Pregenerated sensors for FEV (Homo sapiens)
Ensembl gene IDs: ENSG00000163497Ensembl transcript IDs: ENST00000295727.2, ENST00000470119.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTCGGTCCCGTCCCCCTGCTAAGTGCGGCAGGTGGAGTAAACTCTaGATTAGAGGACGGTTGACGGAGGCTCCCGGGCCCTCCCCGGGA | + |
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Preference number: 1 (lower is better) Translates to: LRSRPPAKCGRWSKL*IRGRLTEAPGPSPG Trigger: TCCCGGGGAGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACGGGACCGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR TCA 90 bp | CTGCTAAGTGCGGCAGGTGGAGTAAACTCTGGATTAGAGGACGGTTaGCGGAGGCTCCCGGGCCCTCCCCGGGATGCCGATGGGATCGGG | + |
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Preference number: 1 (lower is better) Translates to: LLSAAGGVNSGLEDG*RRLPGPPRDADGIG Trigger: CCCGATCCCATCGGCATCCCGGGGAGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR GCA 90 bp | GGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAAACCTaGTCAGGTCCCAGGAAGGAGGACCGTGAGAGGCCTCCACGTGCT | + |
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Preference number: 1 (lower is better) Translates to: GRGPCVTEDGGFHQT*SGPRKEDRERPPRA Trigger: AGCACGTGGAGGCCTCTCACGGTCCTCCTTCCTGGGACCTGAGCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CCA 90 bp | GGATTGAGGGAGCTTCGGTCCCGTCCCCCTGCTAAGTGCGGCAGGTaGAGTAAACTCTGGATTAGAGGACGGTTGACGGAGGCTCCCGGG | + |
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Preference number: 1 (lower is better) Translates to: GLRELRSRPPAKCGR*SKLWIRGRLTEAPG Trigger: CCCGGGAGCCTCCGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACGGGACCGAAGCTCCCTCAATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR GCA 90 bp | ACCAGACAAGGATTGAGGGAGCTTCGGTCCCGTCCCCCTGCTAAGTaGGGCAGGTGGAGTAAACTCTGGATTAGAGGACGGTTGACGGAG | + |
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Preference number: 1 (lower is better) Translates to: TRQGLRELRSRPPAK*GRWSKLWIRGRLTE Trigger: CTCCGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACGGGACCGAAGCTCCCTCAATCCTTGTCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CCA 90 bp | AAAGTGAAAGAGGGCGCACATCGCCCTCCTCAGGGGACTGCGGGGTaGGACAGGAGCAAATCTAGTACCAGACAAGGATTGAGGGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: KVKEGAHRPPQGTAG*DRSKSSTRQGLREL Trigger: AAGCTCCCTCAATCCTTGTCTGGTACTAGATTTGCTCCTGTCCCACCCCGCAGTCCCCTGAGGAGGGCGATGTGCGCCCTCTTTCACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CCA 90 bp | GAGGACCGTGAGAGGCCTCCACGTGCTGAGGTGGGAGCAGTTCCTTaGGGAAGAGCAAAAGTGGGAAAAGATTTGGCACTCGTTAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: EDRERPPRAEVGAVP*GRAKVGKDLALVKE Trigger: CTCTTTAACGAGTGCCAAATCTTTTCCCACTTTTGCTCTTCCCCAAGGAACTGCTCCCACCTCAGCACGTGGAGGCCTCTCACGGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CAA 90 bp | CCTGCTAAGTGCGGCAGGTGGAGTAAACTCTGGATTAGAGGACGGTaGACGGAGGCTCCCGGGCCCTCCCCGGGATGCCGATGGGATCGG | + |
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Preference number: 2 (lower is better) Translates to: PAKCGRWSKLWIRGR*TEAPGPSPGCRWDR Trigger: CCGATCCCATCGGCATCCCGGGGAGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCCCCCTGCTAAGTGCGGCAGGTGGAGTAAACTCTGGATTAGAGGACGGTTGGGGCCCTCCCCGGGATaGCGATGGGATCGGGCGAGA | + |
