTGGGGACTGGAGAGACCCTAGAGGAGCTGGTCTGGAATaGGCAGCGATGACAGGCCATCAGCAAAGCTGGAGGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: ARSGDWRDPRGAGLE*AAMTGHQQSWREES
Trigger: GGACTCCTCCCTCCAGCTTTGCTGATGGCCTGTCATCGCTGCCCATTCCAGACCAGCTCCTCTAGGGTCTCTCCAGTCCCCACTCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576328.1
ENST00000640825.1
CDS-3UTR CAA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp AGGACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCCCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RTGRQVVVVAGSLGVQGTPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...GGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCAGCTTGGCGAGAGCCTaGCCTTGGCCCAGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLSLARA*PWPSAG
Trigger: GCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGCT...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 90 bp GGGACTGGAGAGACCCTAGAGGAGCTGGTCTGGAATGGGCAGCGATaGCAGGCCATCAGCAAAGCTGGAGGGAGGAGTCCCGGGCAAAAT +
Preference number: 5 (lower is better)
Translates to: GTGETLEELVWNGQR*QAISKAGGRSPGQN
Trigger: ATTTTGCCCGGGACTCCTCCCTCCAGCTTTGCTGATGGCCTGTCATCGCTGCCCATTCCAGACCAGCTCCTCTAGGGTCTCTCCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576328.1
ENST00000640825.1
CDS-3UTR CAA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTTCTGGCAAAGGGACTaGGTGCCGCGGGGACACACG +
Preference number: 5 (lower is better)
Translates to: VHVGTPSAISGKGMALCEFWQRD*VPRGHT
Trigger: CGTGTGTCCCCGCGGCACCAAGTCCCTTTGCCAGAA...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CAA 90 bp GCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCAAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: APRLPQGRAPSGTWLLRAKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...TGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGAGTCATGCCATAATTTaGACCCCTCCCCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: SAPRLPQGRAPSGTWLLRSHAII*TPPPSQ
Trigger: CTGGGATGGGGGAGGGGTCAAAATTATGGCATGACT...CCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCGCGGCTGCCGCTAGCTaGGCGAGAGCCTTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLAAAAS*ARALPW
Trigger: CCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCGC...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp TTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTATGGCGGCAGAACAGTTaGGTGACGATGCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: LWWWLAHWECREPPVQGLWRQNS*VTMPLS
Trigger: GCTCAAAGGCATCGTCACCAAACTGTTCTGCCGCCA...TAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp CACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: HSQPLGSLRVEHLVGPGCKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...GCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp ATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: MWELPAPSQEKAWRCVSVGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...CACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTACGACCTCAGCTGGGTaGAAGGAGCTAGAAACTGCA +
Preference number: 5 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCTTSAG*KELETA
Trigger: TGCAGTTTCTAGCTCCTTCAACCCAGCTGAGGTCGT...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTAGTCATGCCATAATTTaGACCCCTCCCCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: GRQVVVVAGSLGVQGTSSSHAII*TPPPSQ
Trigger: CTGGGATGGGGGAGGGGTCAAAATTATGGCATGACT...ACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCAGTCTGGCAGGGACTTaGTCGTCCTGGCCCACCCCC +
