RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FEZ2 (Homo sapiens)

Ensembl gene IDs: ENSG00000171055

Ensembl transcript IDs: ENST00000305852.11, ENST00000357996.4, ENST00000379245.8, ENST00000405912.8, ENST00000413938.5, ENST00000414288.5, ENST00000432869.5, ENST00000441005.5, ENST00000451623.5, ENST00000464964.1, ENST00000475815.5, ENST00000484205.1, ENST00000487282.5, ENST00000487919.5, ENST00000535666.2

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGACACAGA +
Preference number: 1 (lower is better)
Translates to: VMVASSQNNAVGNLA*SPPQIKLLLYVGHR
Trigger: TCTGTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413938.5
ENST00000432869.5
ENST00000451623.5
3UTR TCA 90 bp AGTCAAGATCTGTTAATACTGAATCAAACCCAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAA +
Preference number: 1 (lower is better)
Translates to: SQDLLILNQTQVQMC*VSNSKKGNGSQLSE
Trigger: TTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTTGATTCAGTATTAACAGATCTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
3UTR TCA 90 bp TTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTaGACAATACTGGTAGGTAATAGTTACACTGACAATTCTCACAAA +
Preference number: 1 (lower is better)
Translates to: FCFFKNSPFILFQSL*TILVGNSYTDNSHK
Trigger: TTTGTGAGAATTGTCAGTGTAACTATTACCTACCAGTATTGTTCAGAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CCA 90 bp GCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: AVGNLAWSPPQIKLLLYVVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...TACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413938.5
ENST00000432869.5
ENST00000451623.5
3UTR-3UTR CCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CCA 90 bp GAAAGCATTGAAAGCCGATCTGACTGTGTAGGGGTTTCATCATCTTCTGGGTCCGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: ESIESRSDCVGVSSSSGSVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...GGACCCAGAAGATGATGAAACCCCTACACAGTCAGATCGGCTTTCAATGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413938.5
3UTR-3UTR GCA 90 bp AGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGGAATTAGATGGGTGCTaGTTCCCTAAGGCATGCGGT +
Preference number: 2 (lower is better)
Translates to: RRVMVASSQNNAVGNLAWELDGC*FPKACG
Trigger: ACCGCATGCCTTAGGGAAGCAGCACCCATCTAATTC...CCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
3UTR-3UTR TCA 90 bp GAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTAAATTTGACCAGTGGTaGAACAAGCAGCAAGCTACA +
Preference number: 2 (lower is better)
Translates to: EWAVLQCTLSQAPQRTHTKFDQW*NKQQAT
Trigger: TGTAGCTTGCTGCTTGTTTCACCACTGGTCAAATTT...AGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR GCA 90 bp TTAACAAGCTCGGAACTTTTTCACTGTCCTCCTTCATGGCACGAAGAATTTTTGCGTAAAGCCAACTGCTaGACCAGCTCCTCAGAGTAC +
Preference number: 2 (lower is better)
Translates to: LTSSELFHCPPSWHEEFLRKANC*TSSSEY
Trigger: GTACTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACG...CAAAAATTCTTCGTGCCATGAAGGAGGACAGTGAAAAAGTTCCGAGCTTGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413938.5
3UTR-3UTR GCA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGATGCTTCCCTAAGGCATaGGGTATAGGTAGGTTCACA +
Preference number: 2 (lower is better)
Translates to: FPIARRVMVASSQNNAVGCFPKA*GIGRFT
Trigger: TGTGAACCTACCTATACCGCATGCCTTAGGGAAGCA...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
3UTR-3UTR GCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCGCAGAATTAGATGGGTaGTGCTTCCCTAAGGCATGC +
Preference number: 2 (lower is better)
Translates to: KPKFKCAEFPIARRVMVAAELDG*CFPKAC
Trigger: GCATGCCTTAGGGAAGCAGCACCCATCTAATTCTGC...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
3UTR-3UTR CCA 90 bp GCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAAATGGTGTTCAGGTGTaGATGCTCCAAATAATCAAA +
Preference number: 2 (lower is better)
Translates to: AVGNLAWSPPQIKLLLYVNGVQV*MLQIIK
Trigger: TTTGATTATTTGGAGCATCCACACCTGAACACCATT...TACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413938.5
3UTR-3UTR TCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTCTGTTTCAATCTCTCTaGACAATACTGGTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLLFQSL*TILVGN
Trigger: ATTACCTACCAGTATTGTTCAGAGAGATTGAAACAG...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR TCA 90 bp GTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCACATATGTGCCGGGCATATaGCTTCTCTCATTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: VHFLKHLRGHTLKVQFFTYVPGI*LLSFFP
Trigger: TGGGAAGAATGAGAGAAGTCATATGCCCGGCACATA...TGTGAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413938.5
3UTR-3UTR TCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTAAATTTGACCAGTGGTaGAACAAGCAGCAAGCTACA +
Preference number: 2 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSKFDQW*NKQQAT
Trigger: TGTAGCTTGCTGCTTGTTTCACCACTGGTCAAATTT...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR TCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTACAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: IARRVMVASSQNNAVGNLQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CCA 90 bp TTAAATGCCATTGATTTGACTGGAACCAGCAAAAGTGCTCATGATATTGATGAAGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: LNAIDLTGTSKSAHDIDEVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...TTCATCAATATCATGAGCACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
3UTR-3UTR TCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGCAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: KQQATKSITTNSFNVSTKQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR TCA 90 bp AGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCCAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: SVHFLKHLRGHTLKVQFFQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...GAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR TCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTCTGTTTCAATCTCTCTaGACAATACTGGTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSLFQSL*TILVGN
Trigger: ATTACCTACCAGTATTGTTCAGAGAGATTGAAACAG...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR TCA 90 bp TCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTGAACAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: SGFASSRTARLFCFNLSEQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...TTCAGAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR TCA 90 bp GTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCACACTGTTTCAATCTCTCTaGACAATACTGGTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: VHFLKHLRGHTLKVQFFTLFQSL*TILVGN
Trigger: ATTACCTACCAGTATTGTTCAGAGAGATTGAAACAG...TGTGAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR GCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTAGCCATAAAAACAAATaGGCATACTGTCAGTTAATG +
Preference number: 2 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSSHKNK*AYCQLM
Trigger: CATTAACTGACAGTATGCCCATTTGTTTTTATGGCT...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR TCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCCAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR GCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: KQQATKSITTNSFNVSTKNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR GCA 90 bp GTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCACAAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: VHFLKHLRGHTLKVQFFTNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...TGTGAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGAGCCATAAAAACAAATaGGCATACTGTCAGTTAATG +
Preference number: 2 (lower is better)
Translates to: KQQATKSITTNSFNVSTKSHKNK*AYCQLM
Trigger: CATTAACTGACAGTATGCCCATTTGTTTTTATGGCT...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR GCA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: HILVLLLQEQPVYSVSISNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CCA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTAGCCATAAAAACAAATaGGCATACTGTCAGTTAATG +
Preference number: 2 (lower is better)
Translates to: HILVLLLQEQPVYSVSISSHKNK*AYCQLM
Trigger: CATTAACTGACAGTATGCCCATTTGTTTTTATGGCT...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CAA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 3 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CAA 90 bp AAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGACACAGTGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 3 (lower is better)
Translates to: KSSLEPTADKVAALCRTQCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...CTGTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413938.5
