RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000102302

Ensembl transcript IDs: ENST00000375135.4

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTaGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: LSCPLALPWVWTIKY*VALGPGRSCKPWER
Trigger: CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR TCA 90 bp GCATTCGGGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTaGGCTGGGAGGGAAGGGGCTAGAGCCCCCAATCAGACATGGGCA +
Preference number: 1 (lower is better)
Translates to: AFGIESARDGSSSID*AGREGARAPNQTWA
Trigger: TGCCCATGTCTGATTGGGGGCTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCCCGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR CAA 90 bp CCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTaGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: PLALPWVWTIKYWVA*GPGRSCKPWERQER
Trigger: CCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR TCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGTGTGAAGACACTGGCTaGGGAGGCAGGGCTGGGTCG +
Preference number: 2 (lower is better)
Translates to: KPWERQERSSCHPTWSCTCEDTG*GGRAGS
Trigger: CGACCCAGCCCTGCCTCCTCAGCCAGTGTCTTCACA...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR CCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTTGGGCAACTAGAGTGTaGGGTGGGGGCTCCCAGTTT +
Preference number: 2 (lower is better)
Translates to: VALGPGRSCKPWERQERSWATRV*GGGSQF
Trigger: AAACTGGGAGCCCCCACCCCACACTCTAGTTGCCCA...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR CCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTACCTCTGGTGCTTTGTaGGGAACTGGGTGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: VALGPGRSCKPWERQERSTSGAL*GTGWRQ
Trigger: CTGCCTCCACCCAGTTCCCCACAAAGCACCAGAGGT...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR TCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTTGGGAGTTCAAGTATTaGCTGAGCTGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VALGPGRSCKPWERQERSWEFKY*LSWEGR
Trigger: CCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCA...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR CCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTGGCTCCCACCCTCCCTaGGGACAGGGATTAATAAAA +
Preference number: 2 (lower is better)
Translates to: VALGPGRSCKPWERQERSGSHPP*GQGLIK
Trigger: TTTTATTAATCCCTGTCCCCAGGGAGGGTGGGAGCC...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR CCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCGGTCAGTGGCAGAGCTaGCACTTGAATCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSGQWQS*HLNPGL
Trigger: GAGACCTGGATTCAAGTGCCAGCTCTGCCACTGACC...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGAGCCCCCAATCAGACATaGGCAACTAGAGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGAPNQT*ATRVWG
Trigger: ACCCCACACTCTAGTTGCCCATGTCTGATTGGGGGC...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR CAA 90 bp ACCCAGCATTCGGGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATaGACTGAGCTGGGAGGGAAGGGGCTAGAGCCCCCAATCAGACAT +
Preference number: 2 (lower is better)
Translates to: TQHSGLKVPVMGVQV*TELGGKGLEPPIRH
Trigger: ATGTCTGATTGGGGGCTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCCCGAATGCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR GCA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCAGTCTCCTACCTCTGGTaGTTTGTGGGGAACTGGGTG +
Preference number: 2 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPVSYLW*FVGNWV
Trigger: CACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGAC...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR TCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCAGTTCAAGTATTGACTaGGCTGGGAGGGAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGSSSID*AGREGA
Trigger: AGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACT...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR CCA 72 bp TGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATaGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACG +
Preference number: 3 (lower is better)
Translates to: WVALGPGRSCKP*ERQERSSCHPT
Trigger: CGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR CCA 72 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTaGACGATAAAATACTGGGTAGCCTTGGGGCCGGGT +
Preference number: 3 (lower is better)
Translates to: VSLSCPLALPWV*TIKYWVALGPG
Trigger: ACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR CCA 72 bp CCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTaGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCA +
Preference number: 3 (lower is better)
Translates to: PLALPWVWTIKY*VALGPGRSCKP
Trigger: TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR CAA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTATGGGAGTTCAAGTATaGACTGAGCTGGGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: VALGPGRSCKPWERQERSMGVQV*TELGGK
Trigger: CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCAT...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR-3UTR CAA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCACCTACCTCTGGTGCTTaGTGGGGAACTGGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPPTSGA*WGTGWR
Trigger: CCTCCACCCAGTTCCCCACAAAGCACCAGAGGTAGG...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR GCA 72 bp AGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTaGCACCCCACGTGGAGTTGTACGTGTGAAGACACT +
Preference number: 3 (lower is better)
Translates to: SCKPWERQERSS*HPTWSCTCEDT
Trigger: AGTGTCTTCACACGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR TCA 72 bp ATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTaGGCTGGGAGGGAAGGGGCTAGAGCCCCCAATCAG +
Preference number: 3 (lower is better)
Translates to: IESARDGSSSID*AGREGARAPNQ
Trigger: CTGATTGGGGGCTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGAAGAGAGAACGGCGGTaGCCGGGGGCGCGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: AGPAMGLDDKILGSLGAGKRERR*PGARVC
Trigger: GCACACGCGCGCCCCCGGCCACCGCCGTTCTCTCTT...CCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTCCCGAGCTCCCCGCTTaGCTCCAGCTCCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSPELPA*LQLLGR
Trigger: CCGCCCCAGGAGCTGGAGCCAAGCGGGGAGCTCGGG...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTCTCGGTGGCCATGCATaGTCCGGGCCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSLGGHA*SGPGRG
Trigger: CCCGCGCCCAGGCCCGGACCATGCATGGCCACCGAG...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGCGGGGGACCTGGGTCTaGGCGAAGCCGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWRGTWV*AKPLGT
Trigger: GGTCCCCAGCGGCTTCGCTCAGACCCAGGTCCCCCG...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGGTCAGGCCGCTCCCCTaGCTCGGGCGGTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEVRPLP*LGRSHL
Trigger: GAGGTGGGACCGCCCGAGGCAGGGGAGCGGCCTGAC...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGCGGTTGGGCGAGGGTTaGAGGGCTACGCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTRLGEG*RATLGG
Trigger: CCCGCCGAGCGTAGCCCTCCAACCCTCGCCCAACCG...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGCAGGGCAAGACCCGGTaGCCTGGAGCAGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTQGKTR*PGAAPR
Trigger: CCTGGGCGCTGCTCCAGGCCACCGGGTCTTGCCCTG...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACTTTGGGGGCACCTGTaGCTTCGGGCCCGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGLWGHL*LRARCP
Trigger: CGGGCACCGGGCCCGAAGCCACAGGTGCCCCCAAAG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCGCCAAGAGCCGAACCTaGGCCCCTGCGCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSAKSRT*APARQQ
Trigger: CTGCTGGCGCGCAGGGGCTCAGGTTCGGCTCTTGGC...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGCCACCTCGAAGCCAATaGGGGGCAGGCTGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTPPRSQ*GAGCAG
Trigger: CCCAGCGCAGCCTGCCCCTCATTGGCTTCGAGGTGG...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGCGCAGGGCCCGGTGGTaGTGTGGACTGGGACCGCAG +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLERRARW*CGLGPQ
