RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000154783

Ensembl transcript IDs: ENST00000285046.10, ENST00000457774.1, ENST00000468662.5, ENST00000476851.1, ENST00000487605.1, ENST00000543601.5, ENST00000640506.1

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCCCCTTCCTATCTGGTaGGGCGCAGCCCCTCTAAAG +
Preference number: 2 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQPLPIW*GAAPLK
Trigger: CTTTAGAGGGGCTGCGCCCCACCAGATAGGAAGGGG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCAGGCCTCATTGCTaGATCCAGGTGTGTGTCCGG +
Preference number: 2 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQVRPHC*IQVCVR
Trigger: CCGGACACACACCTGGATTCAGCAATGAGGCCTGAC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGCAAGGGCAGGGGAGTaGTGGGGCGGTTATAGCAAA +
Preference number: 2 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQARAGE*WGGYSK
Trigger: TTTGCTATAACCGCCCCACCACTCCCCTGCCCTTGC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGAGGTGTGTGTCCGGATaGGTTGAGCCACAGCTTAGC +
Preference number: 2 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQRCVSG*VEPQLS
Trigger: GCTAAGCTGTGGCTCAACTCATCCGGACACACACCT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGAAAGTGATGTGTGCTTaGACACCAGCAAGCCACAGC +
Preference number: 2 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQKVMCA*TPASHS
Trigger: GCTGTGGCTTGCTGGTGTGCAAGCACACATCACTTT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGAAATAGTTTATTACTaGGTGGCGGGTGGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVEIVYY*VAGGGR
Trigger: CCTACCCCCACCCGCCACCCAGTAATAAACTATTTC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGTCAGGCCTCATTGCTaGATCCAGGTGTGTGTCCGG +
Preference number: 2 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSVRPHC*IQVCVR
Trigger: CCGGACACACACCTGGATTCAGCAATGAGGCCTGAC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCCCTTGTTAGAAAACTaGTGGCACATTAGTCCACAG +
Preference number: 2 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVPLLEN*WHISPQ
Trigger: CTGTGGACTAATGTGCCACCAGTTTTCTAACAAGGG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR CAA 90 bp AGCAAGCCACAGCCAGGTCTGCACAAATCCATTTTATGTACACCCTaGTTAGAAAACTGGTGGCACATTAGTCCACAGGATTCCATCTGT +
Preference number: 2 (lower is better)
Translates to: SKPQPGLHKSILCTP*LENWWHISPQDSIC
Trigger: ACAGATGGAATCCTGTGGACTAATGTGCCACCAGTTTTCTAACAAGGGTGTACATAAAATGGATTTGTGCAGACCTGGCTGTGGCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGCTTCTCATTTCACCTaGGGCACCACAATCAATTTT +
Preference number: 2 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVASHFT*GTTINF
Trigger: AAAATTGATTGTGGTGCCTCAGGTGAAATGAGAAGC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGCTTCTCATTTCACCTaGGGCACCACAATCAATTTT +
Preference number: 2 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQASHFT*GTTINF
Trigger: AAAATTGATTGTGGTGCCTCAGGTGAAATGAGAAGC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGAGCCACAGCCAGGTCTaGACAAATCCATTTTATGTA +
Preference number: 2 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQSHSQV*TNPFYV
Trigger: TACATAAAATGGATTTGTGCAGACCTGGCTGTGGCT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCAGCCACAGCCAGGTCTaGACAAATCCATTTTATGTA +
Preference number: 2 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVSHSQV*TNPFYV
Trigger: TACATAAAATGGATTTGTGCAGACCTGGCTGTGGCT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTTGTTAGAAAACTGGTaGCACATTAGTCCACAGGAT +
Preference number: 2 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQLLENW*HISPQD
Trigger: ATCCTGTGGACTAATGTGCCACCAGTTTTCTAACAA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGAAATAGTTTATTACTaGGTGGCGGGTGGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSEIVYY*VAGGGR
Trigger: CCTACCCCCACCCGCCACCCAGTAATAAACTATTTC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR GCA 72 bp CTGGTGGGGCGCAGCCCCTCTAAAGTGATGTGTGCTTaGACACCAGCAAGCCACAGCCAGGTCTGCACAAAT +
Preference number: 3 (lower is better)
Translates to: LVGRSPSKVMCA*TPASHSQVCTN
Trigger: ATTTGTGCAGACCTGGCTGTGGCTTGCTGGTGTGCAAGCACACATCACTTTAGAGGGGCTGCGCCCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCCATTCATGAAGATGTaGGCAAGGGCAGGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVPFMKM*ARAGEW
Trigger: CCACTCCCCTGCCCTTGCCAACATCTTCATGAATGG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTGTGTCCGGATGAGTaGAGCCACAGCTTAGCTTCT +
Preference number: 3 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQVCPDE*SHSLAS
Trigger: AGAAGCTAAGCTGTGGCTCAACTCATCCGGACACAC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGAAAGGTCAGGCCTCATaGCTGAATCCAGGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQKGQAS*LNPGVC
Trigger: ACACACACCTGGATTCAGCAATGAGGCCTGACCTTT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCAAAGGTCAGGCCTCATaGCTGAATCCAGGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVKGQAS*LNPGVC
Trigger: ACACACACCTGGATTCAGCAATGAGGCCTGACCTTT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGTGTGTCCGGATGAGTaGAGCCACAGCTTAGCTTCT +
Preference number: 3 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSVCPDE*SHSLAS
Trigger: AGAAGCTAAGCTGTGGCTCAACTCATCCGGACACAC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCATTTTATGTACACCCTaGTTAGAAAACTGGTGGCAC +
Preference number: 3 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVILCTP*LENWWH
Trigger: GTGCCACCAGTTTTCTAACAAGGGTGTACATAAAAT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCACACAAAATTGGAGGTaGCAGCTCCGTAAAATAATA +
Preference number: 3 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVTQNWR*QLRKII
Trigger: TATTATTTTACGGAGCTGCAACCTCCAATTTTGTGT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGACACAAAATTGGAGGTaGCAGCTCCGTAAAATAATA +
Preference number: 3 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQTQNWR*QLRKII
Trigger: TATTATTTTACGGAGCTGCAACCTCCAATTTTGTGT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR CCA 72 bp CACAAATCCATTTTATGTACACCCTTGTTAGAAAACTaGTGGCACATTAGTCCACAGGATTCCATCTGTTAT +
Preference number: 3 (lower is better)
Translates to: HKSILCTPLLEN*WHISPQDSICY
Trigger: ATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGTTTTCTAACAAGGGTGTACATAAAATGGATTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCCTGCTCAGCGCTCCTaGACCCGGAGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVPAQRS*TRSSRG
Trigger: GCCCCTGCTGCTCCGGGTGCAGGAGCGCTGAGCAGG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTCCAATGCCAGGGGCTaGCGAGCCCGCCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVSNARG*RARLRS
Trigger: GGACCTGAGGCGGGCTCGTCAGCCCCTGGCATTGGA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGATGACGCCGCAGGGTaGGGGAGAAGTCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVDDAAG*GRSRSR
Trigger: GCGGCTGCGACTTCTCCCTCACCCTGCGGCGTCATC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGCGTCCGATGCAGCCTaGCCTCCTTCTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQASDAA*PPSPGA
Trigger: GGCCCCTGGAGAAGGAGGGCAGGCTGCATCGGACGC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGCGTCCGATGCAGCCTaGCCTCCTTCTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVASDAA*PPSPGA
Trigger: GGCCCCTGGAGAAGGAGGGCAGGCTGCATCGGACGC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTGTGGCTGTCTCTaGCTCCTGGACCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQVCGCL*LLDPGQ
Trigger: CTGGCCGGGGTCCAGGAGGCAGAGACAGCCACAGAC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGGGGCCGGACCCTCGTaGTGGTGTTCTTCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQGAGPS*WCSSCP
Trigger: CGGACAGGAAGAACACCAGCACGAGGGTCCGGCCCC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCCGTGGCTTGGTCAGTaGCAAGGGCAGGAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQPWLGQ*QGQEGR