Preference number: 5 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLSLAGT*SSWPTP
Trigger: GGGGGTGGGCCAGGACGACAAAGTCCCTGCCAGACT...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp CAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGCCTCAAGCCTTCCCCTaGACCTCGAAAATAAGGAGA +
Preference number: 5 (lower is better)
Translates to: QVVVVAGSLGVQGTSSPGPQAFP*TSKIRR
Trigger: TCTCCTTATTTTCGAGGTCAAGGGGAAGGCTTGAGG...CCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGACCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VGTPSAISGKGMALCECGPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CAA 90 bp TCCCCTGGGAGCAGTGCCAGGAGTTGGGTGGAGACTGAGTGGGGTTTGTGTGGGAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: SPGSSARSWVETEWGLCGKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...CCCACACAAACCCCACTCAGTCTCCACCCAACTCCTGGCACTGCTCCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCTAGCCTCTTTCTACTaGGAAACCAGGGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: GDRLWWWLAHWECREPPVLASFY*ETRGPS
Trigger: AGATGGACCCCTGGTTTCCAAGTAGAAAGAGGCTAG...GACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCAGACTTATTGCTGAATaGGGGTCTCCTCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGRLIAE*GSPHWE
Trigger: CTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTCT...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTAGACTTATTGCTGAATaGGGGTCTCCTCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCRLIAE*GSPHWE
Trigger: CTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTCT...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGAGACTTATTGCTGAATaGGGGTCTCCTCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQRLIAE*GSPHWE
Trigger: CTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTCT...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCCCTCAAGCCTTCCCCTaGACCTCGAAAATAAGGAGA +
Preference number: 5 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGPQAFP*TSKIRR
Trigger: TCTCCTTATTTTCGAGGTCAAGGGGAAGGCTTGAGG...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp ACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAACCGCACAGTCGCACCTaGGACAGCAGGATGAGGAGC +
Preference number: 5 (lower is better)
Translates to: TPSAISGKGMALCECGKKPHSRT*DSRMRS
Trigger: GCTCCTCATCCTGCTGTCCAAGGTGCGACTGTGCGG...TTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CAA 90 bp TGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACATAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: WWWLAHWECREPPVQGLHKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...ATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp CTCGGAAGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGAAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: LGSHSQPLGSLRVEHLVGKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...TCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACTTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: FQNSSVIGITQEGGRVGLGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...TAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp AGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCTCAGCCCTAGCCTCTTTCTACTaGGAAACCAGGGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: RKSDLPWSLSPSLRAPSALASFY*ETRGPS
