RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGB (Homo sapiens)

Ensembl gene IDs: ENSG00000171564

Ensembl transcript IDs: ENST00000302068.9, ENST00000425838.5, ENST00000473984.1, ENST00000497097.5, ENST00000498375.2, ENST00000502545.5, ENST00000509493.1

Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGAATCCGGGAATGGCCAACCCAGAGAGATTCACTTCTTATCTGTaGAGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATG +
Preference number: 1 (lower is better)
Translates to: RNPGMANPERFTSYL*RTLELPACPLELRM
Trigger: CATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGGCCATTCCCGGATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR TCA 90 bp AATGGCCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTaGACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACC +
Preference number: 1 (lower is better)
Translates to: NGQPREIHFLSVKDT*TPCLSVGTQDVQGT
Trigger: GGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR TCA 90 bp AGGGTCATAAGGTTGCCCGTGGCGACTTGGAGTGAAGTGTTGAGATaGTATGCCCATTTCATGGGGAGAAGTAGAAAGAACAGAAAAACC +
Preference number: 1 (lower is better)
Translates to: RVIRLPVATWSEVLR*YAHFMGRSRKNRKT
Trigger: GGTTTTTCTGTTCTTTCTACTTCTCCCCATGAAATGGGCATATCATCTCAACACTTCACTCCAAGTCGCCACGGGCAACCTTATGACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR CCA 90 bp TCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTGTCCGTTaGAACTCAGGATGTGCAAGGAACCAAGGCCTTTTATTTTGGGTT +
Preference number: 1 (lower is better)
Translates to: SLLICEGHLNSLPVR*NSGCARNQGLLFWV
Trigger: AACCCAAAATAAAAGGCCTTGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR CCA 90 bp TCTGTTAAATGTGATGGCAAAGCGGTAGGTGAGTATGGGCTCCAGTaGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTT +
Preference number: 1 (lower is better)
Translates to: SVKCDGKAVGEYGLQ*DRTCGRETRSKVKV
Trigger: AACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGAGCCCATACTCACCTACCGCTTTGCCATCACATTTAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR TCA 90 bp GTTGTGAACGCTTCTCCTTCCTTACAAGTGCAAAGCCTAACTCATTaGATGTGTGGATTACAAAACAAGAAAACATTAACTTATTGCAAC +
Preference number: 1 (lower is better)
Translates to: VVNASPSLQVQSLTH*MCGLQNKKTLTYCN
Trigger: GTTGCAATAAGTTAATGTTTTCTTGTTTTGTAATCCACACATTCAATGAGTTAGGCTTTGCACTTGTAAGGAAGGAGAAGCGTTCACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR TCA 90 bp GCATATTTCCAAAATCATGAAATCGTATATGTTAAACACTTTGTATaGCAGATGCATCCGACAGCATTAACTCAAGCATACCCTGAGAAT +
Preference number: 1 (lower is better)
Translates to: AYFQNHEIVYVKHFV*QMHPTALTQAYPEN
Trigger: ATTCTCAGGGTATGCTTGAGTTAATGCTGTCGGATGCATCTGTCATACAAAGTGTTTAACATATACGATTTCATGATTTTGGAAATATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CCA 90 bp GTCTGGGTCAGCGTGAAGACAGCCTCCAGCATCAGGGGCTTTTCTTTCTACTTTGGCAGCTGCTTTGGCTaGACGAGCCCGATAGCCACC +
Preference number: 2 (lower is better)
Translates to: VWVSVKTASSIRGFSFYFGSCFG*TSPIAT
Trigger: GGTGGCTATCGGGCTCGTCCAGCCAAAGCAGCTGCC...AAAGTAGAAAGAAAAGCCCCTGATGCTGGAGGCTGTCTTCACGCTGACCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR CAA 90 bp GTGAAGACAGCCTCCAGCATCAGGGGCTTTTCTTTCTACTTTCTTTaGAGTGGCAGCTGCTTTGGCTGGACGAGCCCGATAGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: VKTASSIRGFSFYFL*SGSCFGWTSPIATS
Trigger: GGAGGTGGCTATCGGGCTCGTCCAGCCAAAGCAGCTGCCACTCAAAAGAAAGTAGAAAGAAAAGCCCCTGATGCTGGAGGCTGTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR-3UTR TCA 90 bp TCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGAAGAGGAGGGATAGCCACCTCCACTaGTGGGCGGTGGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: SFATGLSANTCTERKKRRDSHLH*WAVGQA
Trigger: GGCCTGCCCCACCGCCCATCAGTGGAGGTGGCTATC...CCTCCTCTTCTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR-3UTR TCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGGAACTCCTGACCTTGTaGCCGCCCGCCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLELLTL*PPASAS
Trigger: GGAGGCTGAGGCGGGCGGTCACAAGGTCAGGAGTTC...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR CAA 90 bp GAATGGCCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTaGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAAC +
Preference number: 2 (lower is better)
Translates to: EWPTQRDSLLICEGH*NSLPVRWNSGCARN
Trigger: GTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CCA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATCACCTCACAGGTAGCTaGGACTACAGGCACCTGCCA +
Preference number: 2 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDHLTGS*DYRHLP
Trigger: TGGCAGGTGCCTGTAGTCCCAGCTACCTGTGAGGTG...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CCA 90 bp CTTTTACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTCAACACCCCCAGGTCTaGGTCAGCGTGAAGACAGCC +
Preference number: 2 (lower is better)
Translates to: LLLASASFATGLSANTCTQHPQV*VSVKTA
Trigger: GGCTGTCTTCACGCTGACCCAGACCTGGGGGTGTTG...AGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR-3UTR TCA 90 bp GCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGTTGTCAAGGGGTCGATaGCCACGGGCACTGAAGAAA +
Preference number: 2 (lower is better)
Translates to: ASASFATGLSANTCTERKLSRGR*PRALKK
Trigger: TTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAA...CTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR-3UTR GCA 90 bp TACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAACTTTTGAGTGGCAGCTaGTTTGGCTGGACGAGCCCG +
Preference number: 2 (lower is better)
Translates to: YLLLPLLPQVFQQIHVLKLLSGS*FGWTSP
Trigger: CGGGCTCGTCCAGCCAAAGCAGCTGCCACTCAAAAG...TTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR-3UTR CCA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCAGATATGCCCATTTCATaGGGAGAAGTAGAAAGAACA +
Preference number: 2 (lower is better)
Translates to: RTLELPACPLELRMCKEPDMPIS*GEVERT
Trigger: TGTTCTTTCTACTTCTCCCCATGAAATGGGCATATC...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTCACTTGGTGAAGACTTaGTGCAGATTGTCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPHLVKT*CRLSSW
Trigger: CCAAGAGGACAATCTGCATCAAGTCTTCACCAAGTG...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATCGTGGCGACTTGGAGTaGAGTGTTGAGATGATATGC +
Preference number: 2 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDRGDLE*SVEMIC
Trigger: GCATATCATCTCAACACTTCACTCCAAGTCGCCACG...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR GCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGTTGCCCAGGCTGGAGTaGAGTGTTGAGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLLPRLE*SVEILA
Trigger: AGCCAAGATCTCAACACTGCACTCCAGCCTGGGCAA...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTGGTTTATTAGCTATTTaGGGTTGTGAACGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPGLLAI*GCERFS
Trigger: GGAGAAGCGTTCACAACCTCAAATAGCTAATAAACC...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATAGTGAAGTGTTGAGATaGTATGCCCATTTCATGGGG +
Preference number: 2 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDSEVLR*YAHFMG
Trigger: CCCCATGAAATGGGCATATCATCTCAACACTTCACT...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp TCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGAAGAGGAGGAAAGCCTCTTGCAACTaGCATCCTGTAGGACACAAC +
Preference number: 2 (lower is better)
Translates to: SFATGLSANTCTERKKRRKASCN*HPVGHN
Trigger: GTTGTGTCCTACAGGATGTCAGTTGCAAGAGGCTTT...CCTCCTCTTCTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR-3UTR GCA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCAGTCACACTCACGTCTaGTTGAGAGTTTTAGAGGAA +
Preference number: 2 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFSHTHV*LRVLEE