Trigger: CCGCCCTTCCTGCCCTTGCCACTGACCAAGCCACGG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGACCCTCCAGGCCACATaGCTCGCCTCCCTCTTCACG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQTLQAT*LASLFT
Trigger: CGTGAAGAGGGAGGCGAGGCATGTGGCCTGGAGGGT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTTCACGGACAGCAGCTaGCAGCCGGGGAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQFTDSS*QPGRVE
Trigger: CTCCACTCTCCCCGGCTGGCAGCTGCTGTCCGTGAA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCACCCGCAGCAGCCGATaGTTCGCAGTCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVTRSSR*FAVWLP
Trigger: AGGCAGCCAGACTGCGAAGCATCGGCTGCTGCGGGT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTGGAGGAGATCCCCTTaGCCCCGGACGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQWRRSP*PRTLCS
Trigger: TGAGCACAGCGTCCGGGGCCAAGGGGATCTCCTCCA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCAGCAGCAGGGGCCACTaGATCCTCACCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVSSRGH*ILTSSC
Trigger: ACAGGAGCTGGTGAGGATTCAGTGGCCCCTGCTGCT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGTGGTCATCCAACCCTaGCCCCTCAGGCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVVVIQP*PLRLLV
Trigger: TACCAGGAGCCTGAGGGGTCAGGGTTGGATGACCAC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTACTGGAAGAGGCGTTaGACCACCCGCAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVYWKRR*TTRSSR
Trigger: TCGGCTGCTGCGGGTGGTTCAACGCCTCTTCCAGTA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCTCTTTGGGGGCTaGCGACGAGATGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQVLFGG*RRDGTD
Trigger: GTCTGTCCCATCTCGTCGGCAGCCCCCAAAGAGGAC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTGGCCCCGGACGCTGTaGTCAATGTGGACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQWPRTL*SMWTSF
Trigger: GAAGCTGGTCCACATTGAGCACAGCGTCCGGGGCCA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTGGCCCCGGACGCTGTaGTCAATGTGGACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVWPRTL*SMWTSF
Trigger: GAAGCTGGTCCACATTGAGCACAGCGTCCGGGGCCA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCACGCTATGGTGGAATaGAGCCAGCGCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQHAMVE*SQRLGL
Trigger: AAGGCCCAGGCGCTGGCTGCATTCCACCATAGCGTG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCCCCTTCCTATCTGGTaGGGCGCAGCCCCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVPLPIW*GAAPLK
Trigger: CTTTAGAGGGGCTGCGCCCCACCAGATAGGAAGGGG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGGTCAGGTGGTTCACTaGGGTCAACCTGTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVGQVVH*GQPVPH
Trigger: GTGGGGAACAGGTTGACCTCAGTGAACCACCTGACC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGGTCAGGTGGTTCACTaGGGTCAACCTGTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQGQVVH*GQPVPH
Trigger: GTGGGGAACAGGTTGACCTCAGTGAACCACCTGACC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGCTGAGGGGAGTTGCTaGGGCTTCTCCGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQAEGSC*GFSGQL
Trigger: AAGTTGACCGGAGAAGCCTCAGCAACTCCCCTCAGC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGCTGAGGGGAGTTGCTaGGGCTTCTCCGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVAEGSC*GFSGQL
Trigger: AAGTTGACCGGAGAAGCCTCAGCAACTCCCCTCAGC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGACACTGGGGTCTCTTaGAGCACTGTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVDTGVS*STVLLL
Trigger: GAGGAGGAGGACAGTGCTTCAAGAGACCCCAGTGTC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGCAGTTCCTGTGCGATaGCAAGGGCTCTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVAVPVR*QGLWTV
Trigger: GACAGTCCAGAGCCCTTGTCATCGCACAGGAACTGC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACCTGCTCAGCGCTCCTaGACCCGGAGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSPAQRS*TRSSRG
Trigger: GCCCCTGCTGCTCCGGGTGCAGGAGCGCTGAGCAGG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCCTCAGGGAGGGCTCTaGTCAGACAGCCATACCACT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQPQGGL*SDSHTT
Trigger: AGTGGTATGGCTGTCTGAGCAGAGCCCTCCCTGAGG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCACAGCGGGAAGCTCATaGTCACAGGCCGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVTAGSS*SQAALS
Trigger: TGAGAGAGCGGCCTGTGAGCATGAGCTTCCCGCTGT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCGGATGAAAAGGCACTaGCCGAGAAGCGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVRMKRH*PRSGVK
Trigger: CTTCACCCCGCTTCTCGGGCAGTGCCTTTTCATCCG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCCCTCAGCGGAACCCTaGGGACCACGATGTAATCCT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQPSAEP*GPRCNP
Trigger: AGGATTACATCGTGGTCCCCAGGGTTCCGCTGAGGG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGACCCCTCAGGCTCCTaGTACACGGACACTGGAATC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVDPSGS*YTDTGI
Trigger: GATTCCAGTGTCCGTGTACCAGGAGCCTGAGGGGTC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGACCCCTCAGGCTCCTaGTACACGGACACTGGAATC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQDPSGS*YTDTGI
Trigger: GATTCCAGTGTCCGTGTACCAGGAGCCTGAGGGGTC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGGGCTGCCGACGAGATaGGACAGACTTTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVGLPTR*DRLCRA
Trigger: AGCCCTACAAAGTCTGTCCCATCTCGTCGGCAGCCC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGAAGGTCGTGGATGGCTaGGAGTTCACTCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQKVVDG*EFTQAL
Trigger: CAGGGCCTGAGTGAACTCCCAGCCATCCACGACCTT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCATCTCCACGCTATGGTaGAATGCAGCCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVISTLW*NAASAW
Trigger: CCAGGCGCTGGCTGCATTCCACCATAGCGTGGAGAT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCGTATCTCCACGCTATaGTGGAATGCAGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVRISTL*WNAASA
Trigger: GGCGCTGGCTGCATTCCACCATAGCGTGGAGATACG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGCAAGGGCAGGGGAGTaGTGGGGCGGTTATAGCAAA +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVARAGE*WGGYSK
Trigger: TTTGCTATAACCGCCCCACCACTCCCCTGCCCTTGC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATCCAATGCCAGGGGCTaGCGAGCCCGCCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSSNARG*RARLRS
Trigger: GGACCTGAGGCGGGCTCGTCAGCCCCTGGCATTGGA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGGGCTTCCCCTCCAATaGCAAAAGCGTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQGLPLQ*QKRLSH
Trigger: GTGGGAAAGACGCTTTTGTCATTGGAGGGGAAGCCC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCTTCCACCTTGTGGGTaGCACTGGGGTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQLPPCG*HWGLLK
Trigger: CTTCAAGAGACCCCAGTGTCACCCACAAGGTGGAAG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCTGGCTCTCCCAATTTaGCAGCCTTTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVLALPI*QPFLQL
Trigger: GAGCTGGAGGAAAGGCTGTCAAATTGGGAGAGCCAG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCTGGCTCTCCCAATTTaGCAGCCTTTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQLALPI*QPFLQL
Trigger: GAGCTGGAGGAAAGGCTGTCAAATTGGGAGAGCCAG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGATGACGCCGCAGGGTaGGGGAGAAGTCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSDDAAG*GRSRSR
Trigger: GCGGCTGCGACTTCTCCCTCACCCTGCGGCGTCATC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGCTCTGGAAGACGGATaGAAAGGCACTGCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQALEDG*KGTARE
Trigger: TTCTCGGGCAGTGCCTTTTCATCCGTCTTCCAGAGC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGCTCTGGAAGACGGATaGAAAGGCACTGCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVALEDG*KGTARE
Trigger: TTCTCGGGCAGTGCCTTTTCATCCGTCTTCCAGAGC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCAGGTGTGTGTCCGGATaGGTTGAGCCACAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVRCVSG*VEPQLS
