RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FEZF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000153266

Ensembl transcript IDs: ENST00000283268.8, ENST00000475839.1, ENST00000486811.5

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACGGGCCACGAGTTTGCTaGCAGTCATCGAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: LHGCIKMARGAALFWGAHGPRVC*QSSRKH
Trigger: ATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR-3UTR GCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTTGGGGGCCACGAGTTTaGTGCCAGTCATCGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIWGPRV*CQSSRK
Trigger: TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCA...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR-3UTR GCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTGGGCCACGAGTTTGCTaGCAGTCATCGAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIGPRVC*QSSRKH
Trigger: ATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGGGCCACGAGTTTGCTaGCAGTCATCGAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: LVQEDLHGCIKMARGAALGPRVC*QSSRKH
Trigger: ATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR-3UTR GCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGGGGTTAAAACTGGCTaGCCCAGGAGAAGCGGAGGC +
Preference number: 2 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAGVKTG*PRRSGG
Trigger: GCCTCCGCTTCTCCTGGGGCAGCCAGTTTTAACCCC...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAATGGGGGCCACGAGTTTaGTGCCAGTCATCGAGGAAA +
Preference number: 2 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKWGPRV*CQSSRK
Trigger: TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCA...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR-3UTR CCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTCTGAATATACAAAGGTaGGGGCCACGAGTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMALNIQR*GPRVCC
Trigger: GCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAG...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR-3UTR CCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAACTGAATATACAAAGGTaGGGGCCACGAGTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKLNIQR*GPRVCC
Trigger: GCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAG...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR CAA 90 bp GATTTAAATAAGTTTCCTGAATATACAAAGGTGGGGGCCACGAGTTaGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATGC +
Preference number: 2 (lower is better)
Translates to: DLNKFPEYTKVGATS*LPVIEETFSFPKIC
Trigger: GCATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAAACTTATTTAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR-3UTR CAA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTGTGGGGGCCACGAGTTaGCTGCCAGTCATCGAGGAA +
Preference number: 3 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIVGATS*LPVIEE
Trigger: TTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR GCA 72 bp AGTTTCCTGAATATACAAAGGTGGGGGCCACGAGTTTaGTGCCAGTCATCGAGGAAACATTTAGCTTTCCAA +
Preference number: 3 (lower is better)
Translates to: SFLNIQRWGPRV*CQSSRKHLAFQ
Trigger: TTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
3UTR GCA 72 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTaGCAGTCATCGAGGAAACATTTAGCTTTCCAAAAA +
Preference number: 3 (lower is better)
Translates to: FLNIQRWGPRVC*QSSRKHLAFQK
Trigger: TTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGGCTTGCTGTGGCCCTTaGCGCCTCCGCGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWACCGP*RLRARQ
Trigger: CTGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGC...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACGGCGCCGCGCTCTTCTaGGGCGCTCACGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHGAALF*GAHGDR
Trigger: CCTGTCACCGTGAGCGCCCCAGAAGAGCGCGGCGCC...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGAAAGAGCTTGGGGTaGGCAGCCAGGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHRKSLG*AARAAG
Trigger: CCCCGCCGCCCTGGCTGCTCACCCCAAGCTCTTTCT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGTAGAGCGAGCCGCTaGCCGGCAGCCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSRASR*PAAPQP
Trigger: AGGCTGTGGGGCTGCCGGCCAGCGGCTCGCTCTACT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGTAGAGCGAGCCGCTaGCCGGCAGCCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWSRASR*PAAPQP
Trigger: AGGCTGTGGGGCTGCCGGCCAGCGGCTCGCTCTACT...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACGGCCCAGCTCGGCCTTaGAGCACACGCCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHGPARP*STRHSW
Trigger: CCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCC...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGTTTTGCACAAGCCGCTaGCGCCGCACACTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWFCTSR*RRTLGP
Trigger: GGGCCCCAGTGTGCGGCGCCAGCGGCTTGTGCAAAA...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTGGCGCCGCGCTCTTCTaGGGCGCTCACGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIGAALF*GAHGDR
Trigger: CCTGTCACCGTGAGCGCCCCAGAAGAGCGCGGCGCC...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATCACTTGAAGTGGAATaGCATGGGCGGCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGSLEVE*HGRRRG
Trigger: GCCGCGCCGCCGCCCATGTCATTCCACTTCAAGTGA...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283268.8
CDS-3UTR TCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACGCGGCGAGCAGAGGTTaGGCAGTTTCTTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHAASRG*AVSCPG
Trigger: GCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGC...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGCGGCGAGCAGAGGTTaGGCAGTTTCTTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGAASRG*AVSCPG
Trigger: GCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGC...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTGGAAGAGGTGGCCGCTaGGGAGCTCAGACGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIGRGGR*GAQTAG
Trigger: ACCCGCCGTCTGAGCTCCTCAGCGGCCACCTCTTCC...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTCGGGGGCCTGCGCATTaGGGAGGCCAGACGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIRGPAH*GGQTGR
Trigger: TCTTCCCGTCTGGCCTCCTCAATGCGCAGGCCCCCG...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTAGAAAGAGCTTGGGGTaGGCAGCCAGGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIRKSLG*AARAAG
Trigger: CCCCGCCGCCCTGGCTGCTCACCCCAAGCTCTTTCT...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGTTTCTTGCCCTGGCTaGCGTCCGCCTCTAGCGCTC +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGVSCPG*RPPLAL
Trigger: GAGCGCTAGAGGCGGACGGCAGCCAGGGCAAGAAAC...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTCCAGTGTCTTGGAAGTaGCCGGCGACGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIPVSWK*PATLRR
Trigger: GCGCCGGAGCGTCGCCGGCCACTTCCAAGACACTGG...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGCCAGCAGAAAGAGCTTaGGGTGAGCAGCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWPAERA*GEQPGR
Trigger: CCGCCCTGGCTGCTCACCCCAAGCTCTTTCTGCTGG...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACCCAGCAGAAAGAGCTTaGGGTGAGCAGCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHPAERA*GEQPGR
Trigger: CCGCCCTGGCTGCTCACCCCAAGCTCTTTCTGCTGG...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGTGCACACGAACGGTCTaGCTCCGGTGTGGACCGGCA +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWCTRTV*LRCGPA
Trigger: TGCCGGTCCACACCGGAGCCAGACCGTTCGTGTGCA...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGGCCTGCAGAGCGTGCTaGCCTGGCGAAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWACRAC*PGESLC
Trigger: GCAAAGGCTTTCGCCAGGCCAGCACGCTCTGCAGGC...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACTGTGCCTGCAGAGCGTaGTGGCCTGGCGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHCACRA*WPGESL
Trigger: AAGGCTTTCGCCAGGCCAGCACGCTCTGCAGGCACA...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGTGTGCCTGCAGAGCGTaGTGGCCTGGCGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWCACRA*WPGESL
Trigger: AAGGCTTTCGCCAGGCCAGCACGCTCTGCAGGCACA...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACGGGGTTAAAACTGGCTaGCCCAGGAGAAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHGVKTG*PRRSGG
Trigger: GCCTCCGCTTCTCCTGGGGCAGCCAGTTTTAACCCC...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTAAGCCGAGCTTGCCATaGCGCGCGGAGCTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIKPSLP*RAELSR
Trigger: TCGGCTCAGCTCCGCGCGCCATGGCAAGCTCGGCTT...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGCAGTTTCTTGCCCTaGCTGCCGTCCGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSSFLP*LPSASS