Trigger: CTGCGGTCCCAGTCCACAGCACCACCGGGCCCTGCG...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTGGGGCACTGGTGGCTaGGAGGTTGGCTGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: AGPAMGLDDKILGSLGAGWGTGG*EVGCGN
Trigger: GTTGCCACAGCCAACCTCGCAGCCACCAGTGCCCCA...CCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGGCTGCAGGCTGGACTaGTCCCAGGCACCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGGCRLD*SQAPRA
Trigger: TGCACGGGGTGCCTGGGAGCAGTCCAGCCTGCAGCC...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGACTTGGCTCCAGCTCCTaGGGCGGAGGCGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGLGSSS*GGGAGG
Trigger: TCCGCCCGCGCCTCCGCCCCAGGAGCTGGAGCCAAG...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGCAAGACCCGGTGGCCTaGAGCAGCGCCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTQDPVA*SSAQAG
Trigger: ACCAGCCTGGGCGCTGCTCCAGGCCACCGGGTCTTG...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGGGCCCGGTGGTGCTGTaGACTGGGACCGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTGPVVL*TGTAGQ
Trigger: TTGCCCTGCGGTCCCAGTCCACAGCACCACCGGGCC...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGTCACCCTCGGGGAGCTaGGGCACTGGTGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWSPSGS*GTGGCE
Trigger: CTCGCAGCCACCAGTGCCCCAGCTCCCCGAGGGTGA...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGATGGGAGCCAGGCCGGTaGGGGTCGGCCAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGWEPGR*GSAKAT
Trigger: TGTTGCCTTGGCCGACCCCCACCGGCCTGGCTCCCA...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGAGTAGTCCCAGACGATaGTCCAGCCGCGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTSSPRR*SSRGGR
Trigger: CCTGCCCCCGCGGCTGGAGCATCGTCTGGGACTACT...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGAGCGCTGCGCTTGGGCTaGGGGGCTCGCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGALRLG*GARLQP
Trigger: TGGCTGAAGGCGAGCCCCGCAGCCCAAGCGCAGCGC...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCCCGAACCTGAGCCCCTaGGCGCCAGCAGTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSPNLSP*APAVRV
Trigger: AACCCGGACTGCTGGCGCGCAGGGGCTCAGGTTCGG...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGATCCGGTTTCCCTGGTaGAGCCCAGGCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWIRFPW*SPGRGC
Trigger: GCAGCCTCGGCCTGGGCTGCACCAGGGAAACCGGAT...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTCCGGATGGGCGTAGGTaGCCGCTTCCCAAGATCCAC +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSPDGRR*PLPKIH
Trigger: GTGGATCTTGGGAAGCGGGCACCTACGCCCATCCGG...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACGGCGCTGGGGTGTATaGTGGCTGCAGGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGRRWGV*WLQAGL
Trigger: CAGTCCAGCCTGCAGCCAGCATACACCCCAGCGCCG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGTCCCCAGCTTCAGCCTaGGTCTCGGCGGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERSPASA*VSAAAG
Trigger: GCCCGCCGCCGCCGAGACCCAGGCTGAAGCTGGGGA...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGGCGGGGACTCTCCGGTaGACGGCGAGCCACTTCCGT +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEAGTLR*TASHFR
Trigger: ACGGAAGTGGCTCGCCGTCCACCGGAGAGTCCCCGC...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGATGGGAGCCAGGCCCTTaGCCACTCGGGGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGWEPGP*PLGGRQ
Trigger: CTGCCGACCCCCGAGTGGCCAAGGGCCTGGCTCCCA...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGGGGGAGCTGGGGCACTaGTGGCTGCGAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEGELGH*WLRGWL
Trigger: CAGCCAACCTCGCAGCCACCAGTGCCCCAGCTCCCC...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGTCCTCAGTCCTGGCCTaGAGCTCGAGGGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTSSVLA*SSRERC
Trigger: GCAGCGCTCCCTCGAGCTCCAGGCCAGGACTGAGGA...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTCGGGCACAGAACACCTaGTCCAGGAGATGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSRAQNT*SRRWSL
Trigger: CAGGCTCCATCTCCTGGATCAGGTGTTCTGTGCCCG...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGAGGGGAGCGCTGTCTATaGGGCTGCGGTTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGGERCL*GCGWAR
Trigger: CCTCGCCCAACCGCAGCCGCATAGACAGCGCTCCCC...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACATGCCCGCAGGCCTTaGAGTGGTGCCTGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGHARRP*SGACVW
Trigger: CCAAACGCAGGCACCACTGCAAGGCCTGCGGGCATG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCAGGCAGGAGAACGGCCTaGGCCGGGCTCCACCGTCCT +
Preference number: 4 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPGRRTA*AGLHRP
Trigger: AGGACGGTGGAGCCCGGCCCAGGCCGTTCTCCTGCC...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAAACTGGGGATCCAGTaGGCCGCCAAGAGCCGAACC +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSKLGIQ*AAKSRT
Trigger: GGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTT...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGAAAGCGCAGGGCCCGGTaGTGCTGTGGACTGGGACCG +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGKRRAR*CCGLGP
Trigger: CGGTCCCAGTCCACAGCACCACCGGGCCCTGCGCTT...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCGAGCTGGGGCACTGGTaGCTGCGAGGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSELGHW*LRGWLW
Trigger: CCACAGCCAACCTCGCAGCCACCAGTGCCCCAGCTC...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGTTGGCTGTGGCAACATaGCTGGCTCTGGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTLAVAT*LALGDL
Trigger: CAGGTCCCCCAGAGCCAGTCATGTTGCCACAGCCAA...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCCGCTGTCTATGCGGCTaGGGTTGGGCGAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSRCLCG*GWARVG
Trigger: TCCAACCCTCGCCCAACCGCAGCCGCATAGACAGCG...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGACGGGCTCAGCCCCACTaGAGAGACTCAAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGRAQPH*RDSSPQ
Trigger: CTGGGGGCTTGAGTCTCTGCAGTGGGGCTGAGCCCG...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACGGCCGGGAAGGAACTaGGGTTCCGAGCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGRPGRN*GSELLP
Trigger: TGGAAGAAGCTCGGAACCGCAGTTCCTTCCCGGCCG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTTTCCCACAAACCACATaGCCGCAGGCCTTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSFPQTT*PQALQW
Trigger: CCACTGCAAGGCCTGCGGGCATGTGGTTTGTGGGAA...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGCGTGTGCGCTGCGCTTaGGCTGCGGGGCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKRVRCA*AAGLAF
Trigger: GAAGGCGAGCCCCGCAGCCCAAGCGCAGCGCACACG...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCCTATGCGGCTGCGGTTaGGCGAGGGTTGGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSLCGCG*ARVGGL
Trigger: TAGCCCTCCAACCCTCGCCCAACCGCAGCCGCATAG...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGCAGGTAGCTGGGCTTTaGGGGCACCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEQVAGL*GHLWLR
Trigger: CCGAAGCCACAGGTGCCCCCAAAGCCCAGCTACCTG...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACTGTGGCAACATGACTaGCTCTGGGGGACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGLWQHD*LWGTWA
Trigger: AGCCCAGGTCCCCCAGAGCCAGTCATGTTGCCACAG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGGGGCCCCAGGGTCAGTaGCAGAGCTGGCACTTGAAT +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTGPQGQ*QSWHLN
Trigger: ATTCAAGTGCCAGCTCTGCCACTGACCCTGGGGCCC...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCCCTGTCCTGCCCGCTaGCCCTGCCATGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERPCPAR*PCHGSG
Trigger: TCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGG...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGTGGGGACCTTCTGGATaGGGCTCTAGGCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTWGPSG*GSRLWP