Trigger: GCTAAGCTGTGGCTCAACTCATCCGGACACACACCT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTGTGTAGGCGCTTTCTaGGTCCTGGTCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVCVGAF*VLVCTL
Trigger: CAGAGTGCAGACCAGGACGCAGAAAGCGCCTACACA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGCTTCGCAGTCTGGCTaGCTCCTTGTACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQASQSG*LLVHSA
Trigger: AGCAGAGTGTACAAGGAGGCAGCCAGACTGCGAAGC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTTTCCCCTTGCTCCATaGTGTCGTTGGCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVFPLAP*CRWHGL
Trigger: CAGACCGTGCCAACGACAGCATGGAGCAAGGGGAAA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTTTCCCCTTGCTCCATaGTGTCGTTGGCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQFPLAP*CRWHGL
Trigger: CAGACCGTGCCAACGACAGCATGGAGCAAGGGGAAA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTTCAGGGACGGTTTCTaGGACATAGCCGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVFRDGF*DIAGHL
Trigger: AAGGTGGCCGGCTATGTCCCAGAAACCGTCCCTGAA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCTGGTACACGGACACTaGAATCTCTCGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVLVHGH*NLSAFH
Trigger: GTGGAAGGCCGAGAGATTCCAGTGTCCGTGTACCAG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCAACTTCCAGAATCCTaGAAGGCCCGTGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQQLPES*KARGSW
Trigger: CCAGCTACCACGGGCCTTCCAGGATTCTGGAAGTTG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCGATGCTTCGCAGTCTaGCTGCCTCCTTGTACACTC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVRCFAV*LPPCTL
Trigger: GAGTGTACAAGGAGGCAGCCAGACTGCGAAGCATCG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCGATGCTTCGCAGTCTaGCTGCCTCCTTGTACACTC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQRCFAV*LPPCTL
Trigger: GAGTGTACAAGGAGGCAGCCAGACTGCGAAGCATCG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCAGAAACTCCCTTCCTaGCTGGAGGAGATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVQKLPS*LEEIPL
Trigger: CAAGGGGATCTCCTCCAGCCAGGAAGGGAGTTTCTG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCACTCGCATCTTCCATaGCCTCGATCCACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVHSHLP*PRSTSE
Trigger: CTCAGAGGTGGATCGAGGCCATGGAAGATGCGAGTG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCACTCGCATCTTCCATaGCCTCGATCCACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQHSHLP*PRSTSE
Trigger: CTCAGAGGTGGATCGAGGCCATGGAAGATGCGAGTG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCATCCAAGGCCCTCATaGCAGCTCCATGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQHPRPS*QLHGNP
Trigger: TGGATTTCCATGGAGCTGTCATGAGGGCCTTGGATG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGGAGGCAATTCTCACTaGGCAGACCTAGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVGGNSH*ADLGTC
Trigger: ACAGGTACCTAGGTCTGCTCAGTGAGAATTGCCTCC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCACCTCTGTCAGGGCTaGAGGGACTTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVHLCQG*RDFLLL
Trigger: AAGCAGAAGAAAGTCCCTTCAGCCCTGACAGAGGTG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285046.10
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCTCTGTCAGGGCTaGAGGGACTTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQVLCQG*RDFLLL
Trigger: AAGCAGAAGAAAGTCCCTTCAGCCCTGACAGAGGAC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTCCTCCGAGCTTCTCTaGTCTTCATCCGACGTAAGG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQSSELL*SSSDVR
Trigger: CCTTACGTCGGATGAAGAGCAGAGAAGCTCGGAGGA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTCCTCCGAGCTTCTCTaGTCTTCATCCGACGTAAGG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVSSELL*SSSDVR
Trigger: CCTTACGTCGGATGAAGAGCAGAGAAGCTCGGAGGA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCATGTGGACCAGCTTCTaGAGGTTTTCCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVMWTSF*RFSPCS
Trigger: GGAGCAAGGGGAAAACCTGCAGAAGCTGGTCCACAT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGCGGCTGCCACTTCTTaGTTGGTTTTCTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVAAATS*LVFFSW
Trigger: CCACGAGAAGAAAACCAACCAAGAAGTGGCAGCCGC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGCCGGACCCTCGTGCTaGTGTTCTTCCTGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSAGPSC*CSSCPR
Trigger: CCGCGGACAGGAAGAACACCAGCACGAGGGTCCGGC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACCGTGGCTTGGTCAGTaGCAAGGGCAGGAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSPWLGQ*QGQEGR
Trigger: CCGCCCTTCCTGCCCTTGCCACTGACCAAGCCACGG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTGTCCTTCCACCTTGTaGGTGACACTGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQCPSTL*VTLGSL
Trigger: AAGAGACCCCAGTGTCACCCACAAGGTGGAAGGACA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCACTGCAGGATGTGAGTaGCGTGGTGATCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVTAGCE*RGDQTP
Trigger: AGGGGTTTGATCACCACGCCACTCACATCCTGCAGT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGACTGCAGGATGTGAGTaGCGTGGTGATCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQTAGCE*RGDQTP
Trigger: AGGGGTTTGATCACCACGCCACTCACATCCTGCAGT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGGTCACAAGGTCGACTaGAGGAGAAAATCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQGHKVD*RRKSSP
Trigger: AGGGGAGGATTTTCTCCTCCAGTCGACCTTGTGACC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTTTCTGGAGCAATGGTaGAGCCTAGCAGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQFLEQW*SLAEAY
Trigger: GTATGCCTCTGCTAGGCTTCACCATTGCTCCAGAAA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGCCTCGATCCACCTCTaGGCTGAATTGGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQASIHL*AELVSS
Trigger: AGAAGATACCAATTCAGCTCAGAGGTGGATCGAGGC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAACCCTCCAGGCCACATaGCTCGCCTCCCTCTTCACG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSTLQAT*LASLFT
Trigger: CGTGAAGAGGGAGGCGAGGCATGTGGCCTGGAGGGT...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCACGTCAGCTACCTTCTaGTGGCTCTCCCAATTTGAC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVTSATF*WLSQFD
Trigger: GTCAAATTGGGAGAGCCAGCAGAAGGTAGCTGACGT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGAAGGGACTTTCTTCTaGTTCTTGAAGGTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVEGTFF*FLKVEG
Trigger: CCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGAAGGGACTTTCTTCTaGTTCTTGAAGGTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQEGTFF*FLKVEG
Trigger: CCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCAAAGTGATGTGTGCTTaGACACCAGCAAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVKVMCA*TPASHS
Trigger: GCTGTGGCTTGCTGGTGTGCAAGCACACATCACTTT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACTGCTCCAGTGTCCCTaGCTCATCAGCGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSLLQCP*LISAAL
Trigger: GAGGGCTGCGCTGATGAGCCAGGGACACTGGAGCAG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTCAGCTACCTTCTGCTaGCTCTCCCAATTTGACAGC +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQSATFC*LSQFDS
Trigger: GCTGTCAAATTGGGAGAGCCAGCAGAAGGTAGCTGA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGAAATAGTTTATTACTaGGTGGCGGGTGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQEIVYY*VAGGGR
Trigger: CCTACCCCCACCCGCCACCCAGTAATAAACTATTTC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR CAA 72 bp CATAAATATCCCTTAAGGATTCCATTCATGAAGATGTaGGCAAGGGCAGGGGAGTGGTGGGGCGGTTATAGC +
Preference number: 4 (lower is better)
Translates to: HKYPLRIPFMKM*ARAGEWWGGYS
