RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FFAR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000186188

Ensembl transcript IDs: ENST00000371481.9, ENST00000371483.8, ENST00000604414.1

Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGGAGTaGCCCTGGGTTCGGTCTTTGGCTCTGGTTTCTCTCTATCTCTCC +
Preference number: 1 (lower is better)
Translates to: AAVHSSHWPSLQVVE*PWVRSLALVSLYLS
Trigger: GGAGAGATAGAGAGAAACCAGAGCCAAAGACCGAACCCAGGGTCACTCCACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 90 bp AAAGATTTGTTGAACACCTACTATACACCAGGCCCCGTGCTGCTGTaGATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGGAGTGACCCT +
Preference number: 1 (lower is better)
Translates to: KDLLNTYYTPGPVLL*IPATGPASKWWSDP
Trigger: AGGGTCACTCCACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGTGTATAGTAGGTGTTCAACAAATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 90 bp GGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGTCTaGCATGGCTGGTGCTTAAGAGGCATCTCTGCTGGATGCGTCAGG +
Preference number: 1 (lower is better)
Translates to: GCLVHHCIPSTKDTV*HGWCLRGISAGCVR
Trigger: CCTGACGCATCCAGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 90 bp ATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTAATCTTTaGACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCTCC +
Preference number: 1 (lower is better)
Translates to: MLLRVYSLPSSQGNL*THSSGHVSLQLPTS
Trigger: GGAGGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 90 bp GCCACTCACCTCCAAGGTCCCATCCCCATGTCACACTTCAGCAGCTaGCCAACTGGTCTCCATTTTCACTCATGCTCCTCAGAGTCTATT +
Preference number: 1 (lower is better)
Translates to: ATHLQGPIPMSHFSS*PTGLHFHSCSSESI
Trigger: AATAGACTCTGAGGAGCATGAGTGAAAATGGAGACCAGTTGGGCAGCTGCTGAAGTGTGACATGGGGATGGGACCTTGGAGGTGAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR TCA 90 bp AGGGCACAGGGTGGCTGTGACCCTTCAGAGGAGAAATCTGCGTCCTaGATCGGTTCTAAGACTCACTTCAGAAACCACTATGGTGTGGCT +
Preference number: 1 (lower is better)
Translates to: RAQGGCDPSEEKSAS*IGSKTHFRNHYGVA
Trigger: AGCCACACCATAGTGGTTTCTGAAGTGAGTCTTAGAACCGATTCAGGACGCAGATTTCTCCTCTGAAGGGTCACAGCCACCCTGTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 90 bp CACCACTGTATTCCTAGCACAAAGGACACTGTCTGCCATGGCTGGTaGTTAAGAGGCATCTCTGCTGGATGCGTCAGGAGTAAACCACTC +
Preference number: 1 (lower is better)
Translates to: HHCIPSTKDTVCHGW*LRGISAGCVRSKPL
Trigger: GAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTCCTTTGTGCTAGGAATACAGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CCA 90 bp GTTCACCACTGTATTCCTAGCACAAAGGACACTGTCTGCCATGGCTaGTGCTTAAGAGGCATCTCTGCTGGATGCGTCAGGAGTAAACCA +
Preference number: 1 (lower is better)
Translates to: VHHCIPSTKDTVCHG*CLRGISAGCVRSKP
Trigger: TGGTTTACTCCTGACGCATCCAGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTCCTTTGTGCTAGGAATACAGTGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR TCA 90 bp CAGTCACTACTGCTGGTGCTGATTTCCTCAGCAACAAAGATTTGTTaGACACCTACTATACACCAGGCCCCGTGCTGCTGTGCATTCCAG +
Preference number: 1 (lower is better)
Translates to: QSLLLVLISSATKIC*TPTIHQAPCCCAFQ
Trigger: CTGGAATGCACAGCAGCACGGGGCCTGGTGTATAGTAGGTGTTCAACAAATCTTTGTTGCTGAGGAAATCAGCACCAGCAGTAGTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 90 bp GACACTGTCTGCCATGGCTGGTGCTTAAGAGGCATCTCTGCTGGATaGGTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACATTTCA +
Preference number: 1 (lower is better)
Translates to: DTVCHGWCLRGISAG*VRSKPLLNSLSNIS
Trigger: TGAAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTaGCTATTCAATTTGGAAGTCTCACTGAGATTTCAAACTGATGAG +
Preference number: 1 (lower is better)
Translates to: TMCISRPKLHISASN*LFNLEVSLRFQTDE
Trigger: CTCATCAGTTTGAAATCTCAGTGAGACTTCCAAATTGAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCTGAGAGAGGGCCATaGCTGTCTGGTTCACCACTG +
Preference number: 2 (lower is better)
Translates to: SRVPLISALKAVPSAEEAPERGP*LSGSPL
Trigger: CAGTGGTGAACCAGACAGCCATGGCCCTCTCTCAGG...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCATGATCCTAAACCCTTaGGAGTCCAAGGTAGGGCAC +
Preference number: 2 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGMILNP*ESKVGH
Trigger: GTGCCCTACCTTGGACTCGCAAGGGTTTAGGATCAT...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTCCCCATTCACACAGGTaGCCCTTTCTTGTCGCTTAC +
Preference number: 2 (lower is better)
Translates to: QLTGPSRVPLISALKAVPPHSHR*PFLVAY
Trigger: GTAAGCGACAAGAAAGGGCCACCTGTGTGAATGGGG...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTAGGCGGGAGGATTGCTTaGGCCAAGGCATTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: LHFHSCSSESIPCPAARVGGRIA*AKAFEA
Trigger: AGCCTCAAATGCCTTGGCTCAAGCAATCCTCCCGCC...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGTATTATGAAACTTGGTaGTCACCCCTTAATTTACCG +
Preference number: 2 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVYYETW*SPLNLP
Trigger: CGGTAAATTAAGGGGTGATCACCAAGTTTCATAATA...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTACAAAGGACACTGTCTaGCATGGCTGGTGCTTAAGA +
Preference number: 2 (lower is better)
Translates to: QLTGPSRVPLISALKAVPTKDTV*HGWCLR
Trigger: TCTTAAGCACCAGCCATGGCAGACAGTGTCCTTTGT...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGGGCCCAGCCTCCAAGTaGTGGAGTGACCCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLGPASK*WSDPGF
Trigger: GAACCCAGGGTCACTCCACCACTTGGAGGCTGGGCC...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CAA 90 bp CCCTTCCCCCATTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTaGATCCAATTTGTCACTCCTCAGAAAGGTCTCCTTAGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: PFPHSHRWPFLVAYL*IQFVTPQKGLLRPL
Trigger: GAGGGGCCTAAGGAGACCTTTCTGAGGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAATGGGGGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTGGAGTAAACCACTCCTaGACTCACTCTCAAACATTT +
Preference number: 2 (lower is better)
Translates to: QLTGPSRVPLISALKAVPGVNHS*THSQTF
Trigger: AAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCC...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTAGCGTGTCAGCCTCCTTaGACTAACATCTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LHFHSCSSESIPCPAARVACQPP*TNISSV
Trigger: CACAGAAGAGATGTTAGTGCAAGGAGGCTGACACGC...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCCCCCATTCACACAGGTaGCCCTTTCTTGTCGCTTAC +
Preference number: 2 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTPHSHR*PFLVAY
Trigger: GTAAGCGACAAGAAAGGGCCACCTGTGTGAATGGGG...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTGGAGGGTACTGGAAATaGACTCTGTTTAAAAGCATG +
Preference number: 2 (lower is better)
Translates to: SRVPLISALKAVPSAEEAGGYWK*TLFKSM
Trigger: CATGCTTTTAAACAGAGTTCATTTCCAGTACCCTCC...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTTTGTCGCTTACCTTTTaGTCCAATTTGTCACTCCTC +
Preference number: 2 (lower is better)
Translates to: ISLASTDRPQPGTPHLSILSLTF*SNLSLL
Trigger: GAGGAGTGACAAATTGGATCAAAAGGTAAGCGACAA...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGCTCCAAGTGGTGGAGTaGCCCTGGGTTCGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLLQVVE*PWVRSL
Trigger: CAAAGACCGAACCCAGGGTCACTCCACCACTTGGAG...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTATTTCTTAAAGCAGGGTaGACTGATGGAGGGTACTGG +
Preference number: 2 (lower is better)
Translates to: LHFHSCSSESIPCPAARVFLKAG*TDGGYW
Trigger: CCAGTACCCTCCATCAGTGCACCCTGCTTTAAGAAA...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGTCTGCCATGGCTGGTaGTTAAGAGGCATCTCTGCT +
Preference number: 2 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLVCHGW*LRGISA
Trigger: AGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGAC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCGCGTGTCAGCCTCCTTaGACTAACATCTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: TMCISRPKLHISASNCLFACQPP*TNISSV
Trigger: CACAGAAGAGATGTTAGTGCAAGGAGGCTGACACGC...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCAGCAGCTGCCCAACTaGTCTCCATTTTCACTCATG +
Preference number: 2 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLQQLPN*SPFSLM
Trigger: CATGAGTGAAAATGGAGACCAGTTGGGCAGCTGCTG...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTTTCTTCAATTGCTCTTaGCATCAACGAATGATCCTA +
Preference number: 2 (lower is better)
Translates to: QLTGPSRVPLISALKAVPFFNCS*HQRMIL
Trigger: TAGGATCATTCGTTGATGTCAAGAGCAATTGAAGAA...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTATGCTATACTATTTATTaGCTTGTAGCCAGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: LHFHSCSSESIPCPAARVCYTIY*LVARRG
Trigger: GCCACGCCTGGCTACAAGTCAATAAATAGTATAGCA...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTATGATCCTAAACCCTTaGGAGTCCAAGGTAGGGCAC +
Preference number: 2 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPIMILNP*ESKVGH
Trigger: GTGCCCTACCTTGGACTCGCAAGGGTTTAGGATCAT...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTAATTTACCGACGCTGTaGATGTCTATTTGCATAGGT +
Preference number: 2 (lower is better)
Translates to: SRVPLISALKAVPSAEEANLPTL*MSICIG
Trigger: ACCTATGCAAATAGACATCCACAGCGTCGGTAAATT...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGGGAGGGTACTGGAAATaGACTCTGTTTAAAAGCATG +
Preference number: 2 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLGGYWK*TLFKSM
Trigger: CATGCTTTTAAACAGAGTTCATTTCCAGTACCCTCC...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTTATTATGAAACTTGGTaGTCACCCCTTAATTTACCG +
Preference number: 2 (lower is better)
Translates to: SRVPLISALKAVPSAEEAYYETW*SPLNLP
Trigger: CGGTAAATTAAGGGGTGATCACCAAGTTTCATAATA...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGAGAAATCTGCGTCCTaGATCGGTTCTAAGACTCAC +
Preference number: 2 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLEKSAS*IGSKTH
Trigger: GTGAGTCTTAGAACCGATTCAGGACGCAGATTTCTC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTTTCTTCAATTGCTCTTaGCATCAACGAATGATCCTA +