ENST00000432869.5
ENST00000451623.5
3UTR CCA 72 bp GCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTA +
Preference number: 3 (lower is better)
Translates to: ASSQNNAVGNLA*SPPQIKLLLYV
Trigger: TACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413938.5
ENST00000432869.5
ENST00000451623.5
3UTR-3UTR CAA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 3 (lower is better)
Translates to: PKFKCAEFPIARRVMVASCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CAA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTATGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 3 (lower is better)
Translates to: IARRVMVASSQNNAVGNLCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CAA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 3 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CAA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 3 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR GCA 72 bp AATAAAATAGGACACAGTAATGAGAATGGGCAGTTCTaGAGTGTACACTTTCTCAAGCACCTCAGAGGACAC +
Preference number: 3 (lower is better)
Translates to: NKIGHSNENGQF*SVHFLKHLRGH
Trigger: GTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTCATTACTGTGTCCTATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CAA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 3 (lower is better)
Translates to: KQQATKSITTNSFNVSTKMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR-3UTR CAA 90 bp GTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCACAATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 3 (lower is better)
Translates to: VHFLKHLRGHTLKVQFFTMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...TGTGAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR TCA 72 bp CTGTTAATACTGAATCAAACCCAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAG +
Preference number: 3 (lower is better)
Translates to: LLILNQTQVQMC*VSNSKKGNGSQ
Trigger: CTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTTGATTCAGTATTAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
3UTR CCA 72 bp CCAGAGCAGAAATGCACTGAATTCTCCATTAACCAATaGTGTTCAGGTGTGGATGCTCCAAATAATCAAAAT +
Preference number: 3 (lower is better)
Translates to: PEQKCTEFSINQ*CSGVDAPNNQN
Trigger: ATTTTGATTATTTGGAGCATCCACACCTGAACACCATTGGTTAATGGAGAATTCAGTGCATTTCTGCTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413938.5
CDS-3UTR TCA 90 bp GTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGAGGAGGCTGCGCTCCGTaGTGGGCCGCACGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: VGNLAWSPPQIKLLLYVGGGCAP*WAARPS
Trigger: GGACGGCCGTGCGGCCCATCACGGAGCGCAGCCTCC...TCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451623.5
CDS-3UTR TCA 90 bp AGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGGGAGGCTGCGCTCCGTaGTGGGCCGCACGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RRVMVASSQNNAVGNLAWGGCAP*WAARPS
Trigger: GGACGGCCGTGCGGCCCATCACGGAGCGCAGCCTCC...CCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR TCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTGGAGGCTGCGCTCCGTaGTGGGCCGCACGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSGGCAP*WAARPS
Trigger: GGACGGCCGTGCGGCCCATCACGGAGCGCAGCCTCC...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR GCA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCGCTTCTCCTCCAAGCTaGAGGCCGGGGCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSASPPS*RPGPGN
Trigger: GTTTCCCGGCCCCGGCCTGCAGCTTGGAGGAGAAGC...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR GCA 90 bp AAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGACACAGGCTTCTCCTCCAAGCTaGAGGCCGGGGCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KSSLEPTADKVAALCRTQASPPS*RPGPGN
Trigger: GTTTCCCGGCCCCGGCCTGCAGCTTGGAGGAGAAGC...CTGTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451623.5
CDS-3UTR GCA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCCAAATCTCGTCCCCCTaGAGGAGGCTGCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSQISSP*RRLRSV
Trigger: CACGGAGCGCAGCCTCCTGCAGGGGGACGAGATTTG...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR TCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACCGTGTGCCGGGCATATaGCTTCTCTCATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHRVPGI*LLSFFP
Trigger: TGGGAAGAATGAGAGAAGTCATATGCCCGGCACACG...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379245.8
CDS-3UTR TCA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGCCAGCGGCCCGAGCATaGGGAGCAGAATTAGATGGG +
Preference number: 4 (lower is better)
Translates to: FKCAEFPIARRVMVASSQPAARA*GAELDG
Trigger: CCCATCTAATTCTGCTCCTCATGCTCGGGCCGCTGG...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
CDS-3UTR GCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACCGTAAAGCCAACTGCTaGACCAGCTCCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHRKANC*TSSSEY
Trigger: GTACTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACG...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp GCTCAGCATACTCTAATAAACGTCCTCCTCTTCCCCTTCGTAGCATTCTGGGACCGTAAAGCCAACTGCTaGACCAGCTCCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: AQHTLINVLLFPFVAFWDRKANC*TSSSEY
Trigger: GTACTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACG...GTCCCAGAATGCTACGAAGGGGAAGAGGAGGACGTTTATTAGAGTATGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414288.5
CDS-3UTR GCA 90 bp CCACCGCAGATAAAGTTGCTGCTCTATGTAGGACACAGAAAGACAGGAGCCAGCGAATTAGATGGGTGCTaGTTCCCTAAGGCATGCGGT +
Preference number: 4 (lower is better)
Translates to: PPQIKLLLYVGHRKTGASELDGC*FPKACG
Trigger: ACCGCATGCCTTAGGGAAGCAGCACCCATCTAATTC...GCTGGCTCCTGTCTTTCTGTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
CDS-3UTR CCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCGCGTTACAGTTCTCCTaGTCCAGGAGGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: KPKFKCAEFPIARRVMVAALQFS*SRRLRA
Trigger: GGCCCGGAGCCTCCTGGACCAGGAGAACTGTAACGC...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR TCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACGGTCCTAGTATGCGATaGCTTCCAGTCTACAGGCAT +
Preference number: 4 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHGPSMR*LPVYRH
Trigger: ATGCCTGTAGACTGGAAGTCATCGCATACTAGGACC...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp GAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTGGTCCTAGTATGCGATaGCTTCCAGTCTACAGGCAT +
Preference number: 4 (lower is better)
Translates to: EWAVLQCTLSQAPQRTHTGPSMR*LPVYRH
Trigger: ATGCCTGTAGACTGGAAGTCATCGCATACTAGGACC...AGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp GCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGTCCTAGTATGCGATaGCTTCCAGTCTACAGGCAT +
Preference number: 4 (lower is better)
Translates to: AVGNLAWSPPQIKLLLYVGPSMR*LPVYRH
Trigger: ATGCCTGTAGACTGGAAGTCATCGCATACTAGGACC...TACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp TCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTGAAGCTTCTCCTCCAAGCTaGAGGCCGGGGCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SGFASSRTARLFCFNLSEASPPS*RPGPGN
Trigger: GTTTCCCGGCCCCGGCCTGCAGCTTGGAGGAGAAGC...TTCAGAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR GCA 90 bp GCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGACACAGAAAGACAGCAGAATTAGATGGGTaGTGCTTCCCTAAGGCATGC +
Preference number: 4 (lower is better)
Translates to: AWSPPQIKLLLYVGHRKTAELDG*CFPKAC
Trigger: GCATGCCTTAGGGAAGCAGCACCCATCTAATTCTGC...TGTCTTTCTGTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
CDS-3UTR CCA 90 bp GCAGAATTAGATGGGTGCTGCTTCCCTAAGGCATGCGGTATAGGTAGGTTCACAGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: AELDGCCFPKACGIGRFTVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...TGTGAACCTACCTATACCGCATGCCTTAGGGAAGCAGCACCCATCTAATTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
CDS-3UTR TCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTGGTCCTAGTATGCGATaGCTTCCAGTCTACAGGCAT +
Preference number: 4 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLGPSMR*LPVYRH
Trigger: ATGCCTGTAGACTGGAAGTCATCGCATACTAGGACC...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACACAGGAGACGATGATTaGGTGCATATCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHTGDDD*VHIQLF
Trigger: GAACAGCTGGATATGCACTCAATCATCGTCTCCTGT...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp GCTCAGCATACTCTAATAAACGTCCTCCTCTTCCCCTTCGTAGCATTCTGGGACTATGTGCCGGGCATATaGCTTCTCTCATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AQHTLINVLLFPFVAFWDYVPGI*LLSFFP