Trigger: GCTATAACCGCCCCACCACTCCCCTGCCCTTGCCAACATCTTCATGAATGGAATCCTTAAGGGATATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGTCCTCTTTGGGGGCTaGCGACGAGATGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSVLFGG*RRDGTD
Trigger: GTCTGTCCCATCTCGTCGGCAGCCCCCAAAGAGGAC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTTCATCAGAAATAGGTaGCGGGGCCGTCTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVFIRNR*RGRLFF
Trigger: GAAAAACAGACGGCCCCGGCACCTATTTCTGATGAA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACCACTCGTCCCTCTCTaGACAGGAGCTCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSPLVPL*TGARRQ
Trigger: CTGTCTGCGAGCTCCTGTGCAGAGAGGGACGAGTGG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACACGCTATGGTGGAATaGAGCCAGCGCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSHAMVE*SQRLGL
Trigger: AAGGCCCAGGCGCTGGCTGCATTCCACCATAGCGTG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTTGGTTTTCTTCTCGTaGTCAGGTGGTTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQLVFFS*SGGSLR
Trigger: CCTCAGTGAACCACCTGACCACGAGAAGAAAACCAA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCTGCCACTTCTTGGTTaGTTTTCTTCTCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQLPLLG*FSSRGQ
Trigger: CTGACCACGAGAAGAAAACCAACCAAGAAGTGGCAG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCCACTTTGTCCTCACTaGCCATGTAGGTGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVPLCPH*PCRCRE
Trigger: TTCTCTACACCTACATGGCCAGTGAGGACAAAGTGG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285046.10
CDS-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGACACTGGGGTCTCTTaGAGCACTGTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSDTGVS*STVLLL
Trigger: GAGGAGGAGGACAGTGCTTCAAGAGACCCCAGTGTC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGCAGTTCCTGTGCGATaGCAAGGGCTCTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSAVPVR*QGLWTV
Trigger: GACAGTCCAGAGCCCTTGTCATCGCACAGGAACTGC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGATCCACCTCTGAGCTaGATTGGTATCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQDPPLS*IGIFCF
Trigger: AAAGCAGAAGATACCAATTCAGCTCAGAGGTGGATC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGATCCACCTCTGAGCTaGATTGGTATCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVDPPLS*IGIFCF
Trigger: AAAGCAGAAGATACCAATTCAGCTCAGAGGTGGATC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTCACGAAGTCCTCCATaGAGTCATTCTCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQSRSPP*SHSQKG
Trigger: TCCCTTTTGAGAATGACTGCATGGAGGACTTCGTGA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACGGATGAAAAGGCACTaGCCGAGAAGCGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSRMKRH*PRSGVK
Trigger: CTTCACCCCGCTTCTCGGGCAGTGCCTTTTCATCCG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGGGCTGCCGACGAGATaGGACAGACTTTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSGLPTR*DRLCRA
Trigger: AGCCCTACAAAGTCTGTCCCATCTCGTCGGCAGCCC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTCCAGATTTAAGTGCTaGAGCATCTCCACGTATGCT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVSRFKC*SISTYA
Trigger: AGCATACGTGGAGATGCTCCAGCACTTAAATCTGGA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAATCTCCACGCTATGGTaGAATGCAGCCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSISTLW*NAASAW
Trigger: CCAGGCGCTGGCTGCATTCCACCATAGCGTGGAGAT...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACGTATCTCCACGCTATaGTGGAATGCAGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSRISTL*WNAASA
Trigger: GGCGCTGGCTGCATTCCACCATAGCGTGGAGATACG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGGGCTTCCCCTCCAATaGCAAAAGCGTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSGLPLQ*QKRLSH
Trigger: GTGGGAAAGACGCTTTTGTCATTGGAGGGGAAGCCC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACTTCCACCTTGTGGGTaGCACTGGGGTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSLPPCG*HWGLLK
Trigger: CTTCAAGAGACCCCAGTGTCACCCACAAGGTGGAAG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTGTTTAAATAGTCTGTaGGGAGCACTTGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQCLNSL*GALGTG
Trigger: TCCAGTACCAAGTGCTCCTCACAGACTATTTAAACA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTGTTTAAATAGTCTGTaGGGAGCACTTGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVCLNSL*GALGTG
Trigger: TCCAGTACCAAGTGCTCCTCACAGACTATTTAAACA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCACGTTCACATCCACATaGAATTTGTTCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVTFTST*NLFSVF
Trigger: GAAGACGGAGAACAAATTGCATGTGGATGTGAACGT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATGTGTAGGCGCTTTCTaGGTCCTGGTCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSCVGAF*VLVCTL
Trigger: CAGAGTGCAGACCAGGACGCAGAAAGCGCCTACACA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACCAGCTCCTCCAGGATaGCTTGATGAAGGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSPAPPG*LDEGRG
Trigger: TCCACGACCTTCATCAAGGCATCCTGGAGGAGCTGG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGCTTCGCAGTCTGGCTaGCTCCTTGTACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSASQSG*LLVHSA
Trigger: AGCAGAGTGTACAAGGAGGCAGCCAGACTGCGAAGC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGATCCCACCCCTCACATaGCCTTTGCTTTATGTAAAA +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQIPPLT*PLLYVK
Trigger: TTTTACATAAAGCAAAGGGCATGTGAGGGGTGGGAT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCATCCCACCCCTCACATaGCCTTTGCTTTATGTAAAA +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVIPPLT*PLLYVK
Trigger: TTTTACATAAAGCAAAGGGCATGTGAGGGGTGGGAT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATTCAGGGACGGTTTCTaGGACATAGCCGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSFRDGF*DIAGHL
Trigger: AAGGTGGCCGGCTATGTCCCAGAAACCGTCCCTGAA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACTGGTACACGGACACTaGAATCTCTCGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSLVHGH*NLSAFH
Trigger: GTGGAAGGCCGAGAGATTCCAGTGTCCGTGTACCAG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACAACTTCCAGAATCCTaGAAGGCCCGTGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSQLPES*KARGSW
Trigger: CCAGCTACCACGGGCCTTCCAGGATTCTGGAAGTTG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGATGAAGGTCGTGGATaGCTGGGAGTTCACTCAGGC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSDEGRG*LGVHSG
Trigger: GCCTGAGTGAACTCCCAGCCATCCACGACCTTCATC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACATCCAAGGCCCTCATaGCAGCTCCATGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSHPRPS*QLHGNP
Trigger: TGGATTTCCATGGAGCTGTCATGAGGGCCTTGGATG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR TCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGGAGGCAATTCTCACTaGGCAGACCTAGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSGGNSH*ADLGTC
Trigger: ACAGGTACCTAGGTCTGCTCAGTGAGAATTGCCTCC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGAAATCCAGATTTAAGTaGTGGAGCATCTCCACGTAT +
Preference number: 4 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQKSRFK*WSISTY
Trigger: ATACGTGGAGATGCTCCAGCACTTAAATCTGGATTT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATGCAGGTTTTCCCCTTaGTCCATGCTGTCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSCRFSP*SMLSLA
Trigger: TGCCAACGACAGCATGGAGCAAGGGGAAAACCTGCA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAATGTGGACCAGCTTCTaGAGGTTTTCCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSMWTSF*RFSPCS
Trigger: GGAGCAAGGGGAAAACCTGCAGAAGCTGGTCCACAT...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGCGGCTGCCACTTCTTaGTTGGTTTTCTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSAAATS*LVFFSW
Trigger: CCACGAGAAGAAAACCAACCAAGAAGTGGCAGCCGC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATGTCCTTCCACCTTGTaGGTGACACTGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSCPSTL*VTLGSL
