RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000146192

Ensembl transcript IDs: ENST00000274963.13, ENST00000373535.6, ENST00000459781.5, ENST00000464083.5, ENST00000470273.5, ENST00000487920.1, ENST00000487975.5, ENST00000489356.1, ENST00000493635.1, ENST00000494343.5, ENST00000497659.5

Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTaGGGCTCCAGCCACTGGCCGCCCGCTCCATGGCCTTCACCCAGC +
Preference number: 1 (lower is better)
Translates to: GWQWLSRTGPHRWAS*GSSHWPPAPWPSPS
Trigger: GCTGGGTGAAGGCCATGGAGCGGGCGGCCAGTGGCTGGAGCCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 90 bp AGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGCTCCAGCCACTaGCCGCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCT +
Preference number: 1 (lower is better)
Translates to: SRTGPHRWASWGSSH*PPAPWPSPSGPSAP
Trigger: AGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGCCAGTGGCTGGAGCCCCAGCTGGCCCAACGATGGGGACCTGTCCGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 90 bp GCAGGAGCTGGGTTCAGGGTGGGGAGAGGTGGGCAGGAGAGCGGCTaGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: AGAGFRVGRGGQESG*QWLSRTGPHRWASW
Trigger: CCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGCCCACCTCTCCCCACCCTGAACCCAGCTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 90 bp CCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTaGAGGTGTAGAGCTGGCCTGACTGCTGTAGCTGGAAGACCCGAG +
Preference number: 1 (lower is better)
Translates to: PWPSPSGPSAPPSRP*RCRAGLTAVAGRPE
Trigger: CTCGGGTCTTCCAGCTACAGCAGTCAGGCCAGCTCTACACCTTCAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 90 bp CGAAGCCTCGCTGCTCTGGATGCGAGTGAGAACCTCCTGGAAGAGTaGAGACTTGTCGGTCCAGGTGGCCAGCAGCTCAGCCGCTCGCTC +
Preference number: 1 (lower is better)
Translates to: RSLAALDASENLLEE*RLVGPGGQQLSRSL
Trigger: GAGCGAGCGGCTGAGCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCAGAGCAGCGAGGCTTCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 90 bp AGCTCCCGCACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTaGAACTGGGCGCCCACCTGGATCACCCAAGAAAAGGTAGCGCTC +
Preference number: 1 (lower is better)
Translates to: SSRTFIPATSMRVLT*NWAPTWITQEKVAL
Trigger: GAGCGCTACCTTTTCTTGGGTGATCCAGGTGGGCGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 90 bp AGGGTGTTAGAGGGGTCTACTATGTCGTCCTCGAGGCCCAGGCGCTaGTACACCTCCCACAGGTCCTGCAGCCGCTCCATCTCAGTGATG +
Preference number: 1 (lower is better)
Translates to: RVLEGSTMSSSRPRR*YTSHRSCSRSISVM
Trigger: CATCACTGAGATGGAGCGGCTGCAGGACCTGTGGGAGGTGTACCAGCGCCTGGGCCTCGAGGACGACATAGTAGACCCCTCTAACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 90 bp CAGCCGCTCCATCTCAGTGATGGCTGCATTGGAGTGCTGGGCAGCTaGGAAGATCATGTCCAGGGCTTTCTGGGCATCGGCCTGGTCTGG +
Preference number: 1 (lower is better)
Translates to: QPLHLSDGCIGVLGS*EDHVQGFLGIGLVW
Trigger: CCAGACCAGGCCGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGCAGCCATCACTGAGATGGAGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 90 bp TGCCCCGCCTCTTGTCCTCCTTGGCCTCAGGCAGCACATTTCCAGTaGGGAATGCGTAGCAGTGGAGGCAGACTCGGTTGGGCCTGTTGT +
Preference number: 1 (lower is better)
Translates to: CPASCPPWPQAAHFQ*GMRSSGGRLGWACC
Trigger: ACAACAGGCCCAACCGAGTCTGCCTCCACTGCTACGCATTCCTCACTGGAAATGTGCTGCCTGAGGCCAAGGAGGACAAGAGGCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 90 bp AGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTaGAAGCACCACTTGGGGCAGTGGGTCACTGAGGCCACAGGGTCA +
Preference number: 1 (lower is better)
Translates to: RSGHVAWAQMAESIL*KHHLGQWVTEATGS
Trigger: TGACCCTGTGGCCTCAGTGACCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR TCA 90 bp GCTCCTGCTCCTGGATGTCTCCCTCAGGCCCCTGGGCCGCAGCCTTaGAGGTTTCATTCCGCTTCTCGATTTGGTCAATGGCTGCTTGGA +
Preference number: 1 (lower is better)
Translates to: APAPGCLPQAPGPQP*RFHSASRFGQWLLG
Trigger: TCCAAGCAGCCATTGACCAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGACATCCAGGAGCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR GCA 90 bp CACAGGTCCTGCAGCCGCTCCATCTCAGTGATGGCTGCATTGGAGTaGTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCG +
Preference number: 1 (lower is better)
Translates to: HRSCSRSISVMAALE*WAAEKIMSRAFWAS
Trigger: CGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGCAGCCATCACTGAGATGGAGCGGCTGCAGGACCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 90 bp TGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTaGGGCAGTGGGTCACTGAGGCCACAGGGTCAGTCTGTGGCAGGA +
Preference number: 1 (lower is better)
Translates to: WPGRRWLNQFSESTT*GSGSLRPQGQSVAG
Trigger: TCCTGCCACAGACTGACCCTGTGGCCTCAGTGACCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR CCA 90 bp TCCTCAGACTGCAGCTCCTGCTCCTGGATGTCTCCCTCAGGCCCCTaGGCCGCAGCCTTGAAGGTTTCATTCCGCTTCTCGATTTGGTCA +
Preference number: 1 (lower is better)
Translates to: SSDCSSCSWMSPSGP*AAALKVSFRFSIWS
Trigger: TGACCAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGACATCCAGGAGCAGGAGCTGCAGTCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATaGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGTCA +
Preference number: 1 (lower is better)
Translates to: PYFLIPDRDTWPGRR*LNQFSESTTWGSGS
Trigger: TGACCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR CAA 90 bp GCAGGAGAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTaGGGCCAGCTGGGGCTCCAGCCACTGGCCGCCCGCTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: AGERLAVAQSDRSPS*GQLGLQPLAARSMA
Trigger: GGCCATGGAGCGGGCGGCCAGTGGCTGGAGCCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTGCAGGCCCGGCAGTGGTaGCGACGGCGCGTCAGAGCG +
Preference number: 2 (lower is better)
Translates to: ARSMAFTQRPFSSSVSALQARQW*RRRVRA
Trigger: CGCTCTGACGCGCCGTCGCCACCACTGCCGGGCCTG...CAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGCCGCAGGCCCGGCAGTaGTGGCGACGGCGCGTCAGA +
Preference number: 2 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGPQARQ*WRRRVR
Trigger: TCTGACGCGCCGTCGCCACCACTGCCGGGCCTGCGG...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGACCCGAGGGTCCCCCTaGGGCCCAACAGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGTRGSP*GPTVTW
Trigger: CCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGT...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GCAGGAGAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGGCACTGGAAGTCCCATaGCCCAGGAGCCCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: AGERLAVAQSDRSPSLGQALEVP*PRSPLP
Trigger: GGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC...CTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GCCGCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCAGCCCAGCAGGGGGATaGAGGTGTGAGCCCTCATGT +
Preference number: 2 (lower is better)
Translates to: AARSMAFTQRPFSSSVSASPAGG*RCEPSC
Trigger: ACATGAGGGCTCACACCTCCATCCCCCTGCTGGGCT...GGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR GCA 90 bp GCGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCGCTGCAGGGTCAGGCTaGCCGAAGCCTCGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: AHAHGHHLVPDPLRCPEAAAGSG*PKPRCS
Trigger: AGAGCAGCGAGGCTTCGGGCAGCCTGACCCTGCAGC...GGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGATGTCCAGGGCTTTCTaGGCATCGGCCTGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGMSRAF*ASAWSG
Trigger: CCCAGACCAGGCCGATGCCCAGAAAGCCCTGGACAT...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCTGCAGCTCCTGCTCCTaGATGTCTCCCTCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: RMHMVTILSRTHCGARRPCSSCS*MSPSGP
Trigger: GGGGCCTGAGGGAGACATCCAGGAGCAGGAGCTGCA...GGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR TCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGCCCCGCAAGGCAAACTaGGACACTTGGTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGPRKAN*DTWLSP
Trigger: AGGGGACAACCAAGTGTCTCAGTTTGCCTTGCGGGG...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAAGGGGGCCAGCTTCTaGATCACGTCACCGATGCGG +
Preference number: 2 (lower is better)
Translates to: RMHMVTILSRTHCGARRPKGASF*ITSPMR
Trigger: CCGCATCGGTGACGTGATCCAGAAGCTGGCCCCCTT...GGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp AAATCATTTCCTCCTGGGACCGGGCTTGCAGCTCCAGGGTGCGCTGCTTCCCGGCCAGATCGGGACACGTaGCCTGGGCGCAGATGGCTG +
Preference number: 2 (lower is better)
Translates to: KSFPPGTGLAAPGCAASRPDRDT*PGRRWL
Trigger: CAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG...CCGGGAAGCAGCGCACCCTGGAGCTGCAAGCCCGGTCCCAGGAGGAAATGATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR GCA 90 bp CACATCAGGCTCTGGTCAGGCGTGGCTGAGGACCCTTTCTCCAGGATGCCCCGCACCTCCCACAGGTCCTaGAGCCGCTCCATCTCAGTG +
Preference number: 2 (lower is better)
Translates to: HIRLWSGVAEDPFSRMPRTSHRS*SRSISV
Trigger: CACTGAGATGGAGCGGCTGCAGGACCTGTGGGAGGT...GCGGGGCATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR GCA 90 bp CACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAGCTCCTCAGACTGCAGCTCCTaGTCCTGGATGTCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: HMVTILSRTHCGARRPSSSDCSS*SWMSPS
Trigger: TGAGGGAGACATCCAGGAGCAGGAGCTGCAGTCTGA...GGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR GCA 90 bp GTAGCTGGAAGACCCGAGGGTCCCCCTGGGGCCCAACAGTCACCTGGTAGCCCAACCCTTTCTCCAGGATaGCCCGCCTCTTGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: VAGRPEGPPGAQQSPGSPTLSPG*PASCPP
Trigger: AGGAGGACAAGAGGCGGGGCATCCTGGAGAAAGGGT...TGGGCTACCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGTCTTCCAGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTGAACCTCCTGGAAGAGTaGAGACTTGTCGGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: ARSMAFTQRPFSSSVSALNLLEE*RLVGPG
Trigger: ACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTT...CAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGGACACCAGGAAGGAGTaGGGAAACTCAGCATCCATC +
Preference number: 2 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGDTRKE*GNSASI
Trigger: GATGGATGCTGAGTTTCCCCACTCCTTCCTGGTGTC...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR GCA 90 bp CCCAACAGTCACCTGGTAGCCCAGCAGGGGGATGGAGGTGTGAGCCCTCATGTCCCCAGCTCCTCAGACTaGAGCTCCTGCTCCTGGATG +
Preference number: 2 (lower is better)
Translates to: PNSHLVAQQGDGGVSPHVPSSSD*SSCSWM
Trigger: CATCCAGGAGCAGGAGCTGCAGTCTGAGGAGCTGGG...GACATGAGGGCTCACACCTCCATCCCCCTGCTGGGCTACCAGGTGACTGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp TGGGCCTGTTGTCGTCGTATTTCAGTTCGGCCCGGTAGTCGGAGCACCTGGCACCACCACTTGGGGCAGTaGGTCACTGAGGCCACAGGG +
Preference number: 2 (lower is better)
Translates to: WACCRRISVRPGSRSTWHHHLGQ*VTEATG
Trigger: CCCTGTGGCCTCAGTGACCCACTGCCCCAAGTGGTG...GTGCCAGGTGCTCCGACTACCGGGCCGAACTGAAATACGACGACAACAGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GTAGCTGGAAGACCCGAGGGTCCCCCTGGGGCCCAACAGTCACCTGGTAGCCCATCTGAAAGCACCACTTaGGGCAGTGGGTCACTGAGG +
Preference number: 2 (lower is better)
Translates to: VAGRPEGPPGAQQSPGSPSESTT*GSGSLR
Trigger: CCTCAGTGACCCACTGCCCCAAGTGGTGCTTTCAGA...TGGGCTACCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGTCTTCCAGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp ACCGGGCCCTCACGGAGCAGGGTGTTAGAGGGGTCTACTATGTCGTCCTCGAGGTCGGGACACGTGGCCTaGGCGCAGATGGCTGAATCA +
Preference number: 2 (lower is better)
Translates to: TGPSRSRVLEGSTMSSSRSGHVA*AQMAES
Trigger: TGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGA...CCTCGAGGACGACATAGTAGACCCCTCTAACACCCTGCTCCGTGAGGGCCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GTCGGAGCACCTGGCACACACCACATAGCCGCAGGCCCGGCAGTGGTGGCGACGCAGCAGCTCGTAACGTaGAATTCTCTGCACTGGTTC +
Preference number: 2 (lower is better)
Translates to: VGAPGTHHIAAGPAVVATQQLVT*NSLHWF
Trigger: GAACCAGTGCAGAGAATTCCACGTTACGAGCTGCTG...CGTCGCCACCACTGCCGGGCCTGCGGCTATGTGGTGTGTGCCAGGTGCTCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GTAGCTGGAAGACCCGAGGGTCCCCCTGGGGCCCAACAGTCACCTGGTAGCCCAGAAATCATTTCCTCCTaGGACCGGGCTTGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: VAGRPEGPPGAQQSPGSPEIISS*DRACSS
Trigger: GGAGCTGCAAGCCCGGTCCCAGGAGGAAATGATTTC...TGGGCTACCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGTCTTCCAGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp TGGGCCTGTTGTCGTCGTATTTCAGTTCGGCCCGGTAGTCGGAGCACCTGGCACTCTCCCTCAGGCCCCTaGGCCGCAGCCTTGAAGGTT +
Preference number: 2 (lower is better)
Translates to: WACCRRISVRPGSRSTWHSPSGP*AAALKV
Trigger: AACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGA...GTGCCAGGTGCTCCGACTACCGGGCCGAACTGAAATACGACGACAACAGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR TCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCGGCGGAAGGAGATCTTaGGGACCGGGCCCTCACGGA +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESGGRRS*GPGPHG
Trigger: TCCGTGAGGGCCCGGTCCTCAAGATCTCCTTCCGCC...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR GCA 90 bp CACATCAGGCTCTGGTCAGGCGTGGCTGAGGACCCTTTCTCCAGGATGCCCCGCCATCTCAGTGATGGCTaGATTGGAGTGCTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: HIRLWSGVAEDPFSRMPRHLSDG*IGVLGS
Trigger: GCTGCCCAGCACTCCAATGCAGCCATCACTGAGATG...GCGGGGCATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTGTTCCGCTTCTCGATTTaGTCAATGGCTGCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: ARSMAFTQRPFSSSVSALFRFSI*SMAAWK
Trigger: CTTCCAAGCAGCCATTGACCAAATCGAGAAGCGGAA...CAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGTGGGGCTCCAGCCACTaGCCGCCCGCTCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAWGSSH*PPAPWP
Trigger: AGGCCATGGAGCGGGCGGCCAGTGGCTGGAGCCCCA...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CAA 90 bp TCGCTGCTCTGGATGCGAGTGAGAACCTCCTGGAAGAGTGGAGACTaGTCGGTCCAGGTGGCCAGCAGCTCAGCCGCTCGCTCAAAGTTC +
Preference number: 2 (lower is better)
Translates to: SLLWMRVRTSWKSGD*SVQVASSSAARSKF
Trigger: GAACTTTGAGCGAGCGGCTGAGCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCAGAGCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR TCA 90 bp ACCGGGCCCTCACGGAGCAGGGTGTTAGAGGGGTCTACTATGTCGTCCTCGAGGTGCTCTGGATGCGAGTaGGAACCTCCTGGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: TGPSRSRVLEGSTMSSSRCSGCE*EPPGRV
Trigger: CACTCTTCCAGGAGGTTCTCACTCGCATCCAGAGCA...CCTCGAGGACGACATAGTAGACCCCTCTAACACCCTGCTCCGTGAGGGCCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR TCA 90 bp CACATCAGGCTCTGGTCAGGCGTGGCTGAGGACCCTTTCTCCAGGATGCCCCGCTCTGGATGTACTCCTTaGGCAGCAGCTCGTAACGTG +
Preference number: 2 (lower is better)
Translates to: HIRLWSGVAEDPFSRMPRSGCTP*AAARNV
Trigger: CACGTTACGAGCTGCTGCTCAAGGAGTACATCCAGA...GCGGGGCATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CACATCAGGCTCTGGTCAGGCGTGGCTGAGGACCCTTTCTCCAGGATGCCCCGCGCTGCATTGGAGTGCTaGGCAGCTGAGAAGATCATG +
Preference number: 2 (lower is better)
Translates to: HIRLWSGVAEDPFSRMPRAALEC*AAEKIM
Trigger: CATGATCTTCTCAGCTGCCCAGCACTCCAATGCAGC...GCGGGGCATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCCAACAGTCACCTGGTAGCCCAGCAGGGGGATGGAGGTGTGAGCCCTCATGTCGCCTCTTGTCCTCCTTaGCCTCAGGCAGCACATTTC +
Preference number: 2 (lower is better)
Translates to: PNSHLVAQQGDGGVSPHVASCPP*PQAAHF
Trigger: GAAATGTGCTGCCTGAGGCCAAGGAGGACAAGAGGC...GACATGAGGGCTCACACCTCCATCCCCCTGCTGGGCTACCAGGTGACTGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGCCTGACTGCTGTAGCTaGAAGACCCGAGGGTCCCCC +
Preference number: 2 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGPDCCS*KTRGSP
Trigger: GGGGGACCCTCGGGTCTTCCAGCTACAGCAGTCAGG...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CAA 90 bp AGCTCCTGCTCCTGGATGTCTCCCTCAGGCCCCTGGGCCGCAGCCTaGAAGGTTTCATTCCGCTTCTCGATTTGGTCAATGGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: SSCSWMSPSGPWAAA*KVSFRFSIWSMAAW
Trigger: CCAAGCAGCCATTGACCAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGACATCCAGGAGCAGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR TCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGGGTGGGAGCATCGCTTaGGGCTGGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGGGSIA*GWEFET
Trigger: GGTCTCAAACTCCCAGCCTCAAGCGATGCTCCCACC...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCAAAGGTAGCGCTCCATaGGGTCGTTGCGGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESKGSAP*GRCGGR
Trigger: CCTTCCGCCGCAACGACCCCATGGAGCGCTACCTTT...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CACATCAGGCTCTGGTCAGGCGTGGCTGAGGACCCTTTCTCCAGGATGCCCCGCTCTCGATTTGGTCAATaGCTGCTTGGAAGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: HIRLWSGVAEDPFSRMPRSRFGQ*LLGRPA
Trigger: TGCAGGCCTTCCAAGCAGCCATTGACCAAATCGAGA...GCGGGGCATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCGGTAGTCGGAGCACCTaGCACACACCACATAGCCGC +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESGSRST*HTPHSR
Trigger: GCGGCTATGTGGTGTGTGCCAGGTGCTCCGACTACC...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR TCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGCCCCGCAAGGCAAACTaGGACACTTGGTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGPRKAN*DTWLSP
Trigger: AGGGGACAACCAAGTGTCTCAGTTTGCCTTGCGGGG...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCCAGCACTTTGGGAGGTaGAGGTGGGAGCATCGCTTG +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESQHFGR*RWEHRL
Trigger: CAAGCGATGCTCCCACCTCCACCTCCCAAAGTGCTG...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR-3UTR GCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATTCCCGGCCACATCGATaGGGGTCCTCACCTGGAACT +
Preference number: 2 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNSRPHR*GSSPGT
Trigger: AGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGA...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR GCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCTTGTCCCCGATGAGCTaGAGGAAGCTGCACATCAGG +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESLSPMS*RKLHIR
Trigger: CCTGATGTGCAGCTTCCTGCAGCTCATCGGGGACAA...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCTCTGAAAGCACCACTTaGGGCAGTGGGTCACTGAGG +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESSESTT*GSGSLR
Trigger: CCTCAGTGACCCACTGCCCCAAGTGGTGCTTTCAGA...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATGTCTGGGGCCTGGGCTaGCAGCTTCTGGATGTACTC +
Preference number: 2 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNVWGLG*QLLDVL
Trigger: GAGTACATCCAGAAGCTGCCAGCCCAGGCCCCAGAC...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCGGAGGCAGACTCGGTTaGGCCTGTTGTCGTCGTATT +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESGGRLG*ACCRRI
Trigger: AATACGACGACAACAGGCCCAACCGAGTCTGCCTCC...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCTGGTCAATGGCTGCTTaGAAGGCCTGCATCCAGGAA +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESWSMAA*KACIQE
Trigger: TTCCTGGATGCAGGCCTTCCAAGCAGCCATTGACCA...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCTGGCCTGGGCGCAGATaGCTGAATCAATTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESWPGRR*LNQFSE
Trigger: TTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCA...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATTGGGCTGGCAGCTTCTaGATGTACTCCTTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNWAGSF*MYSLSS
Trigger: GCTGCTCAAGGAGTACATCCAGAAGCTGCCAGCCCA...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCCACCACTTGGGGCAGTaGGTCACTGAGGCCACAGGG +
Preference number: 2 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFHHLGQ*VTEATG
Trigger: CCCTGTGGCCTCAGTGACCCACTGCCCCAAGTGGTG...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTCGGGACACGTGGCCTaGGCGCAGATGGCTGAATCA +
Preference number: 2 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPSGHVA*AQMAES
Trigger: TGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR-3UTR CCA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTGCACTGGAAGTCCCATaGCCCAGGAGCCCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSALEVP*PRSPLP
Trigger: GGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR-3UTR CCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGGAAGCCTCGCTGCTCTaGATGCGAGTGAGAACCTCC +
Preference number: 2 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGEASLL*MRVRTS
Trigger: GGAGGTTCTCACTCGCATCCAGAGCAGCGAGGCTTC...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATGCCCATTTAAATCGGTaGTGGTACTTCAGTACAGGC +
Preference number: 2 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNAHLNR*WYFSTG
Trigger: GCCTGTACTGAAGTACCACCACCGATTTAAATGGGC...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR-3UTR CCA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCGTAATCCCAGCACTTTaGGAGGTGGAGGTGGGAGCA +
Preference number: 2 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFVIPAL*EVEVGA
Trigger: TGCTCCCACCTCCACCTCCCAAAGTGCTGGGATTAC...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR-3UTR CCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGCGAGTGAGAACCTCCTaGAAGAGTGGAGACTTGTCG +
Preference number: 2 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGRVRTS*KSGDLS
Trigger: CGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCG...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCATTTAAATCGGTGGTaGTACTTCAGTACAGGCATT +
Preference number: 2 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNHLNRW*YFSTGI
Trigger: AATGCCTGTACTGAAGTACCACCACCGATTTAAATG...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR CCA 72 bp GGTCCCCATCGTTGGGCCAGCTGGGGCTCCAGCCACTaGCCGCCCGCTCCATGGCCTTCACCCAGCGGCCCT +
Preference number: 3 (lower is better)
Translates to: GPHRWASWGSSH*PPAPWPSPSGP
Trigger: AGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGCCAGTGGCTGGAGCCCCAGCTGGCCCAACGATGGGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CAA 90 bp GCCGCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCCCCTGGGCCGCAGCCTaGAAGGTTTCATTCCGCTTC +
Preference number: 3 (lower is better)
Translates to: AARSMAFTQRPFSSSVSAPWAAA*KVSFRF
Trigger: GAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGG...GGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CAA 90 bp GCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTGCACATGGTCACCATCTaGTCCCGGACCCACTGCGGT +
Preference number: 3 (lower is better)
Translates to: ARSMAFTQRPFSSSVSALHMVTI*SRTHCG
Trigger: ACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG...CAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR GCA 72 bp CCATCAGCTCCCGCACCTTCATCCCGGCCACATCGATaGGGGTCCTCACCTGGAACTGGGCGCCCACCTGGA +
Preference number: 3 (lower is better)
Translates to: PSAPAPSSRPHR*GSSPGTGRPPG
Trigger: TCCAGGTGGGCGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGAGCTGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CAA 90 bp CGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCTGGAAGAGTGGAGACTaGTCGGTCCAGGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: RMHMVTILSRTHCGARRPWKSGD*SVQVAS
Trigger: GCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCA...GGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 72 bp GAGGGGTCTACTATGTCGTCCTCGAGGCCCAGGCGCTaGTACACCTCCCACAGGTCCTGCAGCCGCTCCATC +
Preference number: 3 (lower is better)
Translates to: EGSTMSSSRPRR*YTSHRSCSRSI
Trigger: GATGGAGCGGCTGCAGGACCTGTGGGAGGTGTACCAGCGCCTGGGCCTCGAGGACGACATAGTAGACCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CAA 90 bp TCCCTCAGGCCCCTGGGCCGCAGCCTTGAAGGTTTCATTCCGCTTCTCGATTTGCTCCTGGGACCGGGCTaGCAGCTCCAGGGTGCGCTG +
Preference number: 3 (lower is better)
Translates to: SLRPLGRSLEGFIPLLDLLLGPG*QLQGAL
Trigger: CAGCGCACCCTGGAGCTGCAAGCCCGGTCCCAGGAG...CAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CAA 90 bp TCCCTCAGGCCCCTGGGCCGCAGCCTTGAAGGTTTCATTCCGCTTCTCGATTTGCGGCGGAAGGAGATCTaGAGGACCGGGCCCTCACGG +
Preference number: 3 (lower is better)
Translates to: SLRPLGRSLEGFIPLLDLRRKEI*RTGPSR
Trigger: CCGTGAGGGCCCGGTCCTCAAGATCTCCTTCCGCCG...CAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CAA 90 bp GCGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCTTGGTCAATGGCTGCTaGGAAGGCCTGCATCCAGGA +
Preference number: 3 (lower is better)
Translates to: AHAHGHHLVPDPLRCPEALVNGC*EGLHPG
Trigger: TCCTGGATGCAGGCCTTCCAAGCAGCCATTGACCAA...GGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 72 bp CAGGAAGCTGCACATCAGGCTCTGGTCAGGCGTGGCTaGGGACCCTTTCTCCAGGATGCCCCGCCTCTTGTC +
Preference number: 3 (lower is better)
Translates to: QEAAHQALVRRG*GPFLQDAPPLV
Trigger: GACAAGAGGCGGGGCATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTGCAGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 72 bp TCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTaGAGGTGTAGAGCTGGCCTGACTGCTGTAGCTGGA +
Preference number: 3 (lower is better)
Translates to: SPSGPSAPPSRP*RCRAGLTAVAG
Trigger: TCCAGCTACAGCAGTCAGGCCAGCTCTACACCTTCAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 72 bp GCTGCTCTGGATGCGAGTGAGAACCTCCTGGAAGAGTaGAGACTTGTCGGTCCAGGTGGCCAGCAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: AALDASENLLEE*RLVGPGGQQLS
Trigger: GCTGAGCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCAGAGCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 72 bp GAAGCCTCGCTGCTCTGGATGCGAGTGAGAACCTCCTaGAAGAGTGGAGACTTGTCGGTCCAGGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: EASLLWMRVRTS*KSGDLSVQVAS
Trigger: GCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCAGAGCAGCGAGGCTTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 72 bp ACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTaGAACTGGGCGCCCACCTGGATCACCCAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: TFIPATSMRVLT*NWAPTWITQEK
Trigger: CTTTTCTTGGGTGATCCAGGTGGGCGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 72 bp TCCCCGATGAGCTGCAGGAAGCTGCACATCAGGCTCTaGTCAGGCGTGGCTGAGGACCCTTTCTCCAGGATG +
Preference number: 3 (lower is better)
Translates to: SPMSCRKLHIRL*SGVAEDPFSRM
Trigger: CATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTGCAGCTTCCTGCAGCTCATCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CAA 90 bp GCAGGAGAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGGGCAAACTGAGACACTaGGTTGTCCCCTTTCTAGAA +
Preference number: 3 (lower is better)
Translates to: AGERLAVAQSDRSPSLGQGKLRH*VVPFLE
Trigger: TTCTAGAAAGGGGACAACCAAGTGTCTCAGTTTGCC...CTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR-3UTR CAA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCGCTCCATGGGGTCGTaGCGGCGGAAGGAGATCTTG +
Preference number: 3 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNRSMGS*RRKEIL
Trigger: CAAGATCTCCTTCCGCCGCAACGACCCCATGGAGCG...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 72 bp CCTGGATGTCTCCCTCAGGCCCCTGGGCCGCAGCCTTaGAGGTTTCATTCCGCTTCTCGATTTGGTCAATGG +
Preference number: 3 (lower is better)
Translates to: PGCLPQAPGPQP*RFHSASRFGQW
Trigger: CCATTGACCAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGACATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 72 bp CATCTCAGTGATGGCTGCATTGGAGTGCTGGGCAGCTaGGAAGATCATGTCCAGGGCTTTCTGGGCATCGGC +
Preference number: 3 (lower is better)
Translates to: HLSDGCIGVLGS*EDHVQGFLGIG
Trigger: GCCGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGCAGCCATCACTGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR TCA 72 bp TCTTGTCCTCCTTGGCCTCAGGCAGCACATTTCCAGTaGGGAATGCGTAGCAGTGGAGGCAGACTCGGTTGG +
Preference number: 3 (lower is better)
Translates to: SCPPWPQAAHFQ*GMRSSGGRLGW
Trigger: CCAACCGAGTCTGCCTCCACTGCTACGCATTCCTCACTGGAAATGTGCTGCCTGAGGCCAAGGAGGACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 72 bp CGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTaGGGCAGTGGGTCACTGAGGCCACAGGGTCAGTCT +
Preference number: 3 (lower is better)
Translates to: RRWLNQFSESTT*GSGSLRPQGQS
Trigger: AGACTGACCCTGTGGCCTCAGTGACCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR CCA 72 bp AAACCATACTATGGTGACCACCAGTCCGGGGTTACCTaGGGCTTTCCCAGTTTTAGCACTGGAAGTCCCATG +
Preference number: 3 (lower is better)
Translates to: KPYYGDHQSGVT*GFPSFSTGSPM
Trigger: CATGGGACTTCCAGTGCTAAAACTGGGAAAGCCCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR-3UTR CAA 90 bp GCATTGGAGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGGCTCGCTCAAAGTTCTaGACATACTCACTGTACATC +
Preference number: 3 (lower is better)
Translates to: ALECWAAEKIMSRAFWASARSKF*TYSLYI
Trigger: GATGTACAGTGAGTATGTCAAGAACTTTGAGCGAGC...CGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CCA 72 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTaGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAA +
Preference number: 3 (lower is better)
Translates to: MDPYFLIPDRDT*PGRRWLNQFSE
Trigger: TTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGCAGGCCCGGCAGTGGTaGCGACGGCGCGTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGQARQW*RRRVRA
Trigger: CGCTCTGACGCGCCGTCGCCACCACTGCCGGGCCTG...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCCGCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCGCACTGGAAGTCCCATaGCCCAGGAGCCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AARSMAFTQRPFSSSVSAALEVP*PRSPLP
Trigger: GGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC...GGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAGCTCCTGGCCGCCCGCTCCATaGCCTTCACCCAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: HMVTILSRTHCGARRPSSWPPAP*PSPSGP
Trigger: AGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGCCA...GGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GTCCTCGAGGCCCAGGCGCTGGTACACCTCCCACAGGTCCTGCAGCCGCTCCATTGGGGCTCCAGCCACTaGCCGCCCGCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: VLEAQALVHLPQVLQPLHWGSSH*PPAPWP
Trigger: AGGCCATGGAGCGGGCGGCCAGTGGCTGGAGCCCCA...ATGGAGCGGCTGCAGGACCTGTGGGAGGTGTACCAGCGCCTGGGCCTCGAGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR GCA 90 bp CACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAGCTCCTCCTGGGACCGGGCTTaGAGCTCCAGGGTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HMVTILSRTHCGARRPSSSWDRA*SSRVRC
Trigger: GCAGCGCACCCTGGAGCTGCAAGCCCGGTCCCAGGA...GGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGACAGGTCCCCATCGTTaGGCCAGCTGGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGTGPHR*ASWGSS
Trigger: GCTGGAGCCCCAGCTGGCCCAACGATGGGGACCTGT...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp CACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAGCTCCGGCGGAAGGAGATCTTaGGGACCGGGCCCTCACGGA +
Preference number: 4 (lower is better)
Translates to: HMVTILSRTHCGARRPSSGGRRS*GPGPHG
Trigger: TCCGTGAGGGCCCGGTCCTCAAGATCTCCTTCCGCC...GGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR GCA 90 bp GTCGGAGCACCTGGCACACACCACATAGCCGCAGGCCCGGCAGTGGTGGCGACGCTTGCAGCTCCAGGGTaGGCTGCTTCCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: VGAPGTHHIAAGPAVVATLAAPG*AASRTP
Trigger: TGGTGTCCGGGAAGCAGCGCACCCTGGAGCTGCAAG...CGTCGCCACCACTGCCGGGCCTGCGGCTATGTGGTGTGTGCCAGGTGCTCCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCGAGAGCGGCTGGCAGTaGCTCAGTCGGACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AHAHGHHLVPDPLRCPEAESGWQ*LSRTGP
Trigger: GGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTC...GGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCGGGCAGGAGAGCGGCTaGCAGTGGCTCAGTCGGACA +