Trigger: AGATGGACCCCTGGTTTCCAAGTAGAAAGAGGCTAG...GGCTGAGGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp CAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCGAAACATTCCTACACTaGGCAGGATTAGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: QSAPRLPQGRAPSGTWLLETFLH*AGLEGR
Trigger: TCTTCCCTCTAATCCTGCCAAGTGTAGGAATGTTTC...GAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCCCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TCATCCGTAATAGGTATCACTCAAGAAGGCGGGAGGGTGGGGCTAGAACTTACTGGACTGGGAGACAGGTaGTGGTGGTGGCTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: SSVIGITQEGGRVGLELTGLGDR*WWWLAH
Trigger: GTGAGCCAGCCACCACCACAACCTGTCTCCCAGTCC...AGTAAGTTCTAGCCCCACCCTCCCGCCTTCTTGAGTGATACCTATTACGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGAGTCATGCCATAATTTaGACCCCTCCCCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: VHVGTPSAISGKGMALCESHAII*TPPPSQ
Trigger: CTGGGATGGGGGAGGGGTCAAAATTATGGCATGACT...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCCCCCTCCGCTCCAGATaGAAAGAATCGCGAGAACCG +
Preference number: 5 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSPLRSR*KESREP
Trigger: CGGTTCTCGCGATTCTTTCAATCTGGAGCGGAGGGG...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCGAAACATTCCTACACTaGGCAGGATTAGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGETFLH*AGLEGR
Trigger: TCTTCCCTCTAATCCTGCCAAGTGTAGGAATGTTTC...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGCCGCACAGTCGCACCTaGGACAGCAGGATGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SGKGMALCECGKKEVISQPHSRT*DSRMRS
Trigger: GCTCCTCATCCTGCTGTCCAAGGTGCGACTGTGCGG...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS-3UTR CAA 90 bp GTCCATGTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGCTAGCCTCTTTCTACTaGGAAACCAGGGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: VHVGTPSAISGKGMALCELASFY*ETRGPS
Trigger: AGATGGACCCCTGGTTTCCAAGTAGAAAGAGGCTAG...CTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCACATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GTGGGAACTCCCAGCGCCATCTCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGACTAGCCTCTTTCTACTaGGAAACCAGGGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: VGTPSAISGKGMALCECGLASFY*ETRGPS
Trigger: AGATGGACCCCTGGTTTCCAAGTAGAAAGAGGCTAG...TCCACACTCACACAACGCCATGCCTTTTCCTGAGATGGCGCTGGGAGTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp TGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCAGTCCAGGGACTACCATAAAGCTCTAGAATaGGGTGTCTCTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: CGGGWLTGSAGNLQSRDYHKALE*GVSGIR
Trigger: TCTTATCCCAGAGACACCCAATTCTAGAGCTTTATG...GTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTCATAAAGCTCTAGAATaGGGTGTCTCTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCHKALE*GVSGIR
Trigger: TCTTATCCCAGAGACACCCAATTCTAGAGCTTTATG...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp CCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCAGCATAAAGCTCTAGAATaGGGTGTCTCTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: PQGRAPSGTWLLRACVWQHKALE*GVSGIR
Trigger: TCTTATCCCAGAGACACCCAATTCTAGAGCTTTATG...CTGCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCGAAGGGGCAGCGTGTTaGCGAAGGTGGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: CECGKKEVISQDHLQTSPEGAAC*RRWGIL
Trigger: CAAGATCCCCCACCTTCGCAAACACGCTGCCCCTTC...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 90 bp CTCCAAGCACGCTCTCTCCCACCTCTCTTTCACTCCTGGGAAAGCTaGTGTGGGTCCCTTCTGTTTCCTATAACCAGGAGCTTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LQARSLPPLFHSWES*CGSLLFPITRSFQC