Trigger: TTCCTCTAAAACTCTCAAGCAGACGTGAGTGTGACT...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR GCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTGCAACAGGCATATTCTaGTCCCTATTTCATTATTTC +
Preference number: 2 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPATGIF*SLFHYF
Trigger: GAAATAATGAAATAGGGAGCAGAATATGCCTGTTGC...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTTTTTCCTTTCCGTCATaGTTTTCCTACGACAAGGAT +
Preference number: 2 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPFSFPS*FSYDKD
Trigger: ATCCTTGTCGTAGGAAAACCATGACGGAAAGGAAAA...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTCAAAGCCTAACTCATTaGATGTGTGGATTACAAAAC +
Preference number: 2 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPQSLTH*MCGLQN
Trigger: GTTTTGTAATCCACACATTCAATGAGTTAGGCTTTG...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACAGCTATTTGAGGTTGTaGACGCTTCTCCTTCCTTAC +
Preference number: 2 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDSYLRL*TLLLPY
Trigger: GTAAGGAAGGAGAAGCGTTCACAACCTCAAATAGCT...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGCTTGGAGTGAAGTGTTaGGATGATATGCCCATTTCA +
Preference number: 2 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLLGVKC*DDMPIS
Trigger: TGAAATGGGCATATCATCTCAACACTTCACTCCAAG...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp TCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGAAGAGGAGGCATCAACACTATTTCTaGTTGGCCTTTCCTGTTGTA +
Preference number: 2 (lower is better)
Translates to: SFATGLSANTCTERKKRRHQHYF*LAFPVV
Trigger: TACAACAGGAAAGGCCAATCAGAAATAGTGTTGATG...CCTCCTCTTCTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR-3UTR GCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACAGTGTTGAGATGATATaGCCATTTCATGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDSVEMI*PFHGEK
Trigger: CTTCTCCCCATGAAATGGGCATATCATCTCAACACT...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCCCCTCTTCCTTATTTaGAAATTCTCGCAATCAACT +
Preference number: 2 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDPLFLI*KFSQST
Trigger: AGTTGATTGCGAGAATTTTCAAATAAGGAAGAGGGG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR GCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATGAGATCTTGGCTCAATaGAATCTCCACCTCACAGGT +
Preference number: 2 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYEILAQ*NLHLTG
Trigger: ACCTGTGAGGTGGAGATTGCATTGAGCCAAGATCTC...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACGTGGTGGCTTTTCCATaGTATATAGTCAGATTCTTT +
Preference number: 2 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDVVAFP*YIVRFF
Trigger: AAAGAATCTGACTATATACCATGGAAAAGCCACCAC...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATAACAGGAAATGGTACTaGGACCATTTTTACTCCAGC +
Preference number: 2 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYNRKWY*DHFYSS
Trigger: GCTGGAGTAAAAATGGTCCCAGTACCATTTCCTGTT...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR CAA 90 bp GGTTGTGAACGCTTCTCCTTCCTTACAAGTGCAAAGCCTAACTCATaGAATGTGTGGATTACAAAACAAGAAAACATTAACTTATTGCAA +
Preference number: 2 (lower is better)
Translates to: GCERFSFLTSAKPNS*NVWITKQENINLLQ
Trigger: TTGCAATAAGTTAATGTTTTCTTGTTTTGTAATCCACACATTCAATGAGTTAGGCTTTGCACTTGTAAGGAAGGAGAAGCGTTCACAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR CCA 72 bp TCTTTCTACTTTCTTTTGAGTGGCAGCTGCTTTGGCTaGACGAGCCCGATAGCCACCTCCACTGATGGGCGG +
Preference number: 3 (lower is better)
Translates to: SFYFLLSGSCFG*TSPIATSTDGR
Trigger: CCGCCCATCAGTGGAGGTGGCTATCGGGCTCGTCCAGCCAAAGCAGCTGCCACTCAAAAGAAAGTAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR TCA 72 bp CTGGGAGCCTCTTCTCTCTTCTTGTCAAGGGGTCGATaGCCACGGGCACTGAAGAAACCAGCTATGAGACCT +
Preference number: 3 (lower is better)
Translates to: LGASSLFLSRGR*PRALKKPAMRP
Trigger: AGGTCTCATAGCTGGTTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAAGAAGAGAGAAGAGGCTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR TCA 72 bp ATTGGCCTTTCCTGTTGTAGCAAAGCCTCTTGCAACTaGCATCCTGTAGGACACAACACCCCCAGGTCTGGG +
Preference number: 3 (lower is better)
Translates to: IGLSCCSKASCN*HPVGHNTPRSG
Trigger: CCCAGACCTGGGGGTGTTGTGTCCTACAGGATGTCAGTTGCAAGAGGCTTTGCTACAACAGGAAAGGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR CCA 72 bp TGTGATGGCAAAGCGGTAGGTGAGTATGGGCTCCAGTaGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: CDGKAVGEYGLQ*DRTCGRETRSK
Trigger: TTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGAGCCCATACTCACCTACCGCTTTGCCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR TCA 72 bp CCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTaGACTCCCTGCCTGTCCGTTGGAACTCAGGATGTG +
Preference number: 3 (lower is better)
Translates to: PREIHFLSVKDT*TPCLSVGTQDV
Trigger: CACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR CCA 72 bp ATCTGTGAAGGACACTTGAACTCCCTGCCTGTCCGTTaGAACTCAGGATGTGCAAGGAACCAAGGCCTTTTA +
Preference number: 3 (lower is better)
Translates to: ICEGHLNSLPVR*NSGCARNQGLL
Trigger: TAAAAGGCCTTGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCTTCACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR TCA 72 bp AGGTTGCCCGTGGCGACTTGGAGTGAAGTGTTGAGATaGTATGCCCATTTCATGGGGAGAAGTAGAAAGAAC +
Preference number: 3 (lower is better)
Translates to: RLPVATWSEVLR*YAHFMGRSRKN
Trigger: GTTCTTTCTACTTCTCCCCATGAAATGGGCATATCATCTCAACACTTCACTCCAAGTCGCCACGGGCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CAA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTCACACTCACGTCTGCTaGAGAGTTTTAGAGGAATAT +
Preference number: 3 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPHTHVC*RVLEEY
Trigger: ATATTCCTCTAAAACTCTCAAGCAGACGTGAGTGTG...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CAA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCATGCAGATTGTCCTCTaGGAATCTCTGATCCTGATG +
Preference number: 3 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFMQIVL*ESLILM
Trigger: CATCAGGATCAGAGATTCCAAGAGGACAATCTGCAT...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATCCTAGGGTCATAAGGTaGCCCGTGGCGACTTGGAGT +
Preference number: 3 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYPRVIR*PVATWS
Trigger: ACTCCAAGTCGCCACGGGCAACCTTATGACCCTAGG...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CAA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATACCCCTCTTCCTTATTaGAAAATTCTCGCAATCAAC +
Preference number: 3 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDTPLPY*KILAIN
Trigger: GTTGATTGCGAGAATTTTCAAATAAGGAAGAGGGGT...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR-3UTR CAA 90 bp TACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAATCTTTCTACTTTCTTTaGAGTGGCAGCTGCTTTGGC +
Preference number: 3 (lower is better)
Translates to: YLLLPLLPQVFQQIHVLKSFYFL*SGSCFG
Trigger: GCCAAAGCAGCTGCCACTCAAAAGAAAGTAGAAAGA...TTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATACACTTGGTGAAGACTaGATGCAGATTGTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYTLGED*MQIVLL
Trigger: CAAGAGGACAATCTGCATCAAGTCTTCACCAAGTGT...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR TCA 72 bp GCTTCTCCTTCCTTACAAGTGCAAAGCCTAACTCATTaGATGTGTGGATTACAAAACAAGAAAACATTAACT +
Preference number: 3 (lower is better)
Translates to: ASPSLQVQSLTH*MCGLQNKKTLT
Trigger: AGTTAATGTTTTCTTGTTTTGTAATCCACACATTCAATGAGTTAGGCTTTGCACTTGTAAGGAAGGAGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTGATAGCCACCTCCACTaGTGGGCGGTGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPDSHLH*WAVGQA