Trigger: TGGCCAAAGCCTAGAGCCTCATCCAGAAGGTCCCCA...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGATGCCCGCTTCAGTGGTaGAGGACGCTGGCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGCPLQW*RTLARG
Trigger: ACCCCTAGCCAGCGTCCTTCACCACTGAAGCGGGCA...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTGTTGGATGGCGAGCTaGTGCTATCAATGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: AGPAMGLDDKILGSLGAGCWMAS*CYQCRC
Trigger: ACAGCGGCATTGATAGCATCAGCTCGCCATCCAACA...CCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGGCTCTGTCCAGGTGTTaGCCAGCTCCACGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERALSRC*PAPRPG
Trigger: ACCGGGCCGTGGAGCTGGTCAACACCTGGACAGAGC...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGTCAGGAGGGTGGAGTTaGTGGCCTGGACCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTSGGWS*WPGPSL
Trigger: AAGACTGGGTCCAGGCCATCAACTCCACCCTCCTGA...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGGCAGGAAGCTGCAGATaGCGCTGTTCTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTAGSCR*RCSLQP
Trigger: TGGCTGCAGAGAACAGCGTCATCTGCAGCTTCCTGC...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTATTCGAGTGCTCTGCTaGTGTGGCGATCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSIRVLC*CGDQLQ
Trigger: CTGGAGCTGATCGCCACAGCAGCAGAGCACTCGAAT...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCGGCGAGCCACTTCCGTaGCCCCGGGGCGAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGGEPLP*PRGEKS
Trigger: CGACTTCTCGCCCCGGGGCCACGGAAGTGGCTCGCC...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGACAAGGAGCCGCAGCCTaGGCACGCAGTAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGQGAAA*ARSKGG
Trigger: GCCTCCTTTACTGCGTGCCCAGGCTGCGGCTCCTTG...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGATCTCCTCCTCAGTCCTaGCCTGGAGCTCGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGSPPQS*PGARGS
Trigger: GCTCCCTCGAGCTCCAGGCCAGGACTGAGGAGGAGA...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGATGCTGGCTGCAGGCTaGACTGCTCCCAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERMLAAG*TAPRHP
Trigger: GGGGTGCCTGGGAGCAGTCCAGCCTGCAGCCAGCAT...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGAGAAGCTGTAAGCCATaGGAGAGGCAGGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGPAMGLDDKILGSLGAGRSCKP*ERQERS
Trigger: AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCT...CCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGGGCAGAGCTGGCACTTaGATCCAGGTCTCCTACCTC +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEGRAGT*IQVSYL
Trigger: GAGGTAGGAGACCTGGATTCAAGTGCCAGCTCTGCC...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGAGGGACCACGAACCATaGCTTGTGCCATCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTRDHEP*LVPSFA
Trigger: GGCAAAGGATGGCACAAGGCATGGTTCGTGGTCCCT...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTCTCCTACCTCTGGTaGTTTGTGGGGAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGVSYLW*FVGNWV
Trigger: CACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGAC...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGAGCTCTCCTGGCTGGTTaGGAAGCGTTCTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGALLAG*EAFFLP
Trigger: CGGGAGGAAGAACGCTTCCCAACCAGCCAGGAGAGC...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGAGCAGCGCCCAGGCTaGTGTCCGAGGGTCCGACAA +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKEQRPG*CPRVRQ
Trigger: TTGTCGGACCCTCGGACACCAGCCTGGGCGCTGCTC...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGTGGTGCTGTGGACTaGGACCGCAGGGCAAGACCC +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKGGAVD*DRRARP
Trigger: GGGTCTTGCCCTGCGGTCCCAGTCCACAGCACCACC...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGAGGATCCGGTTTCCCTaGTGCAGCCCAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKRIRFP*CSPGRG
Trigger: GCCTCGGCCTGGGCTGCACCAGGGAAACCGGATCCT...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCCTGCGAGGTTGGCTGTaGCAACATGACTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSLRGWL*QHDWLW
Trigger: CCAGAGCCAGTCATGTTGCCACAGCCAACCTCGCAG...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGTGCCGCTGTCCCGGTTaGGCACCTTCTCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKCRCPG*APSHRP
Trigger: GGGACGGTGAGAAGGTGCCCAACCGGGACAGCGGCA...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGTTAGAGAAGATGCCGTaGACAACGTCGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTLEKMP*TTSAGK
Trigger: CTTCCCGGCCGACGTTGTCCACGGCATCTTCTCTAA...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAAGCTCCAGAGACTTTTaGGCATCCTTGCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGSSRDF*ASLLSG
Trigger: CCCGGACAGCAAGGATGCCCAAAAGTCTCTGGAGCT...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGACGCACGCTAAACTTCTaGCCAAGGAGCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGRTLNF*PRSRSL
Trigger: CAGGCTGCGGCTCCTTGGCCAGAAGTTTAGCGTGCG...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACAGGTCTCCTACCTCTaGTGCTTTGTGGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGQVSYL*CFVGNW
Trigger: CCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGGGTCAGTGGCAGAGCTaGCACTTGAATCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTGQWQS*HLNPGL
Trigger: GAGACCTGGATTCAAGTGCCAGCTCTGCCACTGACC...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCGGGGCCCGTCATCACTaGCGAAGCAGGTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGGARHH*RSRSPR
Trigger: GCGAGGAGACCTGCTTCGTCAGTGATGACGGGCCCC...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGCTCTTTGGTGGGGCTaGCAATGTCCTCCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKALWWG*QCPPRP
Trigger: GGGGCGAGGAGGACATTGTCAGCCCCACCAAAGAGC...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGAGCGCATGCACATGGTaGCTTCCTTTTCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLESACTW*LPFPGW
Trigger: CCATCCGGGAAAAGGAAGTCACCATGTGCATGCGCT...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGCAGGATGTCTCCAATaGGTGGATAGCGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGAGCLQ*VDSGPI
Trigger: AATGGGACCGCTATCCACGCATTGGAGACATCCTGC...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCAGCATTCGAGTGCTCTaGTGCTGTGGCGATCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSSIRVL*CCGDQL
Trigger: GAGCTGATCGCCACAGCAGCAGAGCACTCGAATGCT...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGTCCAGCGTCTGTTCATaGTTCAGGAGGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWSSVCS*FRRVEL
Trigger: CAACTCCACCCTCCTGAAGCATGAACAGACGCTGGA...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGCAGGCCTTGCAGTGGTaGCTGCGTTTGGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTQALQW*LRLVIE
Trigger: TTCTATCACCAAACGCAGGCACCACTGCAAGGCCTG...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGACGAACCATGCCTTGTaGCATCCTTTGCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWTNHAL*HPLPPF
Trigger: GAAGGGTGGCAAAGGATGGCACAAGGCATGGTTCGT...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTGATCTTGAAGACATaGCTTCTGTCAGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGVILKT*LLSGRS
Trigger: GGAGCGGCCTGACAGAAGGCATGTCTTCAAGATCAC...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCAGCTGGGGCCAGGGACTaGTCTATCCGAGGCGACAAT +
Preference number: 4 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPAGARD*SIRGDN
Trigger: ATTGTCGCCTCGGATAGACCAGTCCCTGGCCCCAGC...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGGCTCCATTTTGCGGATaGCAGCATTCGAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWAPFCG*QHSSAL
Trigger: CAGAGCACTCGAATGCTGCCATCCGCAAAATGGAGC...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTCCACGTTTGGAGAGTTaGGTGGGGTGTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSPRLES*VGCLHL
Trigger: AAGATGAAGACACCCCACCCAACTCTCCAAACGTGG...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGTCCTCAGACAGTGTaGGCCCCGGGCAGAACGTGT +
Preference number: 4 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPCPQTV*APGRTC