Trigger: GCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGACCAGGCCGGCCAGCTTaGCGTTCTCCAGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGPGRPA*RSPAER
Trigger: TCTTTCTGCTGGAGAACGCCAAGCTGGCCGGCCTGG...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACATCTGCGGAGCCTCCTaGCAGCTTGCTGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHICGAS*QLAVAL
Trigger: AAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGAT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGCCGACGTCTTGGCCATaGTGCGCTCGATGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWPTSWP*CARWKR
Trigger: CCTTTTCCATCGAGCGCATCATGGCCAAGACGTCGG...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAGCTTGCTGTGGCCCTTaGCGCCTCCGCGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKACCGP*RLRARQ
Trigger: CTGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGC...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTGCGTGGAGCTGCGGTTaGACGCTTTGCCGCACTGGT +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIAWSCG*TLCRTG
Trigger: ACCAGTGCGGCAAAGCGTTCAACCGCAGCTCCACGC...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAAGGGCGGCGGGGGCCTaGGCATTGAGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKRAAGA*ALRRPD
Trigger: GTCTGGCCTCCTCAATGCGCAGGCCCCCGCCGCCCT...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAAGGGCGGCGGGGGCCTaGGCATTGAGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKRAAGA*ALRRPD
Trigger: GTCTGGCCTCCTCAATGCGCAGGCCCCCGCCGCCCT...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACTTTGGGCTTGCCATCTaGGGAGCCTCCTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHFGLAI*GASWQL
Trigger: AAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAAA...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGCGTGGATGCGGATATaGGTGTTGAGCGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGAWMRI*VLSVEL
Trigger: CAGCTCCACGCTCAACACGCATATCCGCATCCACGC...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCCCTAGTCAGGTCCTTTaGGGAGGGGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALPSQVL*GGGSRA
Trigger: GGCCCTGCTGCCCCCTCCGCAAAGGACCTGACTAGG...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACCAGTGTCTTGGAAGTaGCCGGCGACGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETPVSWK*PATLRR
Trigger: GCGCCGGAGCGTCGCCGGCCACTTCCAAGACACTGG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAAAAGGCCAGTGTCTTaGAAGTGGCCGGCGACGCTC +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWKRPVS*KWPATL
Trigger: GAGCGTCGCCGGCCACTTCCAAGACACTGGCCTTTT...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTTGCACACGAACGGTCTaGCTCCGGTGTGGACCGGCA +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWICTRTV*LRCGPA
Trigger: TGCCGGTCCACACCGGAGCCAGACCGTTCGTGTGCA...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAGGAAGAGGTGGCCGCTaGGGAGCTCAGACGGCGGGT +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKGRGGR*GAQTAG
Trigger: ACCCGCCGTCTGAGCTCCTCAGCGGCCACCTCTTCC...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACGGGGGCCTGCGCATTaGGGAGGCCAGACGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKRGPAH*GGQTGR
Trigger: TCTTCCCGTCTGGCCTCCTCAATGCGCAGGCCCCCG...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGACGCACACCTCGCAGGTaGAGTTTTTGGGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGRTPRR*SFWACH
Trigger: ATGGCAAGCCCAAAAACTTCACCTGCGAGGTGTGCG...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACCGCACACCTCGCAGGTaGAGTTTTTGGGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHRTPRR*SFWACH
Trigger: ATGGCAAGCCCAAAAACTTCACCTGCGAGGTGTGCG...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACGCCCGCCCGGAGGCTaGTTTTCCAGAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETRPPGG*FSRAPS
Trigger: ACTCGGAGCTCTGGAAAAGCAGCCTCCGGGCGGGCG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGCCTGGCGAAAGCCTTTaGCGCAGACTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWPGESL*RRLCTR
Trigger: TCGTGTGCAAAGTCTGCGGCAAAGGCTTTCGCCAGG...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTTGTGCCTGCAGAGCGTaGTGGCCTGGCGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWICACRA*WPGESL
Trigger: AAGGCTTTCGCCAGGCCAGCACGCTCTGCAGGCACA...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACCTAGTCAGGTCCTTTaGGGAGGGGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETPSQVL*GGGSRA
Trigger: GGCCCTGCTGCCCCCTCCGCAAAGGACCTGACTAGG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTAGCAGTTTCTTGCCCTaGCTGCCGTCCGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWISSFLP*LPSASS
Trigger: GCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCT...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAAGCACACGCCACAGTTaGTTTTGCACAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGSTRHS*FCTSRW
Trigger: CCAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCT...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGCACACGCCACAGTTaGTTTTGCACAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSTRHS*FCTSRW
Trigger: CCAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGCACACGCCACAGTTaGTTTTGCACAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWSTRHS*FCTSRW
Trigger: CCAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCT...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTCCAGGCCGGCCAGCTTaGCGTTCTCCAGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIPGRPA*RSPAER
Trigger: TCTTTCTGCTGGAGAACGCCAAGCTGGCCGGCCTGG...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTCCGACGTCTTGGCCATaGTGCGCTCGATGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIPTSWP*CARWKR
Trigger: CCTTTTCCATCGAGCGCATCATGGCCAAGACGTCGG...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGAGCTCCGAGTAACTaGGCAGTGTCTTTGACGGCA +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWRAPSN*AVSLTA
Trigger: TGCCGTCAAAGACACTGCTCAGTTACTCGGAGCTCT...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACAGCGTGGAGCTGCGGTTaGACGCTTTGCCGCACTGGT +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETAWSCG*TLCRTG
Trigger: ACCAGTGCGGCAAAGCGTTCAACCGCAGCTCCACGC...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACGCCACAGTTGGTTTTaGACAAGCCGCTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETRHSWF*TSRWRR
Trigger: GCGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAGGCCCAGCTCGGCCTTaGAGCACACGCCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKGPARP*STRHSW
Trigger: CCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCC...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGTAGCTCTCAGCTCTaGACTGTCCTAGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSSSQL*TVLVRS
Trigger: GGACCTGACTAGGACAGTGCAGAGCTGAGAGCTACT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGGGGTTAAAACTGGCTaGCCCAGGAGAAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALGVKTG*PRRSGG
Trigger: GCCTCCGCTTCTCCTGGGGCAGCCAGTTTTAACCCC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAAAGCCGAGCTTGCCATaGCGCGCGGAGCTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKKPSLP*RAELSR
Trigger: TCGGCTCAGCTCCGCGCGCCATGGCAAGCTCGGCTT...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCAGCAGTTTCTTGCCCTaGCTGCCGTCCGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALSSFLP*LPSASS
Trigger: GCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACAGAGCGTGCTGGCCTaGCGAAAGCCTTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETQSVLA*RKPLPQ
Trigger: CTGCGGCAAAGGCTTTCGCCAGGCCAGCACGCTCTG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCCCGACGTCTTGGCCATaGTGCGCTCGATGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALPTSWP*CARWKR
Trigger: CCTTTTCCATCGAGCGCATCATGGCCAAGACGTCGG...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAGCGGCGAGCAGAGGTTaGGCAGTTTCTTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKAASRG*AVSCPG
Trigger: GCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGC...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAGCGTGGAGCTGCGGTTaGACGCTTTGCCGCACTGGT +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKAWSCG*TLCRTG
Trigger: ACCAGTGCGGCAAAGCGTTCAACCGCAGCTCCACGC...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACCACCACCAAGGAGATaGGTTCCGAGCCATGCAGCG +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETPPPRR*VPSHAA
Trigger: CGCTGCATGGCTCGGAACGCATCTCCTTGGTGGTGG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTTTCCTTCAGTACCTaGTCCAGCGGCGCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALFSFST*SSGAGK
Trigger: CTTGCCGGCGCCGCTGGAGCAGGTACTGAAGGAAAA...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTTGGGCTTGCCATCTaGGGAGCCTCCTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALFGLAI*GASWQL