Trigger: GGCCTGCCCCACCGCCCATCAGTGGAGGTGGCTATC...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp TTCTCTCTTCTTGTCAAGGGGTCGATGACCACGGGCACTGAAGAAACCAGCTATAGGTCTGGGTCAGCGTaGAGACAGCCTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: FSLLVKGSMTTGTEETSYRSGSA*RQPPAS
Trigger: TGATGCTGGAGGCTGTCTTCACGCTGACCCAGACCT...ATAGCTGGTTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAAGAAGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
3UTR CAA 72 bp AACCCTATGTCCCATTCACTGGCTCTGGGTCTCTTCTaGGACAAGGCGCCATCCCTGTTGGAATCAATAGGG +
Preference number: 4 (lower is better)
Translates to: NPMSHSLALGLF*DKAPSLLESIG
Trigger: CCCTATTGATTCCAACAGGGATGGCGCCTTGTCCAAGAAGAGACCCAGAGCCAGTGAATGGGACATAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GTCTGGGTCAGCGTGAAGACAGCCTCCAGCATCAGGGGCTTTTCTTTCTACTTTTTGTCAAGGGGTCGATaGCCACGGGCACTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VWVSVKTASSIRGFSFYFLSRGR*PRALKK
Trigger: TTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAA...AAAGTAGAAAGAAAAGCCCCTGATGCTGGAGGCTGTCTTCACGCTGACCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR TCA 90 bp TACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGATAGCCACCTCCACTaGTGGGCGGTGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: YLLLPLLPQVFQQIHVLKDSHLH*WAVGQA
Trigger: GGCCTGCCCCACCGCCCATCAGTGGAGGTGGCTATC...TTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR TCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTAGGTCTGGGTCAGCGTaGAGACAGCCTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPRSGSA*RQPPAS
Trigger: TGATGCTGGAGGCTGTCTTCACGCTGACCCAGACCT...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCACACCCCAGTAGTATCTaGCGTTTGGATTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RTLELPACPLELRMCKEPHPSSI*RLDWLH
Trigger: ATGCAGCCAATCCAAACGGCAGATACTACTGGGGTG...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCACTACACCATCATCTGTaGCATGCTTTGCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: RTLELPACPLELRMCKEPLHHHL*HALPCP
Trigger: GGGACATGGCAAAGCATGGCACAGATGATGGTGTAG...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTCAACACCCCCAGGTCTaGGTCAGCGTGAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPQHPQV*VSVKTA
Trigger: GGCTGTCTTCACGCTGACCCAGACCTGGGGGTGTTG...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACGAACTCCTGACCTTGTaGCCGCCCGCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDELLTL*PPASAS
Trigger: GGAGGCTGAGGCGGGCGGTCACAAGGTCAGGAGTTC...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGGGCAGCTGCTTTGGCTaGACGAGCCCGATAGCCACC +
Preference number: 4 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLGSCFG*TSPIAT
Trigger: GGTGGCTATCGGGCTCGTCCAGCCAAAGCAGCTGCC...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTTTGTCAAGGGGTCGATaGCCACGGGCACTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPLSRGR*PRALKK
Trigger: TTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAA...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GTCTGGGTCAGCGTGAAGACAGCCTCCAGCATCAGGGGCTTTTCTTTCTACTTTAAAGCCTCTTGCAACTaGCATCCTGTAGGACACAAC +
Preference number: 4 (lower is better)
Translates to: VWVSVKTASSIRGFSFYFKASCN*HPVGHN
Trigger: GTTGTGTCCTACAGGATGTCAGTTGCAAGAGGCTTT...AAAGTAGAAAGAAAAGCCCCTGATGCTGGAGGCTGTCTTCACGCTGACCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR TCA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTGGCAAAGCGGTAGGTaGGTATGGGCTCCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDWQSGR*VWAPVG
Trigger: TCCCACTGGAGCCCATACTCACCTACCGCTTTGCCA...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCCTTTTGAGTGGCAGCTaGTTTGGCTGGACGAGCCCG +
Preference number: 4 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFLLSGS*FGWTSP
Trigger: CGGGCTCGTCCAGCCAAAGCAGCTGCCACTCAAAAG...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp GCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGCTTTTGAGTGGCAGCTaGTTTGGCTGGACGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ASASFATGLSANTCTERKLLSGS*FGWTSP
Trigger: CGGGCTCGTCCAGCCAAAGCAGCTGCCACTCAAAAG...CTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR GCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTCGTATTGGGGACTATTaGTGTGGGAAGAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPRIGDY*CGKKGL
Trigger: CAGGCCCTTCTTCCCACAGCAATAGTCCCCAATACG...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp TACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGCAGCTGCTTTGGCTaGACGAGCCCGATAGCCACC +
Preference number: 4 (lower is better)
Translates to: YLLLPLLPQVFQQIHVLKGSCFG*TSPIAT
Trigger: GGTGGCTATCGGGCTCGTCCAGCCAAAGCAGCTGCC...TTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR CCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGGAGTGGCAGCTGCTTTaGCTGGACGAGCCCGATAGC +
Preference number: 4 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLEWQLL*LDEPDS
Trigger: GCTATCGGGCTCGTCCAGCCAAAGCAGCTGCCACTC...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp TCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGAAGAGGAGGCAACACCCCCAGGTCTaGGTCAGCGTGAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: SFATGLSANTCTERKKRRQHPQV*VSVKTA
Trigger: GGCTGTCTTCACGCTGACCCAGACCTGGGGGTGTTG...CCTCCTCTTCTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR CCA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCAGTAGTATCTGCCGTTTaGATTGGCTGCATGACATCT +
Preference number: 4 (lower is better)
Translates to: RTLELPACPLELRMCKEPVVSAV*IGCMTS
Trigger: AGATGTCATGCAGCCAATCCAAACGGCAGATACTAC...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTTCCCTGCCTGTCCGTTaGAACTCAGGATGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPSLPVR*NSGCAR
Trigger: CCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGA...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTTCTGTGAAGGACACTTaGACTCCCTGCCTGTCCGTT +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPSVKDT*TPCLSV
Trigger: AACGGACAGGCAGGGAGTTCAAGTGTCCTTCACAGA...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTTTGCCCAGGCTGGAGTaGAGTGTTGAGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPLPRLE*SVEILA
Trigger: AGCCAAGATCTCAACACTGCACTCCAGCCTGGGCAA...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCAAGTGTTGAGATGATATaGCCATTTCATGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RTLELPACPLELRMCKEPSVEMI*PFHGEK
Trigger: CTTCTCCCCATGAAATGGGCATATCATCTCAACACT...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp TTCTCTCTTCTTGTCAAGGGGTCGATGACCACGGGCACTGAAGAAACCAGCTATAGACCTTGGGCAAGTTaGTTTATCTGTGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: FSLLVKGSMTTGTEETSYRPWAS*FICAPV
Trigger: AACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCT...ATAGCTGGTTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAAGAAGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR CCA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCAAACAGGAAATGGTACTaGGACCATTTTTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTLELPACPLELRMCKEPNRKWY*DHFYSS
Trigger: GCTGGAGTAAAAATGGTCCCAGTACCATTTCCTGTT...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302068.9
3UTR CAA 72 bp ACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTaGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: TQRDSLLICEGH*NSLPVRWNSGC
Trigger: ACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCGATGACCACGGGCACTaGAGAAACCCTCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFDDHGH*RNPPHC