Trigger: ACACTGAAAGCTCCTGGTTATAGGAAACAGAAGGGACCCACACCAGCTTTCCCAGGAGTGAAAGAGAGGTGGGAGAGAGCGTGCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp TGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACCCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WKERSDQPGPSSDIPLSDPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...GTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTATGACCTGGCCCTCCTaGTCCAGGCCGAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPMTWPS*SRPRYQ
Trigger: CTGGTACCTCGGCCTGGACAAGGAGGGCCAGGTCAT...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGAGAGACATTCATCTTaGAAAATGACATCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: GSLRVEHLVGPGCSGHVCERHSS*KMTSPF
Trigger: GAACGGAGATGTCATTTTCAAAGATGAATGTCTCTC...ACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp ACTGGGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTGCAGGGAACCTCCGAGAGACATTCATCTTaGAAAATGACATCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: TGRQVVVVAGSLGVQGTSERHSS*KMTSPF
Trigger: GAACGGAGATGTCATTTTCAAAGATGAATGTCTCTC...GGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS-3UTR CAA 90 bp TCAGGAAAAGGCATGGCGTTGTGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGCCCACAGGGATCAGGTaGAAGTGGGTGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SGKGMALCECGKKEVISQPTGIR*KWVKEL
Trigger: CAGCTCCTTCACCCACTTCAACCTGATCCCTGTGGG...CTGGCTGATCACTTCTTTCTTTCCACACTCACACAACGCCATGCCTTTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
CDS-3UTR CAA 90 bp AAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: KEVISQDHLQTSPSLTPSKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...GGAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000639021.2
ENST00000640112.1
CDS-3UTR CAA 90 bp GGGATAAGAAGGTTAAACCCGTGGTCATCTGAGACTGGTTCCGGTTCAGGCCAAACGACCTCAGCTGGGTaGAAGGAGCTAGAAACTGCA +
Preference number: 5 (lower is better)
Translates to: GIRRLNPWSSETGSGSGQTTSAG*KELETA
Trigger: TGCAGTTTCTAGCTCCTTCAACCCAGCTGAGGTCGT...TTGGCCTGAACCGGAACCAGTCTCAGATGACCACGGGTTTAACCTTCTTATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp AGTCACAGTCAGCCCCTAGGCTCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCCAAGGCTGTATCCATTaGTCCTTTTTATTAAGGACA +
Preference number: 5 (lower is better)
Translates to: SHSQPLGSLRVEHLVGPGQGCIH*SFLLRT
Trigger: TGTCCTTAATAAAAAGGACAAATGGATACAGCCTTG...GCCAGGTCCCACTAGGTGCTCTACCCTGAGGGAGCCTAGGGGCTGACTGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp TCCCTCAGGGTAGAGCACCTAGTGGGACCTGGCTGCTCAGGGCATGTGTGTGGCCAAGGCTGTATCCATTaGTCCTTTTTATTAAGGACA +
Preference number: 5 (lower is better)
Translates to: SLRVEHLVGPGCSGHVCGQGCIH*SFLLRT
Trigger: TGTCCTTAATAAAAAGGACAAATGGATACAGCCTTG...GCCACACACATGCCCTGAGCAGCCAGGTCCCACTAGGTGCTCTACCCTGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGATGACCTGGCCCTCCTaGTCCAGGCCGAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRMTWPS*SRPRYQ
Trigger: CTGGTACCTCGGCCTGGACAAGGAGGGCCAGGTCAT...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTACGACCTCAGCTGGGTaGAAGGAGCTAGAAACTGCA +
Preference number: 5 (lower is better)
Translates to: ECGKKEVISQDHLQTSPSTTSAG*KELETA
Trigger: TGCAGTTTCTAGCTCCTTCAACCCAGCTGAGGTCGT...AGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGAAGTCATGCCATAATTTaGACCCCTCCCCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: APSWVKGLRVMIYVLELGSHAII*TPPPSQ