Trigger: TGGGAAGAATGAGAGAAGTCATATGCCCGGCACATA...GTCCCAGAATGCTACGAAGGGGAAGAGGAGGACGTTTATTAGAGTATGCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414288.5
CDS-3UTR GCA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCGTAAAGCCAACTaGTGCACCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PKFKCAEFPIARRVMVASSRKAN*CTSSSE
Trigger: CTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACGAGA...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp ACTTTACCGAGCACGATCAGGGGAAGCCTAACTGCAAAGAGACTTTTTGAGTTCTCTCGTAAAGCCAACTaGTGCACCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TLPSTIRGSLTAKRLFEFSRKAN*CTSSSE
Trigger: CTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACGAGA...GAACTCAAAAAGTCTCTTTGCAGTTAGGCTTCCCCTGATCGTGCTCGGTAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414288.5
CDS-3UTR GCA 90 bp GAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTTCAATAACCTGGTCTaGCGTGAAGAGGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: EWAVLQCTLSQAPQRTHTFNNLV*REEGFI
Trigger: GATGAACCCCTCTTCACGGCAGACCAGGTTATTGAA...AGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR GCA 90 bp GCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTATGCTTCCCTAAGGCATaGGGTATAGGTAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: AVGNLAWSPPQIKLLLYVCFPKA*GIGRFT
Trigger: TGTGAACCTACCTATACCGCATGCCTTAGGGAAGCA...TACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
CDS-3UTR TCA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCGGTCCTAGTATGCGATaGCTTCCAGTCTACAGGCAT +
Preference number: 4 (lower is better)
Translates to: PKFKCAEFPIARRVMVASGPSMR*LPVYRH
Trigger: ATGCCTGTAGACTGGAAGTCATCGCATACTAGGACC...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCACAGGAGACGATGATTaGGTGCATATCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSTGDDD*VHIQLF
Trigger: GAACAGCTGGATATGCACTCAATCATCGTCTCCTGT...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCTATGTGCCGGGCATATaGCTTCTCTCATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSYVPGI*LLSFFP
Trigger: TGGGAAGAATGAGAGAAGTCATATGCCCGGCACATA...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305852.11
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS-3UTR TCA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCCTGTTTCTCTCCACCTaGATTTCCAAAGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: PKFKCAEFPIARRVMVASLFLST*ISKGVA
Trigger: CGCCACACCTTTGGAAATTCAGGTGGAGAGAAACAG...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379245.8
ENST00000432869.5
CDS-3UTR GCA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGACGTAAAGCCAACTGCTaGACCAGCTCCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: FPIARRVMVASSQNNAVGRKANC*TSSSEY
Trigger: GTACTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACG...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGATCTCGTAAAGCCAACTaGTGCACCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FPIARRVMVASSQNNAVGSRKAN*CTSSSE
Trigger: CTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACGAGA...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGTCTCGTAAAGCCAACTaGTGCACCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FKCAEFPIARRVMVASSQSRKAN*CTSSSE
Trigger: CTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACGAGA...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCAAATCTCGTCCCCCTaGAGGAGGCTGCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: HILVLLLQEQPVYSVSISQISSP*RRLRSV
Trigger: CACGGAGCGCAGCCTCCTGCAGGGGGACGAGATTTG...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR GCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCCAAATCTCGTCCCCCTaGAGGAGGCTGCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLQISSP*RRLRSV
Trigger: CACGGAGCGCAGCCTCCTGCAGGGGGACGAGATTTG...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR CCA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTGCGTTACAGTTCTCCTaGTCCAGGAGGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: HILVLLLQEQPVYSVSISALQFS*SRRLRA
Trigger: GGCCCGGAGCCTCCTGGACCAGGAGAACTGTAACGC...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR CCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCGCGTTACAGTTCTCCTaGTCCAGGAGGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLALQFS*SRRLRA
Trigger: GGCCCGGAGCCTCCTGGACCAGGAGAACTGTAACGC...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR TCA 90 bp GAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTACTTACCCCTTTTTCTaGGAGGTTCAGAGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: EWAVLQCTLSQAPQRTHTTYPFF*EVQSKQ
Trigger: TTGCTTACTCTGAACCTCTCAGAAAAAGGGGTAAGT...AGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGACACAGTGCAAGGTCCTAGTATaGGATGACTTCCAGTCTACA +
Preference number: 4 (lower is better)
Translates to: KSSLEPTADKVAALCRTQCKVLV*DDFQST
Trigger: TGTAGACTGGAAGTCATCGCATACTAGGACCTTGCA...CTGTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTTGCAAGGTCCTAGTATaGGATGACTTCCAGTCTACA +
Preference number: 4 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLCKVLV*DDFQST
Trigger: TGTAGACTGGAAGTCATCGCATACTAGGACCTTGCA...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTCAGAGTAAGCAAGTaGAAGGTCCTAGTATGCGAT +
Preference number: 4 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHFRVSK*KVLVCD
Trigger: ATCGCATACTAGGACCTTGCACTTGCTTACTCTGAA...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp GCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTATTCAGAGTAAGCAAGTaGAAGGTCCTAGTATGCGAT +
Preference number: 4 (lower is better)
Translates to: AVGNLAWSPPQIKLLLYVFRVSK*KVLVCD
Trigger: ATCGCATACTAGGACCTTGCACTTGCTTACTCTGAA...TACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCGAGACGATGATTGAGTaGATATCCAGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSETMIE*ISSCSL
Trigger: GAGAGAACAGCTGGATATGCACTCAATCATCGTCTC...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp GTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCCCAGAGACGATGATTGAGTaGATATCCAGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VMVASSQNNAVGNLAWSPETMIE*ISSCSL
Trigger: GAGAGAACAGCTGGATATGCACTCAATCATCGTCTC...TGGGCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTCGTAAAGCCAACTGCTaGACCAGCTCCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSRKANC*TSSSEY
Trigger: GTACTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACG...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCTCTCGTAAAGCCAACTaGTGCACCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KPKFKCAEFPIARRVMVASRKAN*CTSSSE
Trigger: CTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACGAGA...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp GTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCCCAGAGAATGGGCAGTTCTaGAGTGTACACTTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: VMVASSQNNAVGNLAWSPENGQF*SVHFLK
Trigger: CTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTC...TGGGCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTGAGAATGGGCAGTTCTaGAGTGTACACTTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLENGQF*SVHFLK
Trigger: CTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTC...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CCA 90 bp ATTTCCTGGGAAAGCATTGAAAGCCGATCTGACTGTGTAGGGGTTTCATCATCTGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: ISWESIESRSDCVGVSSSVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...AGATGATGAAACCCCTACACAGTCAGATCGGCTTTCAATGCTTTCCCAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413938.5
CDS-3UTR CCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTATTTCTTCAATAACCTaGTCTGCCGTGAAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLISSIT*SAVKRG
Trigger: ACCCCTCTTCACGGCAGACCAGGTTATTGAAGAAAT...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR TCA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAACAGGAGACGATGATTaGGTGCATATCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FPIARRVMVASSQNNAVGTGDDD*VHIQLF
Trigger: GAACAGCTGGATATGCACTCAATCATCGTCTCCTGT...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACCAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAATTTGACCAGTGGTaGAACAAGCAGCAAGCTACA +
Preference number: 4 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLKFDQW*NKQQAT
Trigger: TGTAGCTTGCTGCTTGTTTCACCACTGGTCAAATTT...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTACTGTTTCTCTCCACCTaGATTTCCAAAGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLLFLST*ISKGVA