Trigger: ACACGTTCTGCCCGGGGCCCACACTGTCTGAGGACA...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGATGGGCAACTAGAGTGTaGGGTGGGGGCTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGWATRV*GGGSQF
Trigger: AAACTGGGAGCCCCCACCCCACACTCTAGTTGCCCA...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTGCCCTGCCATGGGTCTaGACGATAAAATACTGGGTA +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSALPWV*TIKYWV
Trigger: TACCCAGTATTTTATCGTCCAGACCCATGGCAGGGC...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
3UTR CAA 72 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTaGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVA*GPGRSCKPWER
Trigger: CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGAGGTTCGAGGCAGATTaGGGTTGGAGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWRFEAD*GWSSPL
Trigger: TAAAGGAGAGCTCCAACCTCAATCTGCCTCGAACCT...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCTGTGAAGACACTGGCTaGGGAGGCAGGGCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGCEDTG*GGRAGS
Trigger: CGACCCAGCCCTGCCTCCTCAGCCAGTGTCTTCACA...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGCAGGCTTCCTCCTTCTaGACCTCATGGATGATGACT +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTQASSF*TSWMMT
Trigger: AGTCATCATCCATGAGGTGCAGAAGGAGGAAGCCTG...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGGCTGCAATGTCAGGTTaGCACAGGCTTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEAAMSG*HRLPPS
Trigger: AGAAGGAGGAAGCCTGTGGCAACCTGACATTGCAGC...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGACTTTTGGGCATCCTTaGTGTCCGGGGAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERTFGHP*CPGSHG
Trigger: CCCATGGCTCCCCGGACAGCAAGGATGCCCAAAAGT...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGCATTCGCTCCATTTTaGGGATGGCAGCATTCGAGT +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGAFAPF*GWQHSS
Trigger: ACTCGAATGCTGCCATCCGCAAAATGGAGCGAATGC...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGCCTTGTGCCATCCTTTaGCACCCTTCTCCATGTAGT +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWPCAIL*HPSPCS
Trigger: ACTACATGGAGAAGGGTGGCAAAGGATGGCACAAGG...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCACTGGGCTCTCCTGGCTaGTTGGGAAGCGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPLGSPG*LGSVLP
Trigger: AGGAAGAACGCTTCCCAACCAGCCAGGAGAGCCCAG...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCGAGGGTCCGACAAACTaGGGATCCAGTGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGEGPTN*GSSGPP
Trigger: TGGCGGCCCACTGGATCCCCAGTTTGTCGGACCCTC...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGCATCTGCAGGTAGCTaGGCTTTGGGGGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKASAGS*ALGAPV
Trigger: CACAGGTGCCCCCAAAGCCCAGCTACCTGCAGATGC...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCTCACTGTCAACCTCTTaGGAGCCAGGCCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGSLSTS*EPGRWG
Trigger: CCCCCACCGGCCTGGCTCCCAAGAGGTTGACAGTGA...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCCGCAGGCCTTGCAGTaGTGCCTGCGTTTGGTGATA +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERPQALQ*CLRLVI
Trigger: TATCACCAAACGCAGGCACCACTGCAAGGCCTGCGG...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACAGTGCACACACGGTTaGAGCGGTTGTTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGQCTHG*SGCCHR
Trigger: TCTATGACAACAACCGCTCCAACCGTGTGTGCACTG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCATGGACCTCCGGCGCTaGGGTGTATGCTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGMDLRR*GVCWLQ
Trigger: CTGCAGCCAGCATACACCCCAGCGCCGGAGGTCCAT...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCCCTGTTTCTCCAGGATaGACCTCCGGCGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGPVSPG*TSGAGV
Trigger: CACCCCAGCGCCGGAGGTCCATCCTGGAGAAACAGG...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGGGCTCCCACCCTCCCTaGGGACAGGGATTAATAAAA +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEGSHPP*GQGLIK
Trigger: TTTTATTAATCCCTGTCCCCAGGGAGGGTGGGAGCC...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGCTCATTGGCAATGTaGAACACCTTTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: VALGPGRSCKPWERQERSSSLAM*NTFCCT
Trigger: TGTGCAGCAAAAGGTGTTTCACATTGCCAATGAGCT...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGATGAGGTATCGGTCTTaGGTGGTCCCATTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWMRYRS*VVPFFA
Trigger: AGCAAAGAATGGGACCACTCAAGACCGATACCTCAT...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGTCGGTCGGATCCAAGTaGGGGGTCTCTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERSVGSK*GVSSFS
Trigger: GGAGAAAGAAGAGACCCCGCACTTGGATCCGACCGA...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGACCACATAGCAATCAGTaGACACACGGTTGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGPHSNQ*THGWSG
Trigger: ACCGCTCCAACCGTGTGTGCACTGATTGCTATGTGG...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGAGTGGTGAAGGACGCTaGCTAGGGGTTTCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKSGEGR*LGVSVG
Trigger: CCCGACTGAAACCCCTAGCCAGCGTCCTTCACCACT...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGTGGTGGCTGCGAGGTTaGCTGTGGCAACATGACTGG +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKWWLRG*LWQHDW
Trigger: CCAGTCATGTTGCCACAGCCAACCTCGCAGCCACCA...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGATGATGACTTTAAACTaGGTGGAGCGCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTMMTLN*VERSVQ
Trigger: CTGGACAGAGCGCTCCACCCAGTTTAAAGTCATCAT...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGGTTTGGAGAGTTGGGTaGGGTGTCTTCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEVWRVG*GVFIFP
Trigger: AGGGAAGATGAAGACACCCCACCCAACTCTCCAAAC...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCCCAAGATCCACGTTTaGAGAGTTGGGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERPKIHV*RVGWGV
Trigger: GACACCCCACCCAACTCTCCAAACGTGGATCTTGGG...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGACCTCTGGTGCTTTGTaGGGAACTGGGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKTSGAL*GTGWRQ
Trigger: CTGCCTCCACCCAGTTCCCCACAAAGCACCAGAGGT...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCACCGCTGGCCCTGCCATaGGTCTGGACGATAAAATAC +
Preference number: 4 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPPLALP*VWTIKY
Trigger: GTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGG...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp AAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTTGTACGTTAACAGATAGTCCTTaGGAAGAAGCTCATAGCGGG +
Preference number: 4 (lower is better)
Translates to: KPWERQERSSCHPTWSCTLTDSP*EEAHSG
Trigger: CCCGCTATGAGCTTCTTCTCAAGGACTATCTGTTAA...CGTACAACTCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGTGGAGTTGTACGTGTaGAGACACTGGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKVELYV*RHWLRR
Trigger: CCTCCTCAGCCAGTGTCTTCACACGTACAACTCCAC...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCACCTTCAGCAGCTTATaGATTCGCTCCATTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSTFSSL*IRSILR
Trigger: CCGCAAAATGGAGCGAATGCATAAGCTGCTGAAGGT...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCATCTACATCAATGCGTaGCCGCACGCTAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSIYINA*PHAKLL
Trigger: CAGAAGTTTAGCGTGCGGGCACGCATTGATGTAGAT...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCTCCATCAGGGGCACTaGGATTTCTCTGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERLHQGH*DFSVLL
Trigger: GAGAAGGACAGAGAAATCCCAGTGCCCCTGATGGAG...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGACGATAAAATACTaGGTAGCCTTGGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPWTIKY*VALGPG
Trigger: ACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCA...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGAGTTCAAGTATTGACTaGGCTGGGAGGGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKSSSID*AGREGA