Trigger: AAGAGACCCCAGTGTCACCCACAAGGTGGAAGGACA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGTGTCTCTGCCTTCATaGTCCATGTCATCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSVSLPS*SMSSKA
Trigger: GGCCTTGGATGACATGGACCATGAAGGCAGAGACAC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTTGTTAGAAAACTGGTaGCACATTAGTCCACAGGAT +
Preference number: 4 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVLLENW*HISPQD
Trigger: ATCCTGTGGACTAATGTGCCACCAGTTTTCTAACAA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
3UTR CAA 72 bp CAGCCAGGTCTGCACAAATCCATTTTATGTACACCCTaGTTAGAAAACTGGTGGCACATTAGTCCACAGGAT +
Preference number: 4 (lower is better)
Translates to: QPGLHKSILCTP*LENWWHISPQD
Trigger: ATCCTGTGGACTAATGTGCCACCAGTTTTCTAACAAGGGTGTACATAAAATGGATTTGTGCAGACCTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGGGCCAATGTGTCTCTaGCTTCATGGTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSGPMCL*LHGPCH
Trigger: ATGACATGGACCATGAAGGCAGAGACACATTGGCCC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAACGTCAGCTACCTTCTaGTGGCTCTCCCAATTTGAC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSTSATF*WLSQFD
Trigger: GTCAAATTGGGAGAGCCAGCAGAAGGTAGCTGACGT...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATCAGCTACCTTCTGCTaGCTCTCCCAATTTGACAGC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSSATFC*LSQFDS
Trigger: GCTGTCAAATTGGGAGAGCCAGCAGAAGGTAGCTGA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATTGGTTTTCTTCTCGTaGTCAGGTGGTTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSLVFFS*SGGSLR
Trigger: CCTCAGTGAACCACCTGACCACGAGAAGAAAACCAA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATCACGAAGTCCTCCATaGAGTCATTCTCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSSRSPP*SHSQKG
Trigger: TCCCTTTTGAGAATGACTGCATGGAGGACTTCGTGA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACCCTTGTTAGAAAACTaGTGGCACATTAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSPLLEN*WHISPQ
Trigger: CTGTGGACTAATGTGCCACCAGTTTTCTAACAAGGG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAACGTTCACATCCACATaGAATTTGTTCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSTFTST*NLFSVF
Trigger: GAAGACGGAGAACAAATTGCATGTGGATGTGAACGT...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACTCATGACAGCTCCATaGAAATCCAGATTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSLMTAP*KSRFKC
Trigger: GCACTTAAATCTGGATTTCCATGGAGCTGTCATGAG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAAAATCCAGATTTAAGTaGTGGAGCATCTCCACGTAT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSKSRFK*WSISTY
Trigger: ATACGTGGAGATGCTCCAGCACTTAAATCTGGATTT...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACACATGCTTGATAACTaGTATAACACACTCGCATCT +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSHMLDN*YNTLAS
Trigger: AGATGCGAGTGTGTTATAGCAGTTATCAAGCATGTG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR GCA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATGTTACAAGTCCACATaGTTGATAACTGCTATAACA +
Preference number: 4 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSCYKST*LITAIT
Trigger: TGTTATAGCAGTTATCAAGCATGTGGACTTGTAACA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS GCA 90 bp GGAATGCAGCCAGCGCCTGGGCCTTGTAGTCCTCAGGGAGGGCTCTaGTCAGACAGCCATACCACTCGTCCCTCTCTGCACAGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GMQPAPGPCSPQGGL*SDSHTTRPSLHRSS
Trigger: CGAGCTCCTGTGCAGAGAGGGACGAGTGGTATGGCTGTCTGAGCAGAGCCCTCCCTGAGGACTACAAGGCCCAGGCGCTGGCTGCATTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS CCA 90 bp TTCCTCCAGCTCCTCCAGGATGCCTTGATGAAGGTCGTGGATGGCTaGGAGTTCACTCAGGCCCTGCCTCAGCTCCTCCCGGGCCAATGT +
Preference number: 5 (lower is better)
Translates to: FLQLLQDALMKVVDG*EFTQALPQLLPGQC
Trigger: ACATTGGCCCGGGAGGAGCTGAGGCAGGGCCTGAGTGAACTCCCAGCCATCCACGACCTTCATCAAGGCATCCTGGAGGAGCTGGAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS TCA 90 bp CACGGACAGCAGCTGCCAGCCGGGGAGAGTGGAGGCAATTCTCACTaGGCAGACCTAGGTACCTGTCGAACTGCAGGATGTGAGTGGCGT +
Preference number: 5 (lower is better)
Translates to: HGQQLPAGESGGNSH*ADLGTCRTAGCEWR
Trigger: ACGCCACTCACATCCTGCAGTTCGACAGGTACCTAGGTCTGCTCAGTGAGAATTGCCTCCACTCTCCCCGGCTGGCAGCTGCTGTCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS GCA 90 bp ACACTGGGGTCTCTTGAAGCACTGTCCTCCTCCTCCGAGCTTCTCTaGTCTTCATCCGACGTAAGGTCCTCTTTGGGGGCTGCCGACGAG +
Preference number: 5 (lower is better)
Translates to: TLGSLEALSSSSELL*SSSDVRSSLGAADE
Trigger: CTCGTCGGCAGCCCCCAAAGAGGACCTTACGTCGGATGAAGAGCAGAGAAGCTCGGAGGAGGAGGACAGTGCTTCAAGAGACCCCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000543601.5
CDS CCA 90 bp AGGCCCTGCCTCAGCTCCTCCCGGGCCAATGTGTCTCTGCCTTCATaGTCCATGTCATCCAAGGCCCTCATGACAGCTCCATGGAAATCC +
Preference number: 5 (lower is better)
Translates to: RPCLSSSRANVSLPS*SMSSKALMTAPWKS
Trigger: GGATTTCCATGGAGCTGTCATGAGGGCCTTGGATGACATGGACCATGAAGGCAGAGACACATTGGCCCGGGAGGAGCTGAGGCAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000543601.5
CDS GCA 90 bp CGAGCTTCTCTGCTCTTCATCCGACGTAAGGTCCTCTTTGGGGGCTaGCGACGAGATGGGACAGACTTTGTAGGGCTCTGTGTAGGCGCT +
Preference number: 5 (lower is better)
Translates to: RASLLFIRRKVLFGG*RRDGTDFVGLCVGA
Trigger: AGCGCCTACACAGAGCCCTACAAAGTCTGTCCCATCTCGTCGGCAGCCCCCAAAGAGGACCTTACGTCGGATGAAGAGCAGAGAAGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000543601.5
CDS GCA 90 bp GCTGGCTCTCCCAATTTGACAGCCTTTCCTCCAGCTCCTCCAGGATaGCTTGATGAAGGTCGTGGATGGCTGGGAGTTCACTCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: AGSPNLTAFPPAPPG*LDEGRGWLGVHSGP
Trigger: AGGGCCTGAGTGAACTCCCAGCCATCCACGACCTTCATCAAGGCATCCTGGAGGAGCTGGAGGAAAGGCTGTCAAATTGGGAGAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS CCA 90 bp AGGCCCTGCCTCAGCTCCTCCCGGGCCAATGTGTCTCTGCCTTCATaGTCCATGTCATCCAAGGCCCTCATGACAGCTCCATGGAAATCT +
Preference number: 5 (lower is better)
Translates to: RPCLSSSRANVSLPS*SMSSKALMTAPWKS
Trigger: AGATTTCCATGGAGCTGTCATGAGGGCCTTGGATGACATGGACCATGAAGGCAGAGACACATTGGCCCGGGAGGAGCTGAGGCAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476851.1
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCTGGAGGAGATCCCCTaGGCCCCGGACGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVLEEIP*APDAVL
Trigger: GAGCACAGCGTCCGGGGCCAAGGGGATCTCCTCCAG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCTGGAGGAGATCCCCTaGGCCCCGGACGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQLEEIP*APDAVL
Trigger: GAGCACAGCGTCCGGGGCCAAGGGGATCTCCTCCAG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS CCA 90 bp TCCAATCTGAGATGCGTGAAGAGTGCCTCTGTGTGGGGTGTGCTTTaGCACCTTCGGGCTCACCACACACAAACTGTTGACCCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: SNLRCVKSASVWGVL*HLRAHHTQTVDPRF
Trigger: GAAGCGAGGGTCAACAGTTTGTGTGTGGTGAGCCCGAAGGTGCCAAAGCACACCCCACACAGAGGCACTCTTCACGCATCTCAGATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGTACTGGAAGAGGCGTaGAACCACCCGCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVVLEEA*NHPQQP
Trigger: CGGCTGCTGCGGGTGGTTCAACGCCTCTTCCAGTAC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS GCA 90 bp TCTCCAGAGGCAGCCACCTCTGTCAGGGCTGAAGGGACTTTCTTCTaGTTCTTGAAGGTCGAGGGGTTAATGCTCTGGAAGACGGATGAA +
Preference number: 5 (lower is better)
Translates to: SPEAATSVRAEGTFF*FLKVEGLMLWKTDE
Trigger: TTCATCCGTCTTCCAGAGCATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTCAGCCCTGACAGAGGTGGCTGCCTCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGACGTAAGGTCCTCTTaGGGGGCTGCCGACGAGATG +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQDVRSS*GAADEM
Trigger: CATCTCGTCGGCAGCCCCCAAAGAGGACCTTACGTC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTTCTTCCAGTGCCGCTaGCCCCTCTTACACCGGCTG +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVFFQCR*PLLHRL
Trigger: CAGCCGGTGTAAGAGGGGCAAGCGGCACTGGAAGAA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285046.10