Trigger: CGCCACACCTTTGGAAATTCAGGTGGAGAGAAACAG...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379245.8
ENST00000432869.5
CDS-3UTR TCA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATGTGCCGGGCATATaGCTTCTCTCATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FKCAEFPIARRVMVASSQNVPGI*LLSFFP
Trigger: TGGGAAGAATGAGAGAAGTCATATGCCCGGCACATT...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451623.5
CDS-3UTR GCA 90 bp GAAAGCATTGAAAGCCGATCTGACTGTGTAGGGGTTTCATCATCTTCTGGGTCCTTCAGAGTAAGCAAGTaGAAGGTCCTAGTATGCGAT +
Preference number: 4 (lower is better)
Translates to: ESIESRSDCVGVSSSSGSFRVSK*KVLVCD
Trigger: ATCGCATACTAGGACCTTGCACTTGCTTACTCTGAA...GGACCCAGAAGATGATGAAACCCCTACACAGTCAGATCGGCTTTCAATGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413938.5
CDS-3UTR GCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAATTTTTACTGGTCTaGCGTGAAGAGGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLKFLLV*REEGFI
Trigger: GATGAACCCCTCTTCACGGCAGACCAGTAAAAATTT...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305852.11
ENST00000413938.5
CDS-3UTR GCA 90 bp AATGCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGGGTCCGGTGATTCCTaGATCATTTCTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: NAVGNLAWSPPQIKLLLYGSGDS*IISSIS
Trigger: AGAAATTGAAGAAATGATGCAGGAATCACCGGACCC...ATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCCGTAAAGCCAACTGCTaGACCAGCTCCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SVHFLKHLRGHTLKVQFFRKANC*TSSSEY
Trigger: GTACTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACG...GAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGTTCAATAACCTGGTCTaGCGTGAAGAGGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: FKCAEFPIARRVMVASSQFNNLV*REEGFI
Trigger: GATGAACCCCTCTTCACGGCAGACCAGGTTATTGAA...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR GCA 90 bp TTCCACAGCAGCTCAGCATACTCTAATAAACGTCCTCCTCTTCCCCTTCGTAGCAATCAGGGTTTCATCTaGTCACATATTGTAGCGATG +
Preference number: 4 (lower is better)
Translates to: FHSSSAYSNKRPPLPLRSNQGFI*SHIVAM
Trigger: CATCGCTACAATATGTGAGCAGATGAAACCCTGATT...GCTACGAAGGGGAAGAGGAGGACGTTTATTAGAGTATGCTGAGCTGCTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414288.5
CDS-3UTR CCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: KPKFKCAEFPIARRVMVAVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
3UTR CAA 72 bp GTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTaGCTGCTCTATGTAGGACACAGAACTTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: VGNLAWSPPQIK*LLYVGHRTFRI
Trigger: TATTCTGAAAGTTCTGTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTACAGGAGACGATGATTaGGTGCATATCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSTGDDD*VHIQLF
Trigger: GAACAGCTGGATATGCACTCAATCATCGTCTCCTGT...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTATATGTGCCGGGCATATaGCTTCTCTCATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLYVPGI*LLSFFP
Trigger: TGGGAAGAATGAGAGAAGTCATATGCCCGGCACATA...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305852.11
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS-3UTR TCA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCCAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACCTGTTTCAATCTCTCTaGACAATACTGGTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHLFQSL*TILVGN
Trigger: ATTACCTACCAGTATTGTTCAGAGAGATTGAAACAG...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGTGGCGGAGGCCATTCTaGATGACATTTGAGATCCCT +
Preference number: 4 (lower is better)
Translates to: KQQATKSITTNSFNVSTKWRRPF*MTFEIP
Trigger: AGGGATCTCAAATGTCATTCAGAATGGCCTCCGCCA...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379245.8
CDS-3UTR GCA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCGGGTCCGGTGATTCCTaGATCATTTCTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: PKFKCAEFPIARRVMVASGSGDS*IISSIS
Trigger: AGAAATTGAAGAAATGATGCAGGAATCACCGGACCC...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CCA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCCACTGTCCTCCTTCATaGCACGAAGAATTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSHCPPS*HEEFLL
Trigger: TAACAAAAATTCTTCGTGCCATGAAGGAGGACAGTG...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
CDS-3UTR CCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: KQQATKSITTNSFNVSTKVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CCA 90 bp AGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCCAAATCAGTTCCACATaGCTGGGGAGGCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SVHFLKHLRGHTLKVQFFQISST*LGRPQN
Trigger: ATTCTGAGGCCTCCCCAGCCATGTGGAACTGATTTG...GAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413938.5
CDS-3UTR CCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTACACTGTCCTCCTTCATaGCACGAAGAACTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLHCPPS*HEELRV
Trigger: AACTCTCAGTTCTTCGTGCCATGAAGGAGGACAGTG...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441005.5
CDS-3UTR CCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCCACTGTCCTCCTTCATaGCACGAAGAATGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLHCPPS*HEECAG
Trigger: CCCGGCACATTCTTCGTGCCATGAAGGAGGACAGTG...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451623.5
CDS-3UTR TCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGTATGTGCCGGGCATATaGCTTCTCTCATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KQQATKSITTNSFNVSTKYVPGI*LLSFFP
Trigger: TGGGAAGAATGAGAGAAGTCATATGCCCGGCACATA...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305852.11
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS-3UTR GCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTGCAAGGTCCTAGTATaGGATGACTTCCAGTCTACA +
Preference number: 4 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSCKVLV*DDFQST
Trigger: TGTAGACTGGAAGTCATCGCATACTAGGACCTTGCA...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCTGCAAGGTCCTAGTATaGGATGACTTCCAGTCTACA +
Preference number: 4 (lower is better)
Translates to: KPKFKCAEFPIARRVMVACKVLV*DDFQST
Trigger: TGTAGACTGGAAGTCATCGCATACTAGGACCTTGCA...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAAATTTTTACTGGTCTaGCGTGAAGAGGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: FPIARRVMVASSQNNAVGKFLLV*REEGFI
Trigger: GATGAACCCCTCTTCACGGCAGACCAGTAAAAATTT...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305852.11
ENST00000413938.5
CDS-3UTR GCA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGGGGTCCGGTGATTCCTaGATCATTTCTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: FKCAEFPIARRVMVASSQGSGDS*IISSIS
Trigger: AGAAATTGAAGAAATGATGCAGGAATCACCGGACCC...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTCTCGTAAAGCCAACTaGTGCACCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLSRKAN*CTSSSE
Trigger: CTCTGAGGAGCTGGTGCAGCAGTTGGCTTTACGAGA...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp GTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGAAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VGNLAWSPPQIKLLLYVGNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...TCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413938.5
ENST00000432869.5
ENST00000451623.5
CDS-3UTR GCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGAGAATGGGCAGTTCTaGAGTGTACACTTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLENGQF*SVHFLK
Trigger: CTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTC...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCGAGAATGGGCAGTTCTaGAGTGTACACTTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: KPKFKCAEFPIARRVMVAENGQF*SVHFLK
Trigger: CTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTC...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CCA 90 bp TCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTGAAGTCGGAAATCTAGCTTaGAGCCCACCGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: SGFASSRTARLFCFNLSEVGNLA*SPPQIK
Trigger: CTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC...TTCAGAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CCA 90 bp GAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTAGCCATAAAAACAAATaGGCATACTGTCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: EWAVLQCTLSQAPQRTHTSHKNK*AYCQLM
Trigger: CATTAACTGACAGTATGCCCATTTGTTTTTATGGCT...AGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CCA 90 bp GTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGAAGCCATAAAAACAAATaGGCATACTGTCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: VGNLAWSPPQIKLLLYVGSHKNK*AYCQLM