Trigger: ACAATGAGGAGGGTTTCTTCAGTGCCCGTGGTCATC...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCCAGGAATATTGCAACTaGCAGTGCATGGGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFQEYCN*QCMGCD
Trigger: GTCGCACCCCATGCACTGTCAGTTGCAATATTCCTG...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTCTCTGTCATACGTGCTaGAGAACATGCCGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPLCHTC*RTCRCE
Trigger: TTCACAACGGCATGTTCTTCAGCACGTATGACAGAG...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTCGTGGCGACTTGGAGTaGAGTGTTGAGATGATATGC +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPRGDLE*SVEMIC
Trigger: GCATATCATCTCAACACTTCACTCCAAGTCGCCACG...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTGAGATCTTGGCTCAATaGAATCTCCACCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPEILAQ*NLHLTG
Trigger: ACCTGTGAGGTGGAGATTGCATTGAGCCAAGATCTC...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTGCAACTGACAGTGCATaGGGTGCGACAATATTCCAT +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPATDSA*GATIFH
Trigger: ATGGAATATTGTCGCACCCCATGCACTGTCAGTTGC...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTAAGAACATGCCGTTGTaGATGGTCATGGTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPKNMPL*MVMVLF
Trigger: AAACAGGACCATGACCATTCACAACGGCATGTTCTT...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTTGCTTCTGCCTCTTTTaGCACAGGTCTTTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPCFCLF*HRSFSK
Trigger: TTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCA...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTCCCATCAGCTGAGATaGTCCATCCATGAGGGCATT +
Preference number: 4 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDSHQLR*SIHEGI
Trigger: AATGCCCTCATGGATGGAGCATCTCAGCTGATGGGA...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATATCTGTGCCATGCTTTaGCATGTCCCAGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDICAML*HVPGVL
Trigger: CAGTACACCTGGGACATGGCAAAGCATGGCACAGAT...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCATTGTCGTTGACACCTTaGGACTTAACTAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: RTLELPACPLELRMCKEPLSLTP*DLTRKT
Trigger: TGTTTTTCTAGTTAAGTCCCAAGGTGTCAACGACAA...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCTGGGGACTATTGCTGTaGGAAGAAGGGCCTGATCTT +
Preference number: 4 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFWGLLL*EEGPDL
Trigger: AAGATCAGGCCCTTCTTCCCACAGCAATAGTCCCCA...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCAGTGGTGGCTTTTCCATaGTATATAGTCAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: RTLELPACPLELRMCKEPVVAFP*YIVRFF
Trigger: AAAGAATCTGACTATATACCATGGAAAAGCCACCAC...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTGTTAAACACTTTGTATaGCAGATGCATCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPVKHFV*QMHPTA
Trigger: TGCTGTCGGATGCATCTGTCATACAAAGTGTTTAAC...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACGAGTATGGGCTCCAGTaGGACAGAACTTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDEYGLQ*DRTCGR
Trigger: TCTGCCACAAGTTCTGTCCCACTGGAGCCCATACTC...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATGTGCTTTTCCAGTTCTaGGGAGTACTCATTGACTAC +
Preference number: 4 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDVLFQF*GVLIDY
Trigger: GTAGTCAATGAGTACTCCTCAGAACTGGAAAAGCAC...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACGTGGGAAGAAGGGCCTaGTCTTCATACTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDVGRRA*SSYSSS
Trigger: GGAAGATGAGTATGAAGATCAGGCCCTTCTTCCCAC...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTCACACGAAGGTTAGTTaGGATATTGCTATTCACAGT +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPHTKVS*DIAIHS
Trigger: ACTGTGAATAGCAATATCCCAACTAACCTTCGTGTG...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTATCTGCCGTTTGGATTaGCTGCATGACATCTATTAT +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPICRLD*LHDIYY
Trigger: ATAATAGATGTCATGCAGCCAATCCAAACGGCAGAT...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACAAAGCCTCTTGCAACTaGCATCCTGTAGGACACAAC +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDKASCN*HPVGHN
Trigger: GTTGTGTCCTACAGGATGTCAGTTGCAAGAGGCTTT...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCAGGTTTTCCAGGATTaGACGAAGCACACGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDQVFQD*TKHTKV
Trigger: AACCTTCGTGTGCTTCGTTCAATCCTGGAAAACCTG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATGAGATGCTCCATCCATaGGGGCATTACCGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYEMLHP*GHYRLF
Trigger: GAACAGCCGGTAATGCCCTCATGGATGGAGCATCTC...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTCCCCTCTTCCTTATTTaGAAATTCTCGCAATCAACT +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPPLFLI*KFSQST
Trigger: AGTTGATTGCGAGAATTTTCAAATAAGGAAGAGGGG...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCACTTGGTGAAGACTTaGTGCAGATTGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDHLVKT*CRLSSW
Trigger: CCAAGAGGACAATCTGCATCAAGTCTTCACCAAGTG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGAGTGAAGTGTTGAGATaGTATGCCCATTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLSEVLR*YAHFMG
Trigger: CCCCATGAAATGGGCATATCATCTCAACACTTCACT...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp TCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGAAGAGGAGGTGCTTCTGCCTCTTTTaGCACAGGTCTTTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SFATGLSANTCTERKKRRCFCLF*HRSFSK
Trigger: TTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCA...CCTCCTCTTCTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR GCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTTTTCCTCACATTCTTTaGCAGACACCACAGGAATAT +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPFPHIL*QTPQEY
Trigger: ATATTCCTGTGGTGTCTGGCAAAGAATGTGAGGAAA...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGATGGATCCCATTTCCTaGCAAAGTCAACACTACCGT +
Preference number: 4 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLMDPIS*QSQHYR
Trigger: ACGGTAGTGTTGACTTTGGCAGGAAATGGGATCCAT...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTTTATTTTGGGTTAAATaGAGGTTGCTAAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPLFWVK*RLLSGE
Trigger: CTCTCCACTTAGCAACCTCCATTTAACCCAAAATAA...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTGTGCCAGTGATATCATaGGTGTATGCATATTTCCAA +
Preference number: 4 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPVPVIS*VYAYFQ
Trigger: TTGGAAATATGCATACACCCATGATATCACTGGCAC...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGCATCAACACTATTTCTaGTTGGCCTTTCCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: ASASFATGLSANTCTERKHQHYF*LAFPVV
Trigger: TACAACAGGAAAGGCCAATCAGAAATAGTGTTGATG...CTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR TCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGAGCAAATACATGTACTaGAAGGAAGAAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLSKYMY*KEEEEV
Trigger: GACCTCCTCTTCTTCCTTTCAGTACATGTATTTGCT...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCTTCATTCTGTACAGTaGATCCTCCATAGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDLHSVQ*ILHSEP
Trigger: AGGCTCACTATGGAGGATTCACTGTACAGAATGAAG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCCCATCTGTGTTGGTTaGAACATTTCCAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDPICVG*NISKSL