Trigger: AAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAAA...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTCTTTGCCGCAGACTTTaGACACGAACGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWILCRRL*TRTVWL
Trigger: GAGCCAGACCGTTCGTGTGCAAAGTCTGCGGCAAAG...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGCGTGGATGCGGATATaGGTGTTGAGCGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALAWMRI*VLSVEL
Trigger: CAGCTCCACGCTCAACACGCATATCCGCATCCACGC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACATGGTACATTTGTACTaGTTCTCGCCGCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHMVHLY*FSPLWV
Trigger: GACCCACAGCGGCGAGAAGCAGTACAAATGTACCAT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAATGGTACATTTGTACTaGTTCTCGCCGCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGMVHLY*FSPLWV
Trigger: GACCCACAGCGGCGAGAAGCAGTACAAATGTACCAT...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTAAAAGGAGGCAACTaGCGCCCGCGCTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETLKGGN*RPRSSR
Trigger: CCGAGAGGAGCGCGGGCGCCAGTTGCCTCCTTTTAA...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283268.8
CDS-3UTR CCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCAAAAGGCCAGTGTCTTaGAAGTGGCCGGCGACGCTC +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALKRPVS*KWPATL
Trigger: GAGCGTCGCCGGCCACTTCCAAGACACTGGCCTTTT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACAATCTGCGGAGCCTCCTaGCAGCTTGCTGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETICGAS*QLAVAL
Trigger: AAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGAT...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAGCCTGCAGAGCGTGCTaGCCTGGCGAAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKACRAC*PGESLC
Trigger: GCAAAGGCTTTCGCCAGGCCAGCACGCTCTGCAGGC...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGGGCCCACGCTGTCGTaGAGTTTGCGCACATGTTTC +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALGPTLS*SLRTCF
Trigger: GAAACATGTGCGCAAACTCCACGACAGCGTGGGCCC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATCACATGAAGTCACTTaGAGTGGAATGACATGGGCG +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGSHEVT*SGMTWA
Trigger: CGCCCATGTCATTCCACTTCAAGTGACTTCATGTGA...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283268.8
CDS-3UTR TCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATAGAAAGAGCTTGGGGTaGGCAGCCAGGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYRKSLG*AARAAG
Trigger: CCCCGCCGCCCTGGCTGCTCACCCCAAGCTCTTTCT...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTATGCGTTCCGAGCCATaGAGCGTGTCTCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIMRSEP*SVSLLS
Trigger: TGACAGAAGAGACACGCTGCATGGCTCGGAACGCAT...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR GCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAGCCTGGTTGATGACCTaGGGCTTGATGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKAWLMT*GLMTLP
Trigger: GGGCAGGGTCATCAAGCCGCAGGTCATCAACCAGGC...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCCCTGGCGAAAGCCTTTaGCGCAGACTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALPGESL*RRLCTR
Trigger: TCGTGTGCAAAGTCTGCGGCAAAGGCTTTCGCCAGG...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAGGGGTTAAAACTGGCTaGCCCAGGAGAAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKGVKTG*PRRSGG
Trigger: GCCTCCGCTTCTCCTGGGGCAGCCAGTTTTAACCCC...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATAGGCCGGGGGCACCATaGTCTCCAGGGAAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYRPGAP*SPGKPS
Trigger: GCTCGGCTTCCCTGGAGACCATGGTGCCCCCGGCCT...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACGCACACCTCGCAGGTaGAGTTTTTGGGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETRTPRR*SFWACH
Trigger: ATGGCAAGCCCAAAAACTTCACCTGCGAGGTGTGCG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATCGCCCGCCCGGAGGCTaGTTTTCCAGAGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYRPPGG*FSRAPS
Trigger: ACTCGGAGCTCTGGAAAAGCAGCCTCCGGGCGGGCG...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAATTTTCCTTCAGTACCTaGTCCAGCGGCGCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKFSFST*SSGAGK
Trigger: CTTGCCGGCGCCGCTGGAGCAGGTACTGAAGGAAAA...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAATTTGGGCTTGCCATCTaGGGAGCCTCCTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKFGLAI*GASWQL
Trigger: AAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAAA...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGTGTGGATAATTTTGTaGCTGCAGAGCGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALVWIIL*LQSVLA
Trigger: GGCCAGCACGCTCTGCAGGCACAAAATTATCCACAC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTTGGTGAAAGCCTTTaGCGCAAAATTCGCAGACGA +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGFGESL*RKIRRR
Trigger: TCGTCTGCGAATTTTGCGGCAAAGGCTTTCACCAAA...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACTTTGGTGAAAGCCTTTaGCGCAAAATTCGCAGACGA +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHFGESL*RKIRRR
Trigger: TCGTCTGCGAATTTTGCGGCAAAGGCTTTCACCAAA...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGGGTGGAAGGCCTTGTTaGAGATGGTACATTTGTACT +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWGGRPC*RWYICT
Trigger: AGTACAAATGTACCATCTGCAACAAGGCCTTCCACC...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGCGCTGTCGTGGAGTTTaGGCACATGTTTCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWRCRGV*AHVSLS
Trigger: ACTTAAAGAAACATGTGCGCAAACTCCACGACAGCG...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCAGTAGCTCTCAGCTCTaGACTGTCCTAGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LVQEDLHGCIKMARGAALSSSQL*TVLVRS
Trigger: GGACCTGACTAGGACAGTGCAGAGCTGAGAGCTACT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATAAGCCGAGCTTGCCATaGCGCGCGGAGCTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYKPSLP*RAELSR
Trigger: TCGGCTCAGCTCCGCGCGCCATGGCAAGCTCGGCTT...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGCTGGTTGCATTTATGTaGCTTTTCCTGGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWLVAFM*LFLGVD
Trigger: ATCCACACCCAGGAAAAGCCACATAAATGCAACCAG...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACTCTTCTGTCACATTTTaGTGGCAAACATCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSSVTF*WQTSSP
Trigger: AGGGGAAGATGTTTGCCATCAAAATGTGACAGAAGA...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR TCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACAAGAGCTCCGAGTAACTaGGCAGTGTCTTTGACGGCA +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETRAPSN*AVSLTA
Trigger: TGCCGTCAAAGACACTGCTCAGTTACTCGGAGCTCT...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACTTTGCCGCAGACTTTaGACACGAACGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKLCRRL*TRTVWL
Trigger: GAGCCAGACCGTTCGTGTGCAAAGTCTGCGGCAAAG...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAACCTGGCGAAAGCCTTTaGCGCAGACTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKPGESL*RRLCTR
Trigger: TCGTGTGCAAAGTCTGCGGCAAAGGCTTTCGCCAGG...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATTGCACACGAACGGTCTaGCTCCGGTGTGGACCGGCA +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYCTRTV*LRCGPA
Trigger: TGCCGGTCCACACCGGAGCCAGACCGTTCGTGTGCA...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAAGAGCTCCGAGTAACTaGGCAGTGTCTTTGACGGCA +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKRAPSN*AVSLTA
Trigger: TGCCGTCAAAGACACTGCTCAGTTACTCGGAGCTCT...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGTTAAGTCAAAGTTTCTaGAAAACCCTTTGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWLSQSF*KTLCRK
Trigger: CTTGCGGCAAAGGGTTTTGCAGAAACTTTGACTTAA...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTTCTTCTGTCACATTTTaGTGGCAAACATCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWISSVTF*WQTSSP
Trigger: AGGGGAAGATGTTTGCCATCAAAATGTGACAGAAGA...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR TCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGGAAGAGGTGGCCGCTaGGGAGCTCAGACGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAGRGGR*GAQTAG
Trigger: ACCCGCCGTCTGAGCTCCTCAGCGGCCACCTCTTCC...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTCGGGGGCCTGCGCATTaGGGAGGCCAGACGGGAAGA +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMARGPAH*GGQTGR
Trigger: TCTTCCCGTCTGGCCTCCTCAATGCGCAGGCCCCCG...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGGCTTGCTGTGGCCCTTaGCGCCTCCGCGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWACCGP*RLRARQ