Preference number: 2 (lower is better)
Translates to: ISLASTDRPQPGTPHLSIFFNCS*HQRMIL
Trigger: TAGGATCATTCGTTGATGTCAAGAGCAATTGAAGAA...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCTGCTATACTATTTATTaGCTTGTAGCCAGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTCYTIY*LVARRG
Trigger: GCCACGCCTGGCTACAAGTCAATAAATAGTATAGCA...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCCATTTTTGTTGCCTaGTTCACCATCCAACCAATG +
Preference number: 2 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLPIFVA*FTIQPM
Trigger: CATTGGTTGGATGGTGAAGCAGGCAACAAAAATGGG...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGGGACACTGTCTGCCATaGCTGGTGCTTAAGAGGCAT +
Preference number: 2 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLGHCLP*LVLKRH
Trigger: ATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTCC...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCGGAGTAAACCACTCCTaGACTCACTCTCAAACATTT +
Preference number: 2 (lower is better)
Translates to: TMCISRPKLHISASNCLFGVNHS*THSQTF
Trigger: AAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCC...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTAAATTTACCGACGCTGTaGATGTCTATTTGCATAGGT +
Preference number: 2 (lower is better)
Translates to: LHFHSCSSESIPCPAARVNLPTL*MSICIG
Trigger: ACCTATGCAAATAGACATCCACAGCGTCGGTAAATT...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCAGGGCCATGGCTGTCTaGTTCACCACTGTATTCCTA +
Preference number: 2 (lower is better)
Translates to: FTQVALSCRLPFDPICHSRAMAV*FTTVFL
Trigger: TAGGAATACAGTGGTGAACCAGACAGCCATGGCCCT...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGATTTGGAAGTCTCACTaGGATTTCAAACTGATGAGC +
Preference number: 2 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLIWKSH*DFKLMS
Trigger: GCTCATCAGTTTGAAATCTCAGTGAGACTTCCAAAT...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCTCACACTTCAGCAGCTaGCCAACTGGTCTCCATTTT +
Preference number: 2 (lower is better)
Translates to: FVFELVISMNLTSEASCSSHFSS*PTGLHF
Trigger: AAAATGGAGACCAGTTGGGCAGCTGCTGAAGTGTGA...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CAA 90 bp TCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCAATTaGGAAGTCTCACTGAGATTTCAAACTGATGAGCTCCAAATGAAA +
Preference number: 2 (lower is better)
Translates to: SRPKLHISASNCLFN*EVSLRFQTDELQMK
Trigger: TTTCATTTGGAGCTCATCAGTTTGAAATCTCAGTGAGACTTCCAAATTGAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR TCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGATTTGGAAGTCTCACTaGGATTTCAAACTGATGAGC +
Preference number: 2 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLIWKSH*DFKLMS
Trigger: GCTCATCAGTTTGAAATCTCAGTGAGACTTCCAAAT...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR GCA 90 bp TTCTTCACAGTGCTTATTCGCTCTGTGATGCTATACTATTTATTGACTTGTAGCTTTCTTAAAGCAGGGTaGACTGATGGAGGGTACTGG +
Preference number: 2 (lower is better)
Translates to: FFTVLIRSVMLYYLLTCSFLKAG*TDGGYW
Trigger: CCAGTACCCTCCATCAGTGCACCCTGCTTTAAGAAA...GCTACAAGTCAATAAATAGTATAGCATCACAGAGCGAATAAGCACTGTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGGCCGTGATTGTGCCGTaGCACTCCAGCCTGGGCATT +
Preference number: 3 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVAVIVP*HSSLGI
Trigger: AATGCCCAGGCTGGAGTGCAACGGCACAATCACGGC...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CCA 72 bp CTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTaGTGGAGTGACCCTGGGTTCGGTCTTTGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: LLCIPATGPASK*WSDPGFGLWLW
Trigger: CCAGAGCCAAAGACCGAACCCAGGGTCACTCCACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR TCA 72 bp CATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGGAGTaGCCCTGGGTTCGGTCTTTGGCTCTGGTTTCTCTC +
Preference number: 3 (lower is better)
Translates to: HSSHWPSLQVVE*PWVRSLALVSL
Trigger: GAGAGAAACCAGAGCCAAAGACCGAACCCAGGGTCACTCCACCACTTGGAGGCTGGGCCAGTGGCTGGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 72 bp TTGAACACCTACTATACACCAGGCCCCGTGCTGCTGTaGATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: LNTYYTPGPVLL*IPATGPASKWW
Trigger: CCACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGTGTATAGTAGGTGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CCA 72 bp CTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTaGAGTGACCCTGGGTTCGGTCTTTGGCTCTGGTTT +
Preference number: 3 (lower is better)
Translates to: LCIPATGPASKW*SDPGFGLWLWF
Trigger: AAACCAGAGCCAAAGACCGAACCCAGGGTCACTCCACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCTTGAGCCAAGGCATTaGAGGCTTCAGGGAGCCGTG +
Preference number: 3 (lower is better)
Translates to: SRVPLISALKAVPSAEEALEPRH*RLQGAV
Trigger: CACGGCTCCCTGAAGCCTCAAATGCCTTGGCTCAAG...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGGCTGTGGATGTCTATTaGCATAGGTTCATTTTCTTA +
Preference number: 3 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVAVDVY*HRFIFL
Trigger: TAAGAAAATGAACCTATGCAAATAGACATCCACAGC...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCCTTGAGCCAAGGCATTaGAGGCTTCAGGGAGCCGTG +
Preference number: 3 (lower is better)
Translates to: TMCISRPKLHISASNCLFLEPRH*RLQGAV
Trigger: CACGGCTCCCTGAAGCCTCAAATGCCTTGGCTCAAG...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 72 bp CTCCAAGGTCCCATCCCCATGTCACACTTCAGCAGCTaGCCAACTGGTCTCCATTTTCACTCATGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: LQGPIPMSHFSS*PTGLHFHSCSS
Trigger: TGAGGAGCATGAGTGAAAATGGAGACCAGTTGGGCAGCTGCTGAAGTGTGACATGGGGATGGGACCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CCA 72 bp GCCTCCAAGTGGTGGAGTGACCCTGGGTTCGGTCTTTaGCTCTGGTTTCTCTCTATCTCTCCAAGGGATGTA +
Preference number: 3 (lower is better)
Translates to: ASKWWSDPGFGL*LWFLSISPRDV
Trigger: TACATCCCTTGGAGAGATAGAGAGAAACCAGAGCCAAAGACCGAACCCAGGGTCACTCCACCACTTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 72 bp TGCCATGGCTGGTGCTTAAGAGGCATCTCTGCTGGATaGGTCAGGAGTAAACCACTCCTGAACTCACTCTCA +
Preference number: 3 (lower is better)
Translates to: CHGWCLRGISAG*VRSKPLLNSLS
Trigger: TGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCCTCTTAAGCACCAGCCATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 72 bp ATTCCTAGCACAAAGGACACTGTCTGCCATGGCTGGTaGTTAAGAGGCATCTCTGCTGGATGCGTCAGGAGT +
Preference number: 3 (lower is better)
Translates to: IPSTKDTVCHGW*LRGISAGCVRS
Trigger: ACTCCTGACGCATCCAGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTCCTTTGTGCTAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTCTTGTCGCTTACCTTTaGATCCAATTTGTCACTCCT +
Preference number: 3 (lower is better)
Translates to: QLTGPSRVPLISALKAVPLVAYL*IQFVTP
Trigger: AGGAGTGACAAATTGGATCAAAAGGTAAGCGACAAG...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGAATGATCCTAAACCCTaGCGAGTCCAAGGTAGGGCA +
Preference number: 3 (lower is better)
Translates to: PITTIAPVPFSSQCLFALNDPKP*RVQGRA
Trigger: TGCCCTACCTTGGACTCGCAAGGGTTTAGGATCATT...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCGCTGAGGCGGGAGGATaGCTTGAGCCAAGGCATTTG +
Preference number: 3 (lower is better)
Translates to: FTQVALSCRLPFDPICHSAEAGG*LEPRHL
Trigger: CAAATGCCTTGGCTCAAGCAATCCTCCCGCCTCAGC...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTATGCTATACTATTTATaGACTTGTAGCCAGGCGTGG +
Preference number: 3 (lower is better)
Translates to: ISLASTDRPQPGTPHLSIMLYYL*TCSQAW
Trigger: CCACGCCTGGCTACAAGTCAATAAATAGTATAGCAT...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCCAACCTCCAGGGGCTaGGAGAACAGAATAAACTCC +
Preference number: 3 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPIPTSRG*ENRINS
Trigger: GGAGTTTATTCTGTTCTCCAAGCCCCTGGAGGTTGG...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 72 bp GTTCACCACTGTATTCCTAGCACAAAGGACACTGTCTaGCATGGCTGGTGCTTAAGAGGCATCTCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: VHHCIPSTKDTV*HGWCLRGISAG
Trigger: TCCAGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTCCTTTGTGCTAGGAATACAGTGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CCA 72 bp TCCCATCCCCATGTCACACTTCAGCAGCTGCCCAACTaGTCTCCATTTTCACTCATGCTCCTCAGAGTCTAT +
Preference number: 3 (lower is better)
Translates to: SHPHVTLQQLPN*SPFSLMLLRVY
Trigger: ATAGACTCTGAGGAGCATGAGTGAAAATGGAGACCAGTTGGGCAGCTGCTGAAGTGTGACATGGGGATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTAATGATCCTAAACCCTaGCGAGTCCAAGGTAGGGCA +
Preference number: 3 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPINDPKP*RVQGRA
Trigger: TGCCCTACCTTGGACTCGCAAGGGTTTAGGATCATT...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR TCA 72 bp CTGCTGGTGCTGATTTCCTCAGCAACAAAGATTTGTTaGACACCTACTATACACCAGGCCCCGTGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: LLVLISSATKIC*TPTIHQAPCCC
Trigger: ACAGCAGCACGGGGCCTGGTGTATAGTAGGTGTTCAACAAATCTTTGTTGCTGAGGAAATCAGCACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR TCA 72 bp GGTGGCTGTGACCCTTCAGAGGAGAAATCTGCGTCCTaGATCGGTTCTAAGACTCACTTCAGAAACCACTAT +
Preference number: 3 (lower is better)
Translates to: GGCDPSEEKSAS*IGSKTHFRNHY
Trigger: ATAGTGGTTTCTGAAGTGAGTCTTAGAACCGATTCAGGACGCAGATTTCTCCTCTGAAGGGTCACAGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR TCA 72 bp GCATCTCTGCTGGATGCGTCAGGAGTAAACCACTCCTaGACTCACTCTCAAACATTTCAGAGCCATCCTACT +
Preference number: 3 (lower is better)
Translates to: ASLLDASGVNHS*THSQTFQSHPT
Trigger: AGTAGGATGGCTCTGAAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR TCA 72 bp GGGCTTGGAGAACAGAATAAACTCCTAGGCCCTATGTaGTCTAACCCTGCAATTTCTCTGGCCTCAACTGAC +
Preference number: 3 (lower is better)
Translates to: GLGEQNKLLGPM*SNPAISLASTD
Trigger: GTCAGTTGAGGCCAGAGAAATTGCAGGGTTAGATCACATAGGGCCTAGGAGTTTATTCTGTTCTCCAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 72 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTaGATCCAACTGCCTATTCAATTTGGAAGTCTCACT +
Preference number: 3 (lower is better)
Translates to: NNVHLQAQAPHL*IQLPIQFGSLT