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Preference number: 2 (lower is better) Translates to: RPPAKCGRWSKLWIRGRLGPSPG*RWDRAR Trigger: TCTCGCCCGATCCCATCGGCATCCCGGGGAGGGCCC...CAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CAA 90 bp | GGGACTGCGGGGTGGGACAGGAGCAAATCTAGTACCAGACAAGGATaGAGGGAGCTTCGGTCCCGTCCCCCTGCTAAGTGCGGCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GTAGWDRSKSSTRQG*RELRSRPPAKCGRW Trigger: CCACCTGCCGCACTTAGCAGGGGGACGGGACCGAAGCTCCCTCAATCCTTGTCTGGTACTAGATTTGCTCCTGTCCCACCCCGCAGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR CCA 90 bp | AAACACACCGGGAGTTTCTCCTGGGAGTGTGGGGACAGGAGGAAGGGGGCCGTGCAGGGGACTGCGGGGTaGGACAGGAGCAAATCTAGT | + |
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Preference number: 2 (lower is better) Translates to: KHTGSFSWECGDRRKGAVQGTAG*DRSKSS Trigger: ACTAGATTTGCTCCTGTCCCACCCCGCAGTCCCCTG...CACGGCCCCCTTCCTCCTGTCCCCACACTCCCAGGAGAAACTCCCGGTGTGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAAACACACCGGGAGTTTCTCCTGGGAGTGTGGGGACAGGAGGAAGGGGGCCGGCTTTCACCAAACCTaGTCAGGTCCCAGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QKHTGSFSWECGDRRKGAGFHQT*SGPRKE Trigger: CTCCTTCCTGGGACCTGAGCAGGTTTGGTGAAAGCC...GGCCCCCTTCCTCCTGTCCCCACACTCCCAGGAGAAACTCCCGGTGTGTTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCACGGAGGACGGTGGCTTTCACCAAACCTGCTCAGGTCCCAGGAAGGAGGAGTACCAGACAAGGATTaGGGGAGCTTCGGTCCCGTC | + |
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Preference number: 2 (lower is better) Translates to: CHGGRWLSPNLLRSQEGGVPDKD*GSFGPV Trigger: GACGGGACCGAAGCTCCCTCAATCCTTGTCTGGTAC...TCCTCCTTCCTGGGACCTGAGCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGACCGTGAGAGGCCTCCACGTGCTGAGGTGGGAGCAGTTCCTTGGGGAAATGCACTGGAGTGGTaGGGAGACAAGAGAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KEDRERPPRAEVGAVPWGNALEW*GDKRGP Trigger: TGGACCTCTCTTGTCTCCCCACCACTCCAGTGCATT...TCCCCAAGGAACTGCTCCCACCTCAGCACGTGGAGGCCTCTCACGGTCCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAAACCTGCGGAAATGCACTGGAGTaGTGGGGAGACAAGAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: TGGRGPCVTEDGGFHQTCGNALE*WGDKRG Trigger: ACCTCTCTTGTCTCCCCACCACTCCAGTGCATTTCC...GCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCCTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAAACCTGCAAGTGGGAAAAGATTTaGCACTCGTTAAAGAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: TGGRGPCVTEDGGFHQTCKWEKI*HSLKSS Trigger: ACTACTCTTTAACGAGTGCCAAATCTTTTCCCACTT...GCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCCTCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR TCA 72 bp | GCGGCAGGTGGAGTAAACTCTGGATTAGAGGACGGTTaGCGGAGGCTCCCGGGCCCTCCCCGGGATGCCGAT | + |
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Preference number: 3 (lower is better) Translates to: AAGGVNSGLEDG*RRLPGPPRDAD Trigger: ATCGGCATCCCGGGGAGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR CAA 90 bp | ACCAGACAAGGATTGAGGGAGCTTCGGTCCCGTCCCCCTGCTAAGTGCGGCAGGTGGATTAGAGGACGGTaGACGGAGGCTCCCGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: TRQGLRELRSRPPAKCGRWIRGR*TEAPGP Trigger: GGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCA...CCTGCCGCACTTAGCAGGGGGACGGGACCGAAGCTCCCTCAATCCTTGTCTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CCA 