Trigger: CTGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGC...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR TCA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATCTTTTACATTCAGCTaGCATCACATGAAGTCATGT +
Preference number: 4 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGSFTFS*HHMKSC
Trigger: ACATGACTTCATGTGATGTCAGCTGAATGTAAAAGA...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486811.5
CDS-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAAAGGGCGGCGGGGGCCTaGGCATTGAGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKRAAGA*ALRRPD
Trigger: GTCTGGCCTCCTCAATGCGCAGGCCCCCGCCGCCCT...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATTTTTCCTTCAGTACCTaGTCCAGCGGCGCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYFSFST*SSGAGK
Trigger: CTTGCCGGCGCCGCTGGAGCAGGTACTGAAGGAAAA...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATGGTACATTTGTACTaGTTCTCGCCGCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKMVHLY*FSPLWV
Trigger: GACCCACAGCGGCGAGAAGCAGTACAAATGTACCAT...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTAGTAGAGCGAGCCGCTaGCCGGCAGCCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMASRASR*PAAPQP
Trigger: AGGCTGTGGGGCTGCCGGCCAGCGGCTCGCTCTACT...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACAGGCTTTTCCTGGGTGTaGATAATTTTGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETGFSWV*IILCLQ
Trigger: CTGCAGGCACAAAATTATCCACACCCAGGAAAAGCC...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATGGGCCCACGCTGTCGTaGAGTTTGCGCACATGTTTC +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYGPTLS*SLRTCF
Trigger: GAAACATGTGCGCAAACTCCACGACAGCGTGGGCCC...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAACTGAATATACAAAGGTaGGGGCCACGAGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKLNIQR*GPRVCC
Trigger: GCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAG...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACTGAATATACAAAGGTaGGGGCCACGAGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKLNIQR*GPRVCC
Trigger: GCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAG...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGGGCGCCGCGCTCTTCTaGGGCGCTCACGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWGAALF*GAHGDR
Trigger: CCTGTCACCGTGAGCGCCCCAGAAGAGCGCGGCGCC...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR GCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACTTTGCCGCACTGGTTaGATTTATGTGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETLCRTG*IYVAFP
Trigger: AGGAAAAGCCACATAAATGCAACCAGTGCGGCAAAG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACAGGTGGAAGGCCTTGTTaGAGATGGTACATTTGTACT +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETGGRPC*RWYICT
Trigger: AGTACAAATGTACCATCTGCAACAAGGCCTTCCACC...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACGCTGTCGTGGAGTTTaGGCACATGTTTCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETRCRGV*AHVSLS
Trigger: ACTTAAAGAAACATGTGCGCAAACTCCACGACAGCG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCCAGTGTCTTGGAAGTaGCCGGCGACGCTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWPVSWK*PATLRR
Trigger: GCGCCGGAGCGTCGCCGGCCACTTCCAAGACACTGG...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACAAACGCTTTGCCGCACTaGTTGCATTTATGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETNALPH*LHLCGF
Trigger: AAAGCCACATAAATGCAACCAGTGCGGCAAAGCGTT...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTTTCTTGCCCTGGCTaGCGTCCGCCTCTAGCGCTC +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAVSCPG*RPPLAL
Trigger: GAGCGCTAGAGGCGGACGGCAGCCAGGGCAAGAAAC...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAAGGCCCAGCTCGGCCTTaGAGCACACGCCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKGPARP*STRHSW
Trigger: CCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCC...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATGTGTGGATAATTTTGTaGCTGCAGAGCGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYVWIIL*LQSVLA
Trigger: GGCCAGCACGCTCTGCAGGCACAAAATTATCCACAC...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACTTTGCCGCACTGGTTaGATTTATGTGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKLCRTG*IYVAFP
Trigger: AGGAAAAGCCACATAAATGCAACCAGTGCGGCAAAG...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAGGTGGAAGGCCTTGTTaGAGATGGTACATTTGTACT +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKGGRPC*RWYICT
Trigger: AGTACAAATGTACCATCTGCAACAAGGCCTTCCACC...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAACCTAGTCAGGTCCTTTaGGGAGGGGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKPSQVL*GGGSRA
Trigger: GGCCCTGCTGCCCCCTCCGCAAAGGACCTGACTAGG...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATAGTAGCTCTCAGCTCTaGACTGTCCTAGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYSSSQL*TVLVRS
Trigger: GGACCTGACTAGGACAGTGCAGAGCTGAGAGCTACT...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGTTTTGCACAAGCCGCTaGCGCCGCACACTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWFCTSR*RRTLGP
Trigger: GGGCCCCAGTGTGCGGCGCCAGCGGCTTGTGCAAAA...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGCCTGCAGAGCGTGCTaGCCTGGCGAAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAACRAC*PGESLC
Trigger: GCAAAGGCTTTCGCCAGGCCAGCACGCTCTGCAGGC...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAACTGGTTGCATTTATGTaGCTTTTCCTGGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VGATSLLPVIEETFSFPKLVAFM*LFLGVD
Trigger: ATCCACACCCAGGAAAAGCCACATAAATGCAACCAG...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAACGCCACAGTTGGTTTTaGACAAGCCGCTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKRHSWF*TSRWRR
Trigger: GCGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCG...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGCCTGGTTGATGACCTaGGGCTTGATGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAAWLMT*GLMTLP
Trigger: GGGCAGGGTCATCAAGCCGCAGGTCATCAACCAGGC...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCAGAGCGTGCTGGCCTaGCGAAAGCCTTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWQSVLA*RKPLPQ
Trigger: CTGCGGCAAAGGCTTTCGCCAGGCCAGCACGCTCTG...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAACAGAGCGTGCTGGCCTaGCGAAAGCCTTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKQSVLA*RKPLPQ
Trigger: CTGCGGCAAAGGCTTTCGCCAGGCCAGCACGCTCTG...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTATGTGGCTTTTCCTaGGTGTGGATAATTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PEYTKVGATSLLPVIEETLCGFS*VWIILC
Trigger: GCACAAAATTATCCACACCCAGGAAAAGCCACATAA...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAACCACCACCAAGGAGATaGGTTCCGAGCCATGCAGCG +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKPPPRR*VPSHAA
Trigger: CGCTGCATGGCTCGGAACGCATCTCCTTGGTGGTGG...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCCAGGCCGGCCAGCTTaGCGTTCTCCAGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWPGRPA*RSPAER
Trigger: TCTTTCTGCTGGAGAACGCCAAGCTGGCCGGCCTGG...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGATCTGCGGAGCCTCCTaGCAGCTTGCTGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWICGAS*QLAVAL
Trigger: AAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGAT...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
3UTR CAA 72 bp AAGTTTCCTGAATATACAAAGGTGGGGGCCACGAGTTaGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KFPEYTKVGATS*LPVIEETFSFP
Trigger: TGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAATCTTTTACATTCAGCTaGCATCACATGAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKSFTFS*HHMKSL
Trigger: AAGTGACTTCATGTGATGTCAGCTGAATGTAAAAGA...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283268.8
CDS-3UTR TCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTTCGAGTCCAGGTAGTTaGAGTAGTAGAGCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMASSPGS*SSRASR
Trigger: GCGGCTCGCTCTACTACTTCAACTACCTGGACTCGA...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATCTTTGCCGCACTGGTTaGATTTATGTGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYLCRTG*IYVAFP
Trigger: AGGAAAAGCCACATAAATGCAACCAGTGCGGCAAAG...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAAGCGTGGATGCGGATATaGGTGTTGAGCGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKAWMRI*VLSVEL
Trigger: CAGCTCCACGCTCAACACGCATATCCGCATCCACGC...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTTGGGGGCCACGAGTTTaGTGCCAGTCATCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAWGPRV*CQSSRK