Trigger: AGTGAGACTTCCAAATTGAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGGCTGTGGATGTCTATTaGCATAGGTTCATTTTCTTA +
Preference number: 3 (lower is better)
Translates to: PITTIAPVPFSSQCLFALAVDVY*HRFIFL
Trigger: TAAGAAAATGAACCTATGCAAATAGACATCCACAGC...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR GCA 72 bp ATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTaGCTATTCAATTTGGAAGTCTCACTGAGATTTCAA +
Preference number: 3 (lower is better)
Translates to: ISRPKLHISASN*LFNLEVSLRFQ
Trigger: TTGAAATCTCAGTGAGACTTCCAAATTGAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTATTCTTCAATTGCTCTaGACATCAACGAATGATCCT +
Preference number: 3 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPIILQLL*TSTNDP
Trigger: AGGATCATTCGTTGATGTCAAGAGCAATTGAAGAAT...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGCTTGTCGCTTACCTTTaGATCCAATTTGTCACTCCT +
Preference number: 3 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLLVAYL*IQFVTP
Trigger: AGGAGTGACAAATTGGATCAAAAGGTAAGCGACAAG...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR-3UTR CAA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCAACTGCCTATTCAATTaGGAAGTCTCACTGAGATTT +
Preference number: 3 (lower is better)
Translates to: FVFELVISMNLTSEASCSNCLFN*EVSLRF
Trigger: AAATCTCAGTGAGACTTCCAAATTGAATAGGCAGTT...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCCCCCGCACGCCGCGCTaGAGGTGCACGATGCACACC +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGPRTPR*RCTMHT
Trigger: GGTGTGCATCGTGCACCTGCAGCGCGGCGTGCGGGG...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGAGCCGGAAGTCCTGCTaGGACACGCGGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVSRKSC*DTRIWW
Trigger: CCACCAGATCCGCGTGTCCCAGCAGGACTTCCGGCT...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCCCGAATAGCCCCAGATaGGCGCCAGCAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGPNSPR*APAALP
Trigger: GGGCAGTGCTGCTGGCGCTCATCTGGGGCTATTCGG...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTTGGCTTGCTCCAGGCTaGGCAAGGGCGCGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: SRVPLISALKAVPSAEEAWLAPG*ARARRP
Trigger: CGGGCGACGCGCCCTTGCGCAGCCTGGAGCAAGCCA...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGAAGGGAAAGCGGGTaGGGTTGGCTTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGRRESG*GWLAPG
Trigger: GCCTGGAGCAAGCCAACCGCACCCGCTTTCCCTTCT...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTGCTGCAGGTGCACGATaGACACCATGCGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QLTGPSRVPLISALKAVPAAGAR*TPCAPG
Trigger: GCCTGGAGCGCATGGTGTGCATCGTGCACCTGCAGC...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAAGAGCCGGAAGTCCTaGTGGGACACGCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGKSRKS*WDTRIW
Trigger: CCAGATCCGCGTGTCCCAGCAGGACTTCCGGCTCTT...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTGGCCCAGCCTCCAAGTaGTGGAGTGACCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: QLTGPSRVPLISALKAVPGPASK*WSDPGF
Trigger: GAACCCAGGGTCACTCCACCACTTGGAGGCTGGGCC...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCGTGCATTCCAGCCACTaGCCCAGCCTCCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGVHSSH*PSLQVV
Trigger: CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCAC...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTGCTGCAGGTGCACGATaGACACCATGCGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ISLASTDRPQPGTPHLSIAAGAR*TPCAPG
Trigger: GCCTGGAGCGCATGGTGTGCATCGTGCACCTGCAGC...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGCCCCGCACGCCGCGCTaGAGGTGCACGATGCACACC +
Preference number: 4 (lower is better)
Translates to: PITTIAPVPFSSQCLFALPRTPR*RCTMHT
Trigger: GGTGTGCATCGTGCACCTGCAGCGCGGCGTGCGGGG...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGAGATCTCTCCAGGAATaGTGGGCCAAATCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVRSLQE*WAKSVC
Trigger: GCACACTGATTTGGCCCACCATTCCTGGAGAGATCT...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTGTGCATTCCAGCCACTaGCCCAGCCTCCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: QLTGPSRVPLISALKAVPVHSSH*PSLQVV
Trigger: CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCAC...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGGCCAGGCTTACCGTaGGCCTCTTCCTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: QLTGPSRVPLISALKAVPRPGLP*ASSLMP
Trigger: AGGCATCAAGGAAGAGGCTCACGGTAAGCCTGGCCT...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGTTTGTGATCTCACTGTaGGTCACGACAGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVFVISL*VTTALA
Trigger: TGCAAGAGCTGTCGTGACTCACAGTGAGATCACAAA...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371483.8
CDS-3UTR GCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCGGGTGCGGTTGGCTTaGTCCAGGCTGCGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLRVRLA*SRLRKG
Trigger: GCCCTTGCGCAGCCTGGAGCAAGCCAACCGCACCCG...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGACGCCGCGCTGCAGGTaGACGATGCACACCATGCGC +
Preference number: 4 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLTPRCR*TMHTMR
Trigger: GCGCATGGTGTGCATCGTGCACCTGCAGCGCGGCGT...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGGCGCCGGGGAGCCGTTaGGGGACGACTCGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLAPGSR*GTTRKK
Trigger: CTTCTTCCGAGTCGTCCCGCAACGGCTCCCCGGCGC...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGGCGCCGGGGAGCCGTTaGGGGACGACTCGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PITTIAPVPFSSQCLFALAPGSR*GTTRKK
Trigger: CTTCTTCCGAGTCGTCCCGCAACGGCTCCCCGGCGC...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTAGGCCCCGTGCTGCTGTaGATTCCAGCCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHFHSCSSESIPCPAARVGPVLL*IPATGP
Trigger: TGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCC...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCCGGCCCGCAGCGGTCTaGGAGAGTGCTCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: TMCISRPKLHISASNCLFRPAAV*ESAHLG
Trigger: TCCCAGATGAGCACTCTCTCAGACCGCTGCGGGCCG...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCGAATAGCCCCAGATaGGCGCCAGCAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLPNSPR*APAALP
Trigger: GGGCAGTGCTGCTGGCGCTCATCTGGGGCTATTCGG...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGTTCTCTGGCCTCAACTaGCAGGCCCCAGCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLFSGLN*QAPAGY
Trigger: GTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAA...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTGCCCAGCAGCGACACTaGAAAGATGAGCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: ISLASTDRPQPGTPHLSIAQQRH*KDEHQH
Trigger: GTGCTGGTGCTCATCTTTGCAGTGTCGCTGCTGGGC...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCACGCCGCGCTGCAGGTaGACGATGCACACCATGCGC +
Preference number: 4 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTTPRCR*TMHTMR
Trigger: GCGCATGGTGTGCATCGTGCACCTGCAGCGCGGCGT...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTAGAAAGCGGGTGCGGTTaGCTTGCTCCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LHFHSCSSESIPCPAARVESGCG*LAPGCA
Trigger: TGCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTC...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGCCAGCACCAGCCGGTaGTCGCCCTTGACGTCGGAG +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLASTSR*SPLTSE
Trigger: CTCCGACGTCAAGGGCGACCACCGGCTGGTGCTGGC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCGCCGGTGGTCGCCCTTaGCGTCGGAGAAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TMCISRPKLHISASNCLFAGGRP*RRRRRE
Trigger: TTCCCTTCTTCTCCGACGTCAAGGGCGACCACCGGC...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp GGGCACAGGGTGGCTGTGACCCTTCAGAGGAGAAATCTGCGTCCTGAATCGGTTGCGACACTGCAAAGATaGGCACCAGCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GHRVAVTLQRRNLRPESVATLQR*APARLS
Trigger: AGACAACCGTGCTGGTGCTCATCTTTGCAGTGTCGC...AACCGATTCAGGACGCAGATTTCTCCTCTGAAGGGTCACAGCCACCCTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGGCCCCTCCCCATCTaGTCTAAATTCCCATCACTA +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGRPLPI*SKFPSL
Trigger: TAGTGATGGGAATTTAGATCAGATGGGGAGGGGCCT...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCTTCTCTGGCCTCAACTaGCAGGCCCCAGCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: TMCISRPKLHISASNCLFFSGLN*QAPAGY
Trigger: GTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAA...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCTCAGAGTATTCCCCTTaGGTTCTCCCTTTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGSEYSP*VLPFPH
Trigger: GTGAGGGAAAGGGAGAACTCAAGGGGAATACTCTGA...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGTGGCTTGCTCCAGGCTaGGCAAGGGCGCGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLWLAPG*ARARRP
Trigger: CGGGCGACGCGCCCTTGCGCAGCCTGGAGCAAGCCA...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCCCAGGGCGCACACGTTaGCCAGCAGCGACACTGCAA +
Preference number: 4 (lower is better)
Translates to: TMCISRPKLHISASNCLFPGRTR*PAATLQ
Trigger: TTGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGG...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp GGCATCTCTGCTGGATGCGTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACGGCCCAGCCTCCAAGTaGTGGAGTGACCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GISAGCVRSKPLLNSLSNGPASK*WSDPGF
Trigger: GAACCCAGGGTCACTCCACCACTTGGAGGCTGGGCC...GTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGCCGGTGGTCGCCCTTaGCGTCGGAGAAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLAGGRP*RRRRRE
Trigger: TTCCCTTCTTCTCCGACGTCAAGGGCGACCACCGGC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCCGCGCAGAAGAGGTTaGGTACCAGGCAGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPIPRRRG*VPGRQS