72 bp | CGTCCCCCTGCTAAGTGCGGCAGGTGGAGTAAACTCTaGATTAGAGGACGGTTGACGGAGGCTCCCGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: RPPAKCGRWSKL*IRGRLTEAPGP Trigger: GGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR GCA 72 bp | CCGTGTGTCACGGAGGACGGTGGCTTTCACCAAACCTaGTCAGGTCCCAGGAAGGAGGACCGTGAGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PCVTEDGGFHQT*SGPRKEDRERP Trigger: AGGCCTCTCACGGTCCTCCTTCCTGGGACCTGAGCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACACACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR GCA 72 bp | GGATTGAGGGAGCTTCGGTCCCGTCCCCCTGCTAAGTaGGGCAGGTGGAGTAAACTCTGGATTAGAGGACGG | + |
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Preference number: 3 (lower is better) Translates to: GLRELRSRPPAK*GRWSKLWIRGR Trigger: CCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACGGGACCGAAGCTCCCTCAATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CCA 72 bp | GGAAGGAGGACCGTGAGAGGCCTCCACGTGCTGAGGTaGGAGCAGTTCCTTGGGGAAGAGCAAAAGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GRRTVRGLHVLR*EQFLGEEQKWE Trigger: TTCCCACTTTTGCTCTTCCCCAAGGAACTGCTCCCACCTCAGCACGTGGAGGCCTCTCACGGTCCTCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCGGAAATGCACTGGAGTGGTGGGGAGACAAGAGAGGTCCACAAATCCCAGTACCAGACAAGGATaGAGGGAGCTTCGGTCCCGT | + |
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Preference number: 3 (lower is better) Translates to: ARRKCTGVVGRQERSTNPSTRQG*RELRSR Trigger: ACGGGACCGAAGCTCCCTCAATCCTTGTCTGGTACT...GGGATTTGTGGACCTCTCTTGTCTCCCCACCACTCCAGTGCATTTCCGCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR TCA 72 bp | GGTGGGACAGGAGCAAATCTAGTACCAGACAAGGATTaGGGGAGCTTCGGTCCCGTCCCCCTGCTAAGTGCG | + |
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Preference number: 3 (lower is better) Translates to: GGTGANLVPDKD*GSFGPVPLLSA Trigger: CGCACTTAGCAGGGGGACGGGACCGAAGCTCCCTCAATCCTTGTCTGGTACTAGATTTGCTCCTGTCCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR GCA 90 bp | ATTAGAGGACGGTTGACGGAGGCTCCCGGGCCCTCCCCGGGATGCCGATGGGATGGGCCCTCCCCGGGATaGCGATGGGATCGGGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: IRGRLTEAPGPSPGCRWDGPSPG*RWDRAR Trigger: TCTCGCCCGATCCCATCGGCATCCCGGGGAGGGCCC...ATCCCATCGGCATCCCGGGGAGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCCTGGGAGTGTGGGGACAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGGGCGAGGCAGGCTTTaGGCTCGGTGGCACCGATCC | + |
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Preference number: 4 (lower is better) Translates to: FLLGVWGQEEGGRVSRRTGRGRL*ARWHRS Trigger: GGATCGGTGCCACCGAGCGCAAAGCCTGCCTCGCCC...CGTCCTCCGTGACACACGGCCCCCTTCCTCCTGTCCCCACACTCCCAGGAGAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR TCA 90 bp | AAACACACCGGGAGTTTCTCCTGGGAGTGTGGGGACAGGAGGAAGGGGGCCGTGTGTCCGCTGCCTTTCTaGACCGCGGGGCTCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KHTGSFSWECGDRRKGAVCPLPF*TAGLSG Trigger: GCCGCTGAGCCCCGCGGTTCAGAAAGGCAGCGGACA...CACGGCCCCCTTCCTCCTGTCCCCACACTCCCAGGAGAAACTCCCGGTGTGTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CAA 72 bp | TGCGGCAGGTGGAGTAAACTCTGGATTAGAGGACGGTaGACGGAGGCTCCCGGGCCCTCCCCGGGATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: CGRWSKLWIRGR*TEAPGPSPGCR Trigger: TCGGCATCCCGGGGAGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGGCGGAAATGCACTGGAGTGGTGGGGAGACAAGAGAGGTCCACAAATCCCGCCCTCCCACGCGATaGAGCCGGCGTTCGCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SQAEMHWSGGETREVHKSRPPTR*SRRSRG Trigger: ACCGCGCGAACGCCGGCTGCATCGCGTGGGAGGGCG...GGATTTGTGGACCTCTCTTGTCTCCCCACCACTCCAGTGCATTTCCGCCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGGCGGAAATGCACTGGAGTGGTGGGGAGACAAGAGAGGTCCACAAATCCCCCCAAGTGCGAGGCTaGGGCCACGGCCCCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SQAEMHWSGGETREVHKSPQVRG*GHGPEG Trigger: CCCTTCGGGGCCGTGGCCGCAGCCTCGCACTTGGGG...GGATTTGTGGACCTCTCTTGTCTCCCCACCACTCCAGTGCATTTCCGCCTGGCT 64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | GGGGACAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAAACACCGGGAGTTTCTCCTaGGAGTGTGGGGACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GDRRKGAVCHGGRWLSPNTGSFS*ECGDRR Trigger: CCTCCTGTCCCCACACTCCCAGGAGAAACTCCCGGT...GTTTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCCTCCTGTCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR TCA 90 bp | TGTCACGGAGGACGGTGGCTTTCACCAAACCTGCTCAGGTCCCAGGAAGGAGGAAGCTTGAACTCGCCGTaGCCGCCCTCCCACGCGATG | + |
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Preference number: 4 (lower is better) Translates to: CHGGRWLSPNLLRSQEGGSLNSP*PPSHAM Trigger: CATCGCGTGGGAGGGCGGTCACGGCGAGTTCAAGCT...TCCTCCTTCCTGGGACCTGAGCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR GCA 90 bp | AAAGTGAAAGAGGGCGCACATCGCCCTCCTCAGGGGACTGCGGGGTGGGACAGGCGTCCCCCTGCTAAGTaGGGCAGGTGGAGTAAACTC | + |
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Preference number: 4 (lower is better) Translates to: KVKEGAHRPPQGTAGWDRRPPAK*GRWSKL Trigger: GAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACG...CCTGTCCCACCCCGCAGTCCCCTGAGGAGGGCGATGTGCGCCCTCTTTCACTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | GTGAGAGGCCTCCACGTGCTGAGGTGGGAGCAGTTCCTTGGGGAAGAGCAAAAGAGGCTTTGCGCTCGGTaGCACCGATCCCCGCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: VRGLHVLRWEQFLGEEQKRLCAR*HRSPPE Trigger: TTCGGGCGGGGATCGGTGCCACCGAGCGCAAAGCCT...CTTTTGCTCTTCCCCAAGGAACTGCTCCCACCTCAGCACGTGGAGGCCTCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | AAGGGTCAGAAACACACCGGGAGTTTCTCCTGGGAGTGTGGGGACAGGAGGAAGGCTGCAAGCTGGGACTaGGGTAGAGCGCGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KGQKHTGSFSWECGDRRKAASWD*GRARRW Trigger: CCACCGCCGCGCTCTACCCCAGTCCCAGCTTGCAGC...CTTCCTCCTGTCCCCACACTCCCAGGAGAAACTCCCGGTGTGTTTCTGACCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGACAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAACTCCACGTGCTGAGGTaGGAGCAGTTCCTTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VGTGGRGPCVTEDGGFHQLHVLR*EQFLGE Trigger: TTCCCCAAGGAACTGCTCCCACCTCAGCACGTGGAG...TTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCCTCCTGTCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR TCA 90 bp | AGTAAACTCTGGATTAGAGGACGGTTGACGGAGGCTCCCGGGCCCTCCCCGGGAGTACCAGACAAGGATTaGGGGAGCTTCGGTCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: SKLWIRGRLTEAPGPSPGVPDKD*GSFGPV Trigger: GACGGGACCGAAGCTCCCTCAATCCTTGTCTGGTAC...TCCCGGGGAGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCAGAGTTTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGACAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAATGTCACGGAGGACGGTaGCTTTCACCAAACCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VGTGGRGPCVTEDGGFHQCHGGR*LSPNLL Trigger: GAGCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACA...TTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCCTCCTGTCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR TCA 90 bp | CGTCCCCCTGCTAAGTGCGGCAGGTGGAGTAAACTCTGGATTAGAGGACGGTTGGGTTCTTCCCGTCCTTaGAGAGACCGTCTCCGACGG | + |