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCTCCTCCAGGATGCCTaGATGAAGGTCGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQLLQDA*MKVVDG
Trigger: GCCATCCACGACCTTCATCAAGGCATCCTGGAGGAG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCTCCTCCAGGATGCCTaGATGAAGGTCGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVLLQDA*MKVVDG
Trigger: GCCATCCACGACCTTCATCAAGGCATCCTGGAGGAG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS GCA 90 bp TGCATAGTCATTTACTGTTATCTCCAATCTGAGATGCGTGAAGAGTaGCTCTGTGTGGGGTGTGCTTTGGCACCTTCGGGCTCACCACAC +
Preference number: 5 (lower is better)
Translates to: CIVIYCYLQSEMREE*LCVGCALAPSGSPH
Trigger: GTGTGGTGAGCCCGAAGGTGCCAAAGCACACCCCACACAGAGGCACTCTTCACGCATCTCAGATTGGAGATAACAGTAAATGACTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS GCA 90 bp TCCAAGGCCACTTTGTCCTCTGTCAGGGCTGAAGGGACTTTCTTCTaGTTCTTGAAGGTCGAGGGGTTAATGCTCTGGAAGACGGATGAA +
Preference number: 5 (lower is better)
Translates to: SKATLSSVRAEGTFF*FLKVEGLMLWKTDE
Trigger: TTCATCCGTCTTCCAGAGCATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTCAGCCCTGACAGAGGACAAAGTGGCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGGCGGCTGCCACTTCTaGGTTGGTTTTCTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQGGCHF*VGFLLV
Trigger: CACGAGAAGAAAACCAACCAAGAAGTGGCAGCCGCC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGTCTGTGAGGAGCACTaGGTACTGGAAGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVVCEEH*VLEEAL
Trigger: CAACGCCTCTTCCAGTACCAAGTGCTCCTCACAGAC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTGTGAGGAGCACTaGGTACTGGAAGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQVCEEH*VLEEAL
Trigger: CAACGCCTCTTCCAGTACCAAGTGCTCCTCACAGAC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGCGGCTGACCTTCATGTaGGCCACAGCCAATGTGTTC +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQRLTFM*ATANVF
Trigger: GAACACATTGGCTGTGGCCAACATGAAGGTCAGCCG...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTACTTCAGCGGGTACTaGTTCCGCGAACAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQYFSGY*FREQFR
Trigger: CCGGAACTGTTCGCGGAACAAGTACCCGCTGAAGTA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGAGCACTGACATAGTGTaGAGGACTGCTCTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQSTDIV*RTALGE
Trigger: CTCCCCCAGAGCAGTCCTCAACACTATGTCAGTGCT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCCTCTCCAAGGCCACTTaGTCCTCTGTCAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVLSKAT*SSVRAE
Trigger: TTCAGCCCTGACAGAGGACAAAGTGGCCTTGGAGAG...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543601.5
CDS CCA 90 bp TTTACTGTTATCTCCAATCTGAGATGCGTGAAGAGTGCCTCTGTGTaGGGTGTGCTTTGGCACCTTCGGGCTCACCACACACAAACTGTT +
Preference number: 5 (lower is better)
Translates to: FTVISNLRCVKSASV*GVLWHLRAHHTQTV
Trigger: AACAGTTTGTGTGTGGTGAGCCCGAAGGTGCCAAAGCACACCCCACACAGAGGCACTCTTCACGCATCTCAGATTGGAGATAACAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCGTGTGTCCGGATGAGTaGAGCCACAGCTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVVCPDE*SHSLAS
Trigger: AGAAGCTAAGCTGTGGCTCAACTCATCCGGACACAC...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGCTGCCACTTCTTGGTaGGTTTTCTTCTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQAATSW*VFFSWS
Trigger: TGACCACGAGAAGAAAACCAACCAAGAAGTGGCAGC...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCTCTGCACTCTGCTGTTaGCTCTCAAAGGCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVSALCC*LSKALK
Trigger: CTTCAACGCCTTTGAGAGCAAACAGCAGAGTGCAGA...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCAGTCTGGCTGCCTCCTaGTACACTCTGCTCAAATTC +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVSLAAS*YTLLKF
Trigger: GAATTTGAGCAGAGTGTACAAGGAGGCAGCCAGACT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS GCA 90 bp CTGGACTCTGAAGAGGACCTAGAGGAAGACACGTTCACATCCACATaGAATTTGTTCTCCGTCTTCTTCTTAAACGTCAGTGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LDSEEDLEEDTFTST*NLFSVFFLNVSARK
Trigger: CTTCCTGGCACTGACGTTTAAGAAGAAGACGGAGAACAAATTGCATGTGGATGTGAACGTGTCTTCCTCTAGGTCCTCTTCAGAGTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000543601.5
ENST00000640506.1
CDS GCA 90 bp ATGGTGAAGCCTAGCAGAGGCATACTCTCCAAGGCCACTTTGTCCTaGAGAGGACAGAAGGAAAAATTGACATTAAACACCACACTCTGC +
Preference number: 5 (lower is better)
Translates to: MVKPSRGILSKATLS*RGQKEKLTLNTTLC
Trigger: GCAGAGTGTGGTGTTTAATGTCAATTTTTCCTTCTGTCCTCTGCAGGACAAAGTGGCCTTGGAGAGTATGCCTCTGCTAGGCTTCACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAAGTGCACCCTGTGTGTaGTCGTACTCGGCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSSAPCV*SYSAES
Trigger: GGACTCCGCCGAGTACGACAACACACAGGGTGCACT...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGACTGTCCTTCCACCTaGTGGGTGACACTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSDCPST*WVTLGS
Trigger: AGACCCCAGTGTCACCCACAAGGTGGAAGGACAGTC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACTGCAGGTTTTCCCCTaGCTCCATGCTGTCGTTGGC +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSLQVFP*LHAVVG
Trigger: GCCAACGACAGCATGGAGCAAGGGGAAAACCTGCAG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCACTTTCTTCTGCTTCTaGAAGGTCGAGGGGTTAATG +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVTFFCF*KVEGLM
Trigger: CATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGACTTTCTTCTGCTTCTaGAAGGTCGAGGGGTTAATG +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQTFFCF*KVEGLM
Trigger: CATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGGCGGCTGCCACTTCTaGGTTGGTTTTCTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSGGCHF*VGFLLV
Trigger: CACGAGAAGAAAACCAACCAAGAAGTGGCAGCCGCC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCAGCTGGCTCTCCCAATTaGACAGCCTTTCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSAGSPN*TAFPPA
Trigger: AGCTGGAGGAAAGGCTGTCAAATTGGGAGAGCCAGC...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATGCTCCATGCTGTCGTaGGCACGGTCTGTGACTTTG +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSCSMLS*ARSVTL
Trigger: CAAAGTCACAGACCGTGCCAACGACAGCATGGAGCA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATACTTCAGCGGGTACTaGTTCCGCGAACAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSYFSGY*FREQFR
Trigger: CCGGAACTGTTCGCGGAACAAGTACCCGCTGAAGTA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCACCATTCATGAAGATGTaGGCAAGGGCAGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSPFMKM*ARAGEW
Trigger: CCACTCCCCTGCCCTTGCCAACATCTTCATGAATGG...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS TCA 90 bp CCAAGATCACACAGCAGTAAAGAGCAGATCCAGAATTTGCACTCATaGCCACCTTCTAACCCCACATTCTTTCCATGGATTTCATCAGTC +
Preference number: 5 (lower is better)
Translates to: PRSHSSKEQIQNLHS*PPSNPTFFPWISSV
Trigger: GACTGATGAAATCCATGGAAAGAATGTGGGGTTAGAAGGTGGTCATGAGTGCAAATTCTGGATCTGCTCTTTACTGCTGTGTGATCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS-3UTR CAA 90 bp TGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGGTCACATCCACATGCAATTaGTTCTCCGTCTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: CSGGGGTPPLISYVSIQVTSTCN*FSVFFL
Trigger: TAAGAAGAAGACGGAGAACAAATTGCATGTGGATGT...GACCTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGACATCCACATGCAATTaGTTCTCCGTCTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQTSTCN*FSVFFL
Trigger: TAAGAAGAAGACGGAGAACAAATTGCATGTGGATGT...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp GACTGCTCTGGGGGAGGAGGGACCCCTCCTTTAATAAGTTATGTTAGTATACAGTACAAGTCCACATGCTaGATAACTGCTATAACACAC +
Preference number: 5 (lower is better)
Translates to: DCSGGGGTPPLISYVSIQYKSTC*ITAITH
Trigger: GTGTGTTATAGCAGTTATCAAGCATGTGGACTTGTA...CTGTATACTAACATAACTTATTAAAGGAGGGGTCCCTCCTCCCCCAGAGCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATCTGCACTCTGCTGTTaGCTCTCAAAGGCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSSALCC*LSKALK