Trigger: TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCA...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATCTGGTTGCATTTATGTaGCTTTTCCTGGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYLVAFM*LFLGVD
Trigger: ATCCACACCCAGGAAAAGCCACATAAATGCAACCAG...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAAGGGCCCACGCTGTCGTaGAGTTTGCGCACATGTTTC +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKGPTLS*SLRTCF
Trigger: GAAACATGTGCGCAAACTCCACGACAGCGTGGGCCC...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGTGGGGGCCACGAGTTTaGTGCCAGTCATCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWWGPRV*CQSSRK
Trigger: TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCA...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR GCA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATTTAAGTCAAAGTTTCTaGAAAACCCTTTGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYLSQSF*KTLCRK
Trigger: CTTGCGGCAAAGGGTTTTGCAGAAACTTTGACTTAA...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGGGGCCACGAGTTTGCTaGCAGTCATCGAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWGPRVC*QSSRKH
Trigger: ATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGGCTTTTCCTGGGTGTaGATAATTTTGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAGFSWV*IILCLQ
Trigger: CTGCAGGCACAAAATTATCCACACCCAGGAAAAGCC...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGATCTTCCCCTCCGCGTaGGATCACTGTCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWIFPSA*DHCLLH
Trigger: ATGTAAAAGACAGTGATCTCACGCGGAGGGGAAGAT...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAAGGCTTTTCCTGGGTGTaGATAATTTTGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKGFSWV*IILCLQ
Trigger: CTGCAGGCACAAAATTATCCACACCCAGGAAAAGCC...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR TCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTTCAGCTGACATCACATaGAGTCACTTGAAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMASADIT*SHLKWN
Trigger: ATTCCACTTCAAGTGACTTCATGTGATGTCAGCTGA...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283268.8
CDS-3UTR GCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGTTTGGTGAAAGCCTTTaGCGCAAAATTCGCAGACGA +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWFGESL*RKIRRR
Trigger: TCGTCTGCGAATTTTGCGGCAAAGGCTTTCACCAAA...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAACGCTGTCGTGGAGTTTaGGCACATGTTTCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKRCRGV*AHVSLS
Trigger: ACTTAAAGAAACATGTGCGCAAACTCCACGACAGCG...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGAACGCTTTGCCGCACTaGTTGCATTTATGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWNALPH*LHLCGF
Trigger: AAAGCCACATAAATGCAACCAGTGCGGCAAAGCGTT...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CCA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTTTATGTGGCTTTTCCTaGGTGTGGATAATTTTGTGC +
Preference number: 4 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMALCGFS*VWIILC
Trigger: GCACAAAATTATCCACACCCAGGAAAAGCCACATAA...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR GCA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAATTAAGTCAAAGTTTCTaGAAAACCCTTTGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKLSQSF*KTLCRK
Trigger: CTTGCGGCAAAGGGTTTTGCAGAAACTTTGACTTAA...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CCA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGTTATGTGGCTTTTCCTaGGTGTGGATAATTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LSYICIYSVFACTGGFTWLCGFS*VWIILC
Trigger: GCACAAAATTATCCACACCCAGGAAAAGCCACATAA...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS CCA 90 bp AAGTGGCCGGCGACGCTCCGGCGCGCGGGCAGGCCGGGGGCACCATaGTCTCCAGGGAAGCCGAGCTTGCCATGGCGCGCGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: KWPATLRRAGRPGAP*SPGKPSLPWRAELS
Trigger: GCTCAGCTCCGCGCGCCATGGCAAGCTCGGCTTCCCTGGAGACCATGGTGCCCCCGGCCTGCCCGCGCGCCGGAGCGTCGCCGGCCACTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS GCA 90 bp CCCTGCCCGCGGGCAGCGCGGACGGCGCCAGGCCCAGCTCGGCCTTaGAGCACACGCCACAGTTGGTTTTGCACAAGCCGCTGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: PCPRAARTAPGPARP*STRHSWFCTSRWRR
Trigger: GCGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCCTGGCGCCGTCCGCGCTGCCCGCGGGCAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 90 bp AGGGCGGCGGGGGCCTGCGCATTGAGGAGGCCAGACGGGAAGAGGTaGCCGCTGAGGAGCTCAGACGGCGGGTACGCGGTCGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RAAGACALRRPDGKR*PLRSSDGGYAVESR
Trigger: CCTGGACTCGACCGCGTACCCGCCGTCTGAGCTCCTCAGCGGCCACCTCTTCCCGTCTGGCCTCCTCAATGCGCAGGCCCCCGCCGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS TCA 90 bp CGCCGCCGCCCGCCCGGAGGCTGCTTTTCCAGAGCTCCGAGTAACTaGGCAGTGTCTTTGACGGCACCTCGTAGCCTAGGGGCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RRRPPGGCFSRAPSN*AVSLTAPRSLGAGG
Trigger: CCCTCCAGCCCCTAGGCTACGAGGTGCCGTCAAAGACACTGCTCAGTTACTCGGAGCTCTGGAAAAGCAGCCTCCGGGCGGGCGGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACGCCGGGTGGGGGAACTaGTCCGCAGCCAGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHAGWGN*SAARPA
Trigger: GGCCGGCCTGGCTGCGGACAAGTTCCCCCACCCGGC...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS TCA 90 bp CTAGGGGCTGGAGGGGGATCATACAGGGCAGCGGCGAGCAGAGGTTaGGCAGTTTCTTGCCCTGGCTGCCGTCCGCCTCTAGCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LGAGGGSYRAAASRG*AVSCPGCRPPLALQ
Trigger: CTGGAGCGCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCTGCCCTGTATGATCCCCCTCCAGCCCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 90 bp ATCATACAGGGCAGCGGCGAGCAGAGGTTGAGCAGTTTCTTGCCCTaGCTGCCGTCCGCCTCTAGCGCTCCAGGCCGGGGCTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: IIQGSGEQRLSSFLP*LPSASSAPGRGSKG
Trigger: GCCCTTTGAGCCCCGGCCTGGAGCGCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCTGCCCTGTATGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS TCA 90 bp TGGGCTTGCCATCTGCGGAGCCTCCTGGCAGCTTGCTGTGGCCCTTaGCGCCTCCGCGCTCGGCAGTCAGGGCCGAGTTTTCCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: WACHLRSLLAACCGP*RLRARQSGPSFPSV
Trigger: TACTGAAGGAAAACTCGGCCCTGACTGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS GCA 90 bp CACCTTGCCGCACACCTCGCAGGTGAAGTTTTTGGGCTTGCCATCTaGGGAGCCTCCTGGCAGCTTGCTGTGGCCCTTGACGCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: HLAAHLAGEVFGLAI*GASWQLAVALDASA
Trigger: CGCGGAGGCGTCAAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAAAAACTTCACCTGCGAGGTGTGCGGCAAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 90 bp CACCTCGCAGGTGAAGTTTTTGGGCTTGCCATCTGCGGAGCCTCCTaGCAGCTTGCTGTGGCCCTTGACGCCTCCGCGCTCGGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: HLAGEVFGLAICGAS*QLAVALDASALGSQ
Trigger: CTGACTGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAAAAACTTCACCTGCGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 90 bp AAGTTTTTGGGCTTGCCATCTGCGGAGCCTCCTGGCAGCTTGCTGTaGCCCTTGACGCCTCCGCGCTCGGCAGTCAGGGCCGAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: KFLGLPSAEPPGSLL*PLTPPRSAVRAEFS
Trigger: GGAAAACTCGGCCCTGACTGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAAAAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGCCGGGTGGGGGAACTaGTCCGCAGCCAGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALAGWGN*SAARPA
Trigger: GGCCGGCCTGGCTGCGGACAAGTTCCCCCACCCGGC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGCTTGCTGTGGCCCTaGACGCCTCCGCGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSLLWP*TPPRSA
Trigger: TGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGCT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGCGGGGCTCCGACGTCTaGGCCATGATGCGCTCGATG +
Preference number: 5 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWRGSDV*AMMRSM
Trigger: CATCGAGCGCATCATGGCCAAGACGTCGGAGCCCCG...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGGCCCAGCTCGGCCTaGCAGCACACGCCACAGTTG +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHRPSSA*QHTPQL
Trigger: CAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCCT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGTTGATGACCTGCGGCTaGATGACCCTGCCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWLMTCG*MTLPAG
Trigger: GCCCGCGGGCAGGGTCATCAAGCCGCAGGTCATCAA...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGCCAGGCCGGCCAGCTaGGCGTTCTCCAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGARPAS*AFSSRK
Trigger: CTTTCTGCTGGAGAACGCCAAGCTGGCCGGCCTGGC...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGGTTGAGCAGTTTCTaGCCCTGGCTGCCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHRLSSF*PWLPSA
Trigger: GGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAAGCGGCGAGCAGAGGTaGAGCAGTTTCTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGSGEQR*SSFLPW