Trigger: CGACTGCCTGCCTGGTACTCAACCTCTTCTGCGCGG...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGAGAAGGGAAAGCGGGTaGGGTTGGCTTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLRRESG*GWLAPG
Trigger: GCCTGGAGCAAGCCAACCGCACCCGCTTTCCCTTCT...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGAAAGCGGGTGCGGTTaGCTTGCTCCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLESGCG*LAPGCA
Trigger: TGCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCGCCAGCACCAGCCGGTaGTCGCCCTTGACGTCGGAG +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSASTSR*SPLTSE
Trigger: CTCCGACGTCAAGGGCGACCACCGGCTGGTGCTGGC...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAAGCCGGAAGTCCTGCTaGGACACGCGGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLSRKSC*DTRIWW
Trigger: CCACCAGATCCGCGTGTCCCAGCAGGACTTCCGGCT...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTGGACACTGTCTGCCATaGCTGGTGCTTAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: ISLASTDRPQPGTPHLSIGHCLP*LVLKRH
Trigger: ATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTCC...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCCCATTCACACAGGTaGCCCTTTCTTGTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: SRVPLISALKAVPSAEEAPHSHR*PFLVAY
Trigger: GTAAGCGACAAGAAAGGGCCACCTGTGTGAATGGGG...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCCGGCCCGCAGCGGTCTaGGAGAGTGCTCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSRPAAV*ESAHLG
Trigger: TCCCAGATGAGCACTCTCTCAGACCGCTGCGGGCCG...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGAGGCCAGGCTTACCGTaGGCCTCTTCCTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLRPGLP*ASSLMP
Trigger: AGGCATCAAGGAAGAGGCTCACGGTAAGCCTGGCCT...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCGCCCAGCAGCGACACTaGAAAGATGAGCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: TMCISRPKLHISASNCLFAQQRH*KDEHQH
Trigger: GTGCTGGTGCTCATCTTTGCAGTGTCGCTGCTGGGC...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAAAGAGCCGGAAGTCCTaGTGGGACACGCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLKSRKS*WDTRIW
Trigger: CCAGATCCGCGTGTCCCAGCAGGACTTCCGGCTCTT...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGCTGCTCCAGAAACTaGATAAGCAGTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: QLTGPSRVPLISALKAVPSCSRN*ISSHYC
Trigger: GCAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCT...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCCAAATCGAAATTTCCTaGTCGGCGCCGGGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTQIEIS*SAPGSR
Trigger: ACGGCTCCCCGGCGCCGACCAGGAAATTTCGATTTG...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTAGGGCCATGGCTGTCTaGTTCACCACTGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: SRVPLISALKAVPSAEEARAMAV*FTTVFL
Trigger: TAGGAATACAGTGGTGAACCAGACAGCCATGGCCCT...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGACCCTGCAATTTCTCTaGCCTCAACTGACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLTLQFL*PQLTGP
Trigger: GGGGCCTGTCAGTTGAGGCCAGAGAAATTGCAGGGT...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp GGCATCTCTGCTGGATGCGTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACGCGACACTGCAAAGATaGGCACCAGCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GISAGCVRSKPLLNSLSNATLQR*APARLS
Trigger: AGACAACCGTGCTGGTGCTCATCTTTGCAGTGTCGC...GTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCCCGCGCAGAAGAGGTTaGGTACCAGGCAGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSPRRRG*VPGRQS
Trigger: CGACTGCCTGCCTGGTACTCAACCTCTTCTGCGCGG...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGGCGGGAGGATTGCTTaGGCCAAGGCATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLGGRIA*AKAFEA
Trigger: AGCCTCAAATGCCTTGGCTCAAGCAATCCTCCCGCC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCTCCAAGTGGTGGAGTaGCCCTGGGTTCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPILQVVE*PWVRSL
Trigger: CAAAGACCGAACCCAGGGTCACTCCACCACTTGGAG...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTACTCCAAGTGGTGGAGTaGCCCTGGGTTCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLLQVVE*PWVRSL
Trigger: CAAAGACCGAACCCAGGGTCACTCCACCACTTGGAG...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCACTACTGCTGGTGCTaGTTTCCTCAGCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: SRVPLISALKAVPSAEEAHYCWC*FPQQQR
Trigger: TCTTTGTTGCTGAGGAAATCAGCACCAGCAGTAGTG...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTTGGCTTGCTCCAGGCTaGGCAAGGGCGCGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCWLAPG*ARARRP
Trigger: CGGGCGACGCGCCCTTGCGCAGCCTGGAGCAAGCCA...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGCCAGGGCGCACACGTTaGCCAGCAGCGACACTGCAA +
Preference number: 4 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLPGRTR*PAATLQ
Trigger: TTGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGG...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCTGTTACAGGTAACCTCTCAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCACGCCGCGCTGCAGGTaGACGATGCACACCATGCGC +
Preference number: 4 (lower is better)
Translates to: SVTGNLSNLSSFIQWKLITPRCR*TMHTMR
Trigger: GCGCATGGTGTGCATCGTGCACCTGCAGCGCGGCGT...GATGAGCTTCCACTGGATGAAGCTACTGAGATTTGAGAGGTTACCTGTAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTCCCCGCACGCCGCGCTaGAGGTGCACGATGCACACC +
Preference number: 4 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCPRTPR*RCTMHT
Trigger: GGTGTGCATCGTGCACCTGCAGCGCGGCGTGCGGGG...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp AGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTTCACACTTCAGCAGCTaGCCAACTGGTCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: SRVPLISALKAVPSAEEASHFSS*PTGLHF
Trigger: AAAATGGAGACCAGTTGGGCAGCTGCTGAAGTGTGA...AGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCACCCTGCAATTTCTCTaGCCTCAACTGACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTTLQFL*PQLTGP
Trigger: GGGGCCTGTCAGTTGAGGCCAGAGAAATTGCAGGGT...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTTTCGGTCTTTGGCTCTaGTTTCTCTCTATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QLTGPSRVPLISALKAVPFGLWL*FLSISP
Trigger: TGGAGAGATAGAGAGAAACCAGAGCCAAAGACCGAA...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTGGAGGGTACTGGAAATaGACTCTGTTTAAAAGCATG +
Preference number: 4 (lower is better)
Translates to: QLTGPSRVPLISALKAVPGGYWK*TLFKSM
Trigger: CATGCTTTTAAACAGAGTTCATTTCCAGTACCCTCC...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGAGGCCCCTCCCCATCTaGTCTAAATTCCCATCACTA +
Preference number: 4 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLRPLPI*SKFPSL
Trigger: TAGTGATGGGAATTTAGATCAGATGGGGAGGGGCCT...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCATTTGGAAGTCTCACTaGGATTTCAAACTGATGAGC +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGIWKSH*DFKLMS
Trigger: GCTCATCAGTTTGAAATCTCAGTGAGACTTCCAAAT...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCGCAACAAAGATTTGTTaGACACCTACTATACACCAG +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGATKIC*TPTIHQ
Trigger: CTGGTGTATAGTAGGTGTTCAACAAATCTTTGTTGC...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCACGGGTGCGGTTGGCTTaGTCCAGGCTGCGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FDAVKVKVTATSVTGNLSRVRLA*SRLRKG
Trigger: GCCCTTGCGCAGCCTGGAGCAAGCCAACCGCACCCG...TGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp TCTGTTACAGGTAACCTCTCAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCCCAGGGCGCACACGTTaGCCAGCAGCGACACTGCAA +
Preference number: 4 (lower is better)
Translates to: SVTGNLSNLSSFIQWKLIPGRTR*PAATLQ
Trigger: TTGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGG...GATGAGCTTCCACTGGATGAAGCTACTGAGATTTGAGAGGTTACCTGTAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp TTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCAGCGCCGGGGAGCCGTTaGGGGACGACTCGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FDAVKVKVTATSVTGNLSAPGSR*GTTRKK
Trigger: CTTCTTCCGAGTCGTCCCGCAACGGCTCCCCGGCGC...TGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp GGGCACAGGGTGGCTGTGACCCTTCAGAGGAGAAATCTGCGTCCTGAATCGGTTCAAGCTCCACATCTCTaGATCCAACTGCCTATTCAA +
Preference number: 4 (lower is better)
Translates to: GHRVAVTLQRRNLRPESVQAPHL*IQLPIQ
Trigger: TTGAATAGGCAGTTGGATGCAGAGATGTGGAGCTTG...AACCGATTCAGGACGCAGATTTCTCCTCTGAAGGGTCACAGCCACCCTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp GGGCACAGGGTGGCTGTGACCCTTCAGAGGAGAAATCTGCGTCCTGAATCGGTTCACAATGACCAGTCCTaGCACCAAGAAGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GHRVAVTLQRRNLRPESVHNDQS*HQEVQS
Trigger: ACTTTGAACTTCTTGGTGCCAGGACTGGTCATTGTG...AACCGATTCAGGACGCAGATTTCTCCTCTGAAGGGTCACAGCCACCCTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTTCTTGCTTGAAGTTCTaGATCAGGATGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ISLASTDRPQPGTPHLSISCLKF*IRMRRM
Trigger: CATCCTCCTCATCCTGATCCAGAACTTCAAGCAAGA...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAATTTACCGACGCTGTaGATGTCTATTTGCATAGGT +
Preference number: 4 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGNLPTL*MSICIG
Trigger: ACCTATGCAAATAGACATCCACAGCGTCGGTAAATT...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCGGACACTGTCTGCCATaGCTGGTGCTTAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TMCISRPKLHISASNCLFGHCLP*LVLKRH
Trigger: ATGCCTCTTAAGCACCAGCCATGGCAGACAGTGTCC...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTAAGGGCCATGGCTGTCTaGTTCACCACTGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: LHFHSCSSESIPCPAARVRAMAV*FTTVFL
Trigger: TAGGAATACAGTGGTGAACCAGACAGCCATGGCCCT...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCACCGAATAGCCCCAGATaGGCGCCAGCAGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: FDAVKVKVTATSVTGNLSPNSPR*APAALP
Trigger: GGGCAGTGCTGCTGGCGCTCATCTGGGGCTATTCGG...TGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR TCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCGGCGGGAGGATTGCTTaGGCCAAGGCATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSGGRIA*AKAFEA