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Preference number: 4 (lower is better) Translates to: RPPAKCGRWSKLWIRGRLGSSRP*RDRLRR Trigger: CCGTCGGAGACGGTCTCTTCAAGGACGGGAAGAACC...CAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | CAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAAACCTGCTAATGCACTGGAGTGGTaGGGAGACAAGAGAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QEEGGRVSRRTVAFTKPANALEW*GDKRGP Trigger: TGGACCTCTCTTGTCTCCCCACCACTCCAGTGCATT...AGCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCCTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGGCGGAAATGCACTGGAGTGGTGGGGAGACAAGAGAGGTCCACAAATCCCAGGGGACTGCGGGGTaGGACAGGAGCAAATCTAGT | + |
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Preference number: 4 (lower is better) Translates to: SQAEMHWSGGETREVHKSQGTAG*DRSKSS Trigger: ACTAGATTTGCTCCTGTCCCACCCCGCAGTCCCCTG...GGATTTGTGGACCTCTCTTGTCTCCCCACCACTCCAGTGCATTTCCGCCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| 3UTR CAA 72 bp | GGGTGGGACAGGAGCAAATCTAGTACCAGACAAGGATaGAGGGAGCTTCGGTCCCGTCCCCCTGCTAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GWDRSKSSTRQG*RELRSRPPAKC Trigger: GCACTTAGCAGGGGGACGGGACCGAAGCTCCCTCAATCCTTGTCTGGTACTAGATTTGCTCCTGTCCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCGGTCCCGTCCCCCTGCTAAGTGCGGCAGGTGGAGTAAACTCTGGATTAGGCTTTCACCAAACCTaGTCAGGTCCCAGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SFGPVPLLSAAGGVNSGLGFHQT*SGPRKE Trigger: CTCCTTCCTGGGACCTGAGCAGGTTTGGTGAAAGCC...TAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACGGGACCGAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | AAGGAGGACCGTGAGAGGCCTCCACGTGCTGAGGTGGGAGCAGTTCCTTGGGGAAGGTGGAGTAAACTCTaGATTAGAGGACGGTTGACG | + |
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Preference number: 4 (lower is better) Translates to: KEDRERPPRAEVGAVPWGRWSKL*IRGRLT Trigger: CGTCAACCGTCCTCTAATCCAGAGTTTACTCCACCT...TCCCCAAGGAACTGCTCCCACCTCAGCACGTGGAGGCCTCTCACGGTCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR TCA 90 bp | AGGACCGTGAGAGGCCTCCACGTGCTGAGGTGGGAGCAGTTCCTTGGGGAAGAGCATGCACCTTGCTCATaGTGTTCTTGTCGTAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: RTVRGLHVLRWEQFLGEEHAPCS*CSCRSS Trigger: ACTACTACGACAAGAACATCATGAGCAAGGTGCATG...CTCTTCCCCAAGGAACTGCTCCCACCTCAGCACGTGGAGGCCTCTCACGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | TTGAATGGGGCTTCTAGGAGCCAGGCGGAAATGCACTGGAGTGGTGGGGAGACAGGAAATGCACTGGAGTaGTGGGGAGACAAGAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LNGASRSQAEMHWSGGETGNALE*WGDKRG Trigger: ACCTCTCTTGTCTCCCCACCACTCCAGTGCATTTCC...TGTCTCCCCACCACTCCAGTGCATTTCCGCCTGGCTCCTAGAAGCCCCATTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | AAATCTAGTACCAGACAAGGATTGAGGGAGCTTCGGTCCCGTCCCCCTGCTAAGGTCTCCGACGGGATCTaGCAGGTACATGTTGATCAG | + |