Trigger: AGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACT...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCACTCCTCGCTGTTGGATaGCGAGCTGATGCTATCAAT +
Preference number: 4 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPLLAVG*RADAIN
Trigger: ATTGATAGCATCAGCTCGCCATCCAACAGCGAGGAG...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGATGTCTCCAATGCGTaGATAGCGGTCCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKDVSNA*IAVPFL
Trigger: GAGGAATGGGACCGCTATCCACGCATTGGAGACATC...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCGGTCCCATTCTTTGCTaGCAGCTTAAGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGGPILC*QLKDVA
Trigger: GGCCACATCCTTAAGCTGTCAGCAAAGAATGGGACC...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCTGGGAGTTCAAGTATTaGCTGAGCTGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGWEFKY*LSWEGR
Trigger: CCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCA...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTCCTTCTGCACCTCATaGATGATGACTTTAAACTGG +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSSFCTS*MMTLNW
Trigger: CCAGTTTAAAGTCATCATCCATGAGGTGCAGAAGGA...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCGACAGCTTAAGGATGTaGCCTTCTTTTATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSDSLRM*PSFMSS
Trigger: AGAGCTCATAAAAGAAGGCCACATCCTTAAGCTGTC...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGATTGAGTTCAACAGTTTaGAAGTCTCCAGCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGLSSTV*KSPASV
Trigger: AACAGACGCTGGAGACTTTCAAACTGTTGAACTCAA...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGATCTTCCCTGTTTGTTaGGTTCAACAGTTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWIFPVC*VQQFES
Trigger: ACTTTCAAACTGTTGAACTCAACAAACAGGGAAGAT...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGTTTGCAGGAGCTCATTaGCAATGTGAAACACCTTTT +
Preference number: 4 (lower is better)
Translates to: VPVMGVQVLTELGGKGLEFAGAH*QCETPF
Trigger: AAAAGGTGTTTCACATTGCCAATGAGCTCCTGCAAA...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CCA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGTATCGGTCTTGAGTaGTCCCATTCTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKGIGLE*SHSLLT
Trigger: TGTCAGCAAAGAATGGGACCACTCAAGACCGATACC...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR TCA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGAAACTTCTCAATCAGTaGGGATACTGCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: IKYWVALGPGRSCKPWERKLLNQ*GYCCRT
Trigger: AGTTCTGCAGCAGTATCCTCACTGATTGAGAAGTTT...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR GCA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCTCTCCTTTAGCTCCATaGCATCTACATCAATGCGTG +
Preference number: 4 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGSPLAP*HLHQCV
Trigger: CACGCATTGATGTAGATGGCATGGAGCTAAAGGAGA...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 90 bp GCGCTTGGGCTGCGGGGCTCGCCTTCAGCCAGTAGTCCCAGACGATaGTCCAGCCGCGGGGGCAGGAGAACGGCCTGGGCCGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: ALGLRGSPSASSPRR*SSRGGRRTAWAGLH
Trigger: GTGGAGCCCGGCCCAGGCCGTTCTCCTGCCCCCGCGGCTGGAGCATCGTCTGGGACTACTGGCTGAAGGCGAGCCCCGCAGCCCAAGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 90 bp GAGAACGGCGGTGGCCGGGGGCGCGCGTGTGCGCTGCGCTTGGGCTaGGGGGCTCGCCTTCAGCCAGTAGTCCCAGACGATGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ENGGGRGRACALRLG*GARLQPVVPDDAPA
Trigger: GGCTGGAGCATCGTCTGGGACTACTGGCTGAAGGCGAGCCCCGCAGCCCAAGCGCAGCGCACACGCGCGCCCCCGGCCACCGCCGTTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp AGTAGTCCCAGACGATGCTCCAGCCGCGGGGGCAGGAGAACGGCCTaGGCCGGGCTCCACCGTCCTCCCCAGCTTCAGCCTGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: SSPRRCSSRGGRRTA*AGLHRPPQLQPGSR
Trigger: CCGAGACCCAGGCTGAAGCTGGGGAGGACGGTGGAGCCCGGCCCAGGCCGTTCTCCTGCCCCCGCGGCTGGAGCATCGTCTGGGACTACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp CCGGTGGTGCTGTGGACTGGGACCGCAGGGCAAGACCCGGTGGCCTaGAGCAGCGCCCAGGCTGGTGTCCGAGGGTCCGACAAACTGGGG +
Preference number: 5 (lower is better)
Translates to: PVVLWTGTAGQDPVA*SSAQAGVRGSDKLG
Trigger: CCCCAGTTTGTCGGACCCTCGGACACCAGCCTGGGCGCTGCTCCAGGCCACCGGGTCTTGCCCTGCGGTCCCAGTCCACAGCACCACCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp CCTCCAGGTGGTAAGAGAAGCGCAGGGCCCGGTGGTGCTGTGGACTaGGACCGCAGGGCAAGACCCGGTGGCCTGGAGCAGCGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PPGGKRSAGPGGAVD*DRRARPGGLEQRPG
Trigger: GCCTGGGCGCTGCTCCAGGCCACCGGGTCTTGCCCTGCGGTCCCAGTCCACAGCACCACCGGGCCCTGCGCTTCTCTTACCACCTGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 90 bp GGGTCCGACAAACTGGGGATCCAGTGGGCCGCCAAGAGCCGAACCTaGGCCCCTGCGCGCCAGCAGTCCGGGTTCCGAGGCTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GSDKLGIQWAAKSRT*APARQQSGFRGSRV
Trigger: GACCCTGGAGCCTCGGAACCCGGACTGCTGGCGCGCAGGGGCTCAGGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTTGTCGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 90 bp CAAACTGGGGATCCAGTGGGCCGCCAAGAGCCGAACCTGAGCCCCTaGGCGCCAGCAGTCCGGGTTCCGAGGCTCCAGGGTCCGAGTCGG +
Preference number: 5 (lower is better)
Translates to: QTGDPVGRQEPNLSP*APAVRVPRLQGPSR
Trigger: CCGACTCGGACCCTGGAGCCTCGGAACCCGGACTGCTGGCGCGCAGGGGCTCAGGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp TGGCCTGGAGCAGCGCCCAGGCTGGTGTCCGAGGGTCCGACAAACTaGGGATCCAGTGGGCCGCCAAGAGCCGAACCTGAGCCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: WPGAAPRLVSEGPTN*GSSGPPRAEPEPLR
Trigger: GCGCAGGGGCTCAGGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTTGTCGGACCCTCGGACACCAGCCTGGGCGCTGCTCCAGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp TGGGACCGCAGGGCAAGACCCGGTGGCCTGGAGCAGCGCCCAGGCTaGTGTCCGAGGGTCCGACAAACTGGGGATCCAGTGGGCCGCCAA +
Preference number: 5 (lower is better)
Translates to: WDRRARPGGLEQRPG*CPRVRQTGDPVGRQ
Trigger: TTGGCGGCCCACTGGATCCCCAGTTTGTCGGACCCTCGGACACCAGCCTGGGCGCTGCTCCAGGCCACCGGGTCTTGCCCTGCGGTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp AAGCAGCCACCGGTGCCTCCTCCATCTCCCTGTCCTCAGACAGTGTaGGCCCCGGGCAGAACGTGTCCCCTCGGCCCGCCCGGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: KQPPVPPPSPCPQTV*APGRTCPLGPPGQA
Trigger: TGCTTGGCCGGGCGGGCCGAGGGGACACGTTCTGCCCGGGGCCCACACTGTCTGAGGACAGGGAGATGGAGGAGGCACCGGTGGCTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp ACCTGTGGCTTCGGGCCCGGTGCCCGCTTCAGTGGTGAAGGACGCTaGCTAGGGGTTTCAGTCGGGGGACCTGGGTCTGAGCGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: TCGFGPGARFSGEGR*LGVSVGGPGSERSR
Trigger: GCGGCTTCGCTCAGACCCAGGTCCCCCGACTGAAACCCCTAGCCAGCGTCCTTCACCACTGAAGCGGGCACCGGGCCCGAAGCCACAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp GGAGCCAGCAGAAACAGGCAGCGGGAGGCCTCACCCTCGGGGAGCTaGGGCACTGGTGGCTGCGAGGTTGGCTGTGGCAACATGACTGGC +
Preference number: 5 (lower is better)
Translates to: GASRNRQREASPSGS*GTGGCEVGCGNMTG
Trigger: GCCAGTCATGTTGCCACAGCCAACCTCGCAGCCACCAGTGCCCCAGCTCCCCGAGGGTGAGGCCTCCCGCTGCCTGTTTCTGCTGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTGCGTGTGCGCTGCGCTaGGGCTGCGGGGCTCGCCTT +
Preference number: 5 (lower is better)
Translates to: VALGPGRSCKPWERQERSACALR*GCGARL
Trigger: AAGGCGAGCCCCGCAGCCCAAGCGCAGCGCACACGC...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 90 bp CCTGTTTCTCCAGGATGGACCTCCGGCGCTGGGGTGTATGCTGGCTaGAGGCTGGACTGCTCCCAGGCACCCCGTGCAAGGCCACATAGC +
Preference number: 5 (lower is better)
Translates to: PVSPGWTSGAGVYAG*RLDCSQAPRARPHS
Trigger: GCTATGTGGCCTTGCACGGGGTGCCTGGGAGCAGTCCAGCCTGCAGCCAGCATACACCCCAGCGCCGGAGGTCCATCCTGGAGAAACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 90 bp GCTCTGGGTGATCTTGAAGACATGCCTTCTGTCAGGCCGCTCCCCTaGCTCGGGCGGTCCCACCTCGAAGCCAATGAGGGGCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: ALGDLEDMPSVRPLP*LGRSHLEANEGQAA
Trigger: CGCAGCCTGCCCCTCATTGGCTTCGAGGTGGGACCGCCCGAGGCAGGGGAGCGGCCTGACAGAAGGCATGTCTTCAAGATCACCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGGCGGTTGGGCGAGGGTaGGAGGGCTACGCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWAVGRG*EGYARR