Preference number: 4 (lower is better)
Translates to: RMHMVTILSRTHCGARRPGQESG*QWLSRT
Trigger: TGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGCCC...GGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGTCAGGTACCTCCTGCTaGCTGTCCTGGGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGSGTSC*LSWAQT
Trigger: GGTCTGAGCCCAGGACAGTCAGCAGGAGGTACCTGA...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp TCCCGCACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTGGAACTGGGCGCTGCGTCCCCGATCCTaGGAGGGTCACAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SRTFIPATSMRVLTWNWALRPRS*EGHRLA
Trigger: TGCCAGCCTGTGACCCTCTCAGGATCGGGGACGCAG...CGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR GCA 90 bp GCTCCCGCACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTGGAACTGGGGCTGCAGGGTCAGGCTaGCCGAAGCCTCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: APAPSSRPHRCGSSPGTGAAGSG*PKPRCS
Trigger: AGAGCAGCGAGGCTTCGGGCAGCCTGACCCTGCAGC...CCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAGCTCCTGCAGCTCCTGCTCCTaGATGTCTCCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: HMVTILSRTHCGARRPSSCSSCS*MSPSGP
Trigger: GGGGCCTGAGGGAGACATCCAGGAGCAGGAGCTGCA...GGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTGCTGCACATCAGGCTCTaGTCAGGCGTGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ARSMAFTQRPFSSSVSALLHIRL*SGVAED
Trigger: GTCCTCAGCCACGCCTGACCAGAGCCTGATGTGCAG...CAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp TCCCGCACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTGGAACTGGGCGCCAGATCGGGACACGTaGCCTGGGCGCAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: SRTFIPATSMRVLTWNWAPDRDT*PGRRWL
Trigger: CAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG...CGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GCGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCGGAGTGCTGGGCAGCTaGGAAGATCATGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AHAHGHHLVPDPLRCPEAGVLGS*EDHVQG
Trigger: GCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCC...GGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GTCGGAGCACCTGGCACACACCACATAGCCGCAGGCCCGGCAGTGGTGGCGACGCCTGGGCCGCAGCCTTaGAGGTTTCATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGAPGTHHIAAGPAVVATPGPQP*RFHSAS
Trigger: AGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGG...CGTCGCCACCACTGCCGGGCCTGCGGCTATGTGGTGTGTGCCAGGTGCTCCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR GCA 90 bp CGAGTGAGAACCTCCTGGAAGAGTGGAGACTTGTCGGTCCAGGTGGCCAGCAGCTTGTCCCGGACCCACTaGGGTGCCCGGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RVRTSWKSGDLSVQVASSLSRTH*GARRPS
Trigger: GCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAA...GCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAGCTCCATGTCCAGGGCTTTCTaGGCATCGGCCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: HMVTILSRTHCGARRPSSMSRAF*ASAWSG
Trigger: CCCAGACCAGGCCGATGCCCAGAAAGCCCTGGACAT...GGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACAACAGGTCCCCATCGTTaGGCCAGCTGGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALEVPWPRSPLPARQTETTGPHR*ASWGSS
Trigger: GCTGGAGCCCCAGCTGGCCCAACGATGGGGACCTGT...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp GCCGCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTGTTCTGATCTTTCTTaGGGGCTCAGAAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: AARSMAFTQRPFSSSVSACSDLS*GLRRSA
Trigger: AGCCGACCTTCTGAGCCCTCAAGAAAGATCAGAACA...GGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR GCA 90 bp GCATTGGAGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGCCGGACCCACTGCGGTaGCCGGAGGCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALECWAAEKIMSRAFWASPDPLR*PEAQLL
Trigger: GAGGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGG...CGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCAGGAGAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCACACTCAGCCACGCTaGCCTGGGACAGATAGGCTA +
Preference number: 4 (lower is better)
Translates to: AGERLAVAQSDRSPSLGQHTQPR*PGTDRL
Trigger: TAGCCTATCTGTCCCAGGCCAGCGTGGCTGAGTGTG...CTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACACTAGCCTCTGGCCTCTaGGTGCTGCTTCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ALEVPWPRSPLPARQTETLASGL*VLLLGS
Trigger: GGACCCCAGAAGCAGCACCCAGAGGCCAGAGGCTAG...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCCAACAGTCACCTGGTAGCCCAGCAGGGGGATGGAGGTGTGAGCCCTCATGTCCTTCTCCCGTGGTCCTaGGGACTCGGGAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PNSHLVAQQGDGGVSPHVLLPWS*GLGRPA
Trigger: TGCAGGCCTCCCGAGTCCCCAGGACCACGGGAGAAG...GACATGAGGGCTCACACCTCCATCCCCCTGCTGGGCTACCAGGTGACTGTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GTAGCTGGAAGACCCGAGGGTCCCCCTGGGGCCCAACAGTCACCTGGTAGCCCAATTCGTCTTCTCCCGTaGTCCTGGGGACTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VAGRPEGPPGAQQSPGSPIRLLP*SWGLGR
Trigger: CCTCCCGAGTCCCCAGGACCACGGGAGAAGACGAAT...TGGGCTACCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGTCTTCCAGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCCGCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTCTCGATTTGGTCAATaGCTGCTTGGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AARSMAFTQRPFSSSVSASRFGQ*LLGRPA
Trigger: TGCAGGCCTTCCAAGCAGCCATTGACCAAATCGAGA...GGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGCCGCAGGCCCGGCAGTaGTGGCGACGGCGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGPQARQ*WRRRVR
Trigger: TCTGACGCGCCGTCGCCACCACTGCCGGGCCTGCGG...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp CCCAACAGTCACCTGGTAGCCCAGCAGGGGGATGGAGGTGTGAGCCCTCATGTCCTGCACTCAGGGCGGTaGTGCACGTCCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PNSHLVAQQGDGGVSPHVLHSGR*CTSSSL
Trigger: GAGGCTAGAGGACGTGCATCACCGCCCTGAGTGCAG...GACATGAGGGCTCACACCTCCATCCCCCTGCTGGGCTACCAGGTGACTGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp TCCCTCAGGCCCCTGGGCCGCAGCCTTGAAGGTTTCATTCCGCTTCTCGATTTGGGCGCGTCAGAGCGTTaGAGGGCTCCTGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SLRPLGRSLEGFIPLLDLGASER*RAPGSA
Trigger: TGCGCTGCCAGGAGCCCTTCAACGCTCTGACGCGCC...CAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp CGGGCCCTCACGGAGCAGGGTGTTAGAGGGGTCTACTATGTCGTCCTCGAGGCCCCCACTTGTCCCCGATaGGCTGCAGGAAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: RALTEQGVRGVYYVVLEAPTCPR*AAGSCT
Trigger: TGTGCAGCTTCCTGCAGCTCATCGGGGACAAGTGGG...GGCCTCGAGGACGACATAGTAGACCCCTCTAACACCCTGCTCCGTGAGGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACAGGTGGGAGCATCGCTTaGGGCTGGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ALEVPWPRSPLPARQTETGGSIA*GWEFET
Trigger: GGTCTCAAACTCCCAGCCTCAAGCGATGCTCCCACC...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACATTGCCCCCTTCATCCTaGCGGTTTCCGGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: ALEVPWPRSPLPARQTETLPPSS*RFPGWI
Trigger: GATCCACCCCGGAAACCGGCAGGATGAAGGGGGCAA...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp GCGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCATCTCAGTGATGGCTaGATTGGAGTGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AHAHGHHLVPDPLRCPEAHLSDG*IGVLGS
Trigger: GCTGCCCAGCACTCCAATGCAGCCATCACTGAGATG...GGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR GCA 90 bp CGGGCCCTCACGGAGCAGGGTGTTAGAGGGGTCTACTATGTCGTCCTCGAGGCCCCCAGCTCCTCAGACTaGAGCTCCTGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RALTEQGVRGVYYVVLEAPSSSD*SSCSWM
Trigger: CATCCAGGAGCAGGAGCTGCAGTCTGAGGAGCTGGG...GGCCTCGAGGACGACATAGTAGACCCCTCTAACACCCTGCTCCGTGAGGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR GCA 90 bp CGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCTTGTCCCCGATGAGCTaGAGGAAGCTGCACATCAGG +
Preference number: 4 (lower is better)
Translates to: RMHMVTILSRTHCGARRPLSPMS*RKLHIR
Trigger: CCTGATGTGCAGCTTCCTGCAGCTCATCGGGGACAA...GGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCTCCCGCACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTGGAACTGGGTGCCGGTTTCCGGGGTaGATCTCAGCTACCCTCGAA +
Preference number: 4 (lower is better)
Translates to: APAPSSRPHRCGSSPGTGCRFPG*ISATLE
Trigger: TTCGAGGGTAGCTGAGATCCACCCCGGAAACCGGCA...CCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp ACCGGGCCCTCACGGAGCAGGGTGTTAGAGGGGTCTACTATGTCGTCCTCGAGGCTAGCCTCTGGCCTCTaGGTGCTGCTTCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TGPSRSRVLEGSTMSSSRLASGL*VLLLGS
Trigger: GGACCCCAGAAGCAGCACCCAGAGGCCAGAGGCTAG...CCTCGAGGACGACATAGTAGACCCCTCTAACACCCTGCTCCGTGAGGGCCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACAATGTCCAGGGCTTTCTaGGCATCGGCCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALEVPWPRSPLPARQTETMSRAF*ASAWSG
Trigger: CCCAGACCAGGCCGATGCCCAGAAAGCCCTGGACAT...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTGGACACCAGGAAGGAGTaGGGAAACTCAGCATCCATC +
Preference number: 4 (lower is better)
Translates to: ARSMAFTQRPFSSSVSALDTRKE*GNSASI
Trigger: GATGGATGCTGAGTTTCCCCACTCCTTCCTGGTGTC...CAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGTGGTCAATGGCTGCTTaGAAGGCCTGCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGWSMAA*KACIQE
Trigger: TTCCTGGATGCAGGCCTTCCAAGCAGCCATTGACCA...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTCAGGCCCGGCAGTGGTaGCGACGGCGCGTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSQARQW*RRRVRA
Trigger: CGCTCTGACGCGCCGTCGCCACCACTGCCGGGCCTG...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp AGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGGCCTGGTACCCGAGGGTCCCCCTaGGGCCCAACAGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SAGQLRRSCPGLSGHRPGTRGSP*GPTVTW
Trigger: CCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGT...ACCAGGCCGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GCGCATGCACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCTCTGGATGTACTCCTTaGGCAGCAGCTCGTAACGTG +
Preference number: 4 (lower is better)
Translates to: AHAHGHHLVPDPLRCPEASGCTP*AAARNV
Trigger: CACGTTACGAGCTGCTGCTCAAGGAGTACATCCAGA...GGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTGCATGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGGGCGCGTCAGAGCGTTaGAGGGCTCCTGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGGASER*RAPGSA
Trigger: TGCGCTGCCAGGAGCCCTTCAACGCTCTGACGCGCC...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGAAAACCATACTATGGTaGCCACCAGTCCGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGKTILW*PPVRGY
Trigger: GTAACCCCGGACTGGTGGTCACCATAGTATGGTTTT...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR GCA 90 bp AAATCATTTCCTCCTGGGACCGGGCTTGCAGCTCCAGGGTGCGCTGCTTCCCGGTCCCGGCCACATCGATaGGGGTCCTCACCTGGAACT +
Preference number: 4 (lower is better)
Translates to: KSFPPGTGLAAPGCAASRSRPHR*GSSPGT
Trigger: AGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGA...CCGGGAAGCAGCGCACCCTGGAGCTGCAAGCCCGGTCCCAGGAGGAAATGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCAGGAGAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCGAGTGAGAACCTCCTaGAAGAGTGGAGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: AGERLAVAQSDRSPSLGQRVRTS*KSGDLS
Trigger: CGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCG...CTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCCGCAGGCCCGGCAGTaGTGGCGACGGCGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAPQARQ*WRRRVR
Trigger: TCTGACGCGCCGTCGCCACCACTGCCGGGCCTGCGG...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp TCCCGCACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTGGAACTGGGCGGGAGGCAGACTCGGTTaGGCCTGTTGTCGTCGTATT +
Preference number: 4 (lower is better)
Translates to: SRTFIPATSMRVLTWNWAGGRLG*ACCRRI
Trigger: AATACGACGACAACAGGCCCAACCGAGTCTGCCTCC...CGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTTGGGGCTCCAGCCACTaGCCGCCCGCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSWGSSH*PPAPWP
Trigger: AGGCCATGGAGCGGGCGGCCAGTGGCTGGAGCCCCA...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGGCACTGGAAGTCCCATaGCCCAGGAGCCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGALEVP*PRSPLP
Trigger: GGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR CAA 72 bp TGGATGCGAGTGAGAACCTCCTGGAAGAGTGGAGACTaGTCGGTCCAGGTGGCCAGCAGCTCAGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: WMRVRTSWKSGD*SVQVASSSAAR
Trigger: GCGAGCGGCTGAGCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCCTGCGTCCCCGATCCTaGGAGGGTCACAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESLRPRS*EGHRLA
Trigger: TGCCAGCCTGTGACCCTCTCAGGATCGGGGACGCAG...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp CACATCAGGCTCTGGTCAGGCGTGGCTGAGGACCCTTTCTCCAGGATGCCCCGCTGCTCTGGATGCGAGTaGGAACCTCCTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: HIRLWSGVAEDPFSRMPRCSGCE*EPPGRV
Trigger: CACTCTTCCAGGAGGTTCTCACTCGCATCCAGAGCA...GCGGGGCATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GTAGCTGGAAGACCCGAGGGTCCCCCTGGGGCCCAACAGTCACCTGGTAGCCCAGCAGCACATTTCCAGTaGGGAATGCGTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: VAGRPEGPPGAQQSPGSPAAHFQ*GMRSSG
Trigger: TCCACTGCTACGCATTCCTCACTGGAAATGTGCTGC...TGGGCTACCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGTCTTCCAGCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp TCCCTCAGGCCCCTGGGCCGCAGCCTTGAAGGTTTCATTCCGCTTCTCGATTTGCCTCCGTCTCGGCCTTaGAGGTGTAGAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLRPLGRSLEGFIPLLDLPPSRP*RCRAGL
Trigger: CAGGCCAGCTCTACACCTTCAAGGCCGAGACGGAGG...CAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CGGGCCCTCACGGAGCAGGGTGTTAGAGGGGTCTACTATGTCGTCCTCGAGGCCTGGGCTGGCAGCTTCTaGATGTACTCCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RALTEQGVRGVYYVVLEAWAGSF*MYSLSS
Trigger: GCTGCTCAAGGAGTACATCCAGAAGCTGCCAGCCCA...GGCCTCGAGGACGACATAGTAGACCCCTCTAACACCCTGCTCCGTGAGGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CGAGTGAGAACCTCCTGGAAGAGTGGAGACTTGTCGGTCCAGGTGGCCAGCAGCGTCTGGGGCCTGGGCTaGCAGCTTCTGGATGTACTC +
Preference number: 4 (lower is better)
Translates to: RVRTSWKSGDLSVQVASSVWGLG*QLLDVL
Trigger: GAGTACATCCAGAAGCTGCCAGCCCAGGCCCCAGAC...GCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp TCCCGCACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTGGAACTGGGCGGCTGCATTGGAGTGCTaGGCAGCTGAGAAGATCATG +
Preference number: 4 (lower is better)
Translates to: SRTFIPATSMRVLTWNWAAALEC*AAEKIM
Trigger: CATGATCTTCTCAGCTGCCCAGCACTCCAATGCAGC...CGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCTCGAGGCCCAGGCGCTaGTACACCTCCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESSRPRR*YTSHRS
Trigger: GGACCTGTGGGAGGTGTACCAGCGCCTGGGCCTCGA...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCATGCGGGTCCTCACCTaGAACTGGGCGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESMRVLT*NWAPTW
Trigger: CCAGGTGGGCGCCCAGTTCCAGGTGAGGACCCGCAT...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GATGCGAGTGAGAACCTCCTGGAAGAGTGGAGACTTGTCGGTCCAGGTGGCCAGTCTCCCTCAGGCCCCTaGGCCGCAGCCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: DASENLLEEWRLVGPGGQSPSGP*AAALKV
Trigger: AACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGA...CTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACAGTAATCCCAGCACTTTaGGAGGTGGAGGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ALEVPWPRSPLPARQTETVIPAL*EVEVGA
Trigger: TGCTCCCACCTCCACCTCCCAAAGTGCTGGGATTAC...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
3UTR CAA 72 bp GTGGCTGAGGACCCTTTCTCCAGGATGCCCCGCCTCTaGTCCTCCTTGGCCTCAGGCAGCACATTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VAEDPFSRMPRL*SSLASGSTFPV