Trigger: AGCCTCAAATGCCTTGGCTCAAGCAATCCTCCCGCC...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCTCAGAGTATTCCCCTTaGGTTCTCCCTTTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTSEYSP*VLPFPH
Trigger: GTGAGGGAAAGGGAGAACTCAAGGGGAATACTCTGA...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CTCCATTTTCACTCATGCTCCTCAGAGTCTATTCCCTGCCCAGCAGCCAGGGTACACTACTGCTGGTGCTaGTTTCCTCAGCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: LHFHSCSSESIPCPAARVHYCWC*FPQQQR
Trigger: TCTTTGTTGCTGAGGAAATCAGCACCAGCAGTAGTG...TACCCTGGCTGCTGGGCAGGGAATAGACTCTGAGGAGCATGAGTGAAAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GGGCACAGGGTGGCTGTGACCCTTCAGAGGAGAAATCTGCGTCCTGAATCGGTTTGGGCCAAATCAGTGTaGAAATCGAAATTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GHRVAVTLQRRNLRPESVWAKSV*KSKFPG
Trigger: ACCAGGAAATTTCGATTTGCACACTGATTTGGCCCA...AACCGATTCAGGACGCAGATTTCTCCTCTGAAGGGTCACAGCCACCCTGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCGCGTGTCAGCCTCCTTaGACTAACATCTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTACQPP*TNISSV
Trigger: CACAGAAGAGATGTTAGTGCAAGGAGGCTGACACGC...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGGCGTGTCAGCCTCCTTaGACTAACATCTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLACQPP*TNISSV
Trigger: CACAGAAGAGATGTTAGTGCAAGGAGGCTGACACGC...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGCAAATCGAAATTTCCTaGTCGGCGCCGGGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLQIEIS*SAPGSR
Trigger: ACGGCTCCCCGGCGCCGACCAGGAAATTTCGATTTG...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp GTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACATTTCAGAGCCATCCTACCCTGAGAGAGGGCCATaGCTGTCTGGTTCACCACTG +
Preference number: 4 (lower is better)
Translates to: VRSKPLLNSLSNISEPSYPERGP*LSGSPL
Trigger: CAGTGGTGAACCAGACAGCCATGGCCCTCTCTCAGG...GTAGGATGGCTCTGAAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CAA 72 bp CTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTaGCCAACCTCCAGGGGCTTGGAGAACAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: LCTHSSGHVSLQ*PTSRGLENRIN
Trigger: GTTTATTCTGTTCTCCAAGCCCCTGGAGGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTGCCGGTGGTCGCCCTTaGCGTCGGAGAAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCAGGRP*RRRRRE
Trigger: TTCCCTTCTTCTCCGACGTCAAGGGCGACCACCGGC...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR TCA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTCCGCGCAGAAGAGGTTaGGTACCAGGCAGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCPRRRG*VPGRQS
Trigger: CGACTGCCTGCCTGGTACTCAACCTCTTCTGCGCGG...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR TCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGTGCTATACTATTTATTaGCTTGTAGCCAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLCYTIY*LVARRG
Trigger: GCCACGCCTGGCTACAAGTCAATAAATAGTATAGCA...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCTGTTACAGGTAACCTCTCAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCGCCCAGCAGCGACACTaGAAAGATGAGCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: SVTGNLSNLSSFIQWKLIAQQRH*KDEHQH
Trigger: GTGCTGGTGCTCATCTTTGCAGTGTCGCTGCTGGGC...GATGAGCTTCCACTGGATGAAGCTACTGAGATTTGAGAGGTTACCTGTAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp GATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCAAATGCTGCAGGTGCACGATaGACACCATGCGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: DAVKVKVTATSVTGNLSNAAGAR*TPCAPG
Trigger: GCCTGGAGCGCATGGTGTGCATCGTGCACCTGCAGC...ATTTGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCAGATGACCAGGTCTTaGTTGAAGTTCTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLQMTRS*LKFWIR
Trigger: CCTGATCCAGAACTTCAAGCAAGACCTGGTCATCTG...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCTCCAAACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGTTTCTTAAAGCAGGGTaGACTGATGGAGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: SPNNVHLQAQAPHLCIQLFLKAG*TDGGYW
Trigger: CCAGTACCCTCCATCAGTGCACCCTGCTTTAAGAAA...CAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCTTTCTTAAAGCAGGGTaGACTGATGGAGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTFLKAG*TDGGYW
Trigger: CCAGTACCCTCCATCAGTGCACCCTGCTTTAAGAAA...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAATGATCCTAAACCCTTaGGAGTCCAAGGTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLMILNP*ESKVGH
Trigger: GTGCCCTACCTTGGACTCGCAAGGGTTTAGGATCAT...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGAGCCAGGGTAATCTTTaGACACATTCATCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLSQGNL*THSSGH
Trigger: GTGACCTGATGAATGTGTGCAAAGATTACCCTGGCT...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCTCACACTTCAGCAGCTaGCCAACTGGTCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTSHFSS*PTGLHF
Trigger: AAAATGGAGACCAGTTGGGCAGCTGCTGAAGTGTGA...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GGCATCTCTGCTGGATGCGTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACAGCTGCTCCAGAAACTaGATAAGCAGTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: GISAGCVRSKPLLNSLSNSCSRN*ISSHYC
Trigger: GCAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCT...GTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTGAAAGCGGGTGCGGTTaGCTTGCTCCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCESGCG*LAPGCA
Trigger: TGCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTC...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CCA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGTCTCTCCAGGAATGGTaGGCCAAATCAGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PITTIAPVPFSSQCLFALSLQEW*AKSVCK
Trigger: TTTGCACACTGATTTGGCCCACCATTCCTGGAGAGA...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAATTTACCGACGCTGTaGATGTCTATTTGCATAGGT +
Preference number: 4 (lower is better)
Translates to: ISLASTDRPQPGTPHLSINLPTL*MSICIG
Trigger: ACCTATGCAAATAGACATCCACAGCGTCGGTAAATT...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCCCTGAGAGAGGGCCATaGCTGTCTGGTTCACCACTG +
Preference number: 4 (lower is better)
Translates to: FVFELVISMNLTSEASCSPERGP*LSGSPL
Trigger: CAGTGGTGAACCAGACAGCCATGGCCCTCTCTCAGG...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTACAGCAGCTGCCCAACTaGTCTCCATTTTCACTCATG +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLQQLPN*SPFSLM
Trigger: CATGAGTGAAAATGGAGACCAGTTGGGCAGCTGCTG...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCAGCAGCTGCCCAACTaGTCTCCATTTTCACTCATG +
Preference number: 4 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPIQQLPN*SPFSLM
Trigger: CATGAGTGAAAATGGAGACCAGTTGGGCAGCTGCTG...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCCTGGGTTCGGTCTTTaGCTCTGGTTTCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPIPGFGL*LWFLSI
Trigger: GATAGAGAGAAACCAGAGCCAAAGACCGAACCCAGG...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp ATTTCTCTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTTATTATGAAACTTGGTaGTCACCCCTTAATTTACCG +
Preference number: 4 (lower is better)
Translates to: ISLASTDRPQPGTPHLSIYYETW*SPLNLP
Trigger: CGGTAAATTAAGGGGTGATCACCAAGTTTCATAATA...AATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCTCTCATTCACATAAAGTCAAGAAGGGAAAGCGGGTaGGGTTGGCTTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QISVASSSGSSSLIHIKSRRESG*GWLAPG
Trigger: GCCTGGAGCAAGCCAACCGCACCCGCTTTCCCTTCT...TGACTTTATGTGAATGAGAGATGAGCTTCCACTGGATGAAGCTACTGAGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGTCTTCCACTCATTCCTaGACAGTGTCATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLSSTHS*TVSCCR
Trigger: TCTACAACATGACACTGTGCAGGAATGAGTGGAAGA...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACATTTCAGAGCCATCCTACGTCTGCCATGGCTGGTaGTTAAGAGGCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VRSKPLLNSLSNISEPSYVCHGW*LRGISA
Trigger: AGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGAC...GTAGGATGGCTCTGAAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCGTCTGCCATGGCTGGTaGTTAAGAGGCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSVCHGW*LRGISA
Trigger: AGCAGAGATGCCTCTTAAGCACCAGCCATGGCAGAC...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGCCCATTTTTGTTGCCTaGTTCACCATCCAACCAATG +
Preference number: 4 (lower is better)
Translates to: PITTIAPVPFSSQCLFALPIFVA*FTIQPM
Trigger: CATTGGTTGGATGGTGAAGCAGGCAACAAAAATGGG...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TTCTTCACAGTGCTTATTCGCTCTGTGATGCTATACTATTTATTGACTTGTAGCGGCCCCGTGCTGCTGTaGATTCCAGCCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FFTVLIRSVMLYYLLTCSGPVLL*IPATGP
Trigger: TGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCC...GCTACAAGTCAATAAATAGTATAGCATCACAGAGCGAATAAGCACTGTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGAGTCACGACAGCTCTTaGATCCAGGAGGTGTTCCGA +
Preference number: 4 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLSHDSS*IQEVFR
Trigger: TCGGAACACCTCCTGGATGCAAGAGCTGTCGTGACT...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371483.8
CDS-3UTR CCA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCCACAATGACCAGTCCTaGCACCAAGAAGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: TMCISRPKLHISASNCLFHNDQS*HQEVQS
Trigger: ACTTTGAACTTCTTGGTGCCAGGACTGGTCATTGTG...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp GTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACATTTCAGAGCCATCCTACCCCCATTCACACAGGTaGCCCTTTCTTGTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: VRSKPLLNSLSNISEPSYPHSHR*PFLVAY
Trigger: GTAAGCGACAAGAAAGGGCCACCTGTGTGAATGGGG...GTAGGATGGCTCTGAAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCGGAGGGTACTGGAAATaGACTCTGTTTAAAAGCATG +