Trigger: CCGCCGAGCGTAGCCCTCCAACCCTCGCCCAACCGC...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 90 bp GGATGGACCTCCGGCGCTGGGGTGTATGCTGGCTGCAGGCTGGACTaGTCCCAGGCACCCCGTGCAAGGCCACATAGCAATCAGTGCACA +
Preference number: 5 (lower is better)
Translates to: GWTSGAGVYAGCRLD*SQAPRARPHSNQCT
Trigger: TGTGCACTGATTGCTATGTGGCCTTGCACGGGGTGCCTGGGAGCAGTCCAGCCTGCAGCCAGCATACACCCCAGCGCCGGAGGTCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 90 bp GGGCTGAAGTACCAGCTGAGGTGGCTCTGGGTGATCTTGAAGACATaGCTTCTGTCAGGCCGCTCCCCTGCCTCGGGCGGTCCCACCTCG +
Preference number: 5 (lower is better)
Translates to: GLKYQLRWLWVILKT*LLSGRSPASGGPTS
Trigger: CGAGGTGGGACCGCCCGAGGCAGGGGAGCGGCCTGACAGAAGGCATGTCTTCAAGATCACCCAGAGCCACCTCAGCTGGTACTTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp CTCCAGGATGGACCTCCGGCGCTGGGGTGTATGCTGGCTGCAGGCTaGACTGCTCCCAGGCACCCCGTGCAAGGCCACATAGCAATCAGT +
Preference number: 5 (lower is better)
Translates to: LQDGPPALGCMLAAG*TAPRHPVQGHIAIS
Trigger: ACTGATTGCTATGTGGCCTTGCACGGGGTGCCTGGGAGCAGTCCAGCCTGCAGCCAGCATACACCCCAGCGCCGGAGGTCCATCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp TCTCTTCTTTCTCCCCGAATGGGAATAGATCTGGGCTCTCCTGGCTaGTTGGGAAGCGTTCTTCCTCCCGCCGCAGCCGAGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: SLLSPRMGIDLGSPG*LGSVLPPAAAEAGG
Trigger: GCCCCCGGCCTCGGCTGCGGCGGGAGGAAGAACGCTTCCCAACCAGCCAGGAGAGCCCAGATCTATTCCCATTCGGGGAGAAAGAAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGGCCCGAGCTCCCCGCTaGGCTCCAGCTCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: IKYWVALGPGRSCKPWERARAPR*APAPGA
Trigger: CGCCCCAGGAGCTGGAGCCAAGCGGGGAGCTCGGGC...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 90 bp CTGGACTGCTCCCAGGCACCCCGTGCAAGGCCACATAGCAATCAGTaGACACACGGTTGGAGCGGTTGTTGTCATAGACGAGGCGGGCCC +
Preference number: 5 (lower is better)
Translates to: LDCSQAPRARPHSNQ*THGWSGCCHRRGGP
Trigger: GGGCCCGCCTCGTCTATGACAACAACCGCTCCAACCGTGTGTGCACTGATTGCTATGTGGCCTTGCACGGGGTGCCTGGGAGCAGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp CAGGCACCCCGTGCAAGGCCACATAGCAATCAGTGCACACACGGTTaGAGCGGTTGTTGTCATAGACGAGGCGGGCCCGGAACTCGGAGC +
Preference number: 5 (lower is better)
Translates to: QAPRARPHSNQCTHG*SGCCHRRGGPGTRS
Trigger: GCTCCGAGTTCCGGGCCCGCCTCGTCTATGACAACAACCGCTCCAACCGTGTGTGCACTGATTGCTATGTGGCCTTGCACGGGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAATGCCGCTGTCCCGGTaGGGCACCTTCTCACCGTCC +
Preference number: 5 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGMPLSR*GTFSPS
Trigger: GGACGGTGAGAAGGTGCCCAACCGGGACAGCGGCAT...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTACATGCCCGCAGGCCTaGCAGTGGTGCCTGCGTTTG +
Preference number: 5 (lower is better)
Translates to: VALGPGRSCKPWERQERSTCPQA*QWCLRL
Trigger: CAAACGCAGGCACCACTGCAAGGCCTGCGGGCATGT...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGACGCTCTGTCCAGGTGTaGACCAGCTCCACGGCCCGG +
Preference number: 5 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGRSVQV*TSSTAR
Trigger: CCGGGCCGTGGAGCTGGTCAACACCTGGACAGAGCG...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACCTACCTCTGGTGCTTaGTGGGGAACTGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGPTSGA*WGTGWR
Trigger: CCTCCACCCAGTTCCCCACAAAGCACCAGAGGTAGG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 90 bp CCACAGGCTTCCTCCTTCTGCACCTCATGGATGATGACTTTAAACTaGGTGGAGCGCTCTGTCCAGGTGTTGACCAGCTCCACGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PQASSFCTSWMMTLN*VERSVQVLTSSTAR
Trigger: CCGGGCCGTGGAGCTGGTCAACACCTGGACAGAGCGCTCCACCCAGTTTAAAGTCATCATCCATGAGGTGCAGAAGGAGGAAGCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATCTATGCGGCTGCGGTaGGGCGAGGGTTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPSMRLR*GEGWRA
Trigger: AGCCCTCCAACCCTCGCCCAACCGCAGCCGCATAGA...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGGCAGGTAGCTGGGCTTaGGGGGCACCTGTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: IKYWVALGPGRSCKPWERAGSWA*GAPVAS
Trigger: CGAAGCCACAGGTGCCCCCAAAGCCCAGCTACCTGC...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGGTCACTGTCAACCTCTaGGGAGCCAGGCCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: IKYWVALGPGRSCKPWERVTVNL*GARPVG
Trigger: CCCCACCGGCCTGGCTCCCAAGAGGTTGACAGTGAC...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTTTCCCTGTCCTGCCCGCTGGCCCTGCCATGGGTCTGGACGATAAAATACTGGACCACGAACCATGCCTaGTGCCATCCTTTGCCACCC +
Preference number: 5 (lower is better)
Translates to: VSLSCPLALPWVWTIKYWTTNHA*CHPLPP
Trigger: GGGTGGCAAAGGATGGCACAAGGCATGGTTCGTGGT...CCAGTATTTTATCGTCCAGACCCATGGCAGGGCCAGCGGGCAGGACAGGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTACCCAGCATTCGGGATaGAAAGTGCCCGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: VALGPGRSCKPWERQERSTQHSG*KVPVMG
Trigger: TCCCATCACGGGCACTTTCAATCCCGAATGCTGGGT...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCAGGCTCTCCTGGCTGGTaGGGAAGCGTTCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPGSPGW*GSVLPP
Trigger: GGGAGGAAGAACGCTTCCCAACCAGCCAGGAGAGCC...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCCAGGTCTCCTCGCTGTaGGATGGCGAGCTGATGCTA +
Preference number: 5 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSQVSSL*DGELML
Trigger: TAGCATCAGCTCGCCATCCAACAGCGAGGAGACCTG...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTTCCACGTTTGGAGAGTaGGGTGGGGTGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: VALGPGRSCKPWERQERSSTFGE*GGVSSS
Trigger: AGATGAAGACACCCCACCCAACTCTCCAAACGTGGA...AGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 90 bp GCCATCCTTTGCCACCCTTCTCCATGTAGTGCAGGAAGCTGCAGATaGCGCTGTTCTCTGCAGCCACTGAGGCCTGTTTCTCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: AILCHPSPCSAGSCR*RCSLQPLRPVSPGW
Trigger: CCATCCTGGAGAAACAGGCCTCAGTGGCTGCAGAGAACAGCGTCATCTGCAGCTTCCTGCACTACATGGAGAAGGGTGGCAAAGGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGTGCTGCAATGTCAGGTaGCCACAGGCTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VPVMGVQVLTELGGKGLECCNVR*PQASSF
Trigger: GAAGGAGGAAGCCTGTGGCAACCTGACATTGCAGCA...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCCGAGGCAGATTGAGGTaGGAGCTCTCCTTTAGCTCC +
Preference number: 5 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSRGRLR*ELSFSS
Trigger: GGAGCTAAAGGAGAGCTCCAACCTCAATCTGCCTCG...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTCCCAAGATCCACGTTaGGAGAGTTGGGTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSSQDPR*ESWVGC
Trigger: ACACCCCACCCAACTCTCCAAACGTGGATCTTGGGA...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGACAGTGGTGCCTGCGTTaGGTGATAGAATTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGQWCLR*VIELKG
Trigger: GCCCTTCAATTCTATCACCAAACGCAGGCACCACTG...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GAAGCTGTAAGCCATGGGAGAGGCAGGAGAGGTCTAGTTGCCACCCCACGTGGAGTAGGCCTTCTCAGTTaGCAGGAGCTCATTGGCAAT +
Preference number: 5 (lower is better)
Translates to: EAVSHGRGRRGLVATPRGVGLLS*QELIGN
Trigger: ATTGCCAATGAGCTCCTGCAAACTGAGAAGGCCTAC...TCCACGTGGGGTGGCAACTAGACCTCTCCTGCCTCTCCCATGGCTTACAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGGGGCTAGAGTGCATTCGCTCCATTTaGCGGATGGCAGCATTCGAG +
Preference number: 5 (lower is better)
Translates to: VPVMGVQVLTELGGKGLECIRSI*RMAAFE
Trigger: CTCGAATGCTGCCATCCGCAAAATGGAGCGAATGCA...CTCTAGCCCCTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp TGGCACTTGAATCCAGGTCTCCTACCTCTGGTGCTTTGTGGGGAACTGGGTGGACGTTTGGTGATAGAATaGAAGGGCTCCTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: WHLNPGLLPLVLCGELGGRLVIE*KGSWQR
Trigger: GCGCTGCCAGGAGCCCTTCAATTCTATCACCAAACG...TCCACCCAGTTCCCCACAAAGCACCAGAGGTAGGAGACCTGGATTCAAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCGACTTTTGGGCATCCTaGCTGTCCGGGGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGDFWAS*LSGEPW
Trigger: CCATGGCTCCCCGGACAGCAAGGATGCCCAAAAGTC...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCAAAATACTGGGTAGCCTaGGGGCCGGGTAGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPKYWVA*GPGRSC