Trigger: CCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCT...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGCGGCGAGCAGAGGTaGAGCAGTTTCTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSGEQR*SSFLPW
Trigger: CCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGCGGCGAGCAGAGGTaGAGCAGTTTCTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWSGEQR*SSFLPW
Trigger: CCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCT...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTTTGATGACCTGCGGCTaGATGACCCTGCCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWILMTCG*MTLPAG
Trigger: GCCCGCGGGCAGGGTCATCAAGCCGCAGGTCATCAA...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGCCCCACAGCCTGGTaGATGACCTGCGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWSPTAW*MTCGLM
Trigger: CATCAAGCCGCAGGTCATCAACCAGGCTGTGGGGCT...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACAGCCCCACAGCCTGGTaGATGACCTGCGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSPTAW*MTCGLM
Trigger: CATCAAGCCGCAGGTCATCAACCAGGCTGTGGGGCT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCAGCTTGCTGTGGCCCTaGACGCCTCCGCGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALSLLWP*TPPRSA
Trigger: TGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGCT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGCCTGGCGAAAGCCTTaGCCGCAGACTTTGCACACG +
Preference number: 5 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGAWRKP*PQTLHT
Trigger: CGTGTGCAAAGTCTGCGGCAAAGGCTTTCGCCAGGC...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGGTGGGGGCCACGAGTTaGCTGCCAGTCATCGAGGAA +
Preference number: 5 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWVGATS*LPVIEE
Trigger: TTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGACAGCACACGCCACAGTaGGTTTTGCACAAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGQHTPQ*VLHKPL
Trigger: CAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTG...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCACGCCACAGTTGGTTTaGCACAAGCCGCTGGCGCCG +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALTPQLV*HKPLAP
Trigger: CGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCGT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATGCCGGGTGGGGGAACTaGTCCGCAGCCAGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYAGWGN*SAARPA
Trigger: GGCCGGCCTGGCTGCGGACAAGTTCCCCCACCCGGC...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAGTGAAGTTTTTGGGCTaGCCATCTGCGGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGVKFLG*PSAEPP
Trigger: AGGAGGCTCCGCAGATGGCAAGCCCAAAAACTTCAC...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACTCGCAGGTGAAGTTTTaGGGCTTGCCATCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHSQVKF*GLPSAE
Trigger: CTCCGCAGATGGCAAGCCCAAAAACTTCACCTGCGA...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTCAGCACACGCCACAGTaGGTTTTGCACAAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIQHTPQ*VLHKPL
Trigger: CAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTG...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAAGGCCCAGCTCGGCCTaGCAGCACACGCCACAGTTG +
Preference number: 5 (lower is better)
Translates to: VGATSLLPVIEETFSFPKRPSSA*QHTPQL
Trigger: CAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCCT...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAATTGATGACCTGCGGCTaGATGACCCTGCCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKLMTCG*MTLPAG
Trigger: GCCCGCGGGCAGGGTCATCAAGCCGCAGGTCATCAA...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGCCTGGCGAAAGCCTTaGCCGCAGACTTTGCACACG +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALAWRKP*PQTLHT
Trigger: CGTGTGCAAAGTCTGCGGCAAAGGCTTTCGCCAGGC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACTGGGTGTGGATAATTTaGTGCCTGCAGAGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHWVWII*CLQSVL
Trigger: CAGCACGCTCTGCAGGCACAAAATTATCCACACCCA...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAAGGTTGAGCAGTTTCTaGCCCTGGCTGCCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKRLSSF*PWLPSA
Trigger: GGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCT...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAACGCCACAGTTGGTTTaGCACAAGCCGCTGGCGCCG +
Preference number: 5 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKTPQLV*HKPLAP
Trigger: CGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCGT...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCATGCGGATATGCGTGTaGAGCGTGGAGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALMRICV*SVELRL
Trigger: CAACCGCAGCTCCACGCTCAACACGCATATCCGCAT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTGCAGATGGTACATTaGTACTGCTTCTCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGLQMVH*YCFSPL
Trigger: CAGCGGCGAGAAGCAGTACAAATGTACCATCTGCAA...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS GCA 90 bp CGCAGCCTCTCTCCTCTAAGTCTCTTTCCCCCACCACCAAGGAGATaGGTTCCGAGCCATGCAGCGTGTCTCTTCTGTCACATTTTGATG +
Preference number: 5 (lower is better)
Translates to: RSLSPLSLFPPPPRR*VPSHAACLFCHILM
Trigger: CATCAAAATGTGACAGAAGAGACACGCTGCATGGCTCGGAACGCATCTCCTTGGTGGTGGGGGAAAGAGACTTAGAGGAGAGAGGCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS GCA 90 bp GGTCCTTTGCGGAGGGGGCAGCAGGGCCCACGCTGTCGTGGAGTTTaGGCACATGTTTCTTTAAGTCAAAGTTTCTGCAAAACCCTTTGC +
Preference number: 5 (lower is better)
Translates to: GPLRRGQQGPRCRGV*AHVSLSQSFCKTLC
Trigger: GCAAAGGGTTTTGCAGAAACTTTGACTTAAAGAAACATGTGCGCAAACTCCACGACAGCGTGGGCCCTGCTGCCCCCTCCGCAAAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAGAAAAGGCCAGTGTCTaGGAAGTGGCCGGCGACGCT +
Preference number: 5 (lower is better)
Translates to: VGATSLLPVIEETFSFPKEKASV*EVAGDA
Trigger: AGCGTCGCCGGCCACTTCCAAGACACTGGCCTTTTC...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAAGAAAAGGCCAGTGTCTaGGAAGTGGCCGGCGACGCT +
Preference number: 5 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKEKASV*EVAGDA
Trigger: AGCGTCGCCGGCCACTTCCAAGACACTGGCCTTTTC...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACAGCACACGCCACAGTaGGTTTTGCACAAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PEYTKVGATSLLPVIEETQHTPQ*VLHKPL
Trigger: CAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGTGAAGTTTTTGGGCTaGCCATCTGCGGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALVKFLG*PSAEPP
Trigger: AGGAGGCTCCGCAGATGGCAAGCCCAAAAACTTCAC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACCTTTGCCGCAGACTTaGCACACGAACGGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: PEYTKVGATSLLPVIEETPLPQT*HTNGLA
Trigger: AGCCAGACCGTTCGTGTGCAAAGTCTGCGGCAAAGG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAGCCTGGCGAAAGCCTTaGCCGCAGACTTTGCACACG +
Preference number: 5 (lower is better)
Translates to: VGATSLLPVIEETFSFPKAWRKP*PQTLHT
Trigger: CGTGTGCAAAGTCTGCGGCAAAGGCTTTCGCCAGGC...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTTGGGTGTGGATAATTTaGTGCCTGCAGAGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIWVWII*CLQSVL
Trigger: CAGCACGCTCTGCAGGCACAAAATTATCCACACCCA...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TGGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGCTTGTAGTTCCCTTTTaGGTGAAAGCCTTTGCCGCA +
Preference number: 5 (lower is better)
Translates to: WLPQEKRRPGIKYVSAHWLVVPF*VKAFAA
Trigger: TGCGGCAAAGGCTTTCACCAAAAAGGGAACTACAAG...CCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCTTCTGGGGCGCTCACACGCTGTCGTGGAGTTaGCGCACATGTTTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: LHGCIKMARGAALFWGAHTLSWS*RTCFFK
Trigger: CTTAAAGAAACATGTGCGCAAACTCCACGACAGCGT...GTGAGCGCCCCAGAAGAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACCTTTGCCGCAGACTTaGCACACGAACGGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKPLPQT*HTNGLA
Trigger: AGCCAGACCGTTCGTGTGCAAAGTCTGCGGCAAAGG...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATGGGTGTGGATAATTTaGTGCCTGCAGAGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: PEYTKVGATSLLPVIEETWVWII*CLQSVL
Trigger: CAGCACGCTCTGCAGGCACAAAATTATCCACACCCA...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCGCTTTGCCGCACTGGTaGCATTTATGTGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALALPHW*HLCGFS
Trigger: GGAAAAGCCACATAAATGCAACCAGTGCGGCAAAGC...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACACTGCGGTTGAACGCTTaGCCGCACTGGTTGCATTTA +
Preference number: 5 (lower is better)
Translates to: PEYTKVGATSLLPVIEETLRLNA*PHWLHL
Trigger: TAAATGCAACCAGTGCGGCAAAGCGTTCAACCGCAG...TGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCACCTGGTGGAAGGCCTaGTTGCAGATGGTACATTTG +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALTWWKA*LQMVHL