Trigger: CTGGGATGGGGGAGGGGTCAAAATTATGGCATGACT...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GCTCCATCCTGGGTAAAAGGGCTGAGAGTCATGATCTATGTCCTAGAGCTAGGAAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: APSWVKGLRVMIYVLELGKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...TCCTAGCTCTAGGACATAGATCATGACTCTCAGCCCTTTTACCCAGGATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp AGCCTAAGGAAAAGTGACCTGCCTTGGAGCCTTAGTCCCTCCCTTAGGGCCCCCCAAGGCTGTATCCATTaGTCCTTTTTATTAAGGACA +
Preference number: 5 (lower is better)
Translates to: SLRKSDLPWSLSPSLRAPQGCIH*SFLLRT
Trigger: TGTCCTTAATAAAAAGGACAAATGGATACAGCCTTG...GGGGGCCCTAAGGGAGGGACTAAGGCTCCAAGGCAGGTCACTTTTCCTTAGGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp TTCATGTCCACCCAACACAGATGCAGGTTCAGTCATGCCATAATTTTGACCCCTAGACTTATTGCTGAATaGGGGTCTCCTCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: FMSTQHRCRFSHAIILTPRLIAE*GSPHWE
Trigger: CTCCCAGTGAGGAGACCCCAATTCAGCAATAAGTCT...AGGGGTCAAAATTATGGCATGACTGAACCTGCATCTGTGTTGGGTGGACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp TGTGAGTGTGGAAAGAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCCATAAAGCTCTAGAATaGGGTGTCTCTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: CECGKKEVISQDHLQTSPHKALE*GVSGIR
Trigger: TCTTATCCCAGAGACACCCAATTCTAGAGCTTTATG...GGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTCTTTCCACACTCACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGACGACCTCAGCTGGGTaGAAGGAGCTAGAAACTGCA +
Preference number: 5 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRTTSAG*KELETA
Trigger: TGCAGTTTCTAGCTCCTTCAACCCAGCTGAGGTCGT...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp GAAAGAAGTGATCAGCCAGGACCATCTTCAGACATCCCCCTCTCTGACTCCCTCCAAGGCTGTATCCATTaGTCCTTTTTATTAAGGACA +
Preference number: 5 (lower is better)
Translates to: ERSDQPGPSSDIPLSDSLQGCIH*SFLLRT
Trigger: TGTCCTTAATAAAAAGGACAAATGGATACAGCCTTG...GAGGGAGTCAGAGAGGGGGATGTCTGAAGATGGTCCTGGCTGATCACTTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS-3UTR CAA 90 bp ATCATAGCTGGGTCTTTTCCAGAACTCATCCGTAATAGGTATCACTCAAGAAGGAAGTGGGCAGCTGCCTaGGTCTTCTTAACTCGGTTT +
Preference number: 5 (lower is better)
Translates to: IIAGSFPELIRNRYHSRRKWAAA*VFLTRF
Trigger: AAACCGAGTTAAGAAGACCAAGGCAGCTGCCCACTT...CCTTCTTGAGTGATACCTATTACGGATGAGTTCTGGAAAAGACCCAGCTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293829.9
ENST00000575082.5
ENST00000638377.1
ENST00000639021.2
CDS GCA 72 bp CAAAGGGACTTGGTGCCGCGGGGACACACGCGCCGCTaGGCCGACACCGGCCGGCTGCCCCCGGGCTCGCGG +
Preference number: 6 (lower is better)
Translates to: QRDLVPRGHTRR*ADTGRLPPGSR
Trigger: CCGCGAGCCCGGGGGCAGCCGGCCGGTGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGCACCAAGTCCCTTTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS GCA 72 bp GGCCGGCTGCCCCCGGGCTCGCGGACCTCCCGCTTCTaGCGGATCAGGCTACTGGCCAGCGCCGCCATAGCG +
Preference number: 6 (lower is better)
Translates to: GRLPPGSRTSRF*RIRLLASAAIA
Trigger: CGCTATGGCGGCGCTGGCCAGTAGCCTGATCCGGCAGAAGCGGGAGGTCCGCGAGCCCGGGGGCAGCCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS CCA 72 bp CAGCAGAGCTCGACCAGGAGGAACCGAGCCCAGGCGTaGAGGAGCGGGAGAACCGGGGCAGGCGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: QQSSTRRNRAQA*RSGRTGAGGGW
Trigger: CCAGCCCCCGCCTGCCCCGGTTCTCCCGCTCCTCCACGCCTGGGCTCGGTTCCTCCTGGTCGAGCTCTGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 72 bp TCTGCAGAGCTCCCCGGTCCGGCGAAGTCAGAGCACTaGGCCGGTGGCTGGACCAGGCAGAGCGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: SAELPGPAKSEH*AGGWTRQSGGS