Trigger: CACTGGAAATGTGCTGCCTGAGGCCAAGGAGGACAAGAGGCGGGGCATCCTGGAGAAAGGGTCCTCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGCTGGGGTATTCTCAAACACAGTaGCCAGGTTGGACACAGATG +
Preference number: 4 (lower is better)
Translates to: ERLAVAQSDRSPSLGQLGYSQTQ*PGWTQM
Trigger: CATCTGTGTCCAACCTGGTCACTGTGTTTGAGAATA...CCCCAGCTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCCTGCACTCAGGGCGGTaGTGCACGTCCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESLHSGR*CTSSSL
Trigger: GAGGCTAGAGGACGTGCATCACCGCCCTGAGTGCAG...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGTCCTGGGACCGGGCTTaGAGCTCCAGGGTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWASWDRA*SSRVRC
Trigger: GCAGCGCACCCTGGAGCTGCAAGCCCGGTCCCAGGA...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGATGCGGGTCCTCACCTaGAACTGGGCGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWMRVLT*NWAPTW
Trigger: CCAGGTGGGCGCCCAGTTCCAGGTGAGGACCCGCAT...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGTGCAGCTCCTGCTCCTaGATGTCTCCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGCSSCS*MSPSGP
Trigger: GGGGCCTGAGGGAGACATCCAGGAGCAGGAGCTGCA...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATACCCGAGGGTCCCCCTaGGGCCCAACAGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNTRGSP*GPTVTW
Trigger: CCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGT...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCCAACAGTCACCTGGTAGCCCAGCAGGGGGATGGAGGTGTGAGCCCTCATGTCTCTGAAAGCACCACTTaGGGCAGTGGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PNSHLVAQQGDGGVSPHVSESTT*GSGSLR
Trigger: CCTCAGTGACCCACTGCCCCAAGTGGTGCTTTCAGA...GACATGAGGGCTCACACCTCCATCCCCCTGCTGGGCTACCAGGTGACTGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTCCAGATCGGGACACGTaGCCTGGGCGCAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSPDRDT*PGRRWL
Trigger: CAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
3UTR CAA 72 bp GACCCTTTCTCCAGGATGCCCCGCCTCTTGTCCTCCTaGGCCTCAGGCAGCACATTTCCAGTGAGGAATGCG +
Preference number: 4 (lower is better)
Translates to: DPFSRMPRLLSS*ASGSTFPVRNA
Trigger: CGCATTCCTCACTGGAAATGTGCTGCCTGAGGCCAAGGAGGACAAGAGGCGGGGCATCCTGGAGAAAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACATGTTCTGATCTTTCTTaGGGGCTCAGAAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: ALEVPWPRSPLPARQTETCSDLS*GLRRSA
Trigger: AGCCGACCTTCTGAGCCCTCAAGAAAGATCAGAACA...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp GTAGCTGGAAGACCCGAGGGTCCCCCTGGGGCCCAACAGTCACCTGGTAGCCCACCCATGAATCTGTTCTaGTCTTTCTTGAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VAGRPEGPPGAQQSPGSPPMNLF*SFLRAQ
Trigger: CTGAGCCCTCAAGAAAGATCAGAACAGATTCATGGG...TGGGCTACCAGGTGACTGTTGGGCCCCAGGGGGACCCTCGGGTCTTCCAGCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCTCAGGTACCTCCTGCTaGCTGTCCTGGGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESSGTSC*LSWAQT
Trigger: GGTCTGAGCCCAGGACAGTCAGCAGGAGGTACCTGA...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATGGCGGAAGGAGATCTTaGGGACCGGGCCCTCACGGA +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNGGRRS*GPGPHG
Trigger: TCCGTGAGGGCCCGGTCCTCAAGATCTCCTTCCGCC...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGCCTCCGTCTCGGCCTTaGAGGTGTAGAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWPPSRP*RCRAGL
Trigger: CAGGCCAGCTCTACACCTTCAAGGCCGAGACGGAGG...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCGGAAGGCCTTGCTGCTaGGGGCTGTCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESGRPCC*GLSSAA
Trigger: AGCTGCTGAAGACAGCCCGCAGCAGCAAGGCCTTCC...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCCCTCTGGGAAGGCCTTaGTGCTGCGGGCTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESPLGRP*CCGLSS
Trigger: TGAAGACAGCCCGCAGCAGCAAGGCCTTCCCAGAGG...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTCTTGCAGCTCCAGGGTaGGCTGCTTCCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSLAAPG*AASRTP
Trigger: TGGTGTCCGGGAAGCAGCGCACCCTGGAGCTGCAAG...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACAGATTTGGTCAATGGCTaGTTGGAAGGCCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: ALEVPWPRSPLPARQTETDLVNG*LEGLHP
Trigger: TGGATGCAGGCCTTCCAAGCAGCCATTGACCAAATC...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCAAGGGGGCCAGCTTCTaGATCACGTCACCGATGCGG +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESKGASF*ITSPMR
Trigger: CCGCATCGGTGACGTGATCCAGAAGCTGGCCCCCTT...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTACTTGTCGGTCCAGGTaGCCAGCAGCTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSTCRSR*PAAQPL
Trigger: GAGCGGCTGAGCTGCTGGCCACCTGGACCGACAAGT...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp AGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGGCCTGGTGAAGCCTCGCTGCTCTaGATGCGAGTGAGAACCTCC +
Preference number: 4 (lower is better)
Translates to: SAGQLRRSCPGLSGHRPGEASLL*MRVRTS
Trigger: GGAGGTTCTCACTCGCATCCAGAGCAGCGAGGCTTC...ACCAGGCCGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGAACTGGGCGCCCACCTaGATCACCCTGGGCACACAG +
Preference number: 4 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWNWAPT*ITLGTQ
Trigger: CTGTGTGCCCAGGGTGATCCAGGTGGGCGCCCAGTT...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGGGTAGTCGGAGCACCTaGCACACACCACATAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGGSRST*HTPHSR
Trigger: GCGGCTATGTGGTGTGTGCCAGGTGCTCCGACTACC...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GCATTGGAGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGGGTAGTCGGAGCACCTaGCACACACCACATAGCCGC +
Preference number: 4 (lower is better)
Translates to: ALECWAAEKIMSRAFWASGSRST*HTPHSR
Trigger: GCGGCTATGTGGTGTGTGCCAGGTGCTCCGACTACC...CGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GCATTGGAGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGTCGGGACACGTGGCCTaGGCGCAGATGGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: ALECWAAEKIMSRAFWASSGHVA*AQMAES
Trigger: TGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGA...CGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGCCCACTTGTCCCCGATaGGCTGCAGGAAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWPTCPR*AAGSCT
Trigger: TGTGCAGCTTCCTGCAGCTCATCGGGGACAAGTGGG...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTTTGCCCCCTTCATCCTaGCGGTTTCCGGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSLPPSS*RFPGWI
Trigger: GATCCACCCCGGAAACCGGCAGGATGAAGGGGGCAA...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATTCGTCCAGGCGCCGCTaGAGCTCTGGGAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNSSRRR*SSGRKN
Trigger: GTTCTTCCTCCCAGAGCTGCAGCGGCGCCTGGACGA...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGTTGTCCCGGACCCACTaGGGTGCCCGGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGLSRTH*GARRPS
Trigger: GCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAA...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCCTTTCTCCAGGATaGCCCGCCTCTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESTLSPG*PASCPP
Trigger: AGGAGGACAAGAGGCGGGGCATCCTGGAGAAAGGGT...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCGACGATCTTCTTCTCTaGCTCCTGCGTCCCCGATCC +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESDDLLL*LLRPRS
Trigger: GGATCGGGGACGCAGGAGCCAGAGAAGAAGATCGTC...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATACTTGTCGGTCCAGGTaGCCAGCAGCTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNTCRSR*PAAQPL
Trigger: GAGCGGCTGAGCTGCTGGCCACCTGGACCGACAAGT...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp ACCGGGCCCTCACGGAGCAGGGTGTTAGAGGGGTCTACTATGTCGTCCTCGAGGCAGCAGCTCGTAACGTaGAATTCTCTGCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: TGPSRSRVLEGSTMSSSRQQLVT*NSLHWF
Trigger: GAACCAGTGCAGAGAATTCCACGTTACGAGCTGCTG...CCTCGAGGACGACATAGTAGACCCCTCTAACACCCTGCTCCGTGAGGGCCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGGTCTGGGGCCTGGGCTaGCAGCTTCTGGATGTACTC +
Preference number: 4 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWVWGLG*QLLDVL
Trigger: GAGTACATCCAGAAGCTGCCAGCCCAGGCCCCAGAC...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp AGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGGCCTGGTGCCTCTTGTCCTCCTTaGCCTCAGGCAGCACATTTC +
Preference number: 4 (lower is better)
Translates to: SAGQLRRSCPGLSGHRPGASCPP*PQAAHF
Trigger: GAAATGTGCTGCCTGAGGCCAAGGAGGACAAGAGGC...ACCAGGCCGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTCTGCACATCAGGCTCTaGTCAGGCGTGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSLHIRL*SGVAED
Trigger: GTCCTCAGCCACGCCTGACCAGAGCCTGATGTGCAG...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGAGCCCAGCAGGGGGATaGAGGTGTGAGCCCTCATGT +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWSPAGG*RCEPSC
Trigger: ACATGAGGGCTCACACCTCCATCCCCCTGCTGGGCT...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTAGCCCAGCAGGGGGATaGAGGTGTGAGCCCTCATGT +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSSPAGG*RCEPSC
Trigger: ACATGAGGGCTCACACCTCCATCCCCCTGCTGGGCT...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGTCGGGACACGTGGCCTaGGCGCAGATGGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWSGHVA*AQMAES
Trigger: TGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGA...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGTTTGGGAGGTGGAGGTaGGAGCATCGCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGFGRWR*EHRLRL
Trigger: CAGCCTCAAGCGATGCTCCCACCTCCACCTCCCAAA...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR TCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGTGCTCTGGATGCGAGTaGGAACCTCCTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGCSGCE*EPPGRV
Trigger: CACTCTTCCAGGAGGTTCTCACTCGCATCCAGAGCA...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCCCCGCAAGGCAAACTaGGACACTTGGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWPRKAN*DTWLSP
Trigger: AGGGGACAACCAAGTGTCTCAGTTTGCCTTGCGGGG...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGACCTCCCACAGGTCCTaGAGCCGCTCCATCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWATSHRS*SRSISV
Trigger: CACTGAGATGGAGCGGCTGCAGGACCTGTGGGAGGT...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCCCAGCTCCTCAGACTaGAGCTCCTGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNPSSSD*SSCSWM
Trigger: CATCCAGGAGCAGGAGCTGCAGTCTGAGGAGCTGGG...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGTGCCGGTTTCCGGGGTaGATCTCAGCTACCCTCGAA +
Preference number: 4 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWCRFPG*ISATLE
Trigger: TTCGAGGGTAGCTGAGATCCACCCCGGAAACCGGCA...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGTCCTCCAGGCTTCGCTaGACAGCTTGTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGSSRLR*TACSSG
Trigger: CCCTGAAGAACAAGCTGTCCAGCGAAGCCTGGAGGA...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGGAGAGGGTCACAGGCTaGCAAGATTTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGERVTG*QDFLQA
Trigger: AGCCTGGAGGAAATCTTGCCAGCCTGTGACCCTCTC...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGCGCCGCTGCAGCTCTaGGAGGAAGAACTGAGAATG +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWAPLQL*EEELRM
Trigger: CATTCTCAGTTCTTCCTCCCAGAGCTGCAGCGGCGC...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGAAGGGGGCCAGCTTCTaGATCACGTCACCGATGCGG +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAKGASF*ITSPMR
Trigger: CCGCATCGGTGACGTGATCCAGAAGCTGGCCCCCTT...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp AGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGGCCTGGTAACCTCCTGGAAGAGTaGAGACTTGTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SAGQLRRSCPGLSGHRPGNLLEE*RLVGPG
Trigger: ACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTT...ACCAGGCCGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGAAAGGTAGCGCTCCATaGGGTCGTTGCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAKGSAP*GRCGGR
Trigger: CCTTCCGCCGCAACGACCCCATGGAGCGCTACCTTT...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCTGGCCGCCCGCTCCATaGCCTTCACCCAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFWPPAP*PSPSGP
Trigger: AGGGCCGCTGGGTGAAGGCCATGGAGCGGGCGGCCA...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp TGGGCCTGTTGTCGTCGTATTTCAGTTCGGCCCGGTAGTCGGAGCACCTGGCACTGGCCTGGGCGCAGATaGCTGAATCAATTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: WACCRRISVRPGSRSTWHWPGRR*LNQFSE
Trigger: TTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCA...GTGCCAGGTGCTCCGACTACCGGGCCGAACTGAAATACGACGACAACAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CAA 72 bp TCCTGGATGTCTCCCTCAGGCCCCTGGGCCGCAGCCTaGAAGGTTTCATTCCGCTTCTCGATTTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: SWMSPSGPWAAA*KVSFRFSIWSM
Trigger: CATTGACCAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGACATCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR TCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCCTGGGCCGCAGCCTTaGAGGTTTCATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAPGPQP*RFHSAS
Trigger: AGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGG...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGCAGGTTGGACACAGATaGCAGCTTCTCCTCACTTGC +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGQVGHR*QLLLTC
Trigger: GCAAGTGAGGAGAAGCTGGCATCTGTGTCCAACCTG...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTCATCTCAGTGATGGCTaGATTGGAGTGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSHLSDG*IGVLGS
Trigger: GCTGCCCAGCACTCCAATGCAGCCATCACTGAGATG...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGTCAGACTGCAGCTCCTaGTCCTGGATGTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWSDCSS*SWMSPS
Trigger: TGAGGGAGACATCCAGGAGCAGGAGCTGCAGTCTGA...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCACACTCAGCCACGCTaGCCTGGGACAGATAGGCTA +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAHTQPR*PGTDRL
Trigger: TAGCCTATCTGTCCCAGGCCAGCGTGGCTGAGTGTG...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGTCTCCAGCAGCTCCTaGACGATCTTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWVSSSS*TIFFSG
Trigger: GCCAGAGAAGAAGATCGTCCAGGAGCTGCTGGAGAC...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGTGGGCTGGCAGCTTCTaGATGTACTCCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWWAGSF*MYSLSS
Trigger: GCTGCTCAAGGAGTACATCCAGAAGCTGCCAGCCCA...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGGCTGCATTGGAGTGCTaGGCAGCTGAGAAGATCATG +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGAALEC*AAEKIM
Trigger: CATGATCTTCTCAGCTGCCCAGCACTCCAATGCAGC...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAATCATTTCCTCCTaGGACCGGGCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSEIISS*DRACSS
Trigger: GGAGCTGCAAGCCCGGTCCCAGGAGGAAATGATTTC...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CGAGTGAGAACCTCCTGGAAGAGTGGAGACTTGTCGGTCCAGGTGGCCAGCAGCTTCCGCTTCTCGATTTaGTCAATGGCTGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RVRTSWKSGDLSVQVASSFRFSI*SMAAWK
Trigger: CTTCCAAGCAGCCATTGACCAAATCGAGAAGCGGAA...GCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGCCTCTTGTCCTCCTTaGCCTCAGGCAGCACATTTC +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWASCPP*PQAAHF
Trigger: GAAATGTGCTGCCTGAGGCCAAGGAGGACAAGAGGC...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGGGGCAGGAGAGCGGCTaGCAGTGGCTCAGTCGGACA +
Preference number: 4 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGGQESG*QWLSRT