Trigger: ACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTT...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCCAGCTCCAGAGACTTTaGGGCATCCTTGCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGQLQRL*GILAVR
Trigger: CCGGACAGCAAGGATGCCCAAAAGTCTCTGGAGCTG...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp CTGCCATGGGTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTATGAGGTATCGGTCTaGAGTGGTCCCATTCTTTGC +
Preference number: 5 (lower is better)
Translates to: LPWVWTIKYWVALGPGRSYEVSV*SGPILC
Trigger: GCAAAGAATGGGACCACTCAAGACCGATACCTCATA...GCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGACCCATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTATTGAGGGATGAGGGAGAAAAACGACCTAATTCAGGTAGGACTGGCAACGGCTTCAGGAGGGTGGAGTaGATGGCCTGGACCCAGTCT +
Preference number: 5 (lower is better)
Translates to: VLRDEGEKRPNSGRTGNGFRRVE*MAWTQS
Trigger: AGACTGGGTCCAGGCCATCAACTCCACCCTCCTGAA...GCCGTTGCCAGTCCTACCTGAATTAGGTCGTTTTTCTCCCTCATCCCTCAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GTCTGGACGATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCAATGGGAGTTCAAGTATaGACTGAGCTGGGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VWTIKYWVALGPGRSCKPMGVQV*TELGGK
Trigger: CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCAT...TGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTATCGTCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp ATAAAATACTGGGTAGCCTTGGGGCCGGGTAGAAGCTGTAAGCCATGGGAGAGGTCTTTTATGAGCTCTTaGGTGGGGCTGACAATGTCC +
Preference number: 5 (lower is better)
Translates to: IKYWVALGPGRSCKPWERSFMSS*VGLTMS
Trigger: GGACATTGTCAGCCCCACCAAAGAGCTCATAAAAGA...CCTCTCCCATGGCTTACAGCTTCTACCCGGCCCCAAGGCTACCCAGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS-3UTR CAA 90 bp GGATTGAAAGTGCCCGTGATGGGAGTTCAAGTATTGACTGAGCTGGGAGGGAAGAAGGTTCGAGGCAGATaGAGGTTGGAGCTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: GLKVPVMGVQVLTELGGKKVRGR*RLELSF
Trigger: AAAGGAGAGCTCCAACCTCAATCTGCCTCGAACCTT...CTTCCCTCCCAGCTCAGTCAATACTTGAACTCCCATCACGGGCACTTTCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 90 bp CACGTTTGGAGAGTTGGGTGGGGTGTCTTCATCTTCCCTGTTTGTTaGGTTCAACAGTTTGAAAGTCTCCAGCGTCTGTTCATGCTTCAG +
Preference number: 5 (lower is better)
Translates to: HVWRVGWGVFIFPVC*VQQFESLQRLFMLQ
Trigger: CTGAAGCATGAACAGACGCTGGAGACTTTCAAACTGTTGAACTCAACAAACAGGGAAGATGAAGACACCCCACCCAACTCTCCAAACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp GGTGGCCGGGGGCGCGCGTGTGCGCTGCGCTTGGGCTaGGGGGCTCGCCTTCAGCCAGTAGTCCCAGACGAT +
Preference number: 6 (lower is better)
Translates to: GGRGRACALRLG*GARLQPVVPDD
Trigger: ATCGTCTGGGACTACTGGCTGAAGGCGAGCCCCGCAGCCCAAGCGCAGCGCACACGCGCGCCCCCGGCCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp CTGCGGGGCTCGCCTTCAGCCAGTAGTCCCAGACGATaGTCCAGCCGCGGGGGCAGGAGAACGGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LRGSPSASSPRR*SSRGGRRTAWA
Trigger: GGCCCAGGCCGTTCTCCTGCCCCCGCGGCTGGAGCATCGTCTGGGACTACTGGCTGAAGGCGAGCCCCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp CTGTGGACTGGGACCGCAGGGCAAGACCCGGTGGCCTaGAGCAGCGCCCAGGCTGGTGTCCGAGGGTCCGAC +
Preference number: 6 (lower is better)
Translates to: LWTGTAGQDPVA*SSAQAGVRGSD
Trigger: GTCGGACCCTCGGACACCAGCCTGGGCGCTGCTCCAGGCCACCGGGTCTTGCCCTGCGGTCCCAGTCCACAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp CCGGTGCCTCCTCCATCTCCCTGTCCTCAGACAGTGTaGGCCCCGGGCAGAACGTGTCCCCTCGGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: PVPPPSPCPQTV*APGRTCPLGPP
Trigger: GGGCGGGCCGAGGGGACACGTTCTGCCCGGGGCCCACACTGTCTGAGGACAGGGAGATGGAGGAGGCACCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 90 bp GGAAGAGAGAACGGCGGTGGCCGGGGGCGCGCGTGTGCGCTGCGCTaGGGCTGCGGGGCTCGCCTTCAGCCAGTAGTCCCAGACGATGCT +
Preference number: 6 (lower is better)
Translates to: GRENGGGRGRACALR*GCGARLQPVVPDDA
Trigger: AGCATCGTCTGGGACTACTGGCTGAAGGCGAGCCCCGCAGCCCAAGCGCAGCGCACACGCGCGCCCCCGGCCACCGCCGTTCTCTCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp GATCCAGTGGGCCGCCAAGAGCCGAACCTGAGCCCCTaGGCGCCAGCAGTCCGGGTTCCGAGGCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: DPVGRQEPNLSP*APAVRVPRLQG
Trigger: ACCCTGGAGCCTCGGAACCCGGACTGCTGGCGCGCAGGGGCTCAGGTTCGGCTCTTGGCGGCCCACTGGATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp GGAGCGCTGTCTATGCGGCTGCGGTTGGGCGAGGGTTaGAGGGCTACGCTCGGCGGGGACTCTCCGGTGGAC +
Preference number: 6 (lower is better)
Translates to: GALSMRLRLGEG*RATLGGDSPVD
Trigger: GTCCACCGGAGAGTCCCCGCCGAGCGTAGCCCTCCAACCCTCGCCCAACCGCAGCCGCATAGACAGCGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 72 bp GGGAGCGCTGTCTATGCGGCTGCGGTTGGGCGAGGGTaGGAGGGCTACGCTCGGCGGGGACTCTCCGGTGGA +
Preference number: 6 (lower is better)
Translates to: GSAVYAAAVGRG*EGYARRGLSGG
Trigger: TCCACCGGAGAGTCCCCGCCGAGCGTAGCCCTCCAACCCTCGCCCAACCGCAGCCGCATAGACAGCGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp AAACTGGGGATCCAGTGGGCCGCCAAGAGCCGAACCTaGGCCCCTGCGCGCCAGCAGTCCGGGTTCCGAGGC +
Preference number: 6 (lower is better)
Translates to: KLGIQWAAKSRT*APARQQSGFRG
Trigger: GCCTCGGAACCCGGACTGCTGGCGCGCAGGGGCTCAGGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp GGTAAGAGAAGCGCAGGGCCCGGTGGTGCTGTGGACTaGGACCGCAGGGCAAGACCCGGTGGCCTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: GKRSAGPGGAVD*DRRARPGGLEQ
Trigger: CTGCTCCAGGCCACCGGGTCTTGCCCTGCGGTCCCAGTCCACAGCACCACCGGGCCCTGCGCTTCTCTTACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp CACCTGTGGCTTCGGGCCCGGTGCCCGCTTCAGTGGTaGAGGACGCTGGCTAGGGGTTTCAGTCGGGGGACC +
Preference number: 6 (lower is better)
Translates to: HLWLRARCPLQW*RTLARGFSRGT
Trigger: GGTCCCCCGACTGAAACCCCTAGCCAGCGTCCTTCACCACTGAAGCGGGCACCGGGCCCGAAGCCACAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp GCTCCCCTGCCTCGGGCGGTCCCACCTCGAAGCCAATaGGGGGCAGGCTGCGCTGGGCTTTCACATCCTGAG +
Preference number: 6 (lower is better)
Translates to: APLPRAVPPRSQ*GAGCAGLSHPE
Trigger: CTCAGGATGTGAAAGCCCAGCGCAGCCTGCCCCTCATTGGCTTCGAGGTGGGACCGCCCGAGGCAGGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp GCAGCGCCCAGGCTGGTGTCCGAGGGTCCGACAAACTaGGGATCCAGTGGGCCGCCAAGAGCCGAACCTGAG +
Preference number: 6 (lower is better)
Translates to: AAPRLVSEGPTN*GSSGPPRAEPE
Trigger: CTCAGGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTTGTCGGACCCTCGGACACCAGCCTGGGCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp AGAAACAGGCAGCGGGAGGCCTCACCCTCGGGGAGCTaGGGCACTGGTGGCTGCGAGGTTGGCTGTGGCAAC +
Preference number: 6 (lower is better)
Translates to: RNRQREASPSGS*GTGGCEVGCGN
Trigger: GTTGCCACAGCCAACCTCGCAGCCACCAGTGCCCCAGCTCCCCGAGGGTGAGGCCTCCCGCTGCCTGTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp GGACCTCCGGCGCTGGGGTGTATGCTGGCTGCAGGCTaGACTGCTCCCAGGCACCCCGTGCAAGGCCACATA +
Preference number: 6 (lower is better)
Translates to: GPPALGCMLAAG*TAPRHPVQGHI
Trigger: TATGTGGCCTTGCACGGGGTGCCTGGGAGCAGTCCAGCCTGCAGCCAGCATACACCCCAGCGCCGGAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp TTCGGGCCCGGTGCCCGCTTCAGTGGTGAAGGACGCTaGCTAGGGGTTTCAGTCGGGGGACCTGGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: FGPGARFSGEGR*LGVSVGGPGSE
Trigger: CTCAGACCCAGGTCCCCCGACTGAAACCCCTAGCCAGCGTCCTTCACCACTGAAGCGGGCACCGGGCCCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 90 bp CTCCTCCTCCTCGTCGTCCTCCTCCTCCAGGTCACTGTCAACCTCTaGGGAGCCAGGCCGGTGGGGGTCGGCCAAGGCAACAGGCACACT +
Preference number: 6 (lower is better)
Translates to: LLLLVVLLLQVTVNL*GARPVGVGQGNRHT
Trigger: AGTGTGCCTGTTGCCTTGGCCGACCCCCACCGGCCTGGCTCCCAAGAGGTTGACAGTGACCTGGAGGAGGAGGACGACGAGGAGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp TCCAGGTCACTGTCAACCTCTTGGGAGCCAGGCCGGTaGGGGTCGGCCAAGGCAACAGGCACACTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SRSLSTSWEPGR*GSAKATGTLAR