Trigger: CAGGGATTTGGAAATGTTGCAACCAACACAGATGGG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCGTTGTGAATGGTCATaGTCCTGTTTTCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDRCEWS*SCFLPS
Trigger: TGATGGGAGAAAACAGGACCATGACCATTCACAACG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCCAAAAATCTACGTATTaGGGACTATTGCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFQKSTY*GLLLWE
Trigger: TTCCCACAGCAATAGTCCCCAATACGTAGATTTTTG...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGGAAGGGAACAGGAAATaGTACTGGGACCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLEGNRK*YWDHFY
Trigger: GTAAAAATGGTCCCAGTACCATTTCCTGTTCCCTTC...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATCCCATTCACTGGCTCTaGGTCTCTTCTTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYPIHWL*VSSWTR
Trigger: CCTTGTCCAAGAAGAGACCCAGAGCCAGTGAATGGG...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp TACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAACCAGCTATGAGACCTTaGGCAAGTTGCTTTATCTGT +
Preference number: 4 (lower is better)
Translates to: YLLLPLLPQVFQQIHVLKPAMRP*ASCFIC
Trigger: ACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGG...TTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR TCA 90 bp TTACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGCAAATACATGTACTaGAAGGAAGAAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLASASFATGLSANTCTESKYMY*KEEEEV
Trigger: GACCTCCTCTTCTTCCTTTCAGTACATGTATTTGCT...TTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCTTGGAGTGAAGTGTTaGGATGATATGCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDLGVKC*DDMPIS
Trigger: TGAAATGGGCATATCATCTCAACACTTCACTCCAAG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACTCTTTTACTTGCTTCTaGCTCTTTTGCCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDSFTCF*LFCHRS
Trigger: AGACCTGTGGCAAAAGAGGCAGAAGCAAGTAAAAGA...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACGCCGTTTGGATTGGCTaGATGACATCTATTATACCA +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDAVWIG*MTSIIP
Trigger: TGGTATAATAGATGTCATGCAGCCAATCCAAACGGC...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp TACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAAAAGTTGCTTTATCTGTaGCCCAGTTTTCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: YLLLPLLPQVFQQIHVLKKLLYL*PSFLIS
Trigger: GGAGATGAGAAAACTGGGGCACAGATAAAGCAACTT...TTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR CCA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGTTTTCCTTTCCGTCATaGTTTTCCTACGACAAGGAT +
Preference number: 4 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLFSFPS*FSYDKD
Trigger: ATCCTTGTCGTAGGAAAACCATGACGGAAAGGAAAA...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCCAAGGCCTTTTATTTTaGGTTAAATGGAGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFQGLLF*VKWRLL
Trigger: TAGCAACCTCCATTTAACCCAAAATAAAAGGCCTTG...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACTCTTCCCATCTGTGTTaGTTGCAACATTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDSSHLC*LQHFQI
Trigger: GATTTGGAAATGTTGCAACCAACACAGATGGGAAGA...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCCCATCCTGGTAAGCTaGCTAATTTTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDPILVS*LILSFP
Trigger: TGGAAATGATAAAATTAGCCAGCTTACCAGGATGGG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp TCCAGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATCTGAGAATGACTGTATaGTCTAAGAAGAATATGTGT +
Preference number: 4 (lower is better)
Translates to: SSGTELVAEKPGQKLKLDLRMTV*SKKNMC
Trigger: ACACATATTCTTCTTAGACCATACAGTCATTCTCAG...ATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACCAAAGCCTAACTCATTaGATGTGTGGATTACAAAAC +
Preference number: 4 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDQSLTH*MCGLQN
Trigger: GTTTTGTAATCCACACATTCAATGAGTTAGGCTTTG...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATAGCTATTTGAGGTTGTaGACGCTTCTCCTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYSYLRL*TLLLPY
Trigger: GTAAGGAAGGAGAAGCGTTCACAACCTCAAATAGCT...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATAATAGGGCTCCAGCATaGCACATGTGCAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYNRAPA*HMCRIF
Trigger: AAAAATCCTGCACATGTGTCATGCTGGAGCCCTATT...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp TACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAATTGTCGTTGACACCTTaGGACTTAACTAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: YLLLPLLPQVFQQIHVLKLSLTP*DLTRKT
Trigger: TGTTTTTCTAGTTAAGTCCCAAGGTGTCAACGACAA...TTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR TCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATCATCAACACTATTTCTaGTTGGCCTTTCCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYHQHYF*LAFPVV
Trigger: TACAACAGGAAAGGCCAATCAGAAATAGTGTTGATG...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR TCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATATACTCTATACGGTTTaGCAGAACTGTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYILYTV*QNCQVE
Trigger: TTCAACCTGACAGTTCTGTCAAACCGTATAGAGTAT...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATGATATGCCCATTTCATaGGGAGAAGTAGAAAGAACA +
Preference number: 4 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYDMPIS*GEVERT
Trigger: TGTTCTTTCTACTTCTCCCCATGAAATGGGCATATC...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR GCA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATGCAACAGGCATATTCTaGTCCCTATTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYATGIF*SLFHYF
Trigger: GAAATAATGAAATAGGGAGCAGAATATGCCTGTTGC...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GTCTGGGTCAGCGTGAAGACAGCCTCCAGCATCAGGGGCTTTTCTTTCTACTTTGAGACCTTGGGCAAGTaGCTTTATCTGTGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: VWVSVKTASSIRGFSFYFETLGK*LYLCPS
Trigger: ACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTC...AAAGTAGAAAGAAAAGCCCCTGATGCTGGAGGCTGTCTTCACGCTGACCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS GCA 90 bp CCCCTTCCAATTCATCCATACTACACCATCATCTGTGCCATGCTTTaGCATGTCCCAGGTGTACTGTCCACCCCAGTAGTATCTGCCGTT +
Preference number: 5 (lower is better)
Translates to: PLPIHPYYTIICAML*HVPGVLSTPVVSAV
Trigger: AACGGCAGATACTACTGGGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAGATGATGGTGTAGTATGGATGAATTGGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS-3UTR CAA 90 bp AGGACACTTGAACTCCCTGCCTGTCCGTTGGAACTCAGGATGTGCAAGGAACCATCAGGTTTTCCAGGATaGAACGAAGCACACGAAGGT +
Preference number: 5 (lower is better)
Translates to: RTLELPACPLELRMCKEPSGFPG*NEAHEG
Trigger: ACCTTCGTGTGCTTCGTTCAATCCTGGAAAACCTGA...TGGTTCCTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAGTTCAAGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS GCA 90 bp GCCGTTGTGAATGGTCATGGTCCTGTTTTCTCCCATCAGCTGAGATaGTCCATCCATGAGGGCATTACCGGCTGTTCCTCTGTATTTGTT +
Preference number: 5 (lower is better)
Translates to: AVVNGHGPVFSHQLR*SIHEGITGCSSVFV
Trigger: AACAAATACAGAGGAACAGCCGGTAATGCCCTCATGGATGGAGCATCTCAGCTGATGGGAGAAAACAGGACCATGACCATTCACAACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS-3UTR CAA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTCATCTGTGCCATGCTTaGCCATGTCCCAGGTGTACT +
Preference number: 5 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPHLCHA*PCPRCT
Trigger: AGTACACCTGGGACATGGCAAAGCATGGCACAGATG...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GTCTGGGTCAGCGTGAAGACAGCCTCCAGCATCAGGGGCTTTTCTTTCTACTTTTTTCTCATCTCCTCATaGTCGTTGACACCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: VWVSVKTASSIRGFSFYFFLISS*SLTPWD