Trigger: TGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGCCC...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTTCTGGATGTACTCCTTaGGCAGCAGCTCGTAACGTG +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSSGCTP*AAARNV
Trigger: CACGTTACGAGCTGCTGCTCAAGGAGTACATCCAGA...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGGCAGCACATTTCCAGTaGGGAATGCGTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWAAHFQ*GMRSSG
Trigger: TCCACTGCTACGCATTCCTCACTGGAAATGTGCTGC...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGCTGCAGGGTCAGGCTaGCCGAAGCCTCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPAAGSG*PKPRCS
Trigger: AGAGCAGCGAGGCTTCGGGCAGCCTGACCCTGCAGC...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGGATTTGGTCAATGGCTaGTTGGAAGGCCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGDLVNG*LEGLHP
Trigger: TGGATGCAGGCCTTCCAAGCAGCCATTGACCAAATC...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGTCAGACTGCAGCTCCTaGTCCTGGATGTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWASDCSS*SWMSPS
Trigger: TGAGGGAGACATCCAGGAGCAGGAGCTGCAGTCTGA...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTCCGGACCCACTGCGGTaGCCGGAGGCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSPDPLR*PEAQLL
Trigger: GAGGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGG...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATGAGAGGGTCACAGGCTaGCAAGATTTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNERVTG*QDFLQA
Trigger: AGCCTGGAGGAAATCTTGCCAGCCTGTGACCCTCTC...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCCAGCAGCTCGTAACGTaGAATTCTCTGCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESQQLVT*NSLHWF
Trigger: GAACCAGTGCAGAGAATTCCACGTTACGAGCTGCTG...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTCGAGGCCCAGGCGCTaGTACACCTCCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPSRPRR*YTSHRS
Trigger: GGACCTGTGGGAGGTGTACCAGCGCCTGGGCCTCGA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATGAAATCATTTCCTCCTaGGACCGGGCTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNEIISS*DRACSS
Trigger: GGAGCTGCAAGCCCGGTCCCAGGAGGAAATGATTTC...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTTGGTCAATGGCTGCTTaGAAGGCCTGCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSWSMAA*KACIQE
Trigger: TTCCTGGATGCAGGCCTTCCAAGCAGCCATTGACCA...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGCCTGACTGCTGTAGCTaGAAGACCCGAGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGPDCCS*KTRGSP
Trigger: GGGGGACCCTCGGGTCTTCCAGCTACAGCAGTCAGG...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGAGAGCGGCTGGCAGTaGCTCAGTCGGACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPESGWQ*LSRTGP
Trigger: GGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTC...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGCACCACTTGGGGCAGTaGGTCACTGAGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGHHLGQ*VTEATG
Trigger: CCCTGTGGCCTCAGTGACCCACTGCCCCAAGTGGTG...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGGTTGGACACAGATaGCAGCTTCTCCTCACTTGC +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAQVGHR*QLLLTC
Trigger: GCAAGTGAGGAGAAGCTGGCATCTGTGTCCAACCTG...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTCCTCTGGCCTCTGGGTaGTGCTTCTGGGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPPLASG*CFWGPA
Trigger: AGCAGGACCCCAGAAGCAGCACCCAGAGGCCAGAGG...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGACCTCCCACAGGTCCTaGAGCCGCTCCATCTCAGTG +
Preference number: 4 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGTSHRS*SRSISV
Trigger: CACTGAGATGGAGCGGCTGCAGGACCTGTGGGAGGT...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGCTGCTTGGAAGGCCTaGATCCAGGAAATCATTTCC +
Preference number: 4 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSAAWKA*IQEIIS
Trigger: GGAAATGATTTCCTGGATGCAGGCCTTCCAAGCAGC...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR GCA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGGCTGCTTGGAAGGCCTaGATCCAGGAAATCATTTCC +
Preference number: 4 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWAAWKA*IQEIIS
Trigger: GGAAATGATTTCCTGGATGCAGGCCTTCCAAGCAGC...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGAACCTCCTGGAAGAGTaGAGACTTGTCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWANLLEE*RLVGPG
Trigger: ACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTT...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCGAGTGAGAACCTCCTaGAAGAGTGGAGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNRVRTS*KSGDLS
Trigger: CGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCG...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCTTCCGCTTCTCGATTTaGTCAATGGCTGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESFRFSI*SMAAWK
Trigger: CTTCCAAGCAGCCATTGACCAAATCGAGAAGCGGAA...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTCTCCCTCAGGCCCCTaGGCCGCAGCCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPSPSGP*AAALKV
Trigger: AACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR TCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGCCCATGAATCTGTTCTaGTCTTTCTTGAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWPMNLF*SFLRAQ
Trigger: CTGAGCCCTCAAGAAAGATCAGAACAGATTCATGGG...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCGGAGTGCTGGGCAGCTaGGAAGATCATGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFGVLGS*EDHVQG
Trigger: GCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCC...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR TCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGAGAGCAGCATGTTGTTaGACAAGAAAAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGRAACC*TRKGSA
Trigger: AGCGCTACCTTTTCTTGTTCAACAACATGCTGCTCT...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTCCCGGCCACATCGATaGGGGTCCTCACCTGGAACT +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPSRPHR*GSSPGT
Trigger: AGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTATTCGTCTTCTCCCGTaGTCCTGGGGACTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPIRLLP*SWGLGR
Trigger: CCTCCCGAGTCCCCAGGACCACGGGAGAAGACGAAT...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCAAAGGTAGCGCTCCATaGGGTCGTTGCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFKGSAP*GRCGGR
Trigger: CCTTCCGCCGCAACGACCCCATGGAGCGCTACCTTT...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCTTCTTCTCTGGCTCCTaGGTCCCCGATCCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFFFSGS*VPDPER
Trigger: CCTCTCAGGATCGGGGACGCAGGAGCCAGAGAAGAA...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTCTTCTCCCGTGGTCCTaGGGACTCGGGAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSLLPWS*GLGRPA
Trigger: TGCAGGCCTCCCGAGTCCCCAGGACCACGGGAGAAG...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCGAAGCCTCGCTGCTCTaGATGCGAGTGAGAACCTCC +
Preference number: 4 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFEASLL*MRVRTS
Trigger: GGAGGTTCTCACTCGCATCCAGAGCAGCGAGGCTTC...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGGCCCATTTAAATCGGTaGTGGTACTTCAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAAHLNR*WYFSTG
Trigger: GCCTGTACTGAAGTACCACCACCGATTTAAATGGGC...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGTACTACTATCATGACTaGCACTTGACAGGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWYYYHD*HLTGAQ
Trigger: TTGAGCCCCTGTCAAGTGCCAGTCATGATAGTAGTA...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR TCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATTTATTACTACTATCATaGCTGGCACTTGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNLLLLS*LALDRG
Trigger: GCCCCTGTCAAGTGCCAGTCATGATAGTAGTAATAA...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTTGTCCCCGATGAGCTaGAGGAAGCTGCACATCAGG +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPLSPMS*RKLHIR
Trigger: CCTGATGTGCAGCTTCCTGCAGCTCATCGGGGACAA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTCCTCCAGGCTTCGCTaGACAGCTTGTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPSSRLR*TACSSG
Trigger: CCCTGAAGAACAAGCTGTCCAGCGAAGCCTGGAGGA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTCCTGGAAAAACACCTaGTCTAGCAGGTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPSWKNT*SSRWRR
Trigger: GCGCCTCCACCTGCTAGACCAGGTGTTTTTCCAGGA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGAGGCAGACTCGGTTaGGCCTGTTGTCGTCGTATT +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPGGRLG*ACCRRI
Trigger: AATACGACGACAACAGGCCCAACCGAGTCTGCCTCC...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCTCTGAAAGCACCACTTaGGGCAGTGGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFSESTT*GSGSLR
Trigger: CCTCAGTGACCCACTGCCCCAAGTGGTGCTTTCAGA...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGCATTTAAATCGGTGGTaGTACTTCAGTACAGGCATT +
Preference number: 4 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGHLNRW*YFSTGI
Trigger: AATGCCTGTACTGAAGTACCACCACCGATTTAAATG...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGAACTGGGCGCCCACCTaGATCACCCAAGAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGNWAPT*ITQEKV
Trigger: TACCTTTTCTTGGGTGATCCAGGTGGGCGCCCAGTT...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373535.6
3UTR CAA 72 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTaGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALDRGSTIGCGS*LSLFFIPGNPG
Trigger: GCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR GCA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTCTGGGAAGGCCTTGCTaGTGCGGGCTGTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSLGRPC*CGLSSA
Trigger: TGCTGAAGACAGCCCGCAGCAGCAAGGCCTTCCCAG...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGACACCAGGAAGGAGTaGGGAAACTCAGCATCCATC +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPDTRKE*GNSASI
Trigger: GATGGATGCTGAGTTTCCCCACTCCTTCCTGGTGTC...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGTCTCGATTTGGTCAATaGCTGCTTGGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGSRFGQ*LLGRPA
Trigger: TGCAGGCCTTCCAAGCAGCCATTGACCAAATCGAGA...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATAGGCTAAATCACCCATaGATCTGTTCTGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNRLNHP*ICSDLS
Trigger: AGAAAGATCAGAACAGATTCATGGGTGATTTAGCCT...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTCTGGGTGCTGCTTCTaGGGTCCTGCTATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPSGCCF*GPAILK
Trigger: TTTGAGAATAGCAGGACCCCAGAAGCAGCACCCAGA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTCCACCTGGATCACCCTaGGCACACAGTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSPPGSP*AHSRAA
Trigger: TGCTGCTCTACTGTGTGCCCAGGGTGATCCAGGTGG...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTTGGCCTGGGCGCAGATaGCTGAATCAATTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPWPGRR*LNQFSE
Trigger: TTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCA...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CCA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTCAGCACTTTGGGAGGTaGAGGTGGGAGCATCGCTTG +
Preference number: 4 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSQHFGR*RWEHRL
Trigger: CAAGCGATGCTCCCACCTCCACCTCCCAAAGTGCTG...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR TCA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGTATTCTCAAACACAGTaGCCAGGTTGGACACAGATG +
Preference number: 4 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGYSQTQ*PGWTQM
Trigger: CATCTGTGTCCAACCTGGTCACTGTGTTTGAGAATA...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR TCA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTAAAACCATACTATGGTaGCCACCAGTCCGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSKTILW*PPVRGY
Trigger: GTAACCCCGGACTGGTGGTCACCATAGTATGGTTTT...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CAA 90 bp GTCCTCGAGGCCCAGGCGCTGGTACACCTCCCACAGGTCCTGCAGCCGCTCCATCGGCGCGTCAGAGCGTaGAAGGGCTCCTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: VLEAQALVHLPQVLQPLHRRVRA*KGSWQR
Trigger: GCGCTGCCAGGAGCCCTTCAACGCTCTGACGCGCCG...ATGGAGCGGCTGCAGGACCTGTGGGAGGTGTACCAGCGCCTGGGCCTCGAGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS CCA 90 bp CTCAGACCCCACGGCCTCCCCGACATTCGTCTTCTCCCGTGGTCCTaGGGACTCGGGAGGCCTGCACTCAGGGCGGTGATGCACGTCCTC +
Preference number: 5 (lower is better)
Translates to: LRPHGLPDIRLLPWS*GLGRPALRAVMHVL
Trigger: GAGGACGTGCATCACCGCCCTGAGTGCAGGCCTCCCGAGTCCCCAGGACCACGGGAGAAGACGAATGTCGGGGAGGCCGTGGGGTCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS CCA 90 bp GCCCAGCACAGAGTGTGGCCTGGCAGGGACCTGGAGAAGAAGGCCTaGCCCTGCCCCACCCTCACAAGGATTCCCGTCTGGCAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: AQHRVWPGRDLEKKA*PCPTLTRIPVWQAG
Trigger: CCCTGCCTGCCAGACGGGAATCCTTGTGAGGGTGGGGCAGGGCCAGGCCTTCTTCTCCAGGTCCCTGCCAGGCCACACTCTGTGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 90 bp CTGCAGCTGTGGGTTAAGGGGAGTTGGGCAGGAATGGGCCCTTGGTaGCCTTCTTCCGCCCATCCTCCCAGGGCCTGGGGCCCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: LQLWVKGSWAGMGPW*PSSAHPPRAWGPVP
Trigger: GGGCACAGGGCCCCAGGCCCTGGGAGGATGGGCGGAAGAAGGTCACCAAGGGCCCATTCCTGCCCAACTCCCCTTAACCCACAGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS-3UTR CAA 90 bp GCACTGGAAGTCCCATGGCCCAGGAGCCCCCTCCCCGCAAGGCAAACTGAGACAGACAGGTCCCCATCGTaGGGCCAGCTGGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ALEVPWPRSPLPARQTETDRSPS*GQLGLQ
Trigger: CTGGAGCCCCAGCTGGCCCAACGATGGGGACCTGTC...TGTCTCAGTTTGCCTTGCGGGGAGGGGGCTCCTGGGCCATGGGACTTCCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS GCA 90 bp TTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAGCTCCTCAGACTaGAGCTGTGGGTTAAGGGGAGTTGGGCAGGAATGGGCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: LSRTHCGARRPSSSD*SCGLRGVGQEWALG
Trigger: ACCAAGGGCCCATTCCTGCCCAACTCCCCTTAACCCACAGCTGCAGTCTGAGGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CCA 90 bp CTCCCCCAGCCTCACCTGGATGCGAGTGAGAACCTCCTGGAAGAGTaGAGACTTGTCGGTCCAGGTGGCCAGCAGCTCAGCCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: LPQPHLDASENLLEE*RLVGPGGQQLSRSL
Trigger: GAGCGAGCGGCTGAGCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCAGGTGAGGCTGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464083.5
ENST00000470273.5
ENST00000493635.1
CDS CCA 90 bp CTCCAGCCCTCCCCCAGCCTCACCTGGATGCGAGTGAGAACCTCCTaGAAGAGTGGAGACTTGTCGGTCCAGGTGGCCAGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LQPSPSLTWMRVRTS*KSGDLSVQVASSSA
Trigger: GGCTGAGCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCAGGTGAGGCTGGGGGAGGGCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464083.5
ENST00000470273.5
ENST00000493635.1
CDS-3UTR CAA 90 bp GCCCGCTCCATGGCCTTCACCCAGCGGCCCTTCAGCTCCTCCGTCTCGGCCTTGGCTTCGCTGGACAGCTaGTTCTTCAGGGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: ARSMAFTQRPFSSSVSALASLDS*FFREFR
Trigger: CCTGAACTCCCTGAAGAACAAGCTGTCCAGCGAAGC...CAAGGCCGAGACGGAGGAGCTGAAGGGCCGCTGGGTGAAGGCCATGGAGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CAA 90 bp GCAGGAGAGCGGCTGGCAGTGGCTCAGTCGGACAGGTCCCCATCGTTGGGCCAGTGGAGGCAGACTCGGTaGGGCCTGTTGTCGTCGTAT +
Preference number: 5 (lower is better)
Translates to: AGERLAVAQSDRSPSLGQWRQTR*GLLSSY
Trigger: ATACGACGACAACAGGCCCAACCGAGTCTGCCTCCA...CTGGCCCAACGATGGGGACCTGTCCGACTGAGCCACTGCCAGCCGCTCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CAA 90 bp AAATCATTTCCTCCTGGGACCGGGCTTGCAGCTCCAGGGTGCGCTGCTTCCCGGCCGCTCTTGCCCCACTaGTCCCCGATGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KSFPPGTGLAAPGCAASRPLLPH*SPMSCR