Trigger: CCTGGCTAGTGTGCCTGTTGCCTTGGCCGACCCCCACCGGCCTGGCTCCCAAGAGGTTGACAGTGACCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp GATCTTGAAGACATGCCTTCTGTCAGGCCGCTCCCCTaGCTCGGGCGGTCCCACCTCGAAGCCAATGAGGGG +
Preference number: 6 (lower is better)
Translates to: DLEDMPSVRPLP*LGRSHLEANEG
Trigger: CCCCTCATTGGCTTCGAGGTGGGACCGCCCGAGGCAGGGGAGCGGCCTGACAGAAGGCATGTCTTCAAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 90 bp TCGCTGTTGGATGGCGAGCTGATGCTATCAATGCCGCTGTCCCGGTaGGGCACCTTCTCACCGTCCCGGGGCCCAGGAGCCAGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: SLLDGELMLSMPLSR*GTFSPSRGPGASRN
Trigger: GTTTCTGCTGGCTCCTGGGCCCCGGGACGGTGAGAAGGTGCCCAACCGGGACAGCGGCATTGATAGCATCAGCTCGCCATCCAACAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp AGAAGATGCCGTGGACAACGTCGGCCGGGAAGGAACTaGGGTTCCGAGCTTCTTCCAGCAGCCGGGCACAGA +
Preference number: 6 (lower is better)
Translates to: RRCRGQRRPGRN*GSELLPAAGHR
Trigger: TCTGTGCCCGGCTGCTGGAAGAAGCTCGGAACCGCAGTTCCTTCCCGGCCGACGTTGTCCACGGCATCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp TACCAGCTGAGGTGGCTCTGGGTGATCTTGAAGACATaGCTTCTGTCAGGCCGCTCCCCTGCCTCGGGCGGT +
Preference number: 6 (lower is better)
Translates to: YQLRWLWVILKT*LLSGRSPASGG
Trigger: ACCGCCCGAGGCAGGGGAGCGGCCTGACAGAAGGCATGTCTTCAAGATCACCCAGAGCCACCTCAGCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp TCTCCCCGAATGGGAATAGATCTGGGCTCTCCTGGCTaGTTGGGAAGCGTTCTTCCTCCCGCCGCAGCCGAG +
Preference number: 6 (lower is better)
Translates to: SPRMGIDLGSPG*LGSVLPPAAAE
Trigger: CTCGGCTGCGGCGGGAGGAAGAACGCTTCCCAACCAGCCAGGAGAGCCCAGATCTATTCCCATTCGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 90 bp TCTGTCTCAGGGCTGAAGTACCAGCTGAGGTGGCTCTGGGTGATCTaGAAGACATGCCTTCTGTCAGGCCGCTCCCCTGCCTCGGGCGGT +
Preference number: 6 (lower is better)
Translates to: SVSGLKYQLRWLWVI*KTCLLSGRSPASGG
Trigger: ACCGCCCGAGGCAGGGGAGCGGCCTGACAGAAGGCATGTCTTCAAGATCACCCAGAGCCACCTCAGCTGGTACTTCAGCCCTGAGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp CCTGGGTCTGAGCGAAGCCGCTGGGGACCTTCTGGATaGGGCTCTAGGCTTTGGCCAGGGTCAAGGGACAAA +
Preference number: 6 (lower is better)
Translates to: PGSERSRWGPSG*GSRLWPGSRDK
Trigger: TTTGTCCCTTGACCCTGGCCAAAGCCTAGAGCCTCATCCAGAAGGTCCCCAGCGGCTTCGCTCAGACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 72 bp GGGCTGAAGTACCAGCTGAGGTGGCTCTGGGTGATCTaGAAGACATGCCTTCTGTCAGGCCGCTCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: GLKYQLRWLWVI*KTCLLSGRSPA
Trigger: GGCAGGGGAGCGGCCTGACAGAAGGCATGTCTTCAAGATCACCCAGAGCCACCTCAGCTGGTACTTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp CGTGCAAGGCCACATAGCAATCAGTGCACACACGGTTaGAGCGGTTGTTGTCATAGACGAGGCGGGCCCGGA +
Preference number: 6 (lower is better)
Translates to: RARPHSNQCTHG*SGCCHRRGGPG
Trigger: TCCGGGCCCGCCTCGTCTATGACAACAACCGCTCCAACCGTGTGTGCACTGATTGCTATGTGGCCTTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 72 bp GGCCCGTCATCACTGACGAAGCAGGTCTCCTCGCTGTaGGATGGCGAGCTGATGCTATCAATGCCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: GPSSLTKQVSSL*DGELMLSMPLS
Trigger: GGACAGCGGCATTGATAGCATCAGCTCGCCATCCAACAGCGAGGAGACCTGCTTCGTCAGTGATGACGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp GCACATGGTGACTTCCTTTTCCCGGATGGGCGTAGGTaGCCGCTTCCCAAGATCCACGTTTGGAGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: AHGDFLFPDGRR*PLPKIHVWRVG
Trigger: CCCAACTCTCCAAACGTGGATCTTGGGAAGCGGGCACCTACGCCCATCCGGGAAAAGGAAGTCACCATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp GCTAGAGCCCCCAATCAGACATGGGCAACTAGAGTGTaGGGTGGGGGCTCCCAGTTTGTCCCAAACCCTCTA +
Preference number: 6 (lower is better)
Translates to: ARAPNQTWATRV*GGGSQFVPNPL
Trigger: TAGAGGGTTTGGGACAAACTGGGAGCCCCCACCCCACACTCTAGTTGCCCATGTCTGATTGGGGGCTCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp TCCCAGGCACCCCGTGCAAGGCCACATAGCAATCAGTaGACACACGGTTGGAGCGGTTGTTGTCATAGACGA +
Preference number: 6 (lower is better)
Translates to: SQAPRARPHSNQ*THGWSGCCHRR
Trigger: TCGTCTATGACAACAACCGCTCCAACCGTGTGTGCACTGATTGCTATGTGGCCTTGCACGGGGTGCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp GTCATCACTGACGAAGCAGGTCTCCTCGCTGTTGGATaGCGAGCTGATGCTATCAATGCCGCTGTCCCGGTT +
Preference number: 6 (lower is better)
Translates to: VITDEAGLLAVG*RADAINAAVPV
Trigger: AACCGGGACAGCGGCATTGATAGCATCAGCTCGCCATCCAACAGCGAGGAGACCTGCTTCGTCAGTGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp CACTTCCCACAAACCACATGCCCGCAGGCCTTGCAGTaGTGCCTGCGTTTGGTGATAGAATTGAAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: HFPQTTCPQALQ*CLRLVIELKGS
Trigger: GGAGCCCTTCAATTCTATCACCAAACGCAGGCACCACTGCAAGGCCTGCGGGCATGTGGTTTGTGGGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS GCA 72 bp TTTCAGGGACCACGAACCATGCCTTGTGCCATCCTTTaGCACCCTTCTCCATGTAGTGCAGGAAGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: FQGPRTMPCAIL*HPSPCSAGSCR
Trigger: TCTGCAGCTTCCTGCACTACATGGAGAAGGGTGGCAAAGGATGGCACAAGGCATGGTTCGTGGTCCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CCA 72 bp TCCTCCTTCTGCACCTCATGGATGATGACTTTAAACTaGGTGGAGCGCTCTGTCCAGGTGTTGACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SSFCTSWMMTLN*VERSVQVLTSS
Trigger: GGAGCTGGTCAACACCTGGACAGAGCGCTCCACCCAGTTTAAAGTCATCATCCATGAGGTGCAGAAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 72 bp CGCTGCTTTCCTGACACCAGGAAGGTTCGAGGCAGATaGAGGTTGGAGCTCTCCTTTAGCTCCATGCCATCT +
Preference number: 6 (lower is better)
Translates to: RCFPDTRKVRGR*RLELSFSSMPS
Trigger: AGATGGCATGGAGCTAAAGGAGAGCTCCAACCTCAATCTGCCTCGAACCTTCCTGGTGTCAGGAAAGCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 90 bp CACCTGATCCAGGAGATGGAGCCTGGAAACGTAGGCCTTCTCAGTTaGCAGGAGCTCATTGGCAATGTGAAACACCTTTTGCTGCACAGT +
Preference number: 6 (lower is better)
Translates to: HLIQEMEPGNVGLLS*QELIGNVKHLLLHS
Trigger: ACTGTGCAGCAAAAGGTGTTTCACATTGCCAATGAGCTCCTGCAAACTGAGAAGGCCTACGTTTCCAGGCTCCATCTCCTGGATCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp GACAATCACAGGCTCTCTTTCAAACTTCTCAATCAGTaGGGATACTGCTGCAGAACTGGGGCTGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: DNHRLSFKLLNQ*GYCCRTGAGLC
Trigger: GCAGAGGCCAGCCCCAGTTCTGCAGCAGTATCCTCACTGATTGAGAAGTTTGAAAGAGAGCCTGTGATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 72 bp TTTCCTGACACCAGGAAGGTTCGAGGCAGATTGAGGTaGGAGCTCTCCTTTAGCTCCATGCCATCTACATCA +
Preference number: 6 (lower is better)
Translates to: FPDTRKVRGRLR*ELSFSSMPSTS
Trigger: TGATGTAGATGGCATGGAGCTAAAGGAGAGCTCCAACCTCAATCTGCCTCGAACCTTCCTGGTGTCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp AGGAGGCGGTCGTTGAATAGTATGAGGTATCGGTCTTaGGTGGTCCCATTCTTTGCTGACAGCTTAAGGATG +
Preference number: 6 (lower is better)
Translates to: RRRSLNSMRYRS*VVPFFADSLRM
Trigger: CATCCTTAAGCTGTCAGCAAAGAATGGGACCACTCAAGACCGATACCTCATACTATTCAACGACCGCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS CAA 72 bp AGTTTGCAGGAGCTCATTGGCAATGTGAAACACCTTTaGCTGCACAGTCAACTCCACAGACTCCTGTCTCTC +
Preference number: 6 (lower is better)
Translates to: SLQELIGNVKHL*LHSQLHRLLSL
Trigger: GAGAGACAGGAGTCTGTGGAGTTGACTGTGCAGCAAAAGGTGTTTCACATTGCCAATGAGCTCCTGCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp AGAGTTGGGTGGGGTGTCTTCATCTTCCCTGTTTGTTaGGTTCAACAGTTTGAAAGTCTCCAGCGTCTGTTC +
Preference number: 6 (lower is better)
Translates to: RVGWGVFIFPVC*VQQFESLQRLF
Trigger: GAACAGACGCTGGAGACTTTCAAACTGTTGAACTCAACAAACAGGGAAGATGAAGACACCCCACCCAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp TATGAGGTATCGGTCTTGAGTGGTCCCATTCTTTGCTaGCAGCTTAAGGATGTGGCCTTCTTTTATGAGCTC +
Preference number: 6 (lower is better)
Translates to: YEVSVLSGPILC*QLKDVAFFYEL
Trigger: GAGCTCATAAAAGAAGGCCACATCCTTAAGCTGTCAGCAAAGAATGGGACCACTCAAGACCGATACCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375135.4
CDS TCA 72 bp TGTCTTCATCTTCCCTGTTTGTTGAGTTCAACAGTTTaGAAGTCTCCAGCGTCTGTTCATGCTTCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: CLHLPCLLSSTV*KSPASVHASGG
Trigger: CCCTCCTGAAGCATGAACAGACGCTGGAGACTTTCAAACTGTTGAACTCAACAAACAGGGAAGATGAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375135.4