Trigger: GCTGCCGCCGCTCTGCCTGGTCCAGCCACCGGCCCAGTGCTCTGACTTCGCCGGACCGGGGAGCTCTGCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575235.5
ENST00000638657.1
CDS CAA 72 bp GACGCTGACTCAGCACCTGCTGCGGCTGCCGCTAGCTaGGCGAGAGCCTTGCCTTGGCCCAGCGCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: DADSAPAAAAAS*ARALPWPSAGL
Trigger: CAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCGCAGCAGGTGCTGAGTCAGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CAA 90 bp CGCACCTTGGACAGCAGGATGAGGAGCTGCTTCTGGCAAAGGGACTaGGTGCCGCGGGGACACACGCGCCGCTGCGCCGACACCGGCCGG +
Preference number: 6 (lower is better)
Translates to: RTLDSRMRSCFWQRD*VPRGHTRRCADTGR
Trigger: CCGGCCGGTGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGCACCAAGTCCCTTTGCCAGAAGCAGCTCCTCATCCTGCTGTCCAAGGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS GCA 72 bp GTCACGTGGGGGCCCGGTCCTACTCAGAGGGTGGGCTaGGGATTGTACCACTATGGGCAGCCGGTGGCGCGG +
Preference number: 6 (lower is better)
Translates to: VTWGPGPTQRVG*GLYHYGQPVAR
Trigger: CCGCGCCACCGGCTGCCCATAGTGGTACAATCCGCAGCCCACCCTCTGAGTAGGACCGGGCCCCCACGTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 72 bp ACGCTGACTCAGCACCTGCTGCGGCTGCCGCTAGCTTaGCGAGAGCCTTGCCTTGGCCCAGCGCCGGCCTGT +
Preference number: 6 (lower is better)
Translates to: TLTQHLLRLPLA*REPCLGPAPAC
Trigger: ACAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCGCAGCAGGTGCTGAGTCAGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CAA 72 bp TGGGGGCCCGGTCCTACTCAGAGGGTGGGCTGCGGATaGTACCACTATGGGCAGCCGGTGGCGCGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: WGPGPTQRVGCG*YHYGQPVARGG
Trigger: TCCTCCCCGCGCCACCGGCTGCCCATAGTGGTACAATCCGCAGCCCACCCTCTGAGTAGGACCGGGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 72 bp GCTGCGGCTGCCGCTAGCTTGGCGAGAGCCTTGCCTTaGCCCAGCGCCGGCCTGTCTGACACTGACCCATCT +
Preference number: 6 (lower is better)
Translates to: AAAAASLARALP*PSAGLSDTDPS
Trigger: AGATGGGTCAGTGTCAGACAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CAA 90 bp GCTGGCGAGGTAGCTGCAAGGACACCCGAGGGAGAGCTGGGGAGATaGGCTCGGAGCCAGCAGAGCTCGACCAGGAGGAACCGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: AGEVAARTPEGELGR*ARSQQSSTRRNRAQ
Trigger: CTGGGCTCGGTTCCTCCTGGTCGAGCTCTGCTGGCTCCGAGCCAATCTCCCCAGCTCTCCCTCGGGTGTCCTTGCAGCTACCTCGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CAA 90 bp GCTGACTCAGCACCTGCTGCGGCTGCCGCTAGCTTGGCGAGAGCCTaGCCTTGGCCCAGCGCCGGCCTGTCTGACACTGACCCATCTGTC +
Preference number: 6 (lower is better)
Translates to: ADSAPAAAAASLARA*PWPSAGLSDTDPSV
Trigger: GACAGATGGGTCAGTGTCAGACAGGCCGGCGCTGGGCCAAGGCAAGGCTCTCGCCAAGCTAGCGGCAGCCGCAGCAGGTGCTGAGTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 72 bp CCTACGGGACCCGATTTCGGAGTGGCGCGGGGGTTATaGGAGGGGTGCCCAGCTCCGTTCTTGAAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: PTGPDFGVARGL*EGCPAPFLKRR
Trigger: CCTGCGCTTCAAGAACGGAGCTGGGCACCCCTCCCATAACCCCCGCGCCACTCCGAAATCGGGTCCCGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 72 bp GCTGAGTCACGTGGGGGCCCGGTCCTACTCAGAGGGTaGGCTGCGGATTGTACCACTATGGGCAGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: AESRGGPVLLRG*AADCTTMGSRW
Trigger: CCACCGGCTGCCCATAGTGGTACAATCCGCAGCCCACCCTCTGAGTAGGACCGGGCCCCCACGTGACTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 72 bp GAACTGTGTCTGAGTTCCTGCCAGCGTAGGGTCCCCTaGGCCTACGGGACCCGATTTCGGAGTGGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: ELCLSSCQRRVP*AYGTRFRSGAG