Trigger: CATTAACTGACAGTATGCCCATTTGTTTTTATGGCT...TCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000413938.5
ENST00000432869.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCACTTACCCCTTTTTCTaGGAGGTTCAGAGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: KPKFKCAEFPIARRVMVATYPFF*EVQSKQ
Trigger: TTGCTTACTCTGAACCTCTCAGAAAAAGGGGTAAGT...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGCAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: FKCAEFPIARRVMVASSQQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAAATTTGACCAGTGGTaGAACAAGCAGCAAGCTACA +
Preference number: 4 (lower is better)
Translates to: KPKFKCAEFPIARRVMVAKFDQW*NKQQAT
Trigger: TGTAGCTTGCTGCTTGTTTCACCACTGGTCAAATTT...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAAAATTTGACCAGTGGTaGAACAAGCAGCAAGCTACA +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLKFDQW*NKQQAT
Trigger: TGTAGCTTGCTGCTTGTTTCACCACTGGTCAAATTT...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTTCAGAGTAAGCAAGTaGAAGGTCCTAGTATGCGAT +
Preference number: 4 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSFRVSK*KVLVCD
Trigger: ATCGCATACTAGGACCTTGCACTTGCTTACTCTGAA...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCGAGACGATGATTGAGTaGATATCCAGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SVHFLKHLRGHTLKVQFFETMIE*ISSCSL
Trigger: GAGAGAACAGCTGGATATGCACTCAATCATCGTCTC...GAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AATGCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: NAVGNLAWSPPQIKLLLYNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...ATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413938.5
ENST00000432869.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: NGQFCSVHFLKHLRGHTLNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...AAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AACAAGCTCGGAACTTTTTCACTGTCCTCCTTCATGGCACGAAGAATTTTTGTTGAGAATGGGCAGTTCTaGAGTGTACACTTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: NKLGTFSLSSFMARRIFVENGQF*SVHFLK
Trigger: CTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTC...AACAAAAATTCTTCGTGCCATGAAGGAGGACAGTGAAAAAGTTCCGAGCTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413938.5
CDS-3UTR CCA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGACACTGTCCTCCTTCATaGCACGAAGAATTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: FPIARRVMVASSQNNAVGHCPPS*HEEFLL
Trigger: TAACAAAAATTCTTCGTGCCATGAAGGAGGACAGTG...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
CDS-3UTR CCA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCAGCCATAAAAACAAATaGGCATACTGTCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSSHKNK*AYCQLM
Trigger: CATTAACTGACAGTATGCCCATTTGTTTTTATGGCT...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGACTTACCCCTTTTTCTaGGAGGTTCAGAGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: KQQATKSITTNSFNVSTKTYPFF*EVQSKQ
Trigger: TTGCTTACTCTGAACCTCTCAGAAAAAGGGGTAAGT...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTACAGCTCTTCATCATCTaGTGTATCAAAGAGCAAACT +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLQLFII*CIKEQT
Trigger: AGTTTGCTCTTTGATACATCAGATGATGAAGAGCTG...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTTATGTGCCGGGCATATaGCTTCTCTCATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HILVLLLQEQPVYSVSISYVPGI*LLSFFP
Trigger: TGGGAAGAATGAGAGAAGTCATATGCCCGGCACATA...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305852.11
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS-3UTR TCA 90 bp GTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCACAAAATTTGACCAGTGGTaGAACAAGCAGCAAGCTACA +
Preference number: 4 (lower is better)
Translates to: VHFLKHLRGHTLKVQFFTKFDQW*NKQQAT
Trigger: TGTAGCTTGCTGCTTGTTTCACCACTGGTCAAATTT...TGTGAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp TCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTGAATGCAAGGTCCTAGTATaGGATGACTTCCAGTCTACA +
Preference number: 4 (lower is better)
Translates to: SGFASSRTARLFCFNLSECKVLV*DDFQST
Trigger: TGTAGACTGGAAGTCATCGCATACTAGGACCTTGCA...TTCAGAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp AGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCTTCAGAGTAAGCAAGTaGAAGGTCCTAGTATGCGAT +
Preference number: 4 (lower is better)
Translates to: SVHFLKHLRGHTLKVQFFFRVSK*KVLVCD
Trigger: ATCGCATACTAGGACCTTGCACTTGCTTACTCTGAA...GAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PKFKCAEFPIARRVMVASNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTTCAATAACCTGGTCTaGCGTGAAGAGGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLFNNLV*REEGFI
Trigger: GATGAACCCCTCTTCACGGCAGACCAGGTTATTGAA...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR CCA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATGGTGTTCAGGTGTaGATGCTCCAAATAATCAAA +
Preference number: 4 (lower is better)
Translates to: FKCAEFPIARRVMVASSQNGVQV*MLQIIK
Trigger: TTTGATTATTTGGAGCATCCACACCTGAACACCATT...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305852.11
ENST00000413938.5
CDS-3UTR CCA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCAGCCATAAAAACAAATaGGCATACTGTCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: PKFKCAEFPIARRVMVASSHKNK*AYCQLM
Trigger: CATTAACTGACAGTATGCCCATTTGTTTTTATGGCT...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGCAGCTCTTCATCATCTaGTGTATCAAAGAGCAAACT +
Preference number: 4 (lower is better)
Translates to: KQQATKSITTNSFNVSTKQLFII*CIKEQT
Trigger: AGTTTGCTCTTTGATACATCAGATGATGAAGAGCTG...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCCAGCTCTTCATCATCTaGTGTATCAAAGAGCAAACT +
Preference number: 4 (lower is better)
Translates to: SVHFLKHLRGHTLKVQFFQLFII*CIKEQT
Trigger: AGTTTGCTCTTTGATACATCAGATGATGAAGAGCTG...GAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTACTGTTTCAATCTCTCTaGACAATACTGGTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLLFQSL*TILVGN
Trigger: ATTACCTACCAGTATTGTTCAGAGAGATTGAAACAG...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTGAGACGATGATTGAGTaGATATCCAGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HILVLLLQEQPVYSVSISETMIE*ISSCSL
Trigger: GAGAGAACAGCTGGATATGCACTCAATCATCGTCTC...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCGAGACGATGATTGAGTaGATATCCAGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLETMIE*ISSCSL
Trigger: GAGAGAACAGCTGGATATGCACTCAATCATCGTCTC...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR GCA 90 bp TCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTGAAGGGTCCGGTGATTCCTaGATCATTTCTTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: SGFASSRTARLFCFNLSEGSGDS*IISSIS
Trigger: AGAAATTGAAGAAATGATGCAGGAATCACCGGACCC...TTCAGAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CCA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAATGGTGTTCAGGTGTaGATGCTCCAAATAATCAAA +
Preference number: 4 (lower is better)
Translates to: KPKFKCAEFPIARRVMVANGVQV*MLQIIK
Trigger: TTTGATTATTTGGAGCATCCACACCTGAACACCATT...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305852.11
ENST00000413938.5
CDS-3UTR CCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCATTTCTTCAATAACCTaGTCTGCCGTGAAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLISSIT*SAVKRG
Trigger: ACCCCTCTTCACGGCAGACCAGGTTATTGAAGAAAT...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS-3UTR TCA 90 bp TCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTGAACAGCTCTTCATCATCTaGTGTATCAAAGAGCAAACT +
Preference number: 4 (lower is better)
Translates to: SGFASSRTARLFCFNLSEQLFII*CIKEQT
Trigger: AGTTTGCTCTTTGATACATCAGATGATGAAGAGCTG...TTCAGAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR TCA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGCTGTTTCAATCTCTCTaGACAATACTGGTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: KQQATKSITTNSFNVSTKLFQSL*TILVGN
Trigger: ATTACCTACCAGTATTGTTCAGAGAGATTGAAACAG...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: IARRVMVASSQNNAVGNLNLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR TCA 90 bp TTAAATGCCATTGATTTGACTGGAACCAGCAAAAGTGCTCATGATATTGATGAAAAATTTGACCAGTGGTaGAACAAGCAGCAAGCTACA +
Preference number: 4 (lower is better)
Translates to: LNAIDLTGTSKSAHDIDEKFDQW*NKQQAT
Trigger: TGTAGCTTGCTGCTTGTTTCACCACTGGTCAAATTT...TTCATCAATATCATGAGCACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS-3UTR CCA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCACTGTCCTCCTTCATaGCACGAAGAATTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: HILVLLLQEQPVYSVSISHCPPS*HEEFLL