Trigger: GTCCCAAGGTGTCAACGACAATGAGGAGATGAGAAA...AAAGTAGAAAGAAAAGCCCCTGATGCTGGAGGCTGTCTTCACGCTGACCCAGAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS TCA 90 bp TGGTCATGGTCCTGTTTTCTCCCATCAGCTGAGATGCTCCATCCATaGGGGCATTACCGGCTGTTCCTCTGTATTTGTTCACTGAGATCT +
Preference number: 5 (lower is better)
Translates to: WSWSCFLPSAEMLHP*GHYRLFLCICSLRS
Trigger: AGATCTCAGTGAACAAATACAGAGGAACAGCCGGTAATGCCCTCATGGATGGAGCATCTCAGCTGATGGGAGAAAACAGGACCATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS TCA 90 bp GCTCGGCTACTTGTAGGTCTTGACCGTAGGGTTGACTTACAGCTATaGGACCTTGGGCAAGTTGCTTTATCTGTGCCCCAGTTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: ARLLVGLDRRVDLQL*DLGQVALSVPQFSH
Trigger: ATGAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGTAAGTCAACCCTACGGTCAAGACCTACAAGTAGCCGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS GCA 90 bp GGGTTGACTTACAGCTATGAGACCTTGGGCAAGTTGCTTTATCTGTaGCCCAGTTTTCTCATCTCCTCATTGTCGTTGACACCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: GLTYSYETLGKLLYL*PSFLISSLSLTPWD
Trigger: GTCCCAAGGTGTCAACGACAATGAGGAGATGAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGTAAGTCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS-3UTR CAA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTACGTATTGGGGACTATaGCTGTGGGAAGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPTYWGL*LWEEGP
Trigger: AGGCCCTTCTTCCCACAGCAATAGTCCCCAATACGT...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCAAGGCGCCATCCCTGTaGGAATCAATAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFKAPSL*ESIGLQ
Trigger: CTGGAGCCCTATTGATTCCAACAGGGATGGCGCCTT...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GTCTGGGTCAGCGTGAAGACAGCCTCCAGCATCAGGGGCTTTTCTTTCTACTTTATCTCCTCATTGTCGTaGACACCTTGGGACTTAACT +
Preference number: 5 (lower is better)
Translates to: VWVSVKTASSIRGFSFYFISSLS*TPWDLT
Trigger: AGTTAAGTCCCAAGGTGTCAACGACAATGAGGAGAT...AAAGTAGAAAGAAAAGCCCCTGATGCTGGAGGCTGTCTTCACGCTGACCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS TCA 90 bp TGGGATCTGATGTTAACCAGCCGTCATTGTCTCTGTCATACGTGCTaGAGAACATGCCGTTGTGAATGGTCATGGTCCTGTTTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: WDLMLTSRHCLCHTC*RTCRCEWSWSCFLP
Trigger: TGGGAGAAAACAGGACCATGACCATTCACAACGGCATGTTCTTCAGCACGTATGACAGAGACAATGACGGCTGGTTAACATCAGATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS GCA 90 bp ACTGAAGAAACCAGCTATGAGACCTTGGGCAAGTTGCTTTATCTGTaGCCCAGTTTTCTCATCTCCTCATTGTCGTTGACACCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: TEETSYETLGKLLYL*PSFLISSLSLTPWD
Trigger: GTCCCAAGGTGTCAACGACAATGAGGAGATGAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGGTTTCTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR CAA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTAGTAGTATCTGCCGTTaGGATTGGCTGCATGACATC +
Preference number: 5 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPSSICR*DWLHDI
Trigger: GATGTCATGCAGCCAATCCAAACGGCAGATACTACT...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCAAGAAACCCTCCTCATaGTCGTTGACACCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFKKPSS*SLTPWD
Trigger: GTCCCAAGGTGTCAACGACAATGAGGAGGGTTTCTT...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp CCAACCCAGAGAGATTCACTTCTTATCTGTGAAGGACACTTGAACTCCCTGCCTGCAAAAATCTACGTATaGGGGACTATTGCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: PTQRDSLLICEGHLNSLPAKIYV*GTIAVG
Trigger: TCCCACAGCAATAGTCCCCAATACGTAGATTTTTGC...AGGCAGGGAGTTCAAGTGTCCTTCACAGATAAGAAGTGAATCTCTCTGGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS TCA 90 bp TCCATCCATGAGGGCATTACCGGCTGTTCCTCTGTATTTGTTCACTaGGATCTGGTATTTGTTGGCTTCATTCTGTACAGTGAATCCTCC +
Preference number: 5 (lower is better)
Translates to: SIHEGITGCSSVFVH*DLVFVGFILYSESS
Trigger: GGAGGATTCACTGTACAGAATGAAGCCAACAAATACCAGATCTCAGTGAACAAATACAGAGGAACAGCCGGTAATGCCCTCATGGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS-3UTR CAA 90 bp TTCTCTCTTCTTGTCAAGGGGTCGATGACCACGGGCACTGAAGAAACCAGCTATTTCATGGTTTTAAGTTaGTGGAAGCTCCAAGAAACC +
Preference number: 5 (lower is better)
Translates to: FSLLVKGSMTTGTEETSYFMVLS*WKLQET
Trigger: GGTTTCTTGGAGCTTCCACAAACTTAAAACCATGAA...ATAGCTGGTTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAAGAAGAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS-3UTR CAA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCGTCAACACTACCGTCTaGACGGTTCTGAATCACTGT +
Preference number: 5 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFVNTTV*TVLNHC
Trigger: ACAGTGATTCAGAACCGTCAAGACGGTAGTGTTGAC...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTATTTCTCTTTCTACTTTCTTTaGAGTGGCAGCTGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: DKNRPRFYGQQAYSAPYFSFYFL*SGSCFG
Trigger: GCCAAAGCAGCTGCCACTCAAAAGAAAGTAGAAAGA...GAAATAGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACGACACCACAGGAATATaGCAACTGACAGTGCATGGG +
Preference number: 5 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDDTTGI*QLTVHG
Trigger: CCCATGCACTGTCAGTTGCAATATTCCTGTGGTGTC...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACGTTAACCAGCCGTCATaGTCTCTGTCATACGTGCTG +
Preference number: 5 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDVNQPS*SLSYVL
Trigger: CAGCACGTATGACAGAGACAATGACGGCTGGTTAAC...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATCTCCCTGCCTGTCCGTaGGAACTCAGGATGTGCAAG +
Preference number: 5 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYLPACP*ELRMCK
Trigger: CTTGCACATCCTGAGTTCCAACGGACAGGCAGGGAG...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS CCA 90 bp TCCTCCATTTCTATCAAAAGTTCTGTGGGTCCCATCCTGGTAAGCTaGCTAATTTTATCATTTCCAAGCCAATATTCACCTGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SSISIKSSVGPILVS*LILSFPSQYSPGRP
Trigger: TGGCCTACCAGGTGAATATTGGCTTGGAAATGATAAAATTAGCCAGCTTACCAGGATGGGACCCACAGAACTTTTGATAGAAATGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS-3UTR CAA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTAGGTTAGTTGGGATATaGCTATTCACAGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPRLVGI*LFTVSS
Trigger: AGATGAGACTGTGAATAGCAATATCCCAACTAACCT...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp TTGAGGACAAGAATAGACCTCGTTTCTATGGGCAACAGGCATATTCTGCTCCCTACTGAGATCTGGTATTaGTTGGCTTCATTCTGTACA +
Preference number: 5 (lower is better)
Translates to: LRTRIDLVSMGNRHILLPTEIWY*LASFCT
Trigger: TGTACAGAATGAAGCCAACAAATACCAGATCTCAGT...AGGGAGCAGAATATGCCTGTTGCCCATAGAAACGAGGTCTATTCTTGTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGATGCAGATTGTCCTCTaGGAATCTCTGATCCTGATG +
Preference number: 5 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLMQIVL*ESLILM
Trigger: CATCAGGATCAGAGATTCCAAGAGGACAATCTGCAT...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGACACTTGGTGAAGACTaGATGCAGATTGTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLTLGED*MQIVLL
Trigger: CAAGAGGACAATCTGCATCAAGTCTTCACCAAGTGT...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp TTACTTGCTTCTGCCTCTTTTGCCACAGGTCTTTCAGCAAATACATGTACTGAAACCAGCTATGAGACCTaGGGCAAGTTGCTTTATCTG +
Preference number: 5 (lower is better)
Translates to: LLASASFATGLSANTCTETSYET*GKLLYL
Trigger: CAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGGT...TTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS GCA 90 bp TGTTGTCACATACAGAAGAGCAAAAATCTACGTATTGGGGACTATTaGTGTGGGAAGAAGGGCCTGATCTTCATACTCATCTTCCTCATT +
Preference number: 5 (lower is better)