Trigger: CCTGCAGCTCATCGGGGACAAGTGGGGCAAGAGCGG...CCGGGAAGCAGCGCACCCTGGAGCTGCAAGCCCGGTCCCAGGAGGAAATGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS TCA 90 bp CCCCACACCTCTACCTCAGCCCTCAGGCACCTGCGTCCCCGATCCTaGGAGGGTCACAGGCTGGCAAGATTTCCTCCAGGCTTCGCTGGA +
Preference number: 5 (lower is better)
Translates to: PHTSTSALRHLRPRS*EGHRLARFPPGFAG
Trigger: TCCAGCGAAGCCTGGAGGAAATCTTGCCAGCCTGTGACCCTCTCAGGATCGGGGACGCAGGTGCCTGAGGGCTGAGGTAGAGGTGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS CCA 90 bp TGGGTCAGGCTGCTCCTGAGGGCCGGACGAGTAGGCAGGGGCCTATaGAAGCAGCTGAGCCTGGGAGATGCCCGGAATCACTCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: WVRLLLRAGRVGRGL*KQLSLGDARNHSRQ
Trigger: TTGCCTTGAGTGATTCCGGGCATCTCCCAGGCTCAGCTGCTTCCATAGGCCCCTGCCTACTCGTCCGGCCCTCAGGAGCAGCCTGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464083.5
ENST00000470273.5
ENST00000493635.1
CDS CCA 90 bp AGCTCCTCAGACTGCAGCTGTGGGTTAAGGGGAGTTGGGCAGGAATaGGCCCTTGGTGACCTTCTTCCGCCCATCCTCCCAGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SSSDCSCGLRGVGQE*ALGDLLPPILPGPG
Trigger: CCCAGGCCCTGGGAGGATGGGCGGAAGAAGGTCACCAAGGGCCCATTCCTGCCCAACTCCCCTTAACCCACAGCTGCAGTCTGAGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS-3UTR CAA 90 bp TCCCGCACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTGGAACTGGGCGTCAGTGATGGCTGCATaGGAGTGCTGGGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SRTFIPATSMRVLTWNWASVMAA*ECWAAE
Trigger: CTCAGCTGCCCAGCACTCCAATGCAGCCATCACTGA...CGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGTGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS CCA 90 bp AATGCTCAGGCCCTGAGTCGGGGGATGCGCTGGGAAGGCTTCCCCTaGTCCCTTCAGTCTCTCCTGGCAGATGACACTCCCTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: NAQALSRGMRWEGFP*SLQSLLADDTPSPS
Trigger: AGAGGGAGAGGGAGTGTCATCTGCCAGGAGAGACTGAAGGGACCAGGGGAAGCCTTCCCAGCGCATCCCCCGACTCAGGGCCTGAGCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS-3UTR CAA 90 bp CACATGGTCACCATCTTGTCCCGGACCCACTGCGGTGCCCGGAGGCCCAGCTCCAACACAGTGACCAGGTaGGACACAGATGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: HMVTILSRTHCGARRPSSNTVTR*DTDASF
Trigger: GAAGCTGGCATCTGTGTCCAACCTGGTCACTGTGTT...GGAGCTGGGCCTCCGGGCACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CAA 90 bp GCATTGGAGTGCTGGGCAGCTGAGAAGATCATGTCCAGGGCTTTCTGGGCATCGCGGCGGAAGGAGATCTaGAGGACCGGGCCCTCACGG +
Preference number: 5 (lower is better)
Translates to: ALECWAAEKIMSRAFWASRRKEI*RTGPSR
Trigger: CCGTGAGGGCCCGGTCCTCAAGATCTCCTTCCGCCG...CGATGCCCAGAAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CAA 90 bp CGAGTGAGAACCTCCTGGAAGAGTGGAGACTTGTCGGTCCAGGTGGCCAGCAGCCGCTCCATGGGGTCGTaGCGGCGGAAGGAGATCTTG +
Preference number: 5 (lower is better)
Translates to: RVRTSWKSGDLSVQVASSRSMGS*RRKEIL
Trigger: CAAGATCTCCTTCCGCCGCAACGACCCCATGGAGCG...GCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CAA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTCTCCTGGGACCGGGCTaGCAGCTCCAGGGTGCGCTG +
Preference number: 5 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSLLGPG*QLQGAL
Trigger: CAGCGCACCCTGGAGCTGCAAGCCCGGTCCCAGGAG...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS TCA 90 bp GGGGCCTGGGAAGACTCAGAGAGGAACACTGGGTGCCGCAAGGTGTaGCTGCGAGGAAGACTTGGCTTTATGGGGAGCCCAGATGTGGGC +
Preference number: 5 (lower is better)
Translates to: GAWEDSERNTGCRKV*LRGRLGFMGSPDVG
Trigger: GCCCACATCTGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGTTCCTCTCTGAGTCTTCCCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 90 bp TTCTTCTCTGGCTCCTCAGCCCTCAGGCACCTGCGTCCCCGATCCTaGGAGGGTCACAGGCTGGCAAGATTTCCTCCAGGCTTCGCTGGA +
Preference number: 5 (lower is better)
Translates to: FFSGSSALRHLRPRS*EGHRLARFPPGFAG
Trigger: TCCAGCGAAGCCTGGAGGAAATCTTGCCAGCCTGTGACCCTCTCAGGATCGGGGACGCAGGTGCCTGAGGGCTGAGGAGCCAGAGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497659.5
CDS CCA 90 bp GGGGGATGCGCTGGGAAGGCTTCCCCTGGTCCCTTCAGTCTCTCCTaGCAGATGACACTCCCTCTCCCTCTGAGCTGGTATAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: GGCAGKASPGPFSLS*QMTLPLPLSWYRQN
Trigger: GTTCTGCCTATACCAGCTCAGAGGGAGAGGGAGTGTCATCTGCCAGGAGAGACTGAAGGGACCAGGGGAAGCCTTCCCAGCGCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CCA 90 bp CAGCCCTCAGGCACCTGCGTCCCCGATCCTGAGAGGGTCACAGGCTaGCAAGATTTCCTCCAGGCTTCGCTGGACAGCTTGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QPSGTCVPDPERVTG*QDFLQASLDSLFFR
Trigger: CCTGAAGAACAAGCTGTCCAGCGAAGCCTGGAGGAAATCTTGCCAGCCTGTGACCCTCTCAGGATCGGGGACGCAGGTGCCTGAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489356.1
ENST00000497659.5
CDS-3UTR CAA 90 bp CACATCAGGCTCTGGTCAGGCGTGGCTGAGGACCCTTTCTCCAGGATGCCCCGCTTGGTCAATGGCTGCTaGGAAGGCCTGCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: HIRLWSGVAEDPFSRMPRLVNGC*EGLHPG
Trigger: TCCTGGATGCAGGCCTTCCAAGCAGCCATTGACCAA...GCGGGGCATCCTGGAGAAAGGGTCCTCAGCCACGCCTGACCAGAGCCTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS TCA 90 bp TCATGTCCAGGGCTTCTGAAAGGGGCAGGGCCGGAGTTTATTCCCTaGGAATCTAGGGCTGGTGGCTGGGGCAGGAGGTCTCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: SCPGLLKGAGPEFIP*ESRAGGWGRRSLGI
Trigger: GATGCCCAGAGACCTCCTGCCCCAGCCACCAGCCCTAGATTCTCAGGGAATAAACTCCGGCCCTGCCCCTTTCAGAAGCCCTGGACATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464083.5
CDS GCA 90 bp CCTGGGAAGACTCAGAGAGGAACACTGGGTGCCGCAAGGTGTGACTaGGAGGAAGACTTGGCTTTATGGGGAGCCCAGATGTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: PGKTQRGTLGAARCD*EEDLALWGAQMWAW
Trigger: CCACGCCCACATCTGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGTTCCTCTCTGAGTCTTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 90 bp ACACTGGGTGCCGCAAGGTGTGACTGCGAGGAAGACTTGGCTTTATaGGGAGCCCAGATGTGGGCGTGGAGATGGAGGGCAGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: TLGAARCDCEEDLAL*GAQMWAWRWRAGER
Trigger: CCTTTCTCCTGCCCTCCATCTCCACGCCCACATCTGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 90 bp AGAGAGGAACACTGGGTGCCGCAAGGTGTGACTGCGAGGAAGACTTaGCTTTATGGGGAGCCCAGATGTGGGCGTGGAGATGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: REEHWVPQGVTARKT*LYGEPRCGRGDGGQ
Trigger: CTGCCCTCCATCTCCACGCCCACATCTGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGTTCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS-3UTR CAA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCGGCGGAAGGAGATCTaGAGGACCGGGCCCTCACGG +
Preference number: 5 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNRRKEI*RTGPSR
Trigger: CCGTGAGGGCCCGGTCCTCAAGATCTCCTTCCGCCG...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS TCA 90 bp GGCAGGCAGGGGAGACAGAAACTGGCACCCGAACCACCGAAAGGATaGCTCACTGGCTCAGCAGGCACGAAGATCTGCACAGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: GRQGRQKLAPEPPKG*LTGSAGTKICTGKR
Trigger: TCTCTTGCCTGTGCAGATCTTCGTGCCTGCTGAGCCAGTGAGTCATCCTTTCGGTGGTTCGGGTGCCAGTTTCTGTCTCCCCTGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS GCA 90 bp GGTTGGACACAGATGCCAGCTTCTCCTCACTTGCCCCCTTCATCCTaGCGGTTTCCGGGGTGGATCTCAGCTACCCTCGAAGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GWTQMPASPHLPPSS*RFPGWISATLEAER
Trigger: TCTCTCTGCTTCGAGGGTAGCTGAGATCCACCCCGGAAACCGGCAGGATGAAGGGGGCAAGTGAGGAGAAGCTGGCATCTGTGTCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS GCA 90 bp CACAGGTCCTGCAGCCGCTCCATCTCAGTGATGGCTGCATTGGAGTaGTGGGCAGCTGAGAAGATCATGTCCAGGGCTTCTGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: HRSCSRSISVMAALE*WAAEKIMSRASERG
Trigger: GCCCCTTTCAGAAGCCCTGGACATGATCTTCTCAGCTGCCCAGCACTCCAATGCAGCCATCACTGAGATGGAGCGGCTGCAGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464083.5
ENST00000493635.1
CDS GCA 90 bp GGTTGGTGGCTCCAGCAAGGGATGAAAAAGCCTTCATTTACCTCCTaGTCCTGGATGTCTCCCTCAGGCCCCTGGGCCGCAGCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GWWLQQGMKKPSFTS*SWMSPSGPWAAALK
Trigger: CTTCAAGGCTGCGGCCCAGGGGCCTGAGGGAGACATCCAGGAGCAGGAGGTAAATGAAGGCTTTTTCATCCCTTGCTGGAGCCACCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS GCA 90 bp ATGAAGATACCGTGTAGGCCAGCAAGGGCCAGCTGGTGTGTTCTCTaGTATACAGGGGCCAGCCTGGGCACCACAGGCAGAATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: MKIPCRPARASWCVL*YTGASLGTTGRMGS
Trigger: ACTCCCCATTCTGCCTGTGGTGCCCAGGCTGGCCCCTGTATAGCAGAGAACACACCAGCTGGCCCTTGCTGGCCTACACGGTATCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS CCA 90 bp GGGAGGCTGGGTAAAAGGGGCCTGGGAAGACTCAGAGAGGAACACTaGGTGCCGCAAGGTGTGACTGCGAGGAAGACTTGGCTTTATGGG +
Preference number: 5 (lower is better)
Translates to: GRLGKRGLGRLREEH*VPQGVTARKTWLYG
Trigger: CCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGTTCCTCTCTGAGTCTTCCCAGGCCCCTTTTACCCAGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS-3UTR CAA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGCCCTGGGCCGCAGCCTaGAAGGTTTCATTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGPWAAA*KVSFRF
Trigger: GAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGG...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp CCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCCCCTGGGCCGCAGCCTaGAAGGTTTCATTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PDRDTWPGRRWLNQFSESPWAAA*KVSFRF
Trigger: GAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGG...GCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCCGCTCTTGCCCCACTaGTCCCCGATGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAPLLPH*SPMSCR
Trigger: CCTGCAGCTCATCGGGGACAAGTGGGGCAAGAGCGG...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS TCA 90 bp TCATGTCCAGGGCTTCTGAAAGGGGCAGGGCCGGAGTTTATTCCCTaGGAATCTAGGGCTGGTGGCTGGGGCAGGAGGTCCTTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SCPGLLKGAGPEFIP*ESRAGGWGRRSLKF
Trigger: GAACTTCAAGGACCTCCTGCCCCAGCCACCAGCCCTAGATTCTCAGGGAATAAACTCCGGCCCTGCCCCTTTCAGAAGCCCTGGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS GCA 90 bp AAACACAGTGACCAGGTTGGACACAGATGCCAGCTTCTCCTCACTTaGCCCCTTCATCCTGCCGGTTTCCGGGGTGGATCTCAGCTACCC +
Preference number: 5 (lower is better)
Translates to: KHSDQVGHRCQLLLT*PLHPAGFRGGSQLP
Trigger: GGGTAGCTGAGATCCACCCCGGAAACCGGCAGGATGAAGGGGGCAAGTGAGGAGAAGCTGGCATCTGTGTCCAACCTGGTCACTGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS CCA 90 bp TTCTTCTCTGGCTCCTGCGTCCCCGATCCTGAGAGGGTCACAGGCTaGCAAGATTTCCTCCAGGCTTCGCTGGACAGCTTGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: FFSGSCVPDPERVTG*QDFLQASLDSLFFR
Trigger: CCTGAAGAACAAGCTGTCCAGCGAAGCCTGGAGGAAATCTTGCCAGCCTGTGACCCTCTCAGGATCGGGGACGCAGGAGCCAGAGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274963.13
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
CDS CCA 90 bp GGCTCCTGGTGGACCTCACCAGTCGTCCAGGCGCCGCTGCAGCTCTaGGAGGAAGAACTGAGAATGGAACTGATAGATGGAGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: GSWWTSPVVQAPLQL*EEELRMELIDGGDV
Trigger: AACATCTCCTCCATCTATCAGTTCCATTCTCAGTTCTTCCTCCCAGAGCTGCAGCGGCGCCTGGACGACTGGTGAGGTCCACCAGGAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459781.5
CDS CCA 90 bp GGGGAGACAGAAACTGGCACCCGAACCACCGAAAGGATGACTCACTaGCTCAGCAGGCACGAAGATCTGCACAGGCAAGAGAAACCCACG +
Preference number: 5 (lower is better)
Translates to: GETETGTRTTERMTH*LSRHEDLHRQEKPT
Trigger: CGTGGGTTTCTCTTGCCTGTGCAGATCTTCGTGCCTGCTGAGCCAGTGAGTCATCCTTTCGGTGGTTCGGGTGCCAGTTTCTGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 90 bp GCCCAGCTTTTGTCCTCTCCTGACCCTGAGAGCCACACTGTTACCTaGCAGACAGGCCCTCCACACACAGGGTGTGTCTTTCAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: AQLLSSPDPESHTVT*QTGPPHTGCVFQVP
Trigger: TGGGACTTGAAAGACACACCCTGTGTGTGGAGGGCCTGTCTGCCAGGTAACAGTGTGGCTCTCAGGGTCAGGAGAGGACAAAAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS-3UTR CAA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGCTCCTGGGACCGGGCTaGCAGCTCCAGGGTGCGCTG +
Preference number: 5 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGLLGPG*QLQGAL
Trigger: CAGCGCACCCTGGAGCTGCAAGCCCGGTCCCAGGAG...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCACATGGTCACCATCTaGTCCCGGACCCACTGCGGT +
Preference number: 5 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWHMVTI*SRTHCG
Trigger: ACCGCAGTGGGTCCGGGACAAGATGGTGACCATGTG...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS GCA 90 bp TGGGGTCCTGCTATTCTCAAACACAGTGACCAGGTTGGACACAGATaGCAGCTTCTCCTCACTTGCCCCCTTCATCCTGCCGGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: WGPAILKHSDQVGHR*QLLLTCPLHPAGFR
Trigger: CCGGAAACCGGCAGGATGAAGGGGGCAAGTGAGGAGAAGCTGGCATCTGTGTCCAACCTGGTCACTGTGTTTGAGAATAGCAGGACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS CCA 90 bp GATGCGGGGGTTAGCTGTCCAGTCGTCCAGGCGCCGCTGCAGCTCTaGGAGGAAGAACTGAGAATGGAACTGATAGATGGAGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: DAGVSCPVVQAPLQL*EEELRMELIDGGDV
Trigger: AACATCTCCTCCATCTATCAGTTCCATTCTCAGTTCTTCCTCCCAGAGCTGCAGCGGCGCCTGGACGACTGGACAGCTAACCCCCGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000464083.5
CDS CCA 90 bp GTTCTGGTCCCAGGTTGGCCTCATCCACAAGGCCCGGCACAGTGTTaGGCCCACAGCAGGTGTTCAGTAACTGCTCAGTGCTTCATTATG +
Preference number: 5 (lower is better)
Translates to: VLVPGWPHPQGPAQC*AHSRCSVTAQCFIM
Trigger: CATAATGAAGCACTGAGCAGTTACTGAACACCTGCTGTGGGCCCAACACTGTGCCGGGCCTTGTGGATGAGGCCAACCTGGGACCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470273.5
ENST00000494343.5
CDS-3UTR CAA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATTGGAAGAGTGGAGACTaGTCGGTCCAGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNWKSGD*SVQVAS
Trigger: GCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCA...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGTGGAAGAGTGGAGACTaGTCGGTCCAGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAWKSGD*SVQVAS
Trigger: GCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCA...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp TCCCTCAGGCCCCTGGGCCGCAGCCTTGAAGGTTTCATTCCGCTTCTCGATTTGACTCGGTTGGGCCTGTaGTCGTCGTATTTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: SLRPLGRSLEGFIPLLDLTRLGL*SSYFSS
Trigger: CGAACTGAAATACGACGACAACAGGCCCAACCGAGT...CAAATCGAGAAGCGGAATGAAACCTTCAAGGCTGCGGCCCAGGGGCCTGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS CCA 90 bp AGTGGACACAGTACCCTCCTCAAGAAGCTGGTAGCTCACCCGCACTaGATGCCCTGCCTGAGTTATGGAGGAGGGGGAAAGAAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: SGHSTLLKKLVAHPH*MPCLSYGGGGKKKR
Trigger: CCTCTTTTTCTTTCCCCCTCCTCCATAACTCAGGCAGGGCATCCAGTGCGGGTGAGCTACCAGCTTCTTGAGGAGGGTACTGTGTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS-3UTR CAA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGGCTTCGCTGGACAGCTaGTTCTTCAGGGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWASLDS*FFREFR
Trigger: CCTGAACTCCCTGAAGAACAAGCTGTCCAGCGAAGC...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp TGGGCCTGTTGTCGTCGTATTTCAGTTCGGCCCGGTAGTCGGAGCACCTGGCACATTCCGCTTCTCGATTaGGTCAATGGCTGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: WACCRRISVRPGSRSTWHIPLLD*VNGCLE
Trigger: TTCCAAGCAGCCATTGACCAAATCGAGAAGCGGAAT...GTGCCAGGTGCTCCGACTACCGGGCCGAACTGAAATACGACGACAACAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS-3UTR CAA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGACAGGTCCCCATCGTaGGGCCAGCTGGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPDRSPS*GQLGLQ
Trigger: CTGGAGCCCCAGCTGGCCCAACGATGGGGACCTGTC...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CAA 90 bp CGAGTGAGAACCTCCTGGAAGAGTGGAGACTTGTCGGTCCAGGTGGCCAGCAGCGGCAAACTGAGACACTaGGTTGTCCCCTTTCTAGAA +
Preference number: 5 (lower is better)
Translates to: RVRTSWKSGDLSVQVASSGKLRH*VVPFLE