Trigger: TAACAAAAATTCTTCGTGCCATGAAGGAGGACAGTG...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
CDS-3UTR TCA 90 bp TTAAATGCCATTGATTTGACTGGAACCAGCAAAAGTGCTCATGATATTGATGAACAGCTCTTCATCATCTaGTGTATCAAAGAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LNAIDLTGTSKSAHDIDEQLFII*CIKEQT
Trigger: AGTTTGCTCTTTGATACATCAGATGATGAAGAGCTG...TTCATCAATATCATGAGCACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
CDS-3UTR TCA 90 bp TTAAATGCCATTGATTTGACTGGAACCAGCAAAAGTGCTCATGATATTGATGAACAAGTTCAAATGTGCTaGGTTTCCAATAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LNAIDLTGTSKSAHDIDEQVQMC*VSNSKK
Trigger: CTTCTTGCTATTGGAAACTCAGCACATTTGAACTTG...TTCATCAATATCATGAGCACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS-3UTR TCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCCTGTTTCAATCTCTCTaGACAATACTGGTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLLFQSL*TILVGN
Trigger: ATTACCTACCAGTATTGTTCAGAGAGATTGAAACAG...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CCA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCAGCCATAAAAACAAATaGGCATACTGTCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLSHKNK*AYCQLM
Trigger: CATTAACTGACAGTATGCCCATTTGTTTTTATGGCT...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR GCA 90 bp TTAAATGCCATTGATTTGACTGGAACCAGCAAAAGTGCTCATGATATTGATGAAAATCTAGTTCATCAGTaGAGTTTAGATAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LNAIDLTGTSKSAHDIDENLVHQ*SLDKKA
Trigger: GGCTTTCTTATCTAAACTGCACTGATGAACTAGATT...TTCATCAATATCATGAGCACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS TCA 90 bp TCAGGGCATTCCAAATCTCGTCCCCCTGCAGGAGGCTGCGCTCCGTaGTGGGCCGCACGGCCGTCCTCGGGGGCTCGGCGCCCGGATCCG +
Preference number: 5 (lower is better)
Translates to: SGHSKSRPPAGGCAP*WAARPSSGARRPDP
Trigger: CGGATCCGGGCGCCGAGCCCCCGAGGACGGCCGTGCGGCCCATCACGGAGCGCAGCCTCCTGCAGGGGGACGAGATTTGGAATGCCCTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS CCA 90 bp CGGGCCACCTGCCACTGCCTTGGTGCAGAAATGCGAACTAGAAGATaGCATACGCTTCCTGGAGAGCAGAGTGGATCCCATGTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RATCHCLGAEMRTRR*HTLPGEQSGSHVPA
Trigger: GGCTGGCACATGGGATCCACTCTGCTCTCCAGGAAGCGTATGCCATCTTCTAGTTCGCATTTCTGCACCAAGGCAGTGGCAGGTGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS CCA 90 bp GGCATTCCAAATCAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGCAAAAGGCACTTCTTACATGGCGGCAGCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: GIPNQFHMAGEASES*QEAKGTSYMAAARE
Trigger: TTCCCTTGCTGCCGCCATGTAAGAAGTGCCTTTTGCCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGATTTGGAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413938.5
CDS GCA 90 bp CGTTGGAGAGCTGATTATTGCTTCCCACTCACTCTTCGGGCCACCTaGCACTGCCTTGGTGCAGAAATGCGAACTAGAAGATGGCATACG +
Preference number: 5 (lower is better)
Translates to: RWRADYCFPLTLRAT*HCLGAEMRTRRWHT
Trigger: CGTATGCCATCTTCTAGTTCGCATTTCTGCACCAAGGCAGTGGCAGGTGGCCCGAAGAGTGAGTGGGAAGCAATAATCAGCTCTCCAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS GCA 90 bp AGAGCTGATTATTGCTTCCCACTCACTCTTCGGGCCACCTGCCACTaGCTTGGTGCAGAAATGCGAACTAGAAGATGGCATACGCTTCCT +
Preference number: 5 (lower is better)
Translates to: RADYCFPLTLRATCH*LGAEMRTRRWHTLP
Trigger: AGGAAGCGTATGCCATCTTCTAGTTCGCATTTCTGCACCAAGGCAGTGGCAGGTGGCCCGAAGAGTGAGTGGGAAGCAATAATCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS-3UTR CAA 90 bp GAGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACCACCGCAGATAAAGTaGCTGCTCTATGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: ENGQFCSVHFLKHLRGHTPPQIK*LLYVGH
Trigger: GTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGG...TGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp GCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTAGGACACAGAAAGACACCACCGCAGATAAAGTaGCTGCTCTATGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: AWSPPQIKLLLYVGHRKTPPQIK*LLYVGH
Trigger: GTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGG...TGTCTTTCTGTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
CDS TCA 90 bp TCCGTCCTCACTAATGATCTGTCCTCCTTTCCACTGTCCTCAAGATaGCAGAGACCACCCTTCTCAAATTTCCCAGTGCCAATCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SVLTNDLSSFPLSSR*QRPPFSNFPVPICQ
Trigger: TTGGCAGATTGGCACTGGGAAATTTGAGAAGGGTGGTCTCTGTCATCTTGAGGACAGTGGAAAGGAGGACAGATCATTAGTGAGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484205.1
CDS CCA 90 bp TCCCATAATTATCTGTCAGGGCATTCCAAATCAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGGCAAAAGGCACTTCTTA +
Preference number: 5 (lower is better)
Translates to: SHNYLSGHSKSVPHG*GGLRIMAGGKRHFL
Trigger: TAAGAAGTGCCTTTTGCCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGATTTGGAATGCCCTGACAGATAATTATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413938.5
CDS-3UTR CAA 90 bp GCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTTGCTGCTCTATGTATTTCCTGGGAAAGCATaGAAAGCCGATCTGACTGTG +
Preference number: 5 (lower is better)
Translates to: AVGNLAWSPPQIKLLLYVFPGKA*KADLTV
Trigger: CACAGTCAGATCGGCTTTCAATGCTTTCCCAGGAAA...TACATAGAGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCCCACCGCAGATAAAGTaGCTGCTCTATGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSPPQIK*LLYVGH
Trigger: GTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGG...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCTGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 5 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGAGCTTTCCTGGGAAAGCATaGAAAGCCGATCTGACTGTG +
Preference number: 5 (lower is better)
Translates to: RVMVASSQNNAVGNLAWSFPGKA*KADLTV
Trigger: CACAGTCAGATCGGCTTTCAATGCTTTCCCAGGAAA...GCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAGCTTGGTGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 5 (lower is better)
Translates to: RRVMVASSQNNAVGNLAWCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...CCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACAGACCTCTTGAGAGTTaGAATTTCCTGGGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHRPLES*NFLGKH
Trigger: ATGCTTTCCCAGGAAATTCAAACTCTCAAGAGGTCT...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGCCACCGCAGATAAAGTaGCTGCTCTATGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: FKCAEFPIARRVMVASSQPPQIK*LLYVGH
Trigger: GTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGG...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGACCACCGCAGATAAAGTaGCTGCTCTATGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: FPIARRVMVASSQNNAVGPPQIK*LLYVGH
Trigger: GTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGG...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp TTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGTGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 5 (lower is better)
Translates to: FKCAEFPIARRVMVASSQCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...CTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000432869.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: RMGSSAVYTFSSTSEDTHMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...GTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp GAGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACAATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: ENGQFCSVHFLKHLRGHTMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...TGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS GCA 90 bp GCCGTGAAGAGGGGTTCATCATTAACACAGGAGACGATGATTGAGTaGATATCCAGCTGTTCTCTCAGCTCTTCATCATCTGATGTATCA +
Preference number: 5 (lower is better)
Translates to: AVKRGSSLTQETMIE*ISSCSLSSSSSDVS
Trigger: TGATACATCAGATGATGAAGAGCTGAGAGAACAGCTGGATATGCACTCAATCATCGTCTCCTGTGTTAATGATGAACCCCTCTTCACGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000357996.4
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
ENST00000464964.1
CDS-3UTR CAA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGATTTCCTGGGAAAGCATaGAAAGCCGATCTGACTGTG +
Preference number: 5 (lower is better)
Translates to: FPIARRVMVASSQNNAVGFPGKA*KADLTV
Trigger: CACAGTCAGATCGGCTTTCAATGCTTTCCCAGGAAA...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTCCACCGCAGATAAAGTaGCTGCTCTATGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSPPQIK*LLYVGH
Trigger: GTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGG...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTATTTCCTGGGAAAGCATaGAAAGCCGATCTGACTGTG +