Translates to: CCHIQKSKNLRIGDY*CGKKGLIFILIFLI
Trigger: AATGAGGAAGATGAGTATGAAGATCAGGCCCTTCTTCCCACAGCAATAGTCCCCAATACGTAGATTTTTGCTCTTCTGTATGTGACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS-3UTR CAA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACTCCCATCTGTGTTGGTaGCAACATTTCCAAATCCCT +
Preference number: 5 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDSHLCW*QHFQIP
Trigger: AGGGATTTGGAAATGTTGCAACCAACACAGATGGGA...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS TCA 90 bp ATTTGTTCACTGAGATCTGGTATTTGTTGGCTTCATTCTGTACAGTaGATCCTCCATAGTGAGCCTTTACTTTGTCTCCTTTCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: ICSLRSGICWLHSVQ*ILHSEPLLCLLSSP
Trigger: AGGACTGGAAAGGAGACAAAGTAAAGGCTCACTATGGAGGATTCACTGTACAGAATGAAGCCAACAAATACCAGATCTCAGTGAACAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATCCCTCCTCATTGTCGTaGACACCTTGGGACTTAACT +
Preference number: 5 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYPSSLS*TPWDLT
Trigger: AGTTAAGTCCCAAGGTGTCAACGACAATGAGGAGGG...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACATTTCCTCACATTCTTaGCCAGACACCACAGGAATA +
Preference number: 5 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDISSHS*PDTTGI
Trigger: TATTCCTGTGGTGTCTGGCAAAGAATGTGAGGAAAT...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp ACAATAAGTACCATAAAAATGGGTGGCAATGATGATACATTAGGGGTGGAGGACGCTGTTCCTCTGTATTaGTTCACTGAGATCTGGTAT +
Preference number: 5 (lower is better)
Translates to: TISTIKMGGNDDTLGVEDAVPLY*FTEIWY
Trigger: ATACCAGATCTCAGTGAACAAATACAGAGGAACAGC...GTCCTCCACCCCTAATGTATCATCATTGCCACCCATTTTTATGGTACTTATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp AGTGGGACAGAACTTGTGGCAGAGAAACCAGGTCAAAAGTTAAAGTTGGATTTGTCTAACTTTTGTATTTaGCTTCTCAGGTTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SGTELVAEKPGQKLKLDLSNFCI*LLRFSR
Trigger: CCTGGAAAACCTGAGAAGCAAAATACAAAAGTTAGA...CAAATCCAACTTTAACTTTTGACCTGGTTTCTCTGCCACAAGTTCTGTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATTACTCATCTTCCTCATaGAGTACCATGACCCCTTCC +
Preference number: 5 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYYSSSS*STMTPS
Trigger: GGAAGGGGTCATGGTACTCAATGAGGAAGATGAGTA...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATGAGATCTGGTATTTGTaGGCTTCATTCTGTACAGTG +
Preference number: 5 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYEIWYL*ASFCTV
Trigger: CACTGTACAGAATGAAGCCAACAAATACCAGATCTC...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATCACACTCACGTCTGCTaGAGAGTTTTAGAGGAATAT +
Preference number: 5 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYHTHVC*RVLEEY
Trigger: ATATTCCTCTAAAACTCTCAAGCAGACGTGAGTGTG...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS TCA 90 bp TTCATGTCACAGTATACTCTATACGGTTTGACAGAACTGTCAGGTTaGATGAGATACATTTCAGATGTTTCACCTCCTTTCCTGATAATT +
Preference number: 5 (lower is better)
Translates to: FMSQYTLYGLTELSG*MRYISDVSPPFLII
Trigger: AATTATCAGGAAAGGAGGTGAAACATCTGAAATGTATCTCATTCAACCTGACAGTTCTGTCAAACCGTATAGAGTATACTGTGACATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATTTCATGGTTTTAAGTTaGTGGAAGCTCCAAGAAACC +
Preference number: 5 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYFMVLS*WKLQET
Trigger: GGTTTCTTGGAGCTTCCACAAACTTAAAACCATGAA...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS-3UTR CAA 90 bp GTGCCAGTGATATCATGGGTGTATGCATATTTCCAAAATCATGAAATCGTATATACCCCTCTTCCTTATTaGAAAATTCTCGCAATCAAC +
Preference number: 5 (lower is better)
Translates to: VPVISWVYAYFQNHEIVYTPLPY*KILAIN
Trigger: GTTGATTGCGAGAATTTTCAAATAAGGAAGAGGGGT...ATATACGATTTCATGATTTTGGAAATATGCATACACCCATGATATCACTGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302068.9
CDS CCA 90 bp AGGTTAGTTGGGATATTGCTATTCACAGTCTCATCTATATATAATTaGTGCTTTTCCAGTTCTGAGGAGTACTCATTGACTACATTTTCA +
Preference number: 5 (lower is better)
Translates to: RLVGILLFTVSSIYN*CFSSSEEYSLTTFS
Trigger: TGAAAATGTAGTCAATGAGTACTCCTCAGAACTGGAAAAGCACCAATTATATATAGATGAGACTGTGAATAGCAATATCCCAACTAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302068.9
ENST00000473984.1
ENST00000502545.5
ENST00000509493.1
CDS TCA 72 bp CTGGGAGCCTCTTCTCTCTTCTTGTCAAGGGGTCGATaGCCACGGGCACTGAAGAAACCCTCCTCATTGTCG +
Preference number: 6 (lower is better)
Translates to: LGASSLFLSRGR*PRALKKPSSLS
Trigger: CGACAATGAGGAGGGTTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAAGAAGAGAGAAGAGGCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000497097.5
ENST00000502545.5
CDS CAA 90 bp ACCCCTTCCAATTCATCCATACTACACCATCATCTGTGCCATGCTTaGCCATGTCCCAGGTGTACTGTCCACCCCAGTAGTATCTGCCGT +
Preference number: 6 (lower is better)
Translates to: TPSNSSILHHHLCHA*PCPRCTVHPSSICR
Trigger: ACGGCAGATACTACTGGGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAGATGATGGTGTAGTATGGATGAATTGGAAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS GCA 72 bp AATGGTCATGGTCCTGTTTTCTCCCATCAGCTGAGATaGTCCATCCATGAGGGCATTACCGGCTGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: NGHGPVFSHQLR*SIHEGITGCSS
Trigger: AGAGGAACAGCCGGTAATGCCCTCATGGATGGAGCATCTCAGCTGATGGGAGAAAACAGGACCATGACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS TCA 72 bp CTTGTAGGTCTTGACCGTAGGGTTGACTTACAGCTATaGGACCTTGGGCAAGTTGCTTTATCTGTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: LVGLDRRVDLQL*DLGQVALSVPQ
Trigger: CTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGTAAGTCAACCCTACGGTCAAGACCTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS GCA 72 bp CCATGTCCCAGGTGTACTGTCCACCCCAGTAGTATCTaGCGTTTGGATTGGCTGCATGACATCTATTATACC +
Preference number: 6 (lower is better)
Translates to: PCPRCTVHPSSI*RLDWLHDIYYT
Trigger: GGTATAATAGATGTCATGCAGCCAATCCAAACGGCAGATACTACTGGGGTGGACAGTACACCTGGGACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS CAA 72 bp ATGACCACGGGCACTGAAGAAACCAGCTATGAGACCTaGGGCAAGTTGCTTTATCTGTGCCCCAGTTTTCTC +
Preference number: 6 (lower is better)
Translates to: MTTGTEETSYET*GKLLYLCPSFL
Trigger: GAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGGTTTCTTCAGTGCCCGTGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS TCA 72 bp TCCTGTTTTCTCCCATCAGCTGAGATGCTCCATCCATaGGGGCATTACCGGCTGTTCCTCTGTATTTGTTCA +
Preference number: 6 (lower is better)
Translates to: SCFLPSAEMLHP*GHYRLFLCICS
Trigger: TGAACAAATACAGAGGAACAGCCGGTAATGCCCTCATGGATGGAGCATCTCAGCTGATGGGAGAAAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS GCA 72 bp ATTCATCCATACTACACCATCATCTGTGCCATGCTTTaGCATGTCCCAGGTGTACTGTCCACCCCAGTAGTA +
Preference number: 6 (lower is better)
Translates to: IHPYYTIICAML*HVPGVLSTPVV
Trigger: TACTACTGGGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAGATGATGGTGTAGTATGGATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS CAA 72 bp AATTCATCCATACTACACCATCATCTGTGCCATGCTTaGCCATGTCCCAGGTGTACTGTCCACCCCAGTAGT +
Preference number: 6 (lower is better)
Translates to: NSSILHHHLCHA*PCPRCTVHPSS
Trigger: ACTACTGGGGTGGACAGTACACCTGGGACATGGCAAAGCATGGCACAGATGATGGTGTAGTATGGATGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS CAA 72 bp GTCTTGACCGTAGGGTTGACTTACAGCTATGAGACCTaGGGCAAGTTGCTTTATCTGTGCCCCAGTTTTCTC +
Preference number: 6 (lower is better)
Translates to: VLTVGLTYSYET*GKLLYLCPSFL
Trigger: GAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGTAAGTCAACCCTACGGTCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS CAA 90 bp GTCTTGACCGTAGGGTTGACTTACAGCTATGAGACCTTGGGCAAGTaGCTTTATCTGTGCCCCAGTTTTCTCATCTCCTCATTGTCGTTG +
Preference number: 6 (lower is better)