Trigger: CTTCAACGCCTTTGAGAGCAAACAGCAGAGTGCAGA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS GCA 90 bp TCCTGCAGAGGACAGAAGGAAAAATTGACATTAAACACCACACTCTaGATAGTCATTTACTGTTATCTCCAATCTGAGATGCGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: SCRGQKEKLTLNTTL*IVIYCYLQSEMREE
Trigger: CTCTTCACGCATCTCAGATTGGAGATAACAGTAAATGACTATGCAGAGTGTGGTGTTTAATGTCAATTTTTCCTTCTGTCCTCTGCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS-3UTR CAA 90 bp ACTGGTGGCACATTAGTCCACAGGATTCCATCTGTTATTGACTTAAGTAAATCATACAAGTCCACATGCTaGATAACTGCTATAACACAC +
Preference number: 5 (lower is better)
Translates to: TGGTLVHRIPSVIDLSKSYKSTC*ITAITH
Trigger: GTGTGTTATAGCAGTTATCAAGCATGTGGACTTGTA...TGATTTACTTAAGTCAATAACAGATGGAATCCTGTGGACTAATGTGCCACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS TCA 90 bp TTCCATGGATTTCATCAGTCAGTGACTCAGTTTTGCAGTTACTTCTaGTCACATATTCTATACTCATTCTTCCAAAACCTCATTTACAGT +
Preference number: 5 (lower is better)
Translates to: FHGFHQSVTQFCSYF*SHILYSFFQNLIYS
Trigger: ACTGTAAATGAGGTTTTGGAAGAATGAGTATAGAATATGTGATCAGAAGTAACTGCAAAACTGAGTCACTGACTGATGAAATCCATGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS GCA 72 bp CCAGCGCCTGGGCCTTGTAGTCCTCAGGGAGGGCTCTaGTCAGACAGCCATACCACTCGTCCCTCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: PAPGPCSPQGGL*SDSHTTRPSLH
Trigger: GTGCAGAGAGGGACGAGTGGTATGGCTGTCTGAGCAGAGCCCTCCCTGAGGACTACAAGGCCCAGGCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS GCA 72 bp CCCCAGCCTCTCTCGTATCTCCACGCTATGGTGGAATaGAGCCAGCGCCTGGGCCTTGTAGTCCTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: PQPLSYLHAMVE*SQRLGLVVLRE
Trigger: CTCCCTGAGGACTACAAGGCCCAGGCGCTGGCTGCATTCCACCATAGCGTGGAGATACGAGAGAGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS CCA 72 bp CTCCTCCAGGATGCCTTGATGAAGGTCGTGGATGGCTaGGAGTTCACTCAGGCCCTGCCTCAGCTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: LLQDALMKVVDG*EFTQALPQLLP
Trigger: CGGGAGGAGCTGAGGCAGGGCCTGAGTGAACTCCCAGCCATCCACGACCTTCATCAAGGCATCCTGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS CCA 72 bp CCAGCTCCTCCAGGATGCCTTGATGAAGGTCGTGGATaGCTGGGAGTTCACTCAGGCCCTGCCTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: PAPPGCLDEGRG*LGVHSGPASAP
Trigger: AGGAGCTGAGGCAGGGCCTGAGTGAACTCCCAGCCATCCACGACCTTCATCAAGGCATCCTGGAGGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS TCA 72 bp TCTTGCCACAGGCGTGACAGTGATGACGCCGCAGGGTaGGGGAGAAGTCGCAGCCGCAGTTCATGCACATCA +
Preference number: 6 (lower is better)
Translates to: SCHRRDSDDAAG*GRSRSRSSCTS
Trigger: TGATGTGCATGAACTGCGGCTGCGACTTCTCCCTCACCCTGCGGCGTCATCACTGTCACGCCTGTGGCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS CAA 72 bp CCGCAGCAGCCGATGCTTCGCAGTCTGGCTGCCTCCTaGTACACTCTGCTCAAATTCACGGACAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: PQQPMLRSLAAS*YTLLKFTDSSC
Trigger: GCAGCTGCTGTCCGTGAATTTGAGCAGAGTGTACAAGGAGGCAGCCAGACTGCGAAGCATCGGCTGCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS TCA 72 bp CAGCTGCCAGCCGGGGAGAGTGGAGGCAATTCTCACTaGGCAGACCTAGGTACCTGTCGAACTGCAGGATGT +
Preference number: 6 (lower is better)
Translates to: QLPAGESGGNSH*ADLGTCRTAGC
Trigger: ACATCCTGCAGTTCGACAGGTACCTAGGTCTGCTCAGTGAGAATTGCCTCCACTCTCCCCGGCTGGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS GCA 72 bp GAACCACCCGCAGCAGCCGATGCTTCGCAGTCTGGCTaGCTCCTTGTACACTCTGCTCAAATTCACGGACAG +
Preference number: 6 (lower is better)
Translates to: EPPAAADASQSG*LLVHSAQIHGQ
Trigger: CTGTCCGTGAATTTGAGCAGAGTGTACAAGGAGGCAGCCAGACTGCGAAGCATCGGCTGCTGCGGGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS CCA 72 bp CTCAGCTCCTCCCGGGCCAATGTGTCTCTGCCTTCATaGTCCATGTCATCCAAGGCCCTCATGACAGCTCCA +
Preference number: 6 (lower is better)
Translates to: LSSSRANVSLPS*SMSSKALMTAP
Trigger: TGGAGCTGTCATGAGGGCCTTGGATGACATGGACCATGAAGGCAGAGACACATTGGCCCGGGAGGAGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS GCA 72 bp CTGCTCTTCATCCGACGTAAGGTCCTCTTTGGGGGCTaGCGACGAGATGGGACAGACTTTGTAGGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: LLFIRRKVLFGG*RRDGTDFVGLC
Trigger: ACAGAGCCCTACAAAGTCTGTCCCATCTCGTCGGCAGCCCCCAAAGAGGACCTTACGTCGGATGAAGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000543601.5
CDS CAA 72 bp ATAGTCTGTGAGGAGCACTTGGTACTGGAAGAGGCGTaGAACCACCCGCAGCAGCCGATGCTTCGCAGTCTG +
Preference number: 6 (lower is better)
Translates to: IVCEEHLVLEEA*NHPQQPMLRSL
Trigger: CAGACTGCGAAGCATCGGCTGCTGCGGGTGGTTCAACGCCTCTTCCAGTACCAAGTGCTCCTCACAGACTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS GCA 72 bp TCTCTTGAAGCACTGTCCTCCTCCTCCGAGCTTCTCTaGTCTTCATCCGACGTAAGGTCCTCTTTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: SLEALSSSSELL*SSSDVRSSLGA
Trigger: AGCCCCCAAAGAGGACCTTACGTCGGATGAAGAGCAGAGAAGCTCGGAGGAGGAGGACAGTGCTTCAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000543601.5
CDS GCA 72 bp TCCTTGTACACTCTGCTCAAATTCACGGACAGCAGCTaGCAGCCGGGGAGAGTGGAGGCAATTCTCACTGAG +
Preference number: 6 (lower is better)
Translates to: SLYTLLKFTDSS*QPGRVEAILTE
Trigger: CTCAGTGAGAATTGCCTCCACTCTCCCCGGCTGGCAGCTGCTGTCCGTGAATTTGAGCAGAGTGTACAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000457774.1
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS CCA 72 bp AGATGCGTGAAGAGTGCCTCTGTGTGGGGTGTGCTTTaGCACCTTCGGGCTCACCACACACAAACTGTTGAC +
Preference number: 6 (lower is better)
Translates to: RCVKSASVWGVL*HLRAHHTQTVD
Trigger: GTCAACAGTTTGTGTGTGGTGAGCCCGAAGGTGCCAAAGCACACCCCACACAGAGGCACTCTTCACGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS CCA 72 bp ATCTCCAATCTGAGATGCGTGAAGAGTGCCTCTGTGTaGGGTGTGCTTTGGCACCTTCGGGCTCACCACACA +
Preference number: 6 (lower is better)
Translates to: ISNLRCVKSASV*GVLWHLRAHHT
Trigger: TGTGTGGTGAGCCCGAAGGTGCCAAAGCACACCCCACACAGAGGCACTCTTCACGCATCTCAGATTGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS CAA 72 bp TTGGCCATCCTGTCCTTCAGGTACTTCAGCGGGTACTaGTTCCGCGAACAGTTCCGGCACACGATCTTGCCA +
Preference number: 6 (lower is better)
Translates to: LAILSFRYFSGY*FREQFRHTILP
Trigger: TGGCAAGATCGTGTGCCGGAACTGTTCGCGGAACAAGTACCCGCTGAAGTACCTGAAGGACAGGATGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000543601.5
CDS TCA 72 bp CTCTGCCTTCATGGTCCATGTCATCCAAGGCCCTCATaGCAGCTCCATGGAAATCTCTCCTCTCGTTGTGGC +
Preference number: 6 (lower is better)
Translates to: LCLHGPCHPRPS*QLHGNLSSRCG
Trigger: GCCACAACGAGAGGAGAGATTTCCATGGAGCTGTCATGAGGGCCTTGGATGACATGGACCATGAAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476851.1
CDS CAA 90 bp GAGGCAGCCACCTCTGTCAGGGCTGAAGGGACTTTCTTCTGCTTCTaGAAGGTCGAGGGGTTAATGCTCTGGAAGACGGATGAAAAGGCA +
Preference number: 6 (lower is better)
Translates to: EAATSVRAEGTFFCF*KVEGLMLWKTDEKA
Trigger: TGCCTTTTCATCCGTCTTCCAGAGCATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTCAGCCCTGACAGAGGTGGCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
CDS TCA 72 bp CGTATGCTTTCTCTGAAGATAGCAGTTCCTGTGCGATaGCAAGGGCTCTGGACTGTCCTTCCACCTTGTGGG +
Preference number: 6 (lower is better)
Translates to: RMLSLKIAVPVR*QGLWTVLPPCG
Trigger: CCCACAAGGTGGAAGGACAGTCCAGAGCCCTTGTCATCGCACAGGAACTGCTATCTTCAGAGAAAGCATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS TCA 72 bp CTTCACTGCTGCCCTCTTCCTTTTCTGGAGCAATGGTaGAGCCTAGCAGAGGCATACTCTCCAAGGCCACTT +
Preference number: 6 (lower is better)
Translates to: LHCCPLPFLEQW*SLAEAYSPRPL
Trigger: AAGTGGCCTTGGAGAGTATGCCTCTGCTAGGCTTCACCATTGCTCCAGAAAAGGAAGAGGGCAGCAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000487605.1
ENST00000543601.5
CDS TCA 72 bp CTCTGCCTTCATGGTCCATGTCATCCAAGGCCCTCATaGCAGCTCCATGGAAATCCAGGGGCTTCAATGTCT +
Preference number: 6 (lower is better)
Translates to: LCLHGPCHPRPS*QLHGNPGASMS