Preference number: 5 (lower is better)
Translates to: IARRVMVASSQNNAVGNLFPGKA*KADLTV
Trigger: CACAGTCAGATCGGCTTTCAATGCTTTCCCAGGAAA...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCAGACCTCTTGAGAGTTaGAATTTCCTGGGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: PKFKCAEFPIARRVMVASRPLES*NFLGKH
Trigger: ATGCTTTCCCAGGAAATTCAAACTCTCAAGAGGTCT...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp GTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCACACCACCGCAGATAAAGTaGCTGCTCTATGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: VHFLKHLRGHTLKVQFFTPPQIK*LLYVGH
Trigger: GTGTCCTACATAGAGCAGCAACTTTATCTGCGGTGG...TGTGAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCTGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 5 (lower is better)
Translates to: SVHFLKHLRGHTLKVQFFCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...GAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp GTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTTCACATGTCGGAAATCTAGCTaGGAGCCCACCGCAGATAAA +
Preference number: 5 (lower is better)
Translates to: VHFLKHLRGHTLKVQFFTCRKSS*EPTADK
Trigger: TTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACA...TGTGAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp CCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: PKFKCAEFPIARRVMVASMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...GCTGGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp GAGAATGGGCAGTTCTGCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACATTAAATGCCATTGATTaGACTGGAACCAGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: ENGQFCSVHFLKHLRGHTLNAID*TGTSKS
Trigger: ACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA...TGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS TCA 90 bp AGAGACCACCCTTCTCAAATTTCCCAGTGCCAATCTGCCAACATCTaGTACCCACATGATTATGGTGCCATCTCACTAATTTTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: RDHPSQISQCQSANI*YPHDYGAISLIFFY
Trigger: GTAGAAGAAAATTAGTGAGATGGCACCATAATCATGTGGGTATCAGATGTTGGCAGATTGGCACTGGGAAATTTGAGAAGGGTGGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484205.1
CDS-3UTR CAA 90 bp TTTCCAATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: FPIARRVMVASSQNNAVGMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...TCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTATTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS GCA 90 bp AAGGTGCATTATCTTTGTCTGCTTTGTTCACTAAAGTATCCCAAGTaGCCAGATCATGGCCTGGTACAGAGTAGGCCTTCACTAAATATT +
Preference number: 5 (lower is better)
Translates to: KVHYLCLLCSLKYPK*PDHGLVQSRPSLNI
Trigger: AATATTTAGTGAAGGCCTACTCTGTACCAGGCCATGATCTGGGCACTTGGGATACTTTAGTGAACAAAGCAGACAAAGATAATGCACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475815.5
CDS CCA 90 bp TGGGTTATTTACAAGGAGCCTTCGCTCTGTAATAATACCGGAAAGTaGGTTACTATAATGTGCACCTCAATGAACTCTGTGCAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: WVIYKEPSLCNNTGK*VTIMCTSMNSVQQE
Trigger: TTCTTGCTGCACAGAGTTCATTGAGGTGCACATTATAGTAACCCACTTTCCGGTATTATTACAGAGCGAAGGCTCCTTGTAAATAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475815.5
CDS-3UTR CAA 90 bp ATAGCAAGAAGGGTAATGGTAGCCAGCTCTCAGAATAATGCTGTCGGAAATCTAAGACCTCTTGAGAGTTaGAATTTCCTGGGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: IARRVMVASSQNNAVGNLRPLES*NFLGKH
Trigger: ATGCTTTCCCAGGAAATTCAAACTCTCAAGAGGTCT...TAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCTTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp GCAGTGTACACTTTCTCAAGCACCTCAGAGGACACACACTTAAAGTACAATTCTAGACCTCTTGAGAGTTaGAATTTCCTGGGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: AVYTFSSTSEDTHLKYNSRPLES*NFLGKH
Trigger: ATGCTTTCCCAGGAAATTCAAACTCTCAAGAGGTCT...AGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AAACCCAAGTTCAAATGTGCTGAGTTTCCAATAGCAAGAAGGGTAATGGTAGCCATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: KPKFKCAEFPIARRVMVAMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...GGCTACCATTACCCTTCTTGCTATTGGAAACTCAGCACATTTGAACTTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS TCA 90 bp TTCTCAAATTTCCCAGTGCCAATCTGCCAACATCTGATACCCACATaGTTATGGTGCCATCTCACTAATTTTCTTCTACTACCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: FSNFPVPICQHLIPT*LWCHLTNFLLLPLL
Trigger: CAAGAGAGGTAGTAGAAGAAAATTAGTGAGATGGCACCATAATCATGTGGGTATCAGATGTTGGCAGATTGGCACTGGGAAATTTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484205.1
CDS CCA 90 bp CTAAGGCACCCAGAGCAGAAATGCACTGAATTCTCCATTAACCAATaGTGTTCAGGTGTGGATGCTCCAAATAATCAAAATTTTTACTGG +
Preference number: 5 (lower is better)
Translates to: LRHPEQKCTEFSINQ*CSGVDAPNNQNFYW
Trigger: CCAGTAAAAATTTTGATTATTTGGAGCATCCACACCTGAACACCATTGGTTAATGGAGAATTCAGTGCATTTCTGCTCTGGGTGCCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305852.11
ENST00000413938.5
CDS-3UTR CAA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTTTTCCTGGGAAAGCATaGAAAGCCGATCTGACTGTG +
Preference number: 5 (lower is better)
Translates to: HILVLLLQEQPVYSVSISFPGKA*KADLTV
Trigger: CACAGTCAGATCGGCTTTCAATGCTTTCCCAGGAAA...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS-3UTR CAA 90 bp GTTAACAAGCTCGGAACTTTTTCACTGTCCTCCTTCATGGCACGAAGAATTTTTAGACCTCTTGAGAGTTaGAATTTCCTGGGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: VNKLGTFSLSSFMARRIFRPLES*NFLGKH
Trigger: ATGCTTTCCCAGGAAATTCAAACTCTCAAGAGGTCT...AAAAATTCTTCGTGCCATGAAGGAGGACAGTGAAAAAGTTCCGAGCTTGTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413938.5
CDS TCA 90 bp AGAAAAGGAGCTTTGGACCCAAATATGTCCAGAGATTCCAAACTGTaGCAACCTATAAAGACATCTCGATGCTGGAATTATGATGACTTT +
Preference number: 5 (lower is better)
Translates to: RKGALDPNMSRDSKL*QPIKTSRCWNYDDF
Trigger: AAAGTCATCATAATTCCAGCATCGAGATGTCTTTATAGGTTGTCACAGTTTGGAATCTCTGGACATATTTGGGTCCAAAGCTCCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475815.5
CDS TCA 90 bp ATTGGGAAGTTACTGTCTAATGTATTAGCAAGGCGATGTATTTACTaGCTAATCCAAACCTCCCAGCCATCGCACCTATACCATTATAAA +
Preference number: 5 (lower is better)
Translates to: IGKLLSNVLARRCIY*LIQTSQPSHLYHYK
Trigger: TTTATAATGGTATAGGTGCGATGGCTGGGAGGTTTGGATTAGTCAGTAAATACATCGCCTTGCTAATACATTAGACAGTAACTTCCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484205.1
CDS-3UTR CAA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCATGCATATTCTGGTTTaGCTTCTTCAAGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLMHILV*LLQEQP
Trigger: GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCAT...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
ENST00000451623.5
CDS-3UTR CAA 90 bp AAGCAGCAAGCTACAAAATCCATCACCACCAACAGTTTCAATGTTAGCACTAAGTTAAATGCCATTGATTaGACTGGAACCAGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: KQQATKSITTNSFNVSTKLNAID*TGTSKS
Trigger: ACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA...CTTAGTGCTAACATTGAAACTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS-3UTR CAA 90 bp TCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTGAATTAAATGCCATTGATTaGACTGGAACCAGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: SGFASSRTARLFCFNLSELNAID*TGTSKS
Trigger: ACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA...TTCAGAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS TCA 90 bp AATGGGATTAATGACTGGCACAGTCAGGAAGATTTCCATAGCTACTaGATACTGGGAAATACAGCCAGAATTCTACATTTTACTAGAAAA +
Preference number: 5 (lower is better)
Translates to: NGINDWHSQEDFHSY*ILGNTARILHFTRK
Trigger: TTTTCTAGTAAAATGTAGAATTCTGGCTGTATTTCCCAGTATTCAGTAGCTATGGAAATCTTCCTGACTGTGCCAGTCATTAATCCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535666.2
CDS-3UTR CAA 90 bp ATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTCTTAAATGCCATTGATTaGACTGGAACCAGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: IFWFCFFKNSPFILFQSLLNAID*TGTSKS
Trigger: ACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA...GAGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS-3UTR CAA 90 bp CATATTCTGGTTTTGCTTCTTCAAGAACAGCCCGTTTATTCTGTTTCAATCTCTTTAAATGCCATTGATTaGACTGGAACCAGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: HILVLLLQEQPVYSVSISLNAID*TGTSKS
Trigger: ACTTTTGCTGGTTCCAGTCAAATCAATGGCATTTAA...AGAGATTGAAACAGAATAAACGGGCTGTTCTTGAAGAAGCAAAACCAGAATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305852.11
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000441005.5
CDS TCA 90 bp GTAATCAATGCCAAAGAGCAAAAATCATATTCCAAGCAATTAAATTaGCTGTGGGTGATCTTCTCAGAATTCTACAACTTCTGGAGATCA +
Preference number: 5 (lower is better)