Trigger: TTCTAGAAAGGGGACAACCAAGTGTCTCAGTTTGCC...GCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373535.6
CDS TCA 90 bp CTGGTGAAGGCCATCGAGGAAGAGGACAGAAGAACTGGCTGCCTCTaGGGGCAAAGCAGTGGTGACCTAGAGTCAGGGCACAATTCTGAA +
Preference number: 5 (lower is better)
Translates to: LVKAIEEEDRRTGCL*GQSSGDLESGHNSE
Trigger: TTCAGAATTGTGCCCTGACTCTAGGTCACCACTGCTTTGCCCTCAGAGGCAGCCAGTTCTTCTGTCCTCTTCCTCGATGGCCTTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CCA 90 bp GGTAGTAATACACACACCTGGCTCAGAGCTAGTGCCCAACACCACTaGGCTGCATTGGTTGAAGCCAGCAGATTTGGCCAAGATGGGGAC +
Preference number: 5 (lower is better)
Translates to: GSNTHTWLRASAQHH*AALVEASRFGQDGD
Trigger: GTCCCCATCTTGGCCAAATCTGCTGGCTTCAACCAATGCAGCCCAGTGGTGTTGGGCACTAGCTCTGAGCCAGGTGTGTGTATTACTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS-3UTR CAA 90 bp GACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGAACACAGTGACCAGGTaGGACACAGATGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DTWPGRRWLNQFSESTTWNTVTR*DTDASF
Trigger: GAAGCTGGCATCTGTGTCCAACCTGGTCACTGTGTT...CCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGTTGGTCAATGGCTGCTaGGAAGGCCTGCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWALVNGC*EGLHPG
Trigger: TCCTGGATGCAGGCCTTCCAAGCAGCCATTGACCAA...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTACTCGGTTGGGCCTGTaGTCGTCGTATTTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSTRLGL*SSYFSS
Trigger: CGAACTGAAATACGACGACAACAGGCCCAACCGAGT...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp ATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGTGTAGTGAGCCATGTTaGTGCACTCCAGCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: MDPYFLIPDRDTWPGRRWCSEPC*CTPAWE
Trigger: TTCCCAGGCTGGAGTGCACAAACATGGCTCACTACA...CCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS TCA 90 bp CCAGTAGGCAGAGTTAACAACAGAATCCATCAGGTGCCAGGGTGCTaGGGGCTTGCAGAGAAGAGAGGACAGTTAGCCGAAGCGGGTAAA +
Preference number: 5 (lower is better)
Translates to: PVGRVNNRIHQVPGC*GLAEKRGQLAEAGK
Trigger: TTTACCCGCTTCGGCTAACTGTCCTCTCTTCTCTGCAAGCCCTCAGCACCCTGGCACCTGATGGATTCTGTTGTTAACTCTGCCTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 90 bp CCTGTCCAGCTAGACTCCTCCTGTCCTCTGGAGGTCATCAAAGACTaGGGTTGCAAAGGGCTTCTCTGTTTGCAGAGTAAACAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PVQLDSSCPLEVIKD*GCKGLLCLQSKQRG
Trigger: CCCCCTCTGTTTACTCTGCAAACAGAGAAGCCCTTTGCAACCTCAGTCTTTGATGACCTCCAGAGGACAGGAGGAGTCTAGCTGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 90 bp CCCTTCAGTCTCTCCTGGCAGATGACACTCCCTCTCCCTCTGAGCTaGTATAGGCAGAACAGAGAGGGAACAAGCTCTATTTGGGTTGGT +
Preference number: 5 (lower is better)
Translates to: PFSLSWQMTLPLPLS*YRQNREGTSSIWVG
Trigger: ACCAACCCAAATAGAGCTTGTTCCCTCTCTGTTCTGCCTATACCAGCTCAGAGGGAGAGGGAGTGTCATCTGCCAGGAGAGACTGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS-3UTR CAA 90 bp CAGGAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTCGCTCCATGGGGTCGTaGCGGCGGAAGGAGATCTTG +
Preference number: 5 (lower is better)
Translates to: QEIQMKNHTMVTTSPGLPRSMGS*RRKEIL
Trigger: CAAGATCTCCTTCCGCCGCAACGACCCCATGGAGCG...AGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CAA 90 bp CCTGGGCGCAGATGGCTGAATCAATTCTCTGAAAGCACCACTTGGGGCAGTGGGATTCCGCTTCTCGATTaGGTCAATGGCTGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: PGRRWLNQFSESTTWGSGIPLLD*VNGCLE
Trigger: TTCCAAGCAGCCATTGACCAAATCGAGAAGCGGAAT...CCCACTGCCCCAAGTGGTGCTTTCAGAGAATTGATTCAGCCATCTGCGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTCGGCGCGTCAGAGCGTaGAAGGGCTCCTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSRRVRA*KGSWQR
Trigger: GCGCTGCCAGGAGCCCTTCAACGCTCTGACGCGCCG...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS TCA 90 bp GACTTGCCCAAGGACACACAGTTAGTAAGCAGACGTGCTGGGATGTaGCTCCAGGGAATTTGGGTGCACAGTATCTGCATGCCAACCCTT +
Preference number: 5 (lower is better)
Translates to: DLPKDTQLVSRRAGM*LQGIWVHSICMPTL
Trigger: AAGGGTTGGCATGCAGATACTGTGCACCCAAATTCCCTGGAGTCACATCCCAGCACGTCTGCTTACTAACTGTGTGTCCTTGGGCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS GCA 90 bp AGCCTAGAGATGCAGGGACTTGGCCAAAGGCTGGCAGCTGATGAATaGCATAAACAGGCCCAAACTGTGGAGGTCTTGGACTTCATCAGA +
Preference number: 5 (lower is better)
Translates to: SLEMQGLGQRLAADE*HKQAQTVEVLDFIR
Trigger: TCTGATGAAGTCCAAGACCTCCACAGTTTGGGCCTGTTTATGGCATTCATCAGCTGCCAGCCTTTGGCCAAGTCCCTGCATCTCTAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS-3UTR CAA 90 bp GAGATACAAATGAAAAACCATACTATGGTGACCACCAGTCCGGGGTTACCTGGGTCAGTGATGGCTGCATaGGAGTGCTGGGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: EIQMKNHTMVTTSPGLPGSVMAA*ECWAAE
Trigger: CTCAGCTGCCCAGCACTCCAATGCAGCCATCACTGA...CCCAGGTAACCCCGGACTGGTGGTCACCATAGTATGGTTTTTCATTTGTATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS-3UTR CAA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGACAGGGGCTCAACCATaGGTTGTGGTAGTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWATGAQP*VVVVCS
Trigger: AGAGCAAACTACCACAACCAATGGTTGAGCCCCTGT...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CAA 90 bp GAAAGGAATGGACCCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGTATCATGACTGGCACTaGACAGGGGCTCAACCATTG +
Preference number: 5 (lower is better)
Translates to: ERNGPIFSNPRSGHVAWAYHDWH*TGAQPL
Trigger: CAATGGTTGAGCCCCTGTCAAGTGCCAGTCATGATA...CGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGGGTCCATTCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS TCA 90 bp AGAGAGGGAACAAGCTCTATTTGGGTTGGTGGCTCCAGCAAGGGATaGAAAAGCCTTCATTTACCTCCTGCTCCTGGATGTCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: REGTSSIWVGGSSKG*KSLHLPPAPGCLPQ
Trigger: CTGAGGGAGACATCCAGGAGCAGGAGGTAAATGAAGGCTTTTTCATCCCTTGCTGGAGCCACCAACCCAAATAGAGCTTGTTCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS GCA 90 bp GTGCTGGGATGTGACTCCAGGGAATTTGGGTGCACAGTATCTGCATaGCAACCCTTGAACTCTGCAGATGAGAAAACTGCAAGCCACAGA +
Preference number: 5 (lower is better)
Translates to: VLGCDSREFGCTVSA*QPLNSADEKTASHR
Trigger: TCTGTGGCTTGCAGTTTTCTCATCTGCAGAGTTCAAGGGTTGGCATGCAGATACTGTGCACCCAAATTCCCTGGAGTCACATCCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS-3UTR CAA 90 bp CCATATTTTCTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATGGCAAACTGAGACACTaGGTTGTCCCCTTTCTAGAA +
Preference number: 5 (lower is better)
Translates to: PYFLIPDRDTWPGRRWLNGKLRH*VVPFLE
Trigger: TTCTAGAAAGGGGACAACCAAGTGTCTCAGTTTGCC...ATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAGAAAATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274963.13
ENST00000373535.6
CDS TCA 90 bp AGACTCCAGGATACCATATCCTCATTGGGCCTCAGTTTCCCTATCTaGCATATGGAGCTAGCAATACTCACCCCTGACCCCCTTCACACA +
Preference number: 5 (lower is better)
Translates to: RLQDTISSLGLSFPI*HMELAILTPDPLHT
Trigger: TGTGTGAAGGGGGTCAGGGGTGAGTATTGCTAGCTCCATATGTCAGATAGGGAAACTGAGGCCCAATGAGGATATGGTATCCTGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS TCA 90 bp GTGACTCCAGGGAATTTGGGTGCACAGTATCTGCATGCCAACCCTTaGACTCTGCAGATGAGAAAACTGCAAGCCACAGAAGAGATCAGA +
Preference number: 5 (lower is better)
Translates to: VTPGNLGAQYLHANP*TLQMRKLQATEEIR
Trigger: TCTGATCTCTTCTGTGGCTTGCAGTTTTCTCATCTGCAGAGTTCAAGGGTTGGCATGCAGATACTGTGCACCCAAATTCCCTGGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS TCA 90 bp ATTTGGGTGCACAGTATCTGCATGCCAACCCTTGAACTCTGCAGATaGGAAAACTGCAAGCCACAGAAGAGATCAGACTGGGCTTTAGTC +
Preference number: 5 (lower is better)
Translates to: IWVHSICMPTLELCR*ENCKPQKRSDWALV
Trigger: GACTAAAGCCCAGTCTGATCTCTTCTGTGGCTTGCAGTTTTCTCATCTGCAGAGTTCAAGGGTTGGCATGCAGATACTGTGCACCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS TCA 90 bp AAAACTATGAAAGGTAAGATCGTTGTGAGGTTGTGGGCATTGAGATaGCAGATGAAGATACCGTGTAGGCCAGCAAGGGCCAGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: KTMKGKIVVRLWALR*QMKIPCRPARASWC
Trigger: ACACCAGCTGGCCCTTGCTGGCCTACACGGTATCTTCATCTGTCATCTCAATGCCCACAACCTCACAACGATCTTACCTTTCATAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS-3UTR CAA 90 bp TTGCTCTCTTTATTCTTCATCCCAGGTAACCCAGGCTATATATTAGACTCCAGTTGGAGGCAGACTCGGTaGGGCCTGTTGTCGTCGTAT +
Preference number: 5 (lower is better)
Translates to: LLSLFFIPGNPGYILDSSWRQTR*GLLSSY
Trigger: ATACGACGACAACAGGCCCAACCGAGTCTGCCTCCA...ACTGGAGTCTAATATATAGCCTGGGTTACCTGGGATGAAGAATAAAGAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CAA 90 bp CTAATCCCAGATCGGGACACGTGGCCTGGGCGCAGATGGCTGAATCAATTCTCTATTGGTTGTGGTAGTTaGCTCTCTTTATTCTTCATC +
Preference number: 5 (lower is better)
Translates to: LIPDRDTWPGRRWLNQFSIGCGS*LSLFFI
Trigger: GATGAAGAATAAAGAGAGCAAACTACCACAACCAAT...AGAGAATTGATTCAGCCATCTGCGCCCAGGCCACGTGTCCCGATCTGGGATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS-3UTR CAA 90 bp GCACTTGACAGGGGCTCAACCATTGGTTGTGGTAGTTTGCTCTCTTTATTCTTCGCTCGCTCAAAGTTCTaGACATACTCACTGTACATC +
Preference number: 5 (lower is better)
Translates to: ALDRGSTIGCGSLLSLFFARSKF*TYSLYI
Trigger: GATGTACAGTGAGTATGTCAAGAACTTTGAGCGAGC...GAAGAATAAAGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274963.13
CDS TCA 90 bp CCCTGGGGCTTCTACAGCAAGCTGACTGACCTGATCGAGACCTTATaGTACGTTAGTTACCATTATTCCTATTGTATAAGTGAGGAAACT +
Preference number: 5 (lower is better)
Translates to: PWGFYSKLTDLIETL*YVSYHYSYCISEET
Trigger: AGTTTCCTCACTTATACAATAGGAATAATGGTAACTAACGTATCATAAGGTCTCGATCAGGTCAGTCAGCTTGCTGTAGAAGCCCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS GCA 90 bp CAAGTCCCACAGTTTAGCTTTAAGATTCAGGCAGACTTTGTATTCTaGGCCATCATGGAGTCAAGTGTGTTTTCACCTAAAAATGATAGG +
Preference number: 5 (lower is better)
Translates to: QVPQFSFKIQADFVF*AIMESSVFSPKNDR
Trigger: CCTATCATTTTTAGGTGAAAACACACTTGACTCCATGATGGCGCAGAATACAAAGTCTGCCTGAATCTTAAAGCTAAACTGTGGGACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 90 bp AGTTTAGCTTTAAGATTCAGGCAGACTTTGTATTCTGCGCCATCATaGAGTCAAGTGTGTTTTCACCTAAAAATGATAGGCTGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: SLALRFRQTLYSAPS*SQVCFHLKMIGWLF
Trigger: AAACAACCAGCCTATCATTTTTAGGTGAAAACACACTTGACTCCATGATGGCGCAGAATACAAAGTCTGCCTGAATCTTAAAGCTAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 72 bp GGTCCTGGGGACTCGGGAGGCCTGCACTCAGGGCGGTaGTGCACGTCCTCTAGCCTCTGGCCTCTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: GPGDSGGLHSGR*CTSSSLWPLGA
Trigger: AGCACCCAGAGGCCAGAGGCTAGAGGACGTGCATCACCGCCCTGAGTGCAGGCCTCCCGAGTCCCCAGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS CCA 72 bp CACGGCCTCCCCGACATTCGTCTTCTCCCGTGGTCCTaGGGACTCGGGAGGCCTGCACTCAGGGCGGTGATG +
Preference number: 6 (lower is better)
Translates to: HGLPDIRLLPWS*GLGRPALRAVM
Trigger: CATCACCGCCCTGAGTGCAGGCCTCCCGAGTCCCCAGGACCACGGGAGAAGACGAATGTCGGGGAGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS CCA 72 bp CAGGCTGCCCGAAGCCTCGCTGCTCTTGGGGAGGGATaGGGGAGCAACACGGAGAGGGTGAGAGAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: QAARSLAALGEG*GSNTERVREGR
Trigger: CCTCCCTTCTCTCACCCTCTCCGTGTTGCTCCCCCATCCCTCCCCAAGAGCAGCGAGGCTTCGGGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464083.5
ENST00000470273.5
ENST00000493635.1
CDS TCA 72 bp GGCTCCTCAGCCCTCAGGCACCTGCGTCCCCGATCCTaGGAGGGTCACAGGCTGGCAAGATTTCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GSSALRHLRPRS*EGHRLARFPPG
Trigger: GCCTGGAGGAAATCTTGCCAGCCTGTGACCCTCTCAGGATCGGGGACGCAGGTGCCTGAGGGCTGAGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497659.5
CDS GCA 72 bp ACCCACTGCGGTGCCCGGAGGCCCAGCTCCTCAGACTaGAGCTGTGGGTTAAGGGGAGTTGGGCAGGAATGG +
Preference number: 6 (lower is better)
Translates to: THCGARRPSSSD*SCGLRGVGQEW
Trigger: CCATTCCTGCCCAACTCCCCTTAACCCACAGCTGCAGTCTGAGGAGCTGGGCCTCCGGGCACCGCAGTGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CCA 72 bp ACCTTCATCCCGGCCACATCGATGCGGGTCCTCACCTaGAACTGGGCGCCCACCTGGATCACCCTGGGCACA +
Preference number: 6 (lower is better)
Translates to: TFIPATSMRVLT*NWAPTWITLGT
Trigger: TGTGCCCAGGGTGATCCAGGTGGGCGCCCAGTTCCAGGTGAGGACCCGCATCGATGTGGCCGGGATGAAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274963.13
ENST00000464083.5
ENST00000470273.5
ENST00000494343.5
CDS CCA 72 bp GCCCTGAGTCGGGGGATGCGCTGGGAAGGCTTCCCCTaGTCCCTTCAGTCTCTCCTGGCAGATGACACTCCC +
Preference number: 6 (lower is better)
Translates to: ALSRGMRWEGFP*SLQSLLADDTP
Trigger: GGGAGTGTCATCTGCCAGGAGAGACTGAAGGGACCAGGGGAAGCCTTCCCAGCGCATCCCCCGACTCAGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS GCA 72 bp CCGTGTAGGCCAGCAAGGGCCAGCTGGTGTGTTCTCTaGTATACAGGGGCCAGCCTGGGCACCACAGGCAGA +
Preference number: 6 (lower is better)
Translates to: PCRPARASWCVL*YTGASLGTTGR
Trigger: TCTGCCTGTGGTGCCCAGGCTGGCCCCTGTATAGCAGAGAACACACCAGCTGGCCCTTGCTGGCCTACACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS TCA 72 bp TCTACCTCAGCCCTCAGGCACCTGCGTCCCCGATCCTaGGAGGGTCACAGGCTGGCAAGATTTCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: STSALRHLRPRS*EGHRLARFPPG
Trigger: GCCTGGAGGAAATCTTGCCAGCCTGTGACCCTCTCAGGATCGGGGACGCAGGTGCCTGAGGGCTGAGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS GCA 72 bp GAGGTCCTTGAAGTTCAACAAAGGGCCCTCAGGACCTaGCATGACAGCCCCCAGGAGCAGCCCTGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: EVLEVQQRALRT*HDSPQEQPCLC
Trigger: GCACAGGCAGGGCTGCTCCTGGGGGCTGTCATGGCAGGTCCTGAGGGCCCTTTGTTGAACTTCAAGGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS GCA 72 bp GAAAGCTTCGAGGGAGGAATAGAGGCAGAGCGGGGATaGTCCCCCATGCTGGTGAGGCCCAACTGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: ESFEGGIEAERG*SPMLVRPNCLE
Trigger: CTCCAGGCAGTTGGGCCTCACCAGCATGGGGGAGCATCCCCGCTCTGCCTCTATTCCTCCCTCGAAGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CAA 90 bp TTAGACTGTGAGCCTCCTGAGGCCAAAGGCTGTTCTGGTCCCAGGTaGGCCTCATCCACAAGGCCCGGCACAGTGTTGGGCCCACAGCAG +
Preference number: 6 (lower is better)
Translates to: LDCEPPEAKGCSGPR*ASSTRPGTVLGPQQ
Trigger: CTGCTGTGGGCCCAACACTGTGCCGGGCCTTGTGGATGAGGCCAACCTGGGACCAGAACAGCCTTTGGCCTCAGGAGGCTCACAGTCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470273.5
ENST00000494343.5
CDS CCA 72 bp CCAGGTTGGCCTCATCCACAAGGCCCGGCACAGTGTTaGGCCCACAGCAGGTGTTCAGTAACTGCTCAGTGC +
Preference number: 6 (lower is better)
Translates to: PGWPHPQGPAQC*AHSRCSVTAQC
Trigger: GCACTGAGCAGTTACTGAACACCTGCTGTGGGCCCAACACTGTGCCGGGCCTTGTGGATGAGGCCAACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470273.5
ENST00000494343.5
CDS CCA 72 bp CCTCACCTGGATGCGAGTGAGAACCTCCTGGAAGAGTaGAGACTTGTCGGTCCAGGTGGCCAGCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PHLDASENLLEE*RLVGPGGQQLS
Trigger: GCTGAGCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCAGGTGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464083.5
ENST00000470273.5
ENST00000493635.1
CDS CCA 72 bp GACTGCAGCTGTGGGTTAAGGGGAGTTGGGCAGGAATaGGCCCTTGGTGACCTTCTTCCGCCCATCCTCCCA +
Preference number: 6 (lower is better)
Translates to: DCSCGLRGVGQE*ALGDLLPPILP
Trigger: TGGGAGGATGGGCGGAAGAAGGTCACCAAGGGCCCATTCCTGCCCAACTCCCCTTAACCCACAGCTGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CAA 72 bp TCCCTCCGAGTGAGGGCTGCTGTGAACCCAAGGGGCTaGCCCCAGACGGGCCACTGGCATCTGATTCACTTT +
Preference number: 6 (lower is better)
Translates to: SLRVRAAVNPRG*PQTGHWHLIHF
Trigger: AAAGTGAATCAGATGCCAGTGGCCCGTCTGGGGCAAGCCCCTTGGGTTCACAGCAGCCCTCACTCGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CAA 90 bp AGCCTCACCTGGATGCGAGTGAGAACCTCCTGGAAGAGTGGAGACTaGTCGGTCCAGGTGGCCAGCAGCTCAGCCGCTCGCTCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: SLTWMRVRTSWKSGD*SVQVASSSAARSKF
Trigger: GAACTTTGAGCGAGCGGCTGAGCTGCTGGCCACCTGGACCGACAAGTCTCCACTCTTCCAGGAGGTTCTCACTCGCATCCAGGTGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464083.5