Trigger: AGACATTGAAGCCCCTGGATTTCCATGGAGCTGTCATGAGGGCCTTGGATGACATGGACCATGAAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468662.5
CDS CAA 90 bp GCCACTTTGTCCTCTGTCAGGGCTGAAGGGACTTTCTTCTGCTTCTaGAAGGTCGAGGGGTTAATGCTCTGGAAGACGGATGAAAAGGCA +
Preference number: 6 (lower is better)
Translates to: ATLSSVRAEGTFFCF*KVEGLMLWKTDEKA
Trigger: TGCCTTTTCATCCGTCTTCCAGAGCATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTCAGCCCTGACAGAGGACAAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543601.5
CDS GCA 72 bp ATTTACTGTTATCTCCAATCTGAGATGCGTGAAGAGTaGCTCTGTGTGGGGTGTGCTTTGGCACCTTCGGGC +
Preference number: 6 (lower is better)
Translates to: IYCYLQSEMREE*LCVGCALAPSG
Trigger: GCCCGAAGGTGCCAAAGCACACCCCACACAGAGGCACTCTTCACGCATCTCAGATTGGAGATAACAGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS CAA 72 bp ACCTCTGTCAGGGCTGAAGGGACTTTCTTCTGCTTCTaGAAGGTCGAGGGGTTAATGCTCTGGAAGACGGAT +
Preference number: 6 (lower is better)
Translates to: TSVRAEGTFFCF*KVEGLMLWKTD
Trigger: ATCCGTCTTCCAGAGCATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTCAGCCCTGACAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
CDS CAA 72 bp TCCTCTGTCAGGGCTGAAGGGACTTTCTTCTGCTTCTaGAAGGTCGAGGGGTTAATGCTCTGGAAGACGGAT +
Preference number: 6 (lower is better)
Translates to: SSVRAEGTFFCF*KVEGLMLWKTD
Trigger: ATCCGTCTTCCAGAGCATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTCAGCCCTGACAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543601.5
CDS TCA 72 bp CTCTGCCTTCATGGTCCATGTCATCCAAGGCCCTCATaGCAGCTCCATGGAAATCCAGATTTAAGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: LCLHGPCHPRPS*QLHGNPDLSAG
Trigger: TCCAGCACTTAAATCTGGATTTCCATGGAGCTGTCATGAGGGCCTTGGATGACATGGACCATGAAGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285046.10
ENST00000543601.5
CDS CAA 90 bp GGAGCAATGGTGAAGCCTAGCAGAGGCATACTCTCCAAGGCCACTTaGTCCTGCAGAGGACAGAAGGAAAAATTGACATTAAACACCACA +
Preference number: 6 (lower is better)
Translates to: GAMVKPSRGILSKAT*SCRGQKEKLTLNTT
Trigger: TGTGGTGTTTAATGTCAATTTTTCCTTCTGTCCTCTGCAGGACAAAGTGGCCTTGGAGAGTATGCCTCTGCTAGGCTTCACCATTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS GCA 72 bp CCTAGCAGAGGCATACTCTCCAAGGCCACTTTGTCCTaGAGAGGACAGAAGGAAAAATTGACATTAAACACC +
Preference number: 6 (lower is better)
Translates to: PSRGILSKATLS*RGQKEKLTLNT
Trigger: GGTGTTTAATGTCAATTTTTCCTTCTGTCCTCTGCAGGACAAAGTGGCCTTGGAGAGTATGCCTCTGCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS CAA 72 bp GACCTAGAGGAAGACACGTTCACATCCACATGCAATTaGTTCTCCGTCTTCTTCTTAAACGTCAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: DLEEDTFTSTCN*FSVFFLNVSAR
Trigger: CCTGGCACTGACGTTTAAGAAGAAGACGGAGAACAAATTGCATGTGGATGTGAACGTGTCTTCCTCTAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000543601.5
ENST00000640506.1
CDS CAA 72 bp GTGAAGCCTAGCAGAGGCATACTCTCCAAGGCCACTTaGTCCTGCAGAGGACAGAAGGAAAAATTGACATTA +
Preference number: 6 (lower is better)
Translates to: VKPSRGILSKAT*SCRGQKEKLTL
Trigger: TAATGTCAATTTTTCCTTCTGTCCTCTGCAGGACAAAGTGGCCTTGGAGAGTATGCCTCTGCTAGGCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS CCA 72 bp TGCTTGATAACTGCTATAACACACTCGCATCTTCCATaGCCTCGATCCACCTCTGAGCTGAATTGGTATCTT +
Preference number: 6 (lower is better)
Translates to: CLITAITHSHLP*PRSTSELNWYL
Trigger: AAGATACCAATTCAGCTCAGAGGTGGATCGAGGCCATGGAAGATGCGAGTGTGTTATAGCAGTTATCAAGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000487605.1
ENST00000543601.5
CDS TCA 72 bp CACAGCAGTAAAGAGCAGATCCAGAATTTGCACTCATaGCCACCTTCTAACCCCACATTCTTTCCATGGATT +
Preference number: 6 (lower is better)
Translates to: HSSKEQIQNLHS*PPSNPTFFPWI
Trigger: AATCCATGGAAAGAATGTGGGGTTAGAAGGTGGTCATGAGTGCAAATTCTGGATCTGCTCTTTACTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS GCA 72 bp GAAGAGGACCTAGAGGAAGACACGTTCACATCCACATaGAATTTGTTCTCCGTCTTCTTCTTAAACGTCAGT +
Preference number: 6 (lower is better)
Translates to: EEDLEEDTFTST*NLFSVFFLNVS
Trigger: ACTGACGTTTAAGAAGAAGACGGAGAACAAATTGCATGTGGATGTGAACGTGTCTTCCTCTAGGTCCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285046.10
ENST00000543601.5
ENST00000640506.1
CDS GCA 72 bp CAAGATCACACAGCAGTAAAGAGCAGATCCAGAATTTaGACTCATGACCACCTTCTAACCCCACATTCTTTC +
Preference number: 6 (lower is better)
Translates to: QDHTAVKSRSRI*THDHLLTPHSF
Trigger: GAAAGAATGTGGGGTTAGAAGGTGGTCATGAGTGCAAATTCTGGATCTGCTCTTTACTGCTGTGTGATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS GCA 72 bp CCTAAGAATTTGTTACAAGTCCACATGCTTGATAACTaGTATAACACACTCGCATCTTCCATGGCCTCGATC +
Preference number: 6 (lower is better)
Translates to: PKNLLQVHMLDN*YNTLASSMASI
Trigger: GATCGAGGCCATGGAAGATGCGAGTGTGTTATAGCAGTTATCAAGCATGTGGACTTGTAACAAATTCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000487605.1
ENST00000543601.5
CDS CAA 90 bp AAGCATTCACATATTGACCTAAGAATTTGTTACAAGTCCACATGCTaGATAACTGCTATAACACACTCGCATCTTCCATGGCCTCGATCC +
Preference number: 6 (lower is better)
Translates to: KHSHIDLRICYKSTC*ITAITHSHLPWPRS
Trigger: GGATCGAGGCCATGGAAGATGCGAGTGTGTTATAGCAGTTATCAAGCATGTGGACTTGTAACAAATTCTTAGGTCAATATGTGAATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000487605.1
ENST00000543601.5
CDS CAA 72 bp CATATTGACCTAAGAATTTGTTACAAGTCCACATGCTaGATAACTGCTATAACACACTCGCATCTTCCATGG +
Preference number: 6 (lower is better)
Translates to: HIDLRICYKSTC*ITAITHSHLPW
Trigger: CCATGGAAGATGCGAGTGTGTTATAGCAGTTATCAAGCATGTGGACTTGTAACAAATTCTTAGGTCAATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000487605.1
ENST00000543601.5
CDS GCA 72 bp TCACATATTGACCTAAGAATTTGTTACAAGTCCACATaGTTGATAACTGCTATAACACACTCGCATCTTCCA +
Preference number: 6 (lower is better)
Translates to: SHIDLRICYKST*LITAITHSHLP
Trigger: TGGAAGATGCGAGTGTGTTATAGCAGTTATCAAGCATGTGGACTTGTAACAAATTCTTAGGTCAATATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285046.10
ENST00000468662.5
ENST00000476851.1
ENST00000487605.1
ENST00000543601.5
CDS GCA 72 bp GGACAGAAGGAAAAATTGACATTAAACACCACACTCTaGATAGTCATTTACTGTTATCTCCAATCTGAGATG +
Preference number: 6 (lower is better)
Translates to: GQKEKLTLNTTL*IVIYCYLQSEM
Trigger: CATCTCAGATTGGAGATAACAGTAAATGACTATGCAGAGTGTGGTGTTTAATGTCAATTTTTCCTTCTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS CAA 72 bp CACTTGCACTGTCTGTGCTATAAAGTTGCTAACAATTaGATGAGATATACCCAAAGAACACAGATGGATCTT +
Preference number: 6 (lower is better)
Translates to: HLHCLCYKVANN*MRYTQRTQMDL
Trigger: AAGATCCATCTGTGTTCTTTGGGTATATCTCATCAAATTGTTAGCAACTTTATAGCACAGACAGTGCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS CAA 90 bp CCTTCTATAACGAAGCAGAAGGTTTTGCTTTCTCATTATTCATCTTaGAAGAGGTTCATGAGCTATGTTGTTTCAAAACGAAGTCTAAGG +
Preference number: 6 (lower is better)
Translates to: PSITKQKVLLSHYSS*KRFMSYVVSKRSLR
Trigger: CCTTAGACTTCGTTTTGAAACAACATAGCTCATGAACCTCTTCAAAGATGAATAATGAGAAAGCAAAACCTTCTGCTTCGTTATAGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476851.1
CDS CAA 72 bp GATTGGGTAATTCCTTCTATAACGAAGCAGAAGGTTTaGCTTTCTCATTATTCATCTTTGAAGAGGTTCATG +
Preference number: 6 (lower is better)
Translates to: DWVIPSITKQKV*LSHYSSLKRFM
Trigger: CATGAACCTCTTCAAAGATGAATAATGAGAAAGCAAAACCTTCTGCTTCGTTATAGAAGGAATTACCCAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476851.1
CDS CCA 72 bp AATGCTTTTCCCTTAAAATTGGAAACAAGGCAAGAATaGTGTTCACTCTCATCAGTTCAATTCAACATTGTA +
Preference number: 6 (lower is better)
Translates to: NAFPLKLETRQE*CSLSSVQFNIV
Trigger: TACAATGTTGAATTGAACTGATGAGAGTGAACACCATTCTTGCCTTGTTTCCAATTTTAAGGGAAAAGCATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487605.1
CDS CAA 72 bp TTCTTTCCATGGATTTCATCAGTCAGTGACTCAGTTTaGCAGTTACTTCTGATCACATATTCTATACTCATT +
Preference number: 6 (lower is better)
Translates to: FFPWISSVSDSV*QLLLITYSILI
Trigger: AATGAGTATAGAATATGTGATCAGAAGTAACTGCAAAACTGAGTCACTGACTGATGAAATCCATGGAAAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487605.1