RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FETUB (Homo sapiens)

Ensembl gene IDs: ENSG00000090512

Ensembl transcript IDs: ENST00000265029.8, ENST00000382134.7, ENST00000382136.3, ENST00000420570.1, ENST00000431018.5, ENST00000435961.5, ENST00000450521.5, ENST00000488561.1

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTaGTTCTCATGGCGGAAGGACAAGAGGGCTGGCATTCTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: LPCHAAHHTPTEDSV*FSWRKDKRAGILGW
Trigger: CCAGCCCAGAATGCCAGCCCTCTTGTCCTTCCGCCATGAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR GCA 90 bp TGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATaGGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCATG +
Preference number: 1 (lower is better)
Translates to: CTLCLCPSSPSPPMS*GAPYPYRRLCVILM
Trigger: CATGAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAGAGCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CCA 90 bp TGTATTTCGCAAGAGACTCGGTGGCAGCCTCCAGCACTTGGTGATTaGAAGAGTCAGTGGGTATGGAGCTTGGGCAGTCAGGGCACGTCA +
Preference number: 1 (lower is better)
Translates to: CISQETRWQPPALGD*KSQWVWSLGSQGTS
Trigger: TGACGTGCCCTGACTGCCCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGAAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420570.1
3UTR TCA 90 bp TTGTTGTATTTCGCAAGAGACTCGGTGGCAGCCTCCAGCACTTGGTaGTTGGAAGAGTCAGTGGGTATGGAGCTTGGGCAGTCAGGGCAC +
Preference number: 1 (lower is better)
Translates to: LLYFARDSVAASSTW*LEESVGMELGQSGH
Trigger: GTGCCCTGACTGCCCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGAAATACAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CCA 90 bp GAGACTCGGTGGCAGCCTCCAGCACTTGGTGATTGGAAGAGTCAGTaGGTATGGAGCTTGGGCAGTCAGGGCACGTCATGTAAATCTTTT +
Preference number: 1 (lower is better)
Translates to: ETRWQPPALGDWKSQ*VWSLGSQGTSCKSF
Trigger: AAAAGATTTACATGACGTGCCCTGACTGCCCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420570.1
3UTR TCA 90 bp AAGAGAGGCATCTCTCCATGGTATGAGACTGCTCAGTTTAGGAGGTaGTGCAGCTCAGGGTACAAGGCAGTGTACAGGGTAGAGTGCAGC +
Preference number: 1 (lower is better)
Translates to: KRGISPWYETAQFRR*CSSGYKAVYRVECS
Trigger: GCTGCACTCTACCCTGTACACTGCCTTGTACCCTGAGCTGCATCACCTCCTAAACTGAGCAGTCTCATACCATGGAGAGATGCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
3UTR CCA 90 bp ACTGCTTGGATGTGTTCTCATTGTTGTATTTCGCAAGAGACTCGGTaGCAGCCTCCAGCACTTGGTGATTGGAAGAGTCAGTGGGTATGG +
Preference number: 1 (lower is better)
Translates to: TAWMCSHCCISQETR*QPPALGDWKSQWVW
Trigger: CCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR TCA 90 bp AAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCTaGGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTA +
Preference number: 1 (lower is better)
Translates to: KPRAQSHYFQSQSTC*DQEESKRRPSLATL
Trigger: TAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
3UTR GCA 90 bp ACCACCCACTGGCTAGAAGCCCTGGTGACTTTGAAGAGAGAATACTaGTTGGATGTGTTCTCATTGTTGTATTTCGCAAGAGACTCGGTG +
Preference number: 1 (lower is better)
Translates to: TTHWLEALVTLKREY*LDVFSLLYFARDSV
Trigger: CACCGAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTCAAAGTCACCAGGGCTTCTAGCCAGTGGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CCA 90 bp TTTTTCTGCTGGGATTCTTCCACCTTGGGAAGGTTTGTAGGTTTCTaGTTAACAGCAGAGTTTTCACTTCCAGTGGCTGGAGCCTGTGAT +
Preference number: 1 (lower is better)
Translates to: FFCWDSSTLGRFVGF