ENST00000470273.5
ENST00000493635.1
CDS CAA 90 bp CAGAGAGGAACACTGGGTGCCGCAAGGTGTGACTGCGAGGAAGACTaGGCTTTATGGGGAGCCCAGATGTGGGCGTGGAGATGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: QRGTLGAARCDCEED*ALWGAQMWAWRWRA
Trigger: TGCCCTCCATCTCCACGCCCACATCTGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGTTCCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 72 bp CACTGGGTGCCGCAAGGTGTGACTGCGAGGAAGACTTaGCTTTATGGGGAGCCCAGATGTGGGCGTGGAGAT +
Preference number: 6 (lower is better)
Translates to: HWVPQGVTARKT*LYGEPRCGRGD
Trigger: ATCTCCACGCCCACATCTGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 72 bp GCTGGGAAGGCTTCCCCTGGTCCCTTCAGTCTCTCCTaGCAGATGACACTCCCTCTCCCTCTGAGCTGGTAT +
Preference number: 6 (lower is better)
Translates to: AGKASPGPFSLS*QMTLPLPLSWY
Trigger: ATACCAGCTCAGAGGGAGAGGGAGTGTCATCTGCCAGGAGAGACTGAAGGGACCAGGGGAAGCCTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CCA 72 bp CAGATGAAGATACCGTGTAGGCCAGCAAGGGCCAGCTaGTGTGTTCTCTGCTATACAGGGGCCAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: QMKIPCRPARAS*CVLCYTGASLG
Trigger: GCCCAGGCTGGCCCCTGTATAGCAGAGAACACACCAGCTGGCCCTTGCTGGCCTACACGGTATCTTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS CAA 72 bp ACACTGGGTGCCGCAAGGTGTGACTGCGAGGAAGACTaGGCTTTATGGGGAGCCCAGATGTGGGCGTGGAGA +
Preference number: 6 (lower is better)
Translates to: TLGAARCDCEED*ALWGAQMWAWR
Trigger: TCTCCACGCCCACATCTGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CAA 72 bp TGGGGCCCTGTGCCCACCTGCTGTAGCAGGGATTCTTaGTGTTGGGCTTCCCTGGGGCTTCTACAGCAAGCT +
Preference number: 6 (lower is better)
Translates to: WGPVPTCCSRDS*CWASLGLLQQA
Trigger: AGCTTGCTGTAGAAGCCCCAGGGAAGCCCAACACAAAGAATCCCTGCTACAGCAGGTGGGCACAGGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CAA 90 bp AGGGTCACAGGCTGGCAAGATTTCCTCCAGGCTTCGCTGGACAGCTaGTTCTTCAGGGAGTTCAGGTACCTCCTGCTGACTGTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: RVTGWQDFLQASLDS*FFREFRYLLLTVLG
Trigger: GCCCAGGACAGTCAGCAGGAGGTACCTGAACTCCCTGAAGAACAAGCTGTCCAGCGAAGCCTGGAGGAAATCTTGCCAGCCTGTGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS TCA 72 bp GCCATCGAGGAAGAGGACAGAAGAACTGGCTGCCTCTaGGGGCAAAGCAGTGGTGACCTAGAGTCAGGGCAC +
Preference number: 6 (lower is better)
Translates to: AIEEEDRRTGCL*GQSSGDLESGH
Trigger: GTGCCCTGACTCTAGGTCACCACTGCTTTGCCCTCAGAGGCAGCCAGTTCTTCTGTCCTCTTCCTCGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS GCA 72 bp CTCCAGCAAGGGATGAAAAAGCCTTCATTTACCTCCTaGTCCTGGATGTCTCCCTCAGGCCCCTGGGCCGCA +
Preference number: 6 (lower is better)
Translates to: LQQGMKKPSFTS*SWMSPSGPWAA
Trigger: TGCGGCCCAGGGGCCTGAGGGAGACATCCAGGAGCAGGAGGTAAATGAAGGCTTTTTCATCCCTTGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CCA 72 bp AGTACCCTCCTCAAGAAGCTGGTAGCTCACCCGCACTaGATGCCCTGCCTGAGTTATGGAGGAGGGGGAAAG +
Preference number: 6 (lower is better)
Translates to: STLLKKLVAHPH*MPCLSYGGGGK
Trigger: CTTTCCCCCTCCTCCATAACTCAGGCAGGGCATCCAGTGCGGGTGAGCTACCAGCTTCTTGAGGAGGGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 72 bp GGTAAAAGGGGCCTGGGAAGACTCAGAGAGGAACACTaGGTGCCGCAAGGTGTGACTGCGAGGAAGACTTGG +
Preference number: 6 (lower is better)
Translates to: GKRGLGRLREEH*VPQGVTARKTW
Trigger: CCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGTTCCTCTCTGAGTCTTCCCAGGCCCCTTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 72 bp GGGAGACAGAAACTGGCACCCGAACCACCGAAAGGATaGCTCACTGGCTCAGCAGGCACGAAGATCTGCACA +
Preference number: 6 (lower is better)
Translates to: GRQKLAPEPPKG*LTGSAGTKICT
Trigger: TGTGCAGATCTTCGTGCCTGCTGAGCCAGTGAGTCATCCTTTCGGTGGTTCGGGTGCCAGTTTCTGTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 72 bp GAAGACTCAGAGAGGAACACTGGGTGCCGCAAGGTGTaGCTGCGAGGAAGACTTGGCTTTATGGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: EDSERNTGCRKV*LRGRLGFMGSP
Trigger: TGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGTTCCTCTCTGAGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 72 bp CCCTATCTGACATATGGAGCTAGCAATACTCACCCCTaGCCCCCTTCACACACACGCTGTGGGAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PYLTYGASNTHP*PPSHTRCGKAR
Trigger: CCTGGCCTTCCCACAGCGTGTGTGTGAAGGGGGTCAGGGGTGAGTATTGCTAGCTCCATATGTCAGATAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS GCA 72 bp ACTCAGAGAGGAACACTGGGTGCCGCAAGGTGTGACTaGGAGGAAGACTTGGCTTTATGGGGAGCCCAGATG +
Preference number: 6 (lower is better)
Translates to: TQRGTLGAARCD*EEDLALWGAQM
Trigger: CATCTGGGCTCCCCATAAAGCCAAGTCTTCCTCGCAGTCACACCTTGCGGCACCCAGTGTTCCTCTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 72 bp GGGTCACAGGCTGGCAAGATTTCCTCCAGGCTTCGCTaGACAGCTTGTTCTTCAGGGAGTTCAGGTACCTCC +
Preference number: 6 (lower is better)
Translates to: GSQAGKISSRLR*TACSSGSSGTS
Trigger: GGAGGTACCTGAACTCCCTGAAGAACAAGCTGTCCAGCGAAGCCTGGAGGAAATCTTGCCAGCCTGTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS CCA 72 bp GGCTCAGAGCTAGTGCCCAACACCACTGGGCTGCATTaGTTGAAGCCAGCAGATTTGGCCAAGATGGGGACA +
Preference number: 6 (lower is better)
Translates to: GSELVPNTTGLH*LKPADLAKMGT
Trigger: TGTCCCCATCTTGGCCAAATCTGCTGGCTTCAACCAATGCAGCCCAGTGGTGTTGGGCACTAGCTCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 72 bp GAAACTGGCACCCGAACCACCGAAAGGATGACTCACTaGCTCAGCAGGCACGAAGATCTGCACAGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: ETGTRTTERMTH*LSRHEDLHRQE
Trigger: CTCTTGCCTGTGCAGATCTTCGTGCCTGCTGAGCCAGTGAGTCATCCTTTCGGTGGTTCGGGTGCCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CCA 72 bp GCTATACAGGGGCCAGCCTGGGCACCACAGGCAGAATaGGGAGTACTGCTAACAAGACCTCCTGATTCTACC +
Preference number: 6 (lower is better)
Translates to: AIQGPAWAPQAE*GVLLTRPPDST
Trigger: GGTAGAATCAGGAGGTCTTGTTAGCAGTACTCCCCATTCTGCCTGTGGTGCCCAGGCTGGCCCCTGTATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS CAA 90 bp TGTTCTGGTCCCAGGTTGGCCTCATCCACAAGGCCCGGCACAGTGTaGGGCCCACAGCAGGTGTTCAGTAACTGCTCAGTGCTTCATTAT +
Preference number: 6 (lower is better)
Translates to: CSGPRLASSTRPGTV*GPQQVFSNCSVLHY
Trigger: ATAATGAAGCACTGAGCAGTTACTGAACACCTGCTGTGGGCCCAACACTGTGCCGGGCCTTGTGGATGAGGCCAACCTGGGACCAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470273.5
ENST00000494343.5
CDS CAA 72 bp GGCTGGCAAGATTTCCTCCAGGCTTCGCTGGACAGCTaGTTCTTCAGGGAGTTCAGGTACCTCCTGCTGACT +
Preference number: 6 (lower is better)
Translates to: GWQDFLQASLDS*FFREFRYLLLT
Trigger: AGTCAGCAGGAGGTACCTGAACTCCCTGAAGAACAAGCTGTCCAGCGAAGCCTGGAGGAAATCTTGCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS CAA 72 bp CAAGACAGCTGTGCAGACAGGCTCTCAAAGGAAGTTTaGCTAAAGGGGAATGCTCAGGCCCTGAGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: QDSCADRLSKEV*LKGNAQALSRG
Trigger: CCCCCGACTCAGGGCCTGAGCATTCCCCTTTAGCAAAACTTCCTTTGAGAGCCTGTCTGCACAGCTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS TCA 72 bp GTGCTGCTTCTGGGGTCCTGCTATTCTCAAACACAGTaGCCAGGTTGGACACAGATGCCAGCTTCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: VLLLGSCYSQTQ*PGWTQMPASPH
Trigger: GTGAGGAGAAGCTGGCATCTGTGTCCAACCTGGTCACTGTGTTTGAGAATAGCAGGACCCCAGAAGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS GCA 72 bp GCTATTCTCAAACACAGTGACCAGGTTGGACACAGATaGCAGCTTCTCCTCACTTGCCCCCTTCATCCTGCC +
Preference number: 6 (lower is better)
Translates to: AILKHSDQVGHR*QLLLTCPLHPA
Trigger: GGCAGGATGAAGGGGGCAAGTGAGGAGAAGCTGGCATCTGTGTCCAACCTGGTCACTGTGTTTGAGAATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000274963.13
ENST00000373535.6
ENST00000459781.5
ENST00000464083.5
ENST00000487975.5
ENST00000489356.1
ENST00000497659.5
CDS GCA 72 bp GCAGACGTGCTGGGATGTGACTCCAGGGAATTTGGGTaGACAGTATCTGCATGCCAACCCTTGAACTCTGCA +
Preference number: 6 (lower is better)
Translates to: ADVLGCDSREFG*TVSACQPLNSA
Trigger: TGCAGAGTTCAAGGGTTGGCATGCAGATACTGTGCACCCAAATTCCCTGGAGTCACATCCCAGCACGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS GCA 72 bp ATGCAGGGACTTGGCCAAAGGCTGGCAGCTGATGAATaGCATAAACAGGCCCAAACTGTGGAGGTCTTGGAC +
Preference number: 6 (lower is better)
Translates to: MQGLGQRLAADE*HKQAQTVEVLD
Trigger: GTCCAAGACCTCCACAGTTTGGGCCTGTTTATGGCATTCATCAGCTGCCAGCCTTTGGCCAAGTCCCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS TCA 72 bp AGCAGTCACTCAGCAAGCCAGAGTTCAGCTCAAATCTaGACTCAAACCACAGATATCCTCCCCAGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: SSHSASQSSAQI*TQTTDILPSPH
Trigger: GTGGGGGCTGGGGAGGATATCTGTGGTTTGAGTTCAGATTTGAGCTGAACTCTGGCTTGCTGAGTGACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS CAA 90 bp CTGGCAGCTGATGAATGCCATAAACAGGCCCAAACTGTGGAGGTCTaGGACTTCATCAGACTAGAGCTCCCTGCGGTGATGAATAACCCT +
Preference number: 6 (lower is better)
Translates to: LAADECHKQAQTVEV*DFIRLELPAVMNNP
Trigger: AGGGTTATTCATCACCGCAGGGAGCTCTAGTCTGATGAAGTCCAAGACCTCCACAGTTTGGGCCTGTTTATGGCATTCATCAGCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS CCA 72 bp CTTGCCCAAGGACACACAGTTAGTAAGCAGACGTGCTaGGATGTGACTCCAGGGAATTTGGGTGCACAGTAT +
Preference number: 6 (lower is better)
Translates to: LAQGHTVSKQTC*DVTPGNLGAQY
Trigger: ATACTGTGCACCCAAATTCCCTGGAGTCACATCCCAGCACGTCTGCTTACTAACTGTGTGTCCTTGGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS CAA 72 bp GATGAATGCCATAAACAGGCCCAAACTGTGGAGGTCTaGGACTTCATCAGACTAGAGCTCCCTGCGGTGATG +
Preference number: 6 (lower is better)
Translates to: DECHKQAQTVEV*DFIRLELPAVM
Trigger: CATCACCGCAGGGAGCTCTAGTCTGATGAAGTCCAAGACCTCCACAGTTTGGGCCTGTTTATGGCATTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS CAA 90 bp GGCAGGACAGTTCACACTCAGACCTCTATTTCTAGGTTGAGATTGTaGTCTCCTCCAGTGGGTAAACTGAGGCCCCACCTGAGAAGAGTA +
Preference number: 6 (lower is better)
Translates to: GRTVHTQTSISRLRL*SPPVGKLRPHLRRV
Trigger: TACTCTTCTCAGGTGGGGCCTCAGTTTACCCACTGGAGGAGACAACAATCTCAACCTAGAAATAGAGGTCTGAGTGTGAACTGTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS CAA 90 bp AAGGGCAGGACAGTTCACACTCAGACCTCTATTTCTAGGTTGAGATaGTTGTCTCCTCCAGTGGGTAAACTGAGGCCCCACCTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: KGRTVHTQTSISRLR*LSPPVGKLRPHLRR
Trigger: TCTTCTCAGGTGGGGCCTCAGTTTACCCACTGGAGGAGACAACAATCTCAACCTAGAAATAGAGGTCTGAGTGTGAACTGTCCTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS TCA 72 bp GGGCTTCTCTGTTTGCAGAGTAAACAGAGGGGGTTGTaGTGTCAACAGAGAACAGCTCAAGTACAGGAGTGC +
Preference number: 6 (lower is better)
Translates to: GLLCLQSKQRGL*CQQRTAQVQEC
Trigger: GCACTCCTGTACTTGAGCTGTTCTCTGTTGACATCACAACCCCCTCTGTTTACTCTGCAAACAGAGAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 72 bp AAAGGTAAGATCGTTGTGAGGTTGTGGGCATTGAGATaGCAGATGAAGATACCGTGTAGGCCAGCAAGGGCC +
Preference number: 6 (lower is better)
Translates to: KGKIVVRLWALR*QMKIPCRPARA
Trigger: GGCCCTTGCTGGCCTACACGGTATCTTCATCTGTCATCTCAATGCCCACAACCTCACAACGATCTTACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487975.5
CDS TCA 72 bp CTAGACTCCTCCTGTCCTCTGGAGGTCATCAAAGACTaGGGTTGCAAAGGGCTTCTCTGTTTGCAGAGTAAA +
Preference number: 6 (lower is better)
Translates to: LDSSCPLEVIKD*GCKGLLCLQSK
Trigger: TTTACTCTGCAAACAGAGAAGCCCTTTGCAACCTCAGTCTTTGATGACCTCCAGAGGACAGGAGGAGTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 72 bp ACAAGCTCTATTTGGGTTGGTGGCTCCAGCAAGGGATaGAAAAGCCTTCATTTACCTCCTGCTCCTGGATGT +
Preference number: 6 (lower is better)
Translates to: TSSIWVGGSSKG*KSLHLPPAPGC
Trigger: ACATCCAGGAGCAGGAGGTAAATGAAGGCTTTTTCATCCCTTGCTGGAGCCACCAACCCAAATAGAGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487920.1
CDS TCA 72 bp CACAGTATCTGCATGCCAACCCTTGAACTCTGCAGATaGGAAAACTGCAAGCCACAGAAGAGATCAGACTGG +
Preference number: 6 (lower is better)
Translates to: HSICMPTLELCR*ENCKPQKRSDW
Trigger: CCAGTCTGATCTCTTCTGTGGCTTGCAGTTTTCTCATCTGCAGAGTTCAAGGGTTGGCATGCAGATACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS GCA 72 bp TGTGACTCCAGGGAATTTGGGTGCACAGTATCTGCATaGCAACCCTTGAACTCTGCAGATGAGAAAACTGCA +
Preference number: 6 (lower is better)
Translates to: CDSREFGCTVSA*QPLNSADEKTA
Trigger: TGCAGTTTTCTCATCTGCAGAGTTCAAGGGTTGGCATGCAGATACTGTGCACCCAAATTCCCTGGAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS CAA 72 bp GGCAGGACAGTTCACACTCAGACCTCTATTTCTAGGTaGAGATTGTTGTCTCCTCCAGTGGGTAAACTGAGG +
Preference number: 6 (lower is better)
Translates to: GRTVHTQTSISR*RLLSPPVGKLR
Trigger: CCTCAGTTTACCCACTGGAGGAGACAACAATCTCAACCTAGAAATAGAGGTCTGAGTGTGAACTGTCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS CAA 72 bp CAAATGAGGAAACTGGCACAAAGAGACTCAAGTGACTaGCCCAAGGACACACAGTTAGTAAGCAGACGTGCT +
Preference number: 6 (lower is better)
Translates to: QMRKLAQRDSSD*PKDTQLVSRRA
Trigger: AGCACGTCTGCTTACTAACTGTGTGTCCTTGGGCAAGTCACTTGAGTCTCTTTGTGCCAGTTTCCTCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS TCA 72 bp GCCGCTACATTTTTGATAGGTTTGTTCAGCAGCGATTaGAAACCAGGACGCATTACTATAACCACTATCCCC +
Preference number: 6 (lower is better)
Translates to: AATFLIGLFSSD*KPGRITITTIP
Trigger: GGGGATAGTGGTTATAGTAATGCGTCCTGGTTTTCAATCGCTGCTGAACAAACCTATCAAAAATGTAGCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS CAA 72 bp AGCCGCTACATTTTTGATAGGTTTGTTCAGCAGCGATaGAAAACCAGGACGCATTACTATAACCACTATCCC +
Preference number: 6 (lower is better)
Translates to: SRYIFDRFVQQR*KTRTHYYNHYP
Trigger: GGGATAGTGGTTATAGTAATGCGTCCTGGTTTTCAATCGCTGCTGAACAAACCTATCAAAAATGTAGCGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS CAA 72 bp AAGTCCCACAGTTTAGCTTTAAGATTCAGGCAGACTTaGTATTCTGCGCCATCATGGAGTCAAGTGTGTTTT +
Preference number: 6 (lower is better)
Translates to: KSHSLALRFRQT*YSAPSWSQVCF
Trigger: AAAACACACTTGACTCCATGATGGCGCAGAATACAAAGTCTGCCTGAATCTTAAAGCTAAACTGTGGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CAA 72 bp GTTCACAAGATGGAGACTGTTCCAAGCTGTGTGGCCTaGAATAAGTTCCTTAAAACTGTGTTTCAACTTCCT +
Preference number: 6 (lower is better)
Translates to: VHKMETVPSCVA*NKFLKTVFQLP
Trigger: AGGAAGTTGAAACACAGTTTTAAGGAACTTATTCAAGGCCACACAGCTTGGAACAGTCTCCATCTTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489356.1
CDS CAA 90 bp GTGAGGCACTGCACCCAGCCAATACAATATTATTATCTAGATATGTaGCATCATCAAATTTCTCCCAATGGTCCCAAGAGCAACCTTGAT +
Preference number: 6 (lower is better)
Translates to: VRHCTQPIQYYYLDM*HHQISPNGPKSNLD
Trigger: ATCAAGGTTGCTCTTGGGACCATTGGGAGAAATTTGATGATGCAACATATCTAGATAATAATATTGTATTGGCTGGGTGCAGTGCCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CAA 90 bp GTGTCTTTCAAGTCCCACAGTTTAGCTTTAAGATTCAGGCAGACTTaGTATTCTGCGCCATCATGGAGTCAAGTGTGTTTTCACCTAAAA +
Preference number: 6 (lower is better)
Translates to: VSFKSHSLALRFRQT*YSAPSWSQVCFHLK
Trigger: TTTTAGGTGAAAACACACTTGACTCCATGATGGCGCAGAATACAAAGTCTGCCTGAATCTTAAAGCTAAACTGTGGGACTTGAAAGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS GCA 72 bp CAGTTTAGCTTTAAGATTCAGGCAGACTTTGTATTCTaGGCCATCATGGAGTCAAGTGTGTTTTCACCTAAA +
Preference number: 6 (lower is better)
Translates to: QFSFKIQADFVF*AIMESSVFSPK
Trigger: TTTAGGTGAAAACACACTTGACTCCATGATGGCGCAGAATACAAAGTCTGCCTGAATCTTAAAGCTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS CAA 72 bp ATCATCAAATTTCTCCCAATGGTCCCAAGAGCAACCTaGATAGCTTTATTTTACCCCAGAAAGAATCCAAGC +
Preference number: 6 (lower is better)
Translates to: IIKFLPMVPRAT*IALFYPRKNPS
Trigger: GCTTGGATTCTTTCTGGGGTAAAATAAAGCTATCAAGGTTGCTCTTGGGACCATTGGGAGAAATTTGATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493635.1
CDS TCA 72 bp TTCTACAGCAAGCTGACTGACCTGATCGAGACCTTATaGTACGTTAGTTACCATTATTCCTATTGTATAAGT +
Preference number: 6 (lower is better)
Translates to: FYSKLTDLIETL*YVSYHYSYCIS
Trigger: ACTTATACAATAGGAATAATGGTAACTAACGTATCATAAGGTCTCGATCAGGTCAGTCAGCTTGCTGTAGAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487920.1