Preference number: 4 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTGGYWK*TLFKSM
Trigger: CATGCTTTTAAACAGAGTTCATTTCCAGTACCCTCC...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGCGTGAGCCTCTTCCTTaGTGCCTTTGTGATCTCACT +
Preference number: 4 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLREPLP*CLCDLT
Trigger: AGTGAGATCACAAAGGCATCAAGGAAGAGGCTCACG...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371483.8
CDS-3UTR GCA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGTCTTCCACTCATTCCTaGACAGTGTCATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PITTIAPVPFSSQCLFALSSTHS*TVSCCR
Trigger: TCTACAACATGACACTGTGCAGGAATGAGTGGAAGA...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp GATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCAAATCAAATCGAAATTTCCTaGTCGGCGCCGGGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: DAVKVKVTATSVTGNLSNQIEIS*SAPGSR
Trigger: ACGGCTCCCCGGCGCCGACCAGGAAATTTCGATTTG...ATTTGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCAGATCTCTCCAGGAATaGTGGGCCAAATCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSRSLQE*WAKSVC
Trigger: GCACACTGATTTGGCCCACCATTCCTGGAGAGATCT...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTATTCGGTCTTTGGCTCTaGTTTCTCTCTATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLFGLWL*FLSISP
Trigger: TGGAGAGATAGAGAGAAACCAGAGCCAAAGACCGAA...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTGCGACACTGCAAAGATaGGCACCAGCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCATLQR*APARLS
Trigger: AGACAACCGTGCTGGTGCTCATCTTTGCAGTGTCGC...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR TCA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGTATTATGAAACTTGGTaGTCACCCCTTAATTTACCG +
Preference number: 4 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLYYETW*SPLNLP
Trigger: CGGTAAATTAAGGGGTGATCACCAAGTTTCATAATA...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCGAGAAATCTGCGTCCTaGATCGGTTCTAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSEKSAS*IGSKTH
Trigger: GTGAGTCTTAGAACCGATTCAGGACGCAGATTTCTC...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTATTGTCGCTTACCTTTTaGTCCAATTTGTCACTCCTC +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLLSLTF*SNLSLL
Trigger: GAGGAGTGACAAATTGGATCAAAAGGTAAGCGACAA...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGATTTGGAAGTCTCACTaGGATTTCAAACTGATGAGC +
Preference number: 4 (lower is better)
Translates to: PITTIAPVPFSSQCLFALIWKSH*DFKLMS
Trigger: GCTCATCAGTTTGAAATCTCAGTGAGACTTCCAAAT...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACATTTCAGAGCCATCCTACCAGATGACCAGGTCTTaGTTGAAGTTCTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: VRSKPLLNSLSNISEPSYQMTRS*LKFWIR
Trigger: CCTGATCCAGAACTTCAAGCAAGACCTGGTCATCTG...GTAGGATGGCTCTGAAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCACAAAGGACACTGTCTaGCATGGCTGGTGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSTKDTV*HGWCLR
Trigger: TCTTAAGCACCAGCCATGGCAGACAGTGTCCTTTGT...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGTATCTCCAAACAATGTaGATCTCCAGGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLYLQTM*ISRPKL
Trigger: GAGCTTGGGCCTGGAGATGCACATTGTTTGGAGATA...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCCCTGGGTTCGGTCTTTaGCTCTGGTTTCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: FVFELVISMNLTSEASCSPGFGL*LWFLSI
Trigger: GATAGAGAGAAACCAGAGCCAAAGACCGAACCCAGG...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGTTCTTCAATTGCTCTTaGCATCAACGAATGATCCTA +
Preference number: 4 (lower is better)
Translates to: PITTIAPVPFSSQCLFALFFNCS*HQRMIL
Trigger: TAGGATCATTCGTTGATGTCAAGAGCAATTGAAGAA...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGCAACAAAGATTTGTTaGACACCTACTATACACCAG +
Preference number: 4 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLATKIC*TPTIHQ
Trigger: CTGGTGTATAGTAGGTGTTCAACAAATCTTTGTTGC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCACAAAGGACACTGTCTaGCATGGCTGGTGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: FVFELVISMNLTSEASCSTKDTV*HGWCLR
Trigger: TCTTAAGCACCAGCCATGGCAGACAGTGTCCTTTGT...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCCCCATTTTTGTTGCCTaGTTCACCATCCAACCAATG +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSPIFVA*FTIQPM
Trigger: CATTGGTTGGATGGTGAAGCAGGCAACAAAAATGGG...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCTCTCTCCAGGAATGGTaGGCCAAATCAGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: FVFELVISMNLTSEASCSSLQEW*AKSVCK
Trigger: TTTGCACACTGATTTGGCCCACCATTCCTGGAGAGA...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
3UTR CAA 72 bp CATTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTaGATCCAATTTGTCACTCCTCAGAAAGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HSHRWPFLVAYL*IQFVTPQKGLL
Trigger: AAGGAGACCTTTCTGAGGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCGGAGTAAACCACTCCTaGACTCACTCTCAAACATTT +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSGVNHS*THSQTF
Trigger: AAATGTTTGAGAGTGAGTTCAGGAGTGGTTTACTCC...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCTGCTATACTATTTATTaGCTTGTAGCCAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: FVFELVISMNLTSEASCSCYTIY*LVARRG
Trigger: GCCACGCCTGGCTACAAGTCAATAAATAGTATAGCA...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCTTGTCGCTTACCTTTTaGTCCAATTTGTCACTCCTC +
Preference number: 4 (lower is better)
Translates to: FTQVALSCRLPFDPICHSLSLTF*SNLSLL
Trigger: GAGGAGTGACAAATTGGATCAAAAGGTAAGCGACAA...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGTGGGCCAAATCAGTGTaGAAATCGAAATTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLWAKSV*KSKFPG
Trigger: ACCAGGAAATTTCGATTTGCACACTGATTTGGCCCA...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CCA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTAGATCTCTCCAGGAATaGTGGGCCAAATCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCRSLQE*WAKSVC
Trigger: GCACACTGATTTGGCCCACCATTCCTGGAGAGATCT...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp TCTGTTACAGGTAACCTCTCAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCTGGGCCAAATCAGTGTaGAAATCGAAATTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SVTGNLSNLSSFIQWKLIWAKSV*KSKFPG
Trigger: ACCAGGAAATTTCGATTTGCACACTGATTTGGCCCA...GATGAGCTTCCACTGGATGAAGCTACTGAGATTTGAGAGGTTACCTGTAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp TTCTTCACAGTGCTTATTCGCTCTGTGATGCTATACTATTTATTGACTTGTAGCATGATCCTAAACCCTTaGGAGTCCAAGGTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FFTVLIRSVMLYYLLTCSMILNP*ESKVGH
Trigger: GTGCCCTACCTTGGACTCGCAAGGGTTTAGGATCAT...GCTACAAGTCAATAAATAGTATAGCATCACAGAGCGAATAAGCACTGTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR GCA 90 bp TCTGTTACAGGTAACCTCTCAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCCAGTCAGAAGATAAATaGTGCTCCACTTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SVTGNLSNLSSFIQWKLIQSEDK*CSTSLF
Trigger: AAACAAGGAAGTGGAGCAGCATTTATCTTCTGACTG...GATGAGCTTCCACTGGATGAAGCTACTGAGATTTGAGAGGTTACCTGTAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CCA 90 bp TTAGGAGTTAGTGATGTGTTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTTCTCTCCAGGAATGGTaGGCCAAATCAGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: LGVSDVFDAVKVKVTATSSLQEW*AKSVCK
Trigger: TTTGCACACTGATTTGGCCCACCATTCCTGGAGAGA...AGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAACACATCACTAACTCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CCA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTGTTTTTCATTTTTCTTaGCCTCGGTCCAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCVFHFS*PRSRCG
Trigger: CCCACATCTGGACCGAGGCCAAGAAAAATGAAAAAC...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR TCA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCTCCTTGATGCCTTTGTaGTCTGTAAAATTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: FVFELVISMNLTSEASCSSLMPL*SVKFWS
Trigger: ACTCCAAAATTTTACAGATCACAAAGGCATCAAGGA...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371481.9
CDS-3UTR TCA 90 bp TCTGTTACAGGTAACCTCTCAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCTTATCTCTTTGTACCTaGAAACATGGACTGACTAAC +
Preference number: 4 (lower is better)
Translates to: SVTGNLSNLSSFIQWKLILSLCT*KHGLTN
Trigger: GTTAGTCAGTCCATGTTTTCAGGTACAAAGAGATAA...GATGAGCTTCCACTGGATGAAGCTACTGAGATTTGAGAGGTTACCTGTAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CCA 90 bp TTAGGAGTTAGTGATGTGTTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTCACAATGACCAGTCCTaGCACCAAGAAGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LGVSDVFDAVKVKVTATSHNDQS*HQEVQS
Trigger: ACTTTGAACTTCTTGGTGCCAGGACTGGTCATTGTG...AGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAACACATCACTAACTCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp TTCTTCACAGTGCTTATTCGCTCTGTGATGCTATACTATTTATTGACTTGTAGCCAAGCTCCACATCTCTaGATCCAACTGCCTATTCAA +
Preference number: 4 (lower is better)
Translates to: FFTVLIRSVMLYYLLTCSQAPHL*IQLPIQ
Trigger: TTGAATAGGCAGTTGGATGCAGAGATGTGGAGCTTG...GCTACAAGTCAATAAATAGTATAGCATCACAGAGCGAATAAGCACTGTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR TCA 90 bp CAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCTCTCATTCACATAAAGTCACTTGCATTAGTTCTGTaGGTTATGGTAAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: QISVASSSGSSSLIHIKSLALVL*VMVKPF
Trigger: AAAGGGTTTTACCATAACTCACAGAACTAATGCAAG...TGACTTTATGTGAATGAGAGATGAGCTTCCACTGGATGAAGCTACTGAGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR TCA 90 bp TTAGGAGTTAGTGATGTGTTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTCCTGAAAACATGGACTaGCTAACCTTTCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: LGVSDVFDAVKVKVTATSPENMD*LTFPFF