Trigger: CCCCGCGCCACTCCGAAATCGGGTCCCGTAGGCTCAGGGGACCCTACGCTGGCAGGAACTCAGACACAGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS GCA 72 bp CCCGATTTCGGAGTGGCGCGGGGGTTATGGGAGGGGTaGCCAGCTCCGTTCTTGAAGCGCAGGTCACAGGAG +
Preference number: 6 (lower is better)
Translates to: PDFGVARGLWEG*PAPFLKRRSQE
Trigger: CTCCTGTGACCTGCGCTTCAAGAACGGAGCTGGGCACCCCTCCCATAACCCCCGCGCCACTCCGAAATCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 72 bp GGCATCTGGAAACCCCCGGGCCCCTCCGCTCCAGATTaGAAGAATCGCGAGAACCGGCACGTAGGCGGAGGA +
Preference number: 6 (lower is better)
Translates to: GIWKPPGPSAPD*KNRENRHVGGG
Trigger: TCCTCCGCCTACGTGCCGGTTCTCGCGATTCTTTCAATCTGGAGCGGAGGGGCCCGGGGGTTTCCAGATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 72 bp CCGAGTCGGCGCCCATCTCTAGCCGTGAACTGTGTCTaGGTTCCTGCCAGCGTAGGGTCCCCTGAGCCTACG +
Preference number: 6 (lower is better)
Translates to: PSRRPSLAVNCV*VPASVGSPEPT
Trigger: CGTAGGCTCAGGGGACCCTACGCTGGCAGGAACTCAGACACAGTTCACGGCTAGAGATGGGCGCCGACTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS GCA 72 bp CCGCACAGTCGCACCTTGGACAGCAGGATGAGGAGCTaGTTCTGGCAAAGGGACTTGGTGCCGCGGGGACAC +
Preference number: 6 (lower is better)
Translates to: PHSRTLDSRMRS*FWQRDLVPRGH
Trigger: GTGTCCCCGCGGCACCAAGTCCCTTTGCCAGAAGCAGCTCCTCATCCTGCTGTCCAAGGTGCGACTGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293829.9
ENST00000639021.2
CDS CCA 72 bp CCATCTGTCTGTCTGTCTGTCTGTCTGTCAGTCCGCTaGCTCCCGGGGGCCCAGTTCTCCCTGAGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PSVCLSVCLSVR*LPGAQFSLRLS
Trigger: GCTGAGCCTCAGGGAGAACTGGGCCCCCGGGAGCCAGCGGACTGACAGACAGACAGACAGACAGACAGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CAA 72 bp AGGCATCTGGAAACCCCCGGGCCCCTCCGCTCCAGATaGAAAGAATCGCGAGAACCGGCACGTAGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: RHLETPGPLRSR*KESREPARRRR
Trigger: CCTCCGCCTACGTGCCGGTTCTCGCGATTCTTTCAATCTGGAGCGGAGGGGCCCGGGGGTTTCCAGATGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 72 bp GAGACCCTAGAGGAGCTGGTCTGGAATGGGCAGCGATaGCAGGCCATCAGCAAAGCTGGAGGGAGGAGTCCC +
Preference number: 6 (lower is better)
Translates to: ETLEELVWNGQR*QAISKAGGRSP
Trigger: GGGACTCCTCCCTCCAGCTTTGCTGATGGCCTGTCATCGCTGCCCATTCCAGACCAGCTCCTCTAGGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576328.1
ENST00000640825.1
CDS TCA 72 bp TGTTTGCGAAGGTGGGGGATCTTGGCAGCAGCAAATTaGCCACAGGGTAGGGGCTCTCCCTCAGGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: CLRRWGILAAAN*PQGRGSPSGVG
Trigger: CCCCACTCCTGAGGGAGAGCCCCTACCCTGTGGTCAATTTGCTGCTGCCAAGATCCCCCACCTTCGCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS GCA 72 bp GGAGACAGGTTGTGGTGGTGGCTGGCTCACTGGGAGTaGAGGGAACCTCCAGTCCAGGGACTACATTTCAGG +
Preference number: 6 (lower is better)
Translates to: GDRLWWWLAHWE*REPPVQGLHFR
Trigger: CCTGAAATGTAGTCCCTGGACTGGAGGTTCCCTGCACTCCCAGTGAGCCAGCCACCACCACAACCTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS CCA 72 bp GATCAGGTTGAAGTGGGTGAAGGAGCTGGTATCCTCTaGGGTGCCCTGGATGCTTCCGTCGGGATTCGCCTG +
Preference number: 6 (lower is better)
Translates to: DQVEVGEGAGIL*GALDASVGIRL
Trigger: CAGGCGAATCCCGACGGAAGCATCCAGGGCACCCCAGAGGATACCAGCTCCTTCACCCACTTCAACCTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000576328.1
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
ENST00000640825.1