Translates to: VINAKEQKSYSKQLN*LWVIFSEFYNFWRS
Trigger: TGATCTCCAGAAGTTGTAGAATTCTGAGAAGATCACCCACAGTCAATTTAATTGCTTGGAATATGATTTTTGCTCTTTGGCATTGATTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487282.5
CDS TCA 72 bp TCCAAATCTCGTCCCCCTGCAGGAGGCTGCGCTCCGTaGTGGGCCGCACGGCCGTCCTCGGGGGCTCGGCGC +
Preference number: 6 (lower is better)
Translates to: SKSRPPAGGCAP*WAARPSSGARR
Trigger: GCGCCGAGCCCCCGAGGACGGCCGTGCGGCCCATCACGGAGCGCAGCCTCCTGCAGGGGGACGAGATTTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379245.8
ENST00000405912.8
ENST00000451623.5
CDS CAA 72 bp GCTTCCCACTCACTCTTCGGGCCACCTGCCACTGCCTaGGTGCAGAAATGCGAACTAGAAGATGGCATACGC +
Preference number: 6 (lower is better)
Translates to: ASHSLFGPPATA*VQKCELEDGIR
Trigger: GCGTATGCCATCTTCTAGTTCGCATTTCTGCACCAAGGCAGTGGCAGGTGGCCCGAAGAGTGAGTGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS GCA 72 bp GGCATACGCTTCCTGGAGAGCAGAGTGGATCCCATGTaGCAGCCAGGCCCCCAAAAACTTCTCCAAAGACTT +
Preference number: 6 (lower is better)
Translates to: GIRFLESRVDPM*QPGPQKLLQRL
Trigger: AAGTCTTTGGAGAAGTTTTTGGGGGCCTGGCTGGCACATGGGATCCACTCTGCTCTCCAGGAAGCGTATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS CAA 90 bp CTGATTATTGCTTCCCACTCACTCTTCGGGCCACCTGCCACTGCCTaGGTGCAGAAATGCGAACTAGAAGATGGCATACGCTTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: LIIASHSLFGPPATA*VQKCELEDGIRFLE
Trigger: CTCCAGGAAGCGTATGCCATCTTCTAGTTCGCATTTCTGCACCAAGGCAGTGGCAGGTGGCCCGAAGAGTGAGTGGGAAGCAATAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS GCA 72 bp TATTGCTTCCCACTCACTCTTCGGGCCACCTGCCACTaGCTTGGTGCAGAAATGCGAACTAGAAGATGGCAT +
Preference number: 6 (lower is better)
Translates to: YCFPLTLRATCH*LGAEMRTRRWH
Trigger: ATGCCATCTTCTAGTTCGCATTTCTGCACCAAGGCAGTGGCAGGTGGCCCGAAGAGTGAGTGGGAAGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS GCA 72 bp GCTGATTATTGCTTCCCACTCACTCTTCGGGCCACCTaGCACTGCCTTGGTGCAGAAATGCGAACTAGAAGA +
Preference number: 6 (lower is better)
Translates to: ADYCFPLTLRAT*HCLGAEMRTRR
Trigger: TCTTCTAGTTCGCATTTCTGCACCAAGGCAGTGGCAGGTGGCCCGAAGAGTGAGTGGGAAGCAATAATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS CCA 72 bp TGCCACTGCCTTGGTGCAGAAATGCGAACTAGAAGATaGCATACGCTTCCTGGAGAGCAGAGTGGATCCCAT +
Preference number: 6 (lower is better)
Translates to: CHCLGAEMRTRR*HTLPGEQSGSH
Trigger: ATGGGATCCACTCTGCTCTCCAGGAAGCGTATGCCATCTTCTAGTTCGCATTTCTGCACCAAGGCAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487919.5
CDS TCA 72 bp ACTAATGATCTGTCCTCCTTTCCACTGTCCTCAAGATaGCAGAGACCACCCTTCTCAAATTTCCCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: TNDLSSFPLSSR*QRPPFSNFPVP
Trigger: TGGCACTGGGAAATTTGAGAAGGGTGGTCTCTGTCATCTTGAGGACAGTGGAAAGGAGGACAGATCATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484205.1
CDS CCA 72 bp TTAACAAGCTCGGAACTTTTTCACTGTCCTCCTTCATaGCACGAAGAATGTGCCGGGCATATGACTTCTCTC +
Preference number: 6 (lower is better)
Translates to: LTSSELFHCPPS*HEECAGHMTSL
Trigger: GAGAGAAGTCATATGCCCGGCACATTCTTCGTGCCATGAAGGAGGACAGTGAAAAAGTTCCGAGCTTGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451623.5
CDS TCA 72 bp GAAGAGGGGTTCATCATTAACACAGGAGACGATGATTaGGTGCATATCCAGCTGTTCTCTCAGCTCTTCATC +
Preference number: 6 (lower is better)
Translates to: EEGFIINTGDDD*VHIQLFSQLFI
Trigger: GATGAAGAGCTGAGAGAACAGCTGGATATGCACTCAATCATCGTCTCCTGTGTTAATGATGAACCCCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000357996.4
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
ENST00000464964.1
CDS GCA 72 bp GGAGCAGAATTAGATGGGTGCTGCTTCCCTAAGGCATaGGGTATAGGTAGGTTCACAATTATAGTCCTTTCA +
Preference number: 6 (lower is better)
Translates to: GAELDGCCFPKA*GIGRFTIIVLS
Trigger: TGAAAGGACTATAATTGTGAACCTACCTATACCGCATGCCTTAGGGAAGCAGCACCCATCTAATTCTGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432869.5
CDS GCA 72 bp TATCTTTGTCTGCTTTGTTCACTAAAGTATCCCAAGTaGCCAGATCATGGCCTGGTACAGAGTAGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: YLCLLCSLKYPK*PDHGLVQSRPS
Trigger: TGAAGGCCTACTCTGTACCAGGCCATGATCTGGGCACTTGGGATACTTTAGTGAACAAAGCAGACAAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475815.5
CDS TCA 72 bp GTTCAGAGTAAGCAAGTGCAAGGTCCTAGTATGCGATaGCTTCCAGTCTACAGGCATCACATTCCCATAATT +
Preference number: 6 (lower is better)
Translates to: VQSKQVQGPSMR*LPVYRHHIPII
Trigger: AATTATGGGAATGTGATGCCTGTAGACTGGAAGTCATCGCATACTAGGACCTTGCACTTGCTTACTCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000357996.4
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
ENST00000535666.2
CDS TCA 72 bp GTGCATATCCAGCTGTTCTCTCAGCTCTTCATCATCTaGTGTATCAAAGAGCAAACTGTCACTTACCTCCTC +
Preference number: 6 (lower is better)
Translates to: VHIQLFSQLFII*CIKEQTVTYLL
Trigger: GAGGAGGTAAGTGACAGTTTGCTCTTTGATACATCAGATGATGAAGAGCTGAGAGAACAGCTGGATATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464964.1
CDS GCA 72 bp AGGGGTTCATCATTAACACAGGAGACGATGATTGAGTaGATATCCAGCTGTTCTCTCAGCTCTTCATCATCT +
Preference number: 6 (lower is better)
Translates to: RGSSLTQETMIE*ISSCSLSSSSS
Trigger: AGATGATGAAGAGCTGAGAGAACAGCTGGATATGCACTCAATCATCGTCTCCTGTGTTAATGATGAACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000305852.11
ENST00000357996.4
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
ENST00000464964.1
CDS TCA 72 bp GTGCATATCCAGCTGTTCTCTCAGCTCTTCATCATCTaGTGTATCAAAGAGCAAACTGTCACTTACCCCTTT +
Preference number: 6 (lower is better)
Translates to: VHIQLFSQLFII*CIKEQTVTYPF
Trigger: AAAGGGGTAAGTGACAGTTTGCTCTTTGATACATCAGATGATGAAGAGCTGAGAGAACAGCTGGATATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305852.11
ENST00000357996.4
ENST00000379245.8
ENST00000405912.8
ENST00000413938.5
ENST00000451623.5
CDS TCA 72 bp CCTTCTCAAATTTCCCAGTGCCAATCTGCCAACATCTaGTACCCACATGATTATGGTGCCATCTCACTAATT +
Preference number: 6 (lower is better)
Translates to: PSQISQCQSANI*YPHDYGAISLI
Trigger: AATTAGTGAGATGGCACCATAATCATGTGGGTATCAGATGTTGGCAGATTGGCACTGGGAAATTTGAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484205.1
CDS GCA 72 bp CACCTCAATGAACTCTGTGCAGCAAGAAAACCTCAGTaGTGCAGATCAAGCAAACTAGAGAAACTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: HLNELCAARKPQ*CRSSKLEKLLK
Trigger: CTTTAAGAGTTTCTCTAGTTTGCTTGATCTGCAGCACTGAGGTTTTCTTGCTGCACAGAGTTCATTGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475815.5
CDS CCA 72 bp TACAAGGAGCCTTCGCTCTGTAATAATACCGGAAAGTaGGTTACTATAATGTGCACCTCAATGAACTCTGTG +
Preference number: 6 (lower is better)
Translates to: YKEPSLCNNTGK*VTIMCTSMNSV
Trigger: CACAGAGTTCATTGAGGTGCACATTATAGTAACCCACTTTCCGGTATTATTACAGAGCGAAGGCTCCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475815.5
CDS TCA 72 bp ACACTATTGGTTCAATTCCTAACTTACCCCTTTTTCTaGGAGGTTCAGAGTAAGCAAGTGCAAGGTCCTAGT +
Preference number: 6 (lower is better)
Translates to: TLLVQFLTYPFF*EVQSKQVQGPS
Trigger: ACTAGGACCTTGCACTTGCTTACTCTGAACCTCTCAGAAAAAGGGGTAAGTTAGGAATTGAACCAATAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535666.2
CDS TCA 72 bp GCTTTGGACCCAAATATGTCCAGAGATTCCAAACTGTaGCAACCTATAAAGACATCTCGATGCTGGAATTAT +
Preference number: 6 (lower is better)
Translates to: ALDPNMSRDSKL*QPIKTSRCWNY
Trigger: ATAATTCCAGCATCGAGATGTCTTTATAGGTTGTCACAGTTTGGAATCTCTGGACATATTTGGGTCCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475815.5
CDS TCA 72 bp AATGACTGGCACAGTCAGGAAGATTTCCATAGCTACTaGATACTGGGAAATACAGCCAGAATTCTACATTTT +
Preference number: 6 (lower is better)
Translates to: NDWHSQEDFHSY*ILGNTARILHF
Trigger: AAAATGTAGAATTCTGGCTGTATTTCCCAGTATTCAGTAGCTATGGAAATCTTCCTGACTGTGCCAGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535666.2
CDS GCA 72 bp TTATTTTCGGTAAGAATATCCCACTTACCTGAGAGTTaGTTCCCTGATTTAAAATTTCCAAACAGTGGAGAC +
Preference number: 6 (lower is better)
Translates to: LFSVRISHLPES*FPDLKFPNSGD
Trigger: GTCTCCACTGTTTGGAAATTTTAAATCAGGGAAGCAACTCTCAGGTAAGTGGGATATTCTTACCGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475815.5
CDS TCA 72 bp GCCAAAGAGCAAAAATCATATTCCAAGCAATTAAATTaGCTGTGGGTGATCTTCTCAGAATTCTACAACTTC +
Preference number: 6 (lower is better)
Translates to: AKEQKSYSKQLN*LWVIFSEFYNF
Trigger: GAAGTTGTAGAATTCTGAGAAGATCACCCACAGTCAATTTAATTGCTTGGAATATGATTTTTGCTCTTTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487282.5
CDS TCA 72 bp CAGGTCACTACACTCATTAAAAAGTTAACTCCGTGTTaGGATTCCAATACTCTCAGTATATTAAACCAAAGG +
Preference number: 6 (lower is better)
Translates to: QVTTLIKKLTPC*DSNTLSILNQR
Trigger: CCTTTGGTTTAATATACTGAGAGTATTGGAATCTCAACACGGAGTTAACTTTTTAATGAGTGTAGTGACCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535666.2