Trigger: GAAAAATGGAAAGGTTAGTCAGTCCATGTTTTCAGG...AGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAACACATCACTAACTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp TTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCAAGGACACAAATGTCTTaGATTAGTTCTGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: FDAVKVKVTATSVTGNLSRTQMS*ISSVSY
Trigger: ATAACTCACAGAACTAATGCAAGACATTTGTGTCCT...TGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR GCA 90 bp TTAGGAGTTAGTGATGTGTTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTTCAGAAGATAAATGCTaGTCCACTTCCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LGVSDVFDAVKVKVTATSSEDKC*STSLFF
Trigger: GAAAAACAAGGAAGTGGAGCAGCATTTATCTTCTGA...AGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAACACATCACTAACTCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CCA 90 bp GATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCAAATTTACTTTGTATAAAATaGAGCTGGTTGCTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: DAVKVKVTATSVTGNLSNLLCIK*SWLLVL
Trigger: AAGCACTAGCAACCAGCTCCATTTTATACAAAGTAA...ATTTGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS GCA 90 bp GGTGCGGTTGGCTTGCTCCAGGCTGCGCAAGGGCGCGTCGCCCGCTaGCCGCGCGCATTCAGGGGACATTCCCGGCGCCTGGCGGCCCGC +
Preference number: 5 (lower is better)
Translates to: GAVGLLQAAQGRVAR*PRAFRGHSRRLAAR
Trigger: GCGGGCCGCCAGGCGCCGGGAATGTCCCCTGAATGCGCGCGGGCAGCGGGCGACGCGCCCTTGCGCAGCCTGGAGCAAGCCAACCGCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS GCA 90 bp GCGCGCCACCAGCACCAGGGCGCACACGTTGCCCAGCAGCGACACTaGAAAGATGAGCACCAGCACGGTTGTCTCCACCGCGGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: ARHQHQGAHVAQQRH*KDEHQHGCLHRGQH
Trigger: GTGCTGGCCGCGGTGGAGACAACCGTGCTGGTGCTCATCTTTGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGGTGCTGGTGGCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS TCA 90 bp CCAGCACCAGGGCGCACACGTTGCCCAGCAGCGACACTGCAAAGATaGGCACCAGCACGGTTGTCTCCACCGCGGCCAGCACCAGCCGGT +
Preference number: 5 (lower is better)
Translates to: PAPGRTRCPAATLQR*APARLSPPRPAPAG
Trigger: ACCGGCTGGTGCTGGCCGCGGTGGAGACAACCGTGCTGGTGCTCATCTTTGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGGTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS-3UTR CAA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGGCTGAGGCGGGAGGATaGCTTGAGCCAAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVAEAGG*LEPRHL
Trigger: CAAATGCCTTGGCTCAAGCAATCCTCCCGCCTCAGC...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGCCAACCTCCAGGGGCTaGGAGAACAGAATAAACTCC +
Preference number: 5 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVPTSRG*ENRINS
Trigger: GGAGTTTATTCTGTTCTCCAAGCCCCTGGAGGTTGG...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp GGCATCTCTGCTGGATGCGTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACGGCGCCGGGGAGCCGTaGCGGGACGACTCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: GISAGCVRSKPLLNSLSNGAGEP*RDDSEE
Trigger: TTCTTCCGAGTCGTCCCGCAACGGCTCCCCGGCGCC...GTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp GGCATCTCTGCTGGATGCGTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACGGAAAGCGGGTGCGGTaGGCTTGCTCCAGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: GISAGCVRSKPLLNSLSNGKRVR*ACSRLR
Trigger: GCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTCC...GTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGGGAAAGCGGGTGCGGTaGGCTTGCTCCAGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: PITTIAPVPFSSQCLFALGKRVR*ACSRLR
Trigger: GCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTCC...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTCTTGAGCCAAGGCATTaGAGGCTTCAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: QLTGPSRVPLISALKAVPLEPRH*RLQGAV
Trigger: CACGGCTCCCTGAAGCCTCAAATGCCTTGGCTCAAG...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTAGCCGGTGGTCGCCCTaGACGTCGGAGAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPISRWSP*TSEKKG
Trigger: TCCCTTCTTCTCCGACGTCAAGGGCGACCACCGGCT...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGTCCGCGCAGAAGAGGTaGAGTACCAGGCAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: PITTIAPVPFSSQCLFALSAQKR*STRQAV
Trigger: GACTGCCTGCCTGGTACTCAACCTCTTCTGCGCGGA...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCGGCGCCGGGGAGCCGTaGCGGGACGACTCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FVFELVISMNLTSEASCSGAGEP*RDDSEE
Trigger: TTCTTCCGAGTCGTCCCGCAACGGCTCCCCGGCGCC...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCACCAGGGCGCACACGTaGCCCAGCAGCGACACTGCA +
Preference number: 5 (lower is better)
Translates to: FTQVALSCRLPFDPICHSTRAHT*PSSDTA
Trigger: TGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGGT...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGATTCTTCAATTGCTCTaGACATCAACGAATGATCCT +
Preference number: 5 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVILQLL*TSTNDP
Trigger: AGGATCATTCGTTGATGTCAAGAGCAATTGAAGAAT...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGCTTGAGCCAAGGCATTaGAGGCTTCAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: PITTIAPVPFSSQCLFALLEPRH*RLQGAV
Trigger: CACGGCTCCCTGAAGCCTCAAATGCCTTGGCTCAAG...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp ACCAGGCCCCGTGCTGCTGTGCATTCCAGCCACTGGCCCAGCCTCCAAGTGGTGAACTGCCTATTCAATTaGGAAGTCTCACTGAGATTT +
Preference number: 5 (lower is better)
Translates to: TRPRAAVHSSHWPSLQVVNCLFN*EVSLRF
Trigger: AAATCTCAGTGAGACTTCCAAATTGAATAGGCAGTT...CACCACTTGGAGGCTGGGCCAGTGGCTGGAATGCACAGCAGCACGGGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTCACACAGGTGGCCCTTTCTTGTCGCTTACCTTTTGATCCAATTTGTCACTCCAGCCGGTGGTCGCCCTaGACGTCGGAGAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: FTQVALSCRLPFDPICHSSRWSP*TSEKKG
Trigger: TCCCTTCTTCTCCGACGTCAAGGGCGACCACCGGCT...GGAGTGACAAATTGGATCAAAAGGTAAGCGACAAGAAAGGGCCACCTGTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCACCAGGGCGCACACGTaGCCCAGCAGCGACACTGCA +
Preference number: 5 (lower is better)
Translates to: FVFELVISMNLTSEASCSTRAHT*PSSDTA
Trigger: TGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGGT...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCTCTCATTCACATAAAGTCAGGCGCCGGGGAGCCGTaGCGGGACGACTCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: QISVASSSGSSSLIHIKSGAGEP*RDDSEE
Trigger: TTCTTCCGAGTCGTCCCGCAACGGCTCCCCGGCGCC...TGACTTTATGTGAATGAGAGATGAGCTTCCACTGGATGAAGCTACTGAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CAA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGCTGAGGCGGGAGGATaGCTTGAGCCAAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLAEAGG*LEPRHL
Trigger: CAAATGCCTTGGCTCAAGCAATCCTCCCGCCTCAGC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TCAGCATTAAAGGCAGTGCCTAGTGCAGAGGAGGCTCCATCAATAGTCGGCTTAGAGTCACGACAGCTCTaGCATCCAGGAGGTGTTCCG +
Preference number: 5 (lower is better)
Translates to: SALKAVPSAEEAPSIVGLESRQL*HPGGVP
Trigger: CGGAACACCTCCTGGATGCAAGAGCTGTCGTGACTC...TAAGCCGACTATTGATGGAGCCTCCTCTGCACTAGGCACTGCCTTTAATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371483.8
CDS-3UTR CAA 90 bp TTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCAGGAAAGCGGGTGCGGTaGGCTTGCTCCAGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: FDAVKVKVTATSVTGNLSGKRVR*ACSRLR
Trigger: GCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTCC...TGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CAA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGAATGATCCTAAACCCTaGCGAGTCCAAGGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLNDPKP*RVQGRA
Trigger: TGCCCTACCTTGGACTCGCAAGGGTTTAGGATCATT...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGGCCGTGATTGTGCCGTaGCACTCCAGCCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLAVIVP*HSSLGI
Trigger: AATGCCCAGGCTGGAGTGCAACGGCACAATCACGGC...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTATGCTATACTATTTATaGACTTGTAGCCAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: QLTGPSRVPLISALKAVPMLYYL*TCSQAW
Trigger: CCACGCCTGGCTACAAGTCAATAAATAGTATAGCAT...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTTGATGCTGTGAAGGTTAAGGTAACAGCAACTTCTGTTACAGGTAACCTCTCAACCAGGGCGCACACGTaGCCCAGCAGCGACACTGCA +
Preference number: 5 (lower is better)
Translates to: FDAVKVKVTATSVTGNLSTRAHT*PSSDTA
Trigger: TGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGGT...TGAGAGGTTACCTGTAACAGAAGTTGCTGTTACCTTAACCTTCACAGCATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CAA 90 bp ACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTCCCAGATGACCAGGTCTaGCTTGAAGTTCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: TMCISRPKLHISASNCLFPDDQV*LEVLDQ
Trigger: CTGATCCAGAACTTCAAGCAAGACCTGGTCATCTGG...GAATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CTGGCCTCAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCGCTGTGGATGTCTATTaGCATAGGTTCATTTTCTTA +
Preference number: 5 (lower is better)
Translates to: LASTDRPQPGTPHLSIKGAVDVY*HRFIFL
Trigger: TAAGAAAATGAACCTATGCAAATAGACATCCACAGC...GCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTGAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCATGACCAGGTCTTGCTaGAAGTTCTGGATCAGGATG +
Preference number: 5 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTMTRSC*KFWIRM
Trigger: CATCCTGATCCAGAACTTCAAGCAAGACCTGGTCAT...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CAACTGACAGGCCCCAGCCGGGTACCCCTCATCTCAGCATTAAAGGCAGTGCCTATTCTTCAATTGCTCTaGACATCAACGAATGATCCT +
Preference number: 5 (lower is better)
Translates to: QLTGPSRVPLISALKAVPILQLL*TSTNDP
Trigger: AGGATCATTCGTTGATGTCAAGAGCAATTGAAGAAT...AGGCACTGCCTTTAATGCTGAGATGAGGGGTACCCGGCTGGGGCCTGTCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CAAATCTCAGTAGCTTCATCCAGTGGAAGCTCATCTCTCATTCACATAAAGTCATCCGCGCAGAAGAGGTaGAGTACCAGGCAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: QISVASSSGSSSLIHIKSSAQKR*STRQAV