Trigger: CAAATGTACCATCTGCAACAAGGCCTTCCACCAGGT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGCTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGAATATTCCGTGTTCGCTaGTACAGGAGGATTTACATG +
Preference number: 5 (lower is better)
Translates to: GCPRRSGGLELNTFRRTGIFRVR*YRRIYM
Trigger: CATGTAAATCCTCCTGTACAAGCGAACACGGAATAT...TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS GCA 90 bp TCTAAGTCTCTTTCCCCCACCACCAAGGAGATGCGTTCCGAGCCATaGAGCGTGTCTCTTCTGTCACATTTTGATGGCAAACATCTTCCC +
Preference number: 5 (lower is better)
Translates to: SKSLSPTTKEMRSEP*SVSLLSHFDGKHLP
Trigger: GGGAAGATGTTTGCCATCAAAATGTGACAGAAGAGACACGCTGCATGGCTCGGAACGCATCTCCTTGGTGGTGGGGGAAAGAGACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CAA 90 bp TTCCTGAATATACAAAGGTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACTGCGGTTGAACGCTTaGCCGCACTGGTTGCATTTA +
Preference number: 5 (lower is better)
Translates to: FLNIQRWGPRVCCQSSRKLRLNA*PHWLHL
Trigger: TAAATGCAACCAGTGCGGCAAAGCGTTCAACCGCAG...TTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCACCTTTGTATATTCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCACGCTGTCGTGGAGTTaGCGCACATGTTTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALTLSWS*RTCFFK
Trigger: CTTAAAGAAACATGTGCGCAAACTCCACGACAGCGT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATGTGGGGGCCACGAGTTaGCTGCCAGTCATCGAGGAA +
Preference number: 5 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYVGATS*LPVIEE
Trigger: TTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATCCTTTGCCGCAGACTTaGCACACGAACGGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYPLPQT*HTNGLA
Trigger: AGCCAGACCGTTCGTGTGCAAAGTCTGCGGCAAAGG...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAGCTTTGCCGCACTGGTaGCATTTATGTGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VGATSLLPVIEETFSFPKALPHW*HLCGFS
Trigger: GGAAAAGCCACATAAATGCAACCAGTGCGGCAAAGC...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATATGCGGATATGCGTGTaGAGCGTGGAGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYMRICV*SVELRL
Trigger: CAACCGCAGCTCCACGCTCAACACGCATATCCGCAT...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GTGGGGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAATTGCAGATGGTACATTaGTACTGCTTCTCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: VGATSLLPVIEETFSFPKLQMVH*YCFSPL
Trigger: CAGCGGCGAGAAGCAGTACAAATGTACCATCTGCAA...TTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTGCCCCAGGAGAAGCGGAGGCCTGGAATTAAATACGTTTCGGCGCACTGGATTATATTCCGTGTTCGCTaGTACAGGAGGATTTACATG +
Preference number: 5 (lower is better)
Translates to: LPQEKRRPGIKYVSAHWIIFRVR*YRRIYM
Trigger: CATGTAAATCCTCCTGTACAAGCGAACACGGAATAT...AATCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGCCAGGCCGGCCAGCTaGGCGTTCTCCAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAARPAS*AFSSRK
Trigger: CTTTCTGCTGGAGAACGCCAAGCTGGCCGGCCTGGC...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAAAGCTTGCTGTGGCCCTaGACGCCTCCGCGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKSLLWP*TPPRSA
Trigger: TGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGCT...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp CTTGTACAGGAGGATTTACATGGCTGTATAAAGATGGCTAGGGGCGCCGCGCTCATATTCCGTGTTCGCTaGTACAGGAGGATTTACATG +
Preference number: 5 (lower is better)
Translates to: LVQEDLHGCIKMARGAALIFRVR*YRRIYM
Trigger: CATGTAAATCCTCCTGTACAAGCGAACACGGAATAT...GAGCGCGGCGCCCCTAGCCATCTTTATACAGCCATGTAAATCCTCCTGTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGAGGCCCAGCTCGGCCTaGCAGCACACGCCACAGTTG +
Preference number: 5 (lower is better)
Translates to: LSYICIYSVFACTGGFTWRPSSA*QHTPQL
Trigger: CAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCCT...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CAA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGGCCAGGCCGGCCAGCTaGGCGTTCTCCAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LSYICIYSVFACTGGFTWARPAS*AFSSRK
Trigger: CTTTCTGCTGGAGAACGCCAAGCTGGCCGGCCTGGC...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CAA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGAGGTTGAGCAGTTTCTaGCCCTGGCTGCCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: LSYICIYSVFACTGGFTWRLSSF*PWLPSA
Trigger: GGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCT...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CAA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAAACGCCACAGTTGGTTTaGCACAAGCCGCTGGCGCCG +
Preference number: 5 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKTPQLV*HKPLAP
Trigger: CGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCGT...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAAAGCCCCACAGCCTGGTaGATGACCTGCGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKSPTAW*MTCGLM
Trigger: CATCAAGCCGCAGGTCATCAACCAGGCTGTGGGGCT...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTATGCGGATATGCGTGTaGAGCGTGGAGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAMRICV*SVELRL
Trigger: CAACCGCAGCTCCACGCTCAACACGCATATCCGCAT...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATCTTGTAGTTCCCTTTTaGGTGAAAGCCTTTGCCGCA +
Preference number: 5 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYLVVPF*VKAFAA
Trigger: TGCGGCAAAGGCTTTCACCAAAAAGGGAACTACAAG...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GGGCCACGAGTTTGCTGCCAGTCATCGAGGAAACATTTAGCTTTCCAAAAATATACGCTGTCGTGGAGTTaGCGCACATGTTTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: GPRVCCQSSRKHLAFQKYTLSWS*RTCFFK
Trigger: CTTAAAGAAACATGTGCGCAAACTCCACGACAGCGT...ATATTTTTGGAAAGCTAAATGTTTCCTCGATGACTGGCAGCAAACTCGTGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTGAAGTTTTTGGGCTaGCCATCTGCGGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMAVKFLG*PSAEPP
Trigger: AGGAGGCTCCGCAGATGGCAAGCCCAAAAACTTCAC...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTTCGCAGGTGAAGTTTTaGGGCTTGCCATCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMASQVKF*GLPSAE
Trigger: CTCCGCAGATGGCAAGCCCAAAAACTTCACCTGCGA...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTACCTGGTGGAAGGCCTaGTTGCAGATGGTACATTTG +
Preference number: 5 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMATWWKA*LQMVHL
Trigger: CAAATGTACCATCTGCAACAAGGCCTTCCACCAGGT...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGGCTTTGCCGCACTGGTaGCATTTATGTGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSYICIYSVFACTGGFTWALPHW*HLCGFS
Trigger: GGAAAAGCCACATAAATGCAACCAGTGCGGCAAAGC...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CAA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGACCTGGTGGAAGGCCTaGTTGCAGATGGTACATTTG +
Preference number: 5 (lower is better)
Translates to: LSYICIYSVFACTGGFTWTWWKA*LQMVHL
Trigger: CAAATGTACCATCTGCAACAAGGCCTTCCACCAGGT...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CAA 90 bp GAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTCTCTTCTGTCACATTTaGATGGCAAACATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: ELYMYIFRVRLYRRIYMALFCHI*MANIFP
Trigger: GGGGAAGATGTTTGCCATCAAAATGTGACAGAAGAG...AGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS-3UTR CAA 90 bp ATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTGTATAAACTTGTAGTTCCCTTTTaGGTGAAAGCCTTTGCCGCA +
Preference number: 5 (lower is better)
Translates to: ICIYSVFACTGGFTWLYKLVVPF*VKAFAA
Trigger: TGCGGCAAAGGCTTTCACCAAAAAGGGAACTACAAG...TTTATACAGCCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS-3UTR CAA 90 bp TTGAGTTATATATGTATATATTCCGTGTTCGCTTGTACAGGAGGATTTACATGGCTCTTCTGTCACATTTaGATGGCAAACATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LSYICIYSVFACTGGFTWLFCHI*MANIFP
Trigger: GGGGAAGATGTTTGCCATCAAAATGTGACAGAAGAG...CCATGTAAATCCTCCTGTACAAGCGAACACGGAATATATACATATATAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS CCA 72 bp GCGACGCTCCGGCGCGCGGGCAGGCCGGGGGCACCATaGTCTCCAGGGAAGCCGAGCTTGCCATGGCGCGCG +
Preference number: 6 (lower is better)
Translates to: ATLRRAGRPGAP*SPGKPSLPWRA
Trigger: CGCGCGCCATGGCAAGCTCGGCTTCCCTGGAGACCATGGTGCCCCCGGCCTGCCCGCGCGCCGGAGCGTCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 90 bp ACCCTGCCCGCGGGCAGCGCGGACGGCGCCAGGCCCAGCTCGGCCTaGCAGCACACGCCACAGTTGGTTTTGCACAAGCCGCTGGCGCCG +
Preference number: 6 (lower is better)
Translates to: TLPAGSADGARPSSA*QHTPQLVLHKPLAP
Trigger: CGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCCTGGCGCCGTCCGCGCTGCCCGCGGGCAGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 72 bp GGGGCACCATGGTCTCCAGGGAAGCCGAGCTTGCCATaGCGCGCGGAGCTGAGCCGAGCCAGGCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GAPWSPGKPSLP*RAELSRARLGQ