Translates to: VLTVGLTYSYETLGK*LYLCPSFLISSLSL
Trigger: CAACGACAATGAGGAGATGAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGTAAGTCAACCCTACGGTCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS TCA 72 bp ATGTTAACCAGCCGTCATTGTCTCTGTCATACGTGCTaGAGAACATGCCGTTGTGAATGGTCATGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: MLTSRHCLCHTC*RTCRCEWSWSC
Trigger: ACAGGACCATGACCATTCACAACGGCATGTTCTTCAGCACGTATGACAGAGACAATGACGGCTGGTTAACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS GCA 72 bp ACCAGCTATGAGACCTTGGGCAAGTTGCTTTATCTGTaGCCCAGTTTTCTCATCTCCTCATTGTCGTTGACA +
Preference number: 6 (lower is better)
Translates to: TSYETLGKLLYL*PSFLISSLSLT
Trigger: TGTCAACGACAATGAGGAGATGAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS GCA 72 bp GCACTGAAGAAACCAGCTATGAGACCTTGGGCAAGTTaGTTTATCTGTGCCCCAGTTTTCTCATCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: ALKKPAMRPWAS*FICAPVFSSPH
Trigger: ATGAGGAGATGAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGGTTTCTTCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425838.5
CDS CAA 72 bp TGGATCCCATTTCCTGCCAAAGTCAACACTACCGTCTaGACGGTTCTGAATCACTGTCCATCCTCCATTTTC +
Preference number: 6 (lower is better)
Translates to: WIPFPAKVNTTV*TVLNHCPSSIF
Trigger: GAAAATGGAGGATGGACAGTGATTCAGAACCGTCAAGACGGTAGTGTTGACTTTGGCAGGAAATGGGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS CAA 72 bp GTAGGGTTGACTTACAGCTATGAGACCTTGGGCAAGTaGCTTTATCTGTGCCCCAGTTTTCTCATCTCCTCA +
Preference number: 6 (lower is better)
Translates to: VGLTYSYETLGK*LYLCPSFLISS
Trigger: TGAGGAGATGAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGTAAGTCAACCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS TCA 72 bp TACGTATTGGGGACTATTGCTGTGGGAAGAAGGGCCTaGTCTTCATACTCATCTTCCTCATTGAGTACCATG +
Preference number: 6 (lower is better)
Translates to: YVLGTIAVGRRA*SSYSSSSLSTM
Trigger: CATGGTACTCAATGAGGAAGATGAGTATGAAGATCAGGCCCTTCTTCCCACAGCAATAGTCCCCAATACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS GCA 72 bp TACAGCTATGAGACCTTGGGCAAGTTGCTTTATCTGTaGCCCAGTTTTCTCATCTCCTCATTGTCGTTGACA +
Preference number: 6 (lower is better)
Translates to: YSYETLGKLLYL*PSFLISSLSLT
Trigger: TGTCAACGACAATGAGGAGATGAGAAAACTGGGGCACAGATAAAGCAACTTGCCCAAGGTCTCATAGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS CAA 72 bp CCATCCATGAGGGCATTACCGGCTGTTCCTCTGTATTaGTTCACTGAGATCTGGTATTTGTTGGCTTCATTC +
Preference number: 6 (lower is better)
Translates to: PSMRALPAVPLY*FTEIWYLLASF
Trigger: GAATGAAGCCAACAAATACCAGATCTCAGTGAACAAATACAGAGGAACAGCCGGTAATGCCCTCATGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS CAA 90 bp GATGTTAACCTGGTAGGCCACAGTAATTCTTCCCATCTGTGTTGGTaGCAACATTTCCAAATCCCTGTTTATATGGATCCCATTTCCTGC +
Preference number: 6 (lower is better)
Translates to: DVNLVGHSNSSHLCW*QHFQIPVYMDPISC
Trigger: GCAGGAAATGGGATCCATATAAACAGGGATTTGGAAATGTTGCAACCAACACAGATGGGAAGAATTACTGTGGCCTACCAGGTTAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502545.5
CDS GCA 72 bp ATACAGAAGAGCAAAAATCTACGTATTGGGGACTATTaGTGTGGGAAGAAGGGCCTGATCTTCATACTCATC +
Preference number: 6 (lower is better)
Translates to: IQKSKNLRIGDY*CGKKGLIFILI
Trigger: GATGAGTATGAAGATCAGGCCCTTCTTCCCACAGCAATAGTCCCCAATACGTAGATTTTTGCTCTTCTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS GCA 72 bp ATCAACTGGCTGGTTGGTGATAGTGAATCTGTAGGTTaGTTACTGTTCAGTAACAGTAGAAAGACCAACTGC +
Preference number: 6 (lower is better)
Translates to: INWLVGDSESVG*LLFSNSRKTNC
Trigger: GCAGTTGGTCTTTCTACTGTTACTGAACAGTAAGCAACCTACAGATTCACTATCACCAACCAGCCAGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS CAA 72 bp CATACAGAAGAGCAAAAATCTACGTATTGGGGACTATaGCTGTGGGAAGAAGGGCCTGATCTTCATACTCAT +
Preference number: 6 (lower is better)
Translates to: HTEEQKSTYWGL*LWEEGPDLHTH
Trigger: ATGAGTATGAAGATCAGGCCCTTCTTCCCACAGCAATAGTCCCCAATACGTAGATTTTTGCTCTTCTGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS CAA 90 bp AATATTCACCTGGTAGGCCACAGTAATTCTTCCCATCTGTGTTGGTaGCAACATTTCCAAATCCCTGTTTATATGGATCCCATTTCCTGC +
Preference number: 6 (lower is better)
Translates to: NIHLVGHSNSSHLCW*QHFQIPVYMDPISC
Trigger: GCAGGAAATGGGATCCATATAAACAGGGATTTGGAAATGTTGCAACCAACACAGATGGGAAGAATTACTGTGGCCTACCAGGTGAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS CAA 90 bp ATGTTGTCACATACAGAAGAGCAAAAATCTACGTATTGGGGACTATaGCTGTGGGAAGAAGGGCCTGATCTTCATACTCATCTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: MLSHTEEQKSTYWGL*LWEEGPDLHTHLPH
Trigger: ATGAGGAAGATGAGTATGAAGATCAGGCCCTTCTTCCCACAGCAATAGTCCCCAATACGTAGATTTTTGCTCTTCTGTATGTGACAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1
CDS TCA 72 bp CTGAGATCTGGTATTTGTTGGCTTCATTCTGTACAGTaGATCCTCCATAGTGAGCCTTTACTTTGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: LRSGICWLHSVQ*ILHSEPLLCLL
Trigger: AAGGAGACAAAGTAAAGGCTCACTATGGAGGATTCACTGTACAGAATGAAGCCAACAAATACCAGATCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302068.9
ENST00000509493.1
CDS CCA 72 bp GCACTGAAGAAACCCTCCTCATTGTCGTTGACACCTTaGGACTTAACTAGAAAAACACACAATAGTAGCAAT +
Preference number: 6 (lower is better)
Translates to: ALKKPSSLSLTP*DLTRKTHNSSN
Trigger: ATTGCTACTATTGTGTGTTTTTCTAGTTAAGTCCCAAGGTGTCAACGACAATGAGGAGGGTTTCTTCAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000497097.5
ENST00000502545.5
CDS CAA 90 bp ATGGAAAGCACAAGGATATCTACCTTTTACTTGCTTCTGCCTCTTTaGCCACAGGTCTTTCAGCAAATACATGTACTGAAAGGAAGAAGA +
Preference number: 6 (lower is better)
Translates to: MESTRISTFYLLLPL*PQVFQQIHVLKGRR
Trigger: TCTTCTTCCTTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTAAAAGGTAGATATCCTTGTGCTTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497097.5
CDS CAA 90 bp AGGTTTTCCAGGATTGAACGAAGCACACGAAGGTTAGTTGGGATATaGCTATTCACAGTCTCATCTATATATAATTGGTGCTTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: RFSRIERSTRRLVGI*LFTVSSIYNWCFSS
Trigger: ACTGGAAAAGCACCAATTATATATAGATGAGACTGTGAATAGCAATATCCCAACTAACCTTCGTGTGCTTCGTTCAATCCTGGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302068.9
ENST00000473984.1
ENST00000502545.5
ENST00000509493.1
CDS CCA 72 bp ATCACAAGCTTGATAATTTGCTTAAGATCCATCAACTaGCTGGTTGGTGATAGTGAATCTGTAGGTTGCTTA +
Preference number: 6 (lower is better)
Translates to: ITSLIICLRSIN*LVGDSESVGCL
Trigger: TAAGCAACCTACAGATTCACTATCACCAACCAGCCAGTTGATGGATCTTAAGCAAATTATCAAGCTTGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498375.2
CDS CAA 72 bp AGGATTGAACGAAGCACACGAAGGTTAGTTGGGATATaGCTATTCACAGTCTCATCTATATATAATTGGTGC +
Preference number: 6 (lower is better)
Translates to: RIERSTRRLVGI*LFTVSSIYNWC
Trigger: GCACCAATTATATATAGATGAGACTGTGAATAGCAATATCCCAACTAACCTTCGTGTGCTTCGTTCAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302068.9
ENST00000473984.1
ENST00000502545.5
ENST00000509493.1
CDS CAA 72 bp ACAAGGATATCTACCTTTTACTTGCTTCTGCCTCTTTaGCCACAGGTCTTTCAGCAAATACATGTACTGAAA +
Preference number: 6 (lower is better)
Translates to: TRISTFYLLLPL*PQVFQQIHVLK
Trigger: TTTCAGTACATGTATTTGCTGAAAGACCTGTGGCAAAAGAGGCAGAAGCAAGTAAAAGGTAGATATCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497097.5
CDS CAA 90 bp ATTCATGTCACAGTATACTCTATACGGTTTGACAGAACTGTCAGGTaGAATGAGATACATTTCAGATGTTTCACCTCCTTTCCTGATAAT +
Preference number: 6 (lower is better)
Translates to: IHVTVYSIRFDRTVR*NEIHFRCFTSFPDN
Trigger: ATTATCAGGAAAGGAGGTGAAACATCTGAAATGTATCTCATTCAACCTGACAGTTCTGTCAAACCGTATAGAGTATACTGTGACATGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302068.9
ENST00000502545.5
ENST00000509493.1