Trigger: GACTGCCTGCCTGGTACTCAACCTCTTCTGCGCGGA...TGACTTTATGTGAATGAGAGATGAGCTTCCACTGGATGAAGCTACTGAGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CAA 90 bp AACAATGTGCATCTCCAGGCCCAAGCTCCACATCTCTGCATCCAACTGCCTATTATGACCAGGTCTTGCTaGAAGTTCTGGATCAGGATG +
Preference number: 5 (lower is better)
Translates to: NNVHLQAQAPHLCIQLPIMTRSC*KFWIRM
Trigger: CATCCTGATCCAGAACTTCAAGCAAGACCTGGTCAT...AATAGGCAGTTGGATGCAGAGATGTGGAGCTTGGGCCTGGAGATGCACATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp GAATCTGACTTCAGAAGCAAGCTGCTCCAGAAACTGCATAAGCAGTCACTACTGCCAGATGACCAGGTCTaGCTTGAAGTTCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: ESDFRSKLLQKLHKQSLLPDDQV*LEVLDQ
Trigger: CTGATCCAGAACTTCAAGCAAGACCTGGTCATCTGG...CAGTAGTGACTGCTTATGCAGTTTCTGGAGCAGCTTGCTTCTGAAGTCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CCCATCACTACCATAGCCCCCGTCCCATTTTCTTCACAGTGCTTATTCGCTCTGATGCTATACTATTTATaGACTTGTAGCCAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: PITTIAPVPFSSQCLFALMLYYL*TCSQAW
Trigger: CCACGCCTGGCTACAAGTCAATAAATAGTATAGCAT...CAGAGCGAATAAGCACTGTGAAGAAAATGGGACGGGGGCTATGGTAGTGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp GGCATCTCTGCTGGATGCGTCAGGAGTAAACCACTCCTGAACTCACTCTCAAACCTTGTCGCTTACCTTTaGATCCAATTTGTCACTCCT +
Preference number: 5 (lower is better)
Translates to: GISAGCVRSKPLLNSLSNLVAYL*IQFVTP
Trigger: AGGAGTGACAAATTGGATCAAAAGGTAAGCGACAAG...GTTTGAGAGTGAGTTCAGGAGTGGTTTACTCCTGACGCATCCAGCAGAGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCCTTGTCGCTTACCTTTaGATCCAATTTGTCACTCCT +
Preference number: 5 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTLVAYL*IQFVTP
Trigger: AGGAGTGACAAATTGGATCAAAAGGTAAGCGACAAG...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCCCAACCTCCAGGGGCTaGGAGAACAGAATAAACTCC +
Preference number: 5 (lower is better)
Translates to: FVFELVISMNLTSEASCSPTSRG*ENRINS
Trigger: GGAGTTTATTCTGTTCTCCAAGCCCCTGGAGGTTGG...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTTGTCTTCGAGCTTGTGATATCCATGAATCTGACTTCAGAAGCAAGCTGCTCCAATGATCCTAAACCCTaGCGAGTCCAAGGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: FVFELVISMNLTSEASCSNDPKP*RVQGRA
Trigger: TGCCCTACCTTGGACTCGCAAGGGTTTAGGATCATT...GGAGCAGCTTGCTTCTGAAGTCAGATTCATGGATATCACAAGCTCGAAGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTCTTCACAGTGCTTATTCGCTCTGTGATGCTATACTATTTATTGACTTGTAGCGCCGTGATTGTGCCGTaGCACTCCAGCCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: FFTVLIRSVMLYYLLTCSAVIVP*HSSLGI
Trigger: AATGCCCAGGCTGGAGTGCAACGGCACAATCACGGC...GCTACAAGTCAATAAATAGTATAGCATCACAGAGCGAATAAGCACTGTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp GAGAGGGCCATGGCTGTCTGGTTCACCACTGTATTCCTAGCACAAAGGACACTGAGCAACAAAGATTTGTaGAACACCTACTATACACCA +
Preference number: 5 (lower is better)
Translates to: ERAMAVWFTTVFLAQRTLSNKDL*NTYYTP
Trigger: TGGTGTATAGTAGGTGTTCAACAAATCTTTGTTGCT...CAGTGTCCTTTGTGCTAGGAATACAGTGGTGAACCAGACAGCCATGGCCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CAGGGTAATCTTTGCACACATTCATCAGGTCACGTCAGCCTCCAGTTGCCAACCGCTGTGGATGTCTATTaGCATAGGTTCATTTTCTTA +
Preference number: 5 (lower is better)
Translates to: QGNLCTHSSGHVSLQLPTAVDVY*HRFIFL
Trigger: TAAGAAAATGAACCTATGCAAATAGACATCCACAGC...GGTTGGCAACTGGAGGCTGACGTGACCTGATGAATGTGTGCAAAGATTACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp CACTTCCTTGTTTTTCATTTTTCTTGGCCTCGGTCCAGATGTGGGTATAAATGTTGTTTTTCATTTTTCTaGGCCTCGGTCCAGATGTGG +
Preference number: 5 (lower is better)
Translates to: HFLVFHFSWPRSRCGYKCCFSFF*ASVQMW
Trigger: CCACATCTGGACCGAGGCCAAGAAAAATGAAAAACA...ACATTTATACCCACATCTGGACCGAGGCCAAGAAAAATGAAAAACAAGGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000604414.1
CDS-3UTR CAA 90 bp TTCTTCACAGTGCTTATTCGCTCTGTGATGCTATACTATTTATTGACTTGTAGCAACTGCCTATTCAATTaGGAAGTCTCACTGAGATTT +
Preference number: 5 (lower is better)
Translates to: FFTVLIRSVMLYYLLTCSNCLFN*EVSLRF
Trigger: AAATCTCAGTGAGACTTCCAAATTGAATAGGCAGTT...GCTACAAGTCAATAAATAGTATAGCATCACAGAGCGAATAAGCACTGTGAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS-3UTR CAA 90 bp TTCTTCACAGTGCTTATTCGCTCTGTGATGCTATACTATTTATTGACTTGTAGCAGCAACAAAGATTTGTaGAACACCTACTATACACCA +
Preference number: 5 (lower is better)
Translates to: FFTVLIRSVMLYYLLTCSSNKDL*NTYYTP
Trigger: TGGTGTATAGTAGGTGTTCAACAAATCTTTGTTGCT...GCTACAAGTCAATAAATAGTATAGCATCACAGAGCGAATAAGCACTGTGAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS GCA 72 bp GCCCGCCGCCCAGGACCCCGCACGCCGCGCTGCAGGTaGACGATGCACACCATGCGCTCCAGGCTGACCGCG +
Preference number: 6 (lower is better)
Translates to: ARRPGPRTPRCR*TMHTMRSRLTA
Trigger: CGCGGTCAGCCTGGAGCGCATGGTGTGCATCGTGCACCTGCAGCGCGGCGTGCGGGGTCCTGGGCGGCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS GCA 72 bp GGCTTGCTCCAGGCTGCGCAAGGGCGCGTCGCCCGCTaGCCGCGCGCATTCAGGGGACATTCCCGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: GLLQAAQGRVAR*PRAFRGHSRRL
Trigger: CAGGCGCCGGGAATGTCCCCTGAATGCGCGCGGGCAGCGGGCGACGCGCCCTTGCGCAGCCTGGAGCAAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS CAA 90 bp CGGTGGTCGCCCTTGACGTCGGAGAAGAAGGGAAAGCGGGTGCGGTaGGCTTGCTCCAGGCTGCGCAAGGGCGCGTCGCCCGCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: RWSPLTSEKKGKRVR*ACSRLRKGASPAAR
Trigger: GCGGGCAGCGGGCGACGCGCCCTTGCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTCCCTTCTTCTCCGACGTCAAGGGCGACCACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS GCA 72 bp AGAAGGGAAAGCGGGTGCGGTTGGCTTGCTCCAGGCTaGGCAAGGGCGCGTCGCCCGCTGCCCGCGCGCATT +
Preference number: 6 (lower is better)
Translates to: RRESGCGWLAPG*ARARRPLPARI
Trigger: AATGCGCGCGGGCAGCGGGCGACGCGCCCTTGCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTCCCTTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS CAA 90 bp GCGCCGCGGCGTCGTCGGCGCGCCACCAGCACCAGGGCGCACACGTaGCCCAGCAGCGACACTGCAAAGATGAGCACCAGCACGGTTGTC +
Preference number: 6 (lower is better)
Translates to: APRRRRRATSTRAHT*PSSDTAKMSTSTVV
Trigger: GACAACCGTGCTGGTGCTCATCTTTGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGGTGCTGGTGGCGCGCCGACGACGCCGCGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS CAA 72 bp CCCTTGACGTCGGAGAAGAAGGGAAAGCGGGTGCGGTaGGCTTGCTCCAGGCTGCGCAAGGGCGCGTCGCCC +
Preference number: 6 (lower is better)
Translates to: PLTSEKKGKRVR*ACSRLRKGASP
Trigger: GGGCGACGCGCCCTTGCGCAGCCTGGAGCAAGCCAACCGCACCCGCTTTCCCTTCTTCTCCGACGTCAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS CCA 72 bp AGCACGGTTGTCTCCACCGCGGCCAGCACCAGCCGGTaGTCGCCCTTGACGTCGGAGAAGAAGGGAAAGCGG +
Preference number: 6 (lower is better)
Translates to: STVVSTAASTSR*SPLTSEKKGKR
Trigger: CCGCTTTCCCTTCTTCTCCGACGTCAAGGGCGACCACCGGCTGGTGCTGGCCGCGGTGGAGACAACCGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS TCA 72 bp GGGCGCACACGTTGCCCAGCAGCGACACTGCAAAGATaGGCACCAGCACGGTTGTCTCCACCGCGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: GRTRCPAATLQR*APARLSPPRPA
Trigger: TGCTGGCCGCGGTGGAGACAACCGTGCTGGTGCTCATCTTTGCAGTGTCGCTGCTGGGCAACGTGTGCGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS GCA 72 bp CAGCACCAGGGCGCACACGTTGCCCAGCAGCGACACTaGAAAGATGAGCACCAGCACGGTTGTCTCCACCGC +
Preference number: 6 (lower is better)
Translates to: QHQGAHVAQQRH*KDEHQHGCLHR
Trigger: GCGGTGGAGACAACCGTGCTGGTGCTCATCTTTGCAGTGTCGCTGCTGGGCAACGTGTGCGCCCTGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS CAA 72 bp GCAAATCGAAATTTCCTGGTCGGCGCCGGGGAGCCGTaGCGGGACGACTCGGAAGAAGACGCAGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: ANRNFLVGAGEP*RDDSEEDAERQ
Trigger: CTGCCTCTCTGCGTCTTCTTCCGAGTCGTCCCGCAACGGCTCCCCGGCGCCGACCAGGAAATTTCGATTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS GCA 72 bp CAAATCGAAATTTCCTGGTCGGCGCCGGGGAGCCGTTaGGGGACGACTCGGAAGAAGACGCAGAGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: QIEISWSAPGSR*GTTRKKTQRGR
Trigger: TCTGCCTCTCTGCGTCTTCTTCCGAGTCGTCCCGCAACGGCTCCCCGGCGCCGACCAGGAAATTTCGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS GCA 72 bp ACGAGATCTCTCCAGGAATGGTGGGCCAAATCAGTGTaGAAATCGAAATTTCCTGGTCGGCGCCGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: TRSLQEWWAKSV*KSKFPGRRRGA
Trigger: GGCTCCCCGGCGCCGACCAGGAAATTTCGATTTGCACACTGATTTGGCCCACCATTCCTGGAGAGATCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS GCA 72 bp ACCCAGAAGAAGAGGGACGGCCAGATGACCAGGTCTTaGTTGAAGTTCTGGATCAGGATGAGGAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: TQKKRDGQMTRS*LKFWIRMRRMV
Trigger: CACCATCCTCCTCATCCTGATCCAGAACTTCAAGCAAGACCTGGTCATCTGGCCGTCCCTCTTCTTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS CAA 72 bp CACCCAGAAGAAGAGGGACGGCCAGATGACCAGGTCTaGCTTGAAGTTCTGGATCAGGATGAGGAGGATGGT +
Preference number: 6 (lower is better)
Translates to: HPEEEGRPDDQV*LEVLDQDEEDG
Trigger: ACCATCCTCCTCATCCTGATCCAGAACTTCAAGCAAGACCTGGTCATCTGGCCGTCCCTCTTCTTCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS CAA 72 bp CAGAAGAAGAGGGACGGCCAGATGACCAGGTCTTGCTaGAAGTTCTGGATCAGGATGAGGAGGATGGTGATG +
Preference number: 6 (lower is better)
Translates to: QKKRDGQMTRSC*KFWIRMRRMVM
Trigger: CATCACCATCCTCCTCATCCTGATCCAGAACTTCAAGCAAGACCTGGTCATCTGGCCGTCCCTCTTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371481.9
ENST00000371483.8
CDS CCA 72 bp CAAAAGAGACATCCCACGAGATCTCTCCAGGAATGGTaGGCCAAATCAGTGTGCAAATCGAAATTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: QKRHPTRSLQEW*AKSVCKSKFPG
Trigger: ACCAGGAAATTTCGATTTGCACACTGATTTGGCCCACCATTCCTGGAGAGATCTCGTGGGATGTCTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371481.9
ENST00000371483.8
ENST00000604414.1
CDS CCA 72 bp ACAGGTAACCTCTCAAATCTCAGTAGCTTCATCCAGTaGAAGCTCATCTCTCATTCACATAAAGTCAGTCAC +
Preference number: 6 (lower is better)
Translates to: TGNLSNLSSFIQ*KLISHSHKVSH
Trigger: GTGACTGACTTTATGTGAATGAGAGATGAGCTTCCACTGGATGAAGCTACTGAGATTTGAGAGGTTACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604414.1