CDS CAA 72 bp TTCTTAACTCGGTTTCCCTTCATGACCTGGCCCTCCTaGTCCAGGCCGAGGTACCAGGCCCGGCCAGAACGA +
Preference number: 6 (lower is better)
Translates to: FLTRFPFMTWPS*SRPRYQARPER
Trigger: TCGTTCTGGCCGGGCCTGGTACCTCGGCCTGGACAAGGAGGGCCAGGTCATGAAGGGAAACCGAGTTAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS CCA 72 bp AATGCGGCGAACTGTAGAGCAGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCTTGGCGCTCTGGATGG +
Preference number: 6 (lower is better)
Translates to: NAANCRAVPQHS*PCSDPAWRSGW
Trigger: CCATCCAGAGCGCCAAGCTGGGTCACTACATGGCCATGAATGCTGAGGGACTGCTCTACAGTTCGCCGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293829.9
ENST00000572907.5
ENST00000575082.5
ENST00000575235.5
ENST00000575398.5
ENST00000638377.1
ENST00000638480.1
ENST00000638657.1
ENST00000639021.2
ENST00000640112.1
CDS CCA 72 bp GGAGCAGGGCCAGAGGGACTCCCTGACTGTCGTACATaGACGGGGACCAATTCTAACTCTCACAACTCTCCT +
Preference number: 6 (lower is better)
Translates to: GAGPEGLPDCRT*TGTNSNSHNSP
Trigger: AGGAGAGTTGTGAGAGTTAGAATTGGTCCCCGTCCATGTACGACAGTCAGGGAGTCCCTCTGGCCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CCA 72 bp GTCTCACCGAACTGTAGAGCAGTCCCTCAGCATTCATaGCCATGTAGTGACCCAGCTTGGCGCTCTGGATGG +
Preference number: 6 (lower is better)
Translates to: VSPNCRAVPQHS*PCSDPAWRSGW
Trigger: CCATCCAGAGCGCCAAGCTGGGTCACTACATGGCCATGAATGCTGAGGGACTGCTCTACAGTTCGGTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576328.1
ENST00000640825.1
CDS CAA 72 bp GGGGAGTCCCCAGTATTTCCCGGCCACTCAGCCTCATaGTCTCACCGAACTGTAGAGCAGTCCCTCAGCATT +
Preference number: 6 (lower is better)
Translates to: GESPVFPGHSAS*SHRTVEQSLSI
Trigger: AATGCTGAGGGACTGCTCTACAGTTCGGTGAGACAATGAGGCTGAGTGGCCGGGAAATACTGGGGACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576328.1
ENST00000640825.1
CDS CAA 90 bp ATTGAGGAAGGGGAGTCCCCAGTATTTCCCGGCCACTCAGCCTCATaGTCTCACCGAACTGTAGAGCAGTCCCTCAGCATTCATGGCCAT +
Preference number: 6 (lower is better)
Translates to: IEEGESPVFPGHSAS*SHRTVEQSLSIHGH
Trigger: ATGGCCATGAATGCTGAGGGACTGCTCTACAGTTCGGTGAGACAATGAGGCTGAGTGGCCGGGAAATACTGGGGACTCCCCTTCCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576328.1
ENST00000640825.1
CDS CCA 72 bp TCTCCCACCTCTCTTTCACTCCTGGGAAAGCTGGTGTaGGTCCCTTCTGTTTCCTATAACCAGGAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: SPTSLSLLGKLV*VPSVSYNQELS
Trigger: TGAAAGCTCCTGGTTATAGGAAACAGAAGGGACCCACACCAGCTTTCCCAGGAGTGAAAGAGAGGTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS TCA 72 bp TCTCACTATCCCCTATCCTGGATGACTCTAGGGAAGTaGGTAATGACAAAATCTGGAGGAGGTGGGATAAGA +
Preference number: 6 (lower is better)
Translates to: SHYPLSWMTLGK*VMTKSGGGGIR
Trigger: TCTTATCCCACCTCCTCCAGATTTTGTCATTACTCACTTCCCTAGAGTCATCCAGGATAGGGGATAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576328.1
ENST00000640825.1
CDS CCA 72 bp GAACAGTTTGGTGACGATGCCTTTGAGCTGAGGCTCTaGAGAGAGAGACATTCATCTTTGAAAATGACATCT +
Preference number: 6 (lower is better)
Translates to: EQFGDDAFELRL*RERHSSLKMTS
Trigger: AGATGTCATTTTCAAAGATGAATGTCTCTCTCTCCAGAGCCTCAGCTCAAAGGCATCGTCACCAAACTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1
CDS CAA 72 bp AAAATGACATCTCCGTTCCCAGAAACATTCCTACACTaGGCAGGATTAGAGGGAAGAAAGGAGAATGAAAGG +
Preference number: 6 (lower is better)
Translates to: KMTSPFPETFLH*AGLEGRKENER
Trigger: CCTTTCATTCTCCTTTCTTCCCTCTAATCCTGCCAAGTGTAGGAATGTTTCTGGGAACGGAGATGTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572907.5
ENST00000640112.1