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Preference number: 4 (lower is better) Translates to: KSSTRQGLRELRSRPPAKVSDGI*QVHVDQ Trigger: CTGATCAACATGTACCTGCCAGATCCCGTCGGAGAC...CTTAGCAGGGGGACGGGACCGAAGCTCCCTCAATCCTTGTCTGGTACTAGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGCAAAAGTGGGAAAAGATTTGGCACTCGTTAAAGAGTAGTGATATTGAAGGATTAGAGGACGGTTaGCGGAGGCTCCCGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: EEQKWEKIWHSLKSSDIEGLEDG*RRLPGP Trigger: AGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCC...TTCAATATCACTACTCTTTAACGAGTGCCAAATCTTTTCCCACTTTTGCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGGCGGAAATGCACTGGAGTGGTGGGGAGACAAGAGAGGTCCACAAATCCAAGTGGGAAAAGATTTaGCACTCGTTAAAGAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SQAEMHWSGGETREVHKSKWEKI*HSLKSS Trigger: ACTACTCTTTAACGAGTGCCAAATCTTTTCCCACTT...GGATTTGTGGACCTCTCTTGTCTCCCCACCACTCCAGTGCATTTCCGCCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS CCA 90 bp | CCGTCTCCGACGGGATCTGGCAGGTACATGTTGATCAGCAGGGGCTaGGAGGCGCCGCTCTGTCTCATCGCCGCCGGGGACTGGGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: PSPTGSGRYMLISRG*EAPLCLIAAGDWAV Trigger: CACCGCCCAGTCCCCGGCGGCGATGAGACAGAGCGGCGCCTCCCAGCCCCTGCTGATCAACATGTACCTGCCAGATCCCGTCGGAGACGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CAA 90 bp | CTCCCCGGGATGCCGATGGGATCGGGCGAGACTCTAGGCGTGCGGGCGAGGCCGTCTGGCAGGTACATGTaGATCAGCAGGGGCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LPGMPMGSGETLGVRARPSGRYM*ISRGWE Trigger: CTCCCAGCCCCTGCTGATCAACATGTACCTGCCAGA...CGGCCTCGCCCGCACGCCTAGAGTCTCGCCCGATCCCATCGGCATCCCGGGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CAA 90 bp | GGGACAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAAACCGAGGCGGCCATGAGGTaGAGTTTGGAGAGGCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GTGGRGPCVTEDGGFHQTEAAMR*SLERPG Trigger: CCCCGGCCTCTCCAAACTCAACCTCATGGCCGCCTC...GGTTTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCCTCCTGTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CAA 90 bp | ATTAGAGGACGGTTGACGGAGGCTCCCGGGCCCTCCCCGGGATGCCGATGGGATGGGTTCTTCCCGTCCTaGAAGAGACCGTCTCCGACG | + |
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Preference number: 5 (lower is better) Translates to: IRGRLTEAPGPSPGCRWDGFFPS*KRPSPT Trigger: CGTCGGAGACGGTCTCTTCAAGGACGGGAAGAACCC...ATCCCATCGGCATCCCGGGGAGGGCCCGGGAGCCTCCGTCAACCGTCCTCTAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAGGAAGGGGGCCGTGTGTCACGGAGGACGGTGGCTTTCACCAAACCTGCTGGATTAGAGGACGGTaGACGGAGGCTCCCGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: TGGRGPCVTEDGGFHQTCWIRGR*TEAPGP Trigger: GGGCCCGGGAGCCTCCGTCAACCGTCCTCTAATCCA...GCAGGTTTGGTGAAAGCCACCGTCCTCCGTGACACACGGCCCCCTTCCTCCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CAA 90 bp | CGTCCCCCTGCTAAGTGCGGCAGGTGGAGTAAACTCTGGATTAGAGGACGGTTGGGGGCGAGGCAGGCTTaGCGCTCGGTGGCACCGATC | + |