Trigger: CTGGCCCAGCCTGGCTCGGCTCAGCTCCGCGCGCCATGGCAAGCTCGGCTTCCCTGGAGACCATGGTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS GCA 72 bp CGGGCAGCGCGGACGGCGCCAGGCCCAGCTCGGCCTTaGAGCACACGCCACAGTTGGTTTTGCACAAGCCGC +
Preference number: 6 (lower is better)
Translates to: RAARTAPGPARP*STRHSWFCTSR
Trigger: GCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCCTGGCGCCGTCCGCGCTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 72 bp GGCAGCGGCGAGCAGAGGTTGAGCAGTTTCTTGCCCTaGCTGCCGTCCGCCTCTAGCGCTCCAGGCCGGGGC +
Preference number: 6 (lower is better)
Translates to: GSGEQRLSSFLP*LPSASSAPGRG
Trigger: GCCCCGGCCTGGAGCGCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 72 bp GGGGCCTGCGCATTGAGGAGGCCAGACGGGAAGAGGTaGCCGCTGAGGAGCTCAGACGGCGGGTACGCGGTC +
Preference number: 6 (lower is better)
Translates to: GACALRRPDGKR*PLRSSDGGYAV
Trigger: GACCGCGTACCCGCCGTCTGAGCTCCTCAGCGGCCACCTCTTCCCGTCTGGCCTCCTCAATGCGCAGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 72 bp GCGGGCAGCGCGGACGGCGCCAGGCCCAGCTCGGCCTaGCAGCACACGCCACAGTTGGTTTTGCACAAGCCG +
Preference number: 6 (lower is better)
Translates to: AGSADGARPSSA*QHTPQLVLHKP
Trigger: CGGCTTGTGCAAAACCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCCTGGCGCCGTCCGCGCTGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 90 bp TCCGACGTCTTGGCCATGATGCGCTCGATGGAAAAGGCCAGTGTCTaGGAAGTGGCCGGCGACGCTCCGGCGCGCGGGCAGGCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: SDVLAMMRSMEKASV*EVAGDAPARGQAGG
Trigger: GCCCCCGGCCTGCCCGCGCGCCGGAGCGTCGCCGGCCACTTCCAAGACACTGGCCTTTTCCATCGAGCGCATCATGGCCAAGACGTCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 72 bp CCCAGCTCGGCCTTGCAGCACACGCCACAGTTGGTTTaGCACAAGCCGCTGGCGCCGCACACTGGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: PSSALQHTPQLV*HKPLAPHTGAP
Trigger: GGGGGCCCCAGTGTGCGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 72 bp CCAGGCCCAGCTCGGCCTTGCAGCACACGCCACAGTTaGTTTTGCACAAGCCGCTGGCGCCGCACACTGGGG +
Preference number: 6 (lower is better)
Translates to: PGPARPCSTRHS*FCTSRWRRTLG
Trigger: CCCCAGTGTGCGGCGCCAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTGCAAGGCCGAGCTGGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 90 bp AGGGGGATCATACAGGGCAGCGGCGAGCAGAGGTTGAGCAGTTTCTaGCCCTGGCTGCCGTCCGCCTCTAGCGCTCCAGGCCGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: RGIIQGSGEQRLSSF*PWLPSASSAPGRGS
Trigger: TGAGCCCCGGCCTGGAGCGCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCTGCCCTGTATGATCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS TCA 72 bp GCTCAGACGGCGGGTACGCGGTCGAGTCCAGGTAGTTaGAGTAGTAGAGCGAGCCGCTGGCCGGCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: AQTAGTRSSPGS*SSRASRWPAAP
Trigger: TGGGGCTGCCGGCCAGCGGCTCGCTCTACTACTTCAACTACCTGGACTCGACCGCGTACCCGCCGTCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 72 bp TTGGCCATGATGCGCTCGATGGAAAAGGCCAGTGTCTaGGAAGTGGCCGGCGACGCTCCGGCGCGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: LAMMRSMEKASV*EVAGDAPARGQ
Trigger: CTGCCCGCGCGCCGGAGCGTCGCCGGCCACTTCCAAGACACTGGCCTTTTCCATCGAGCGCATCATGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 90 bp CCTAGGGGCTGGAGGGGGATCATACAGGGCAGCGGCGAGCAGAGGTaGAGCAGTTTCTTGCCCTGGCTGCCGTCCGCCTCTAGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: PRGWRGIIQGSGEQR*SSFLPWLPSASSAP
Trigger: TGGAGCGCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCTGCCCTGTATGATCCCCCTCCAGCCCCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS GCA 72 bp CGCTCGGCAGTCAGGGCCGAGTTTTCCTTCAGTACCTaGTCCAGCGGCGCCGGCAAGCGCTCCTTATGGGGA +
Preference number: 6 (lower is better)
Translates to: RSAVRAEFSFST*SSGAGKRSLWG
Trigger: TCCCCATAAGGAGCGCTTGCCGGCGCCGCTGGAGCAGGTACTGAAGGAAAACTCGGCCCTGACTGCCGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 72 bp GGTGGGGGAACTTGTCCGCAGCCAGGCCGGCCAGCTTaGCGTTCTCCAGCAGAAAGAGCTTGGGGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: GGGTCPQPGRPA*RSPAERAWGEQ
Trigger: CTGCTCACCCCAAGCTCTTTCTGCTGGAGAACGCCAAGCTGGCCGGCCTGGCTGCGGACAAGTTCCCCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 72 bp ATACAGGGCAGCGGCGAGCAGAGGTTGAGCAGTTTCTaGCCCTGGCTGCCGTCCGCCTCTAGCGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: IQGSGEQRLSSF*PWLPSASSAPG
Trigger: GCCTGGAGCGCTAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCTGCCCTGTAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 90 bp TTGGGCTTGCCATCTGCGGAGCCTCCTGGCAGCTTGCTGTGGCCCTaGACGCCTCCGCGCTCGGCAGTCAGGGCCGAGTTTTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LGLPSAEPPGSLLWP*TPPRSAVRAEFSFS
Trigger: ACTGAAGGAAAACTCGGCCCTGACTGCCGAGCGCGGAGGCGTCAAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS TCA 72 bp GGAGGGGGATCATACAGGGCAGCGGCGAGCAGAGGTTaGGCAGTTTCTTGCCCTGGCTGCCGTCCGCCTCTA +
Preference number: 6 (lower is better)
Translates to: GGGSYRAAASRG*AVSCPGCRPPL
Trigger: TAGAGGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCTGCCCTGTATGATCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 72 bp GGTGAAGTTTTTGGGCTTGCCATCTGCGGAGCCTCCTaGCAGCTTGCTGTGGCCCTTGACGCCTCCGCGCTC +
Preference number: 6 (lower is better)
Translates to: GEVFGLAICGAS*QLAVALDASAL
Trigger: GAGCGCGGAGGCGTCAAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAAAAACTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 72 bp TGGAGGGGGATCATACAGGGCAGCGGCGAGCAGAGGTaGAGCAGTTTCTTGCCCTGGCTGCCGTCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: WRGIIQGSGEQR*SSFLPWLPSAS
Trigger: AGAGGCGGACGGCAGCCAGGGCAAGAAACTGCTCAACCTCTGCTCGCCGCTGCCCTGTATGATCCCCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS TCA 72 bp GCTCAAAGGGCGCACGGGGCTCCGACGTCTTGGCCATaGTGCGCTCGATGGAAAAGGCCAGTGTCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: AQRAHGAPTSWP*CARWKRPVSWK
Trigger: CTTCCAAGACACTGGCCTTTTCCATCGAGCGCATCATGGCCAAGACGTCGGAGCCCCGTGCGCCCTTTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 90 bp GCGTTAAACACCTTGCCGCACACCTCGCAGGTGAAGTTTTTGGGCTaGCCATCTGCGGAGCCTCCTGGCAGCTTGCTGTGGCCCTTGACG +
Preference number: 6 (lower is better)
Translates to: ALNTLPHTSQVKFLG*PSAEPPGSLLWPLT
Trigger: CGTCAAGGGCCACAGCAAGCTGCCAGGAGGCTCCGCAGATGGCAAGCCCAAAAACTTCACCTGCGAGGTGTGCGGCAAGGTGTTTAACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS GCA 72 bp TCTCCTCTAAGTCTCTTTCCCCCACCACCAAGGAGATaGGTTCCGAGCCATGCAGCGTGTCTCTTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: SPLSLFPPPPRR*VPSHAACLFCH
Trigger: GTGACAGAAGAGACACGCTGCATGGCTCGGAACGCATCTCCTTGGTGGTGGGGGAAAGAGACTTAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS CAA 72 bp GCGGAGGGGGCAGCAGGGCCCACGCTGTCGTGGAGTTaGCGCACATGTTTCTTTAAGTCAAAGTTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: AEGAAGPTLSWS*RTCFFKSKFLQ
Trigger: TTGCAGAAACTTTGACTTAAAGAAACATGTGCGCAAACTCCACGACAGCGTGGGCCCTGCTGCCCCCTCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CCA 72 bp TCCTTTGCGGAGGGGGCAGCAGGGCCCACGCTGTCGTaGAGTTTGCGCACATGTTTCTTTAAGTCAAAGTTT +
Preference number: 6 (lower is better)
Translates to: SFAEGAAGPTLS*SLRTCFFKSKF
Trigger: AAACTTTGACTTAAAGAAACATGTGCGCAAACTCCACGACAGCGTGGGCCCTGCTGCCCCCTCCGCAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS CAA 90 bp AGGTCCTTTGCGGAGGGGGCAGCAGGGCCCACGCTGTCGTGGAGTTaGCGCACATGTTTCTTTAAGTCAAAGTTTCTGCAAAACCCTTTG +
Preference number: 6 (lower is better)
Translates to: RSFAEGAAGPTLSWS*RTCFFKSKFLQNPL
Trigger: CAAAGGGTTTTGCAGAAACTTTGACTTAAAGAAACATGTGCGCAAACTCCACGACAGCGTGGGCCCTGCTGCCCCCTCCGCAAAGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5
CDS GCA 72 bp CTTTCCCCCACCACCAAGGAGATGCGTTCCGAGCCATaGAGCGTGTCTCTTCTGTCACATTTTGATGGCAAA +
Preference number: 6 (lower is better)
Translates to: LSPTTKEMRSEP*SVSLLSHFDGK
Trigger: TTTGCCATCAAAATGTGACAGAAGAGACACGCTGCATGGCTCGGAACGCATCTCCTTGGTGGTGGGGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS TCA 72 bp TTCCGAGCCATGCAGCGTGTCTCTTCTGTCACATTTTaGTGGCAAACATCTTCCCCTCCGCGTGAGATCACT +
Preference number: 6 (lower is better)
Translates to: FRAMQRVSSVTF*WQTSSPPREIT
Trigger: AGTGATCTCACGCGGAGGGGAAGATGTTTGCCATCAAAATGTGACAGAAGAGACACGCTGCATGGCTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283268.8
ENST00000486811.5
CDS GCA 72 bp TGTGGTTCTTGTAGTTCCCTTTTTGGTGAAAGCCTTTaGCGCAAAATTCGCAGACGAAGGGCTTGTAGCCCG +
Preference number: 6 (lower is better)
Translates to: CGSCSSLFGESL*RKIRRRRACSP
Trigger: CGGGCTACAAGCCCTTCGTCTGCGAATTTTGCGGCAAAGGCTTTCACCAAAAAGGGAACTACAAGAACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283268.8
ENST00000475839.1
ENST00000486811.5