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Preference number: 5 (lower is better) Translates to: RPPAKCGRWSKLWIRGRLGARQA*RSVAPI Trigger: GATCGGTGCCACCGAGCGCAAAGCCTGCCTCGCCCC...CAACCGTCCTCTAATCCAGAGTTTACTCCACCTGCCGCACTTAGCAGGGGGACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CAA 90 bp | AAGGAGGACCGTGAGAGGCCTCCACGTGCTGAGGTGGGAGCAGTTCCTTGGGGAGCCATGAGGTTGAGTTaGGAGAGGCCGGGGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: KEDRERPPRAEVGAVPWGAMRLS*ERPGKG Trigger: GCCCTTCCCCGGCCTCTCCAAACTCAACCTCATGGC...TCCCCAAGGAACTGCTCCCACCTCAGCACGTGGAGGCCTCTCACGGTCCTCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CAA 90 bp | CACCGGGAGTTTCTCCTGGGAGTGTGGGGACAGGAGGAAGGGGGCCGTGTGTCAGGTGGGAGCAGTTCCTaGGGGAAGAGCAAAAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: HREFLLGVWGQEEGGRVSGGSSS*GKSKSG Trigger: CCCACTTTTGCTCTTCCCCAAGGAACTGCTCCCACC...TGACACACGGCCCCCTTCCTCCTGTCCCCACACTCCCAGGAGAAACTCCCGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTGGTGGGGAGACAAGAGAGGTCCACAAATCCCCTCCGGGACCTGGAGACAGTACCAGACAAGGATaGAGGGAGCTTCGGTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: WSGGETREVHKSPPGPGDSTRQG*RELRSR Trigger: ACGGGACCGAAGCTCCCTCAATCCTTGTCTGGTACT...GTCTCCAGGTCCCGGAGGGGATTTGTGGACCTCTCTTGTCTCCCCACCACTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS GCA 90 bp | GCTCGGGTTCTTCCCGTCCTTGAAGAGACCGTCTCCGACGGGATCTaGAAGCAGCAGAAGAAAAGAATCAGGAGAACCCCGGGCGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: ARVLPVLEETVSDGI*KQQKKRIRRTPGGS Trigger: ACTTCCGCCCGGGGTTCTCCTGATTCTTTTCTTCTGCTGCTTGCAGATCCCGTCGGAGACGGTCTCTTCAAGGACGGGAAGAACCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470119.1 |
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| CDS CAA 72 bp | GGGCTCAGCGGCCCCCAGCTCGGGTTCTTCCCGTCCTaGAAGAGACCGTCTCCGACGGGATCTGGCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GLSGPQLGFFPS*KRPSPTGSGRY Trigger: GTACCTGCCAGATCCCGTCGGAGACGGTCTCTTCAAGGACGGGAAGAACCCGAGCTGGGGGCCGCTGAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS CAA 72 bp | GGGCTCAGCGGCCCCCAGCTCGGGTTCTTCCCGTCCTaGAAGAGACCGTCTCCGACGGGATCTGCAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GLSGPQLGFFPS*KRPSPTGSASS Trigger: GCTGCTTGCAGATCCCGTCGGAGACGGTCTCTTCAAGGACGGGAAGAACCCGAGCTGGGGGCCGCTGAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470119.1 |
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| CDS TCA 72 bp | GGCTCAGCGGCCCCCAGCTCGGGTTCTTCCCGTCCTTaGAGAGACCGTCTCCGACGGGATCTGGCAGGTACA | + |
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Preference number: 6 (lower is better) Translates to: GSAAPSSGSSRP*RDRLRRDLAGT Trigger: TGTACCTGCCAGATCCCGTCGGAGACGGTCTCTTCAAGGACGGGAAGAACCCGAGCTGGGGGCCGCTGAGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295727.2 |
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| CDS TCA 72 bp | GGCTCAGCGGCCCCCAGCTCGGGTTCTTCCCGTCCTTaGAGAGACCGTCTCCGACGGGATCTGCAAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSAAPSSGSSRP*RDRLRRDLQAA Trigger: TGCTGCTTGCAGATCCCGTCGGAGACGGTCTCTTCAAGGACGGGAAGAACCCGAGCTGGGGGCCGCTGAGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470119.1 |
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| CDS GCA 72 bp | CTTCCCGTCCTTGAAGAGACCGTCTCCGACGGGATCTaGAAGCAGCAGAAGAAAAGAATCAGGAGAACCCCG | + |
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Preference number: 6 (lower is better) Translates to: LPVLEETVSDGI*KQQKKRIRRTP Trigger: CGGGGTTCTCCTGATTCTTTTCTTCTGCTGCTTGCAGATCCCGTCGGAGACGGTCTCTTCAAGGACGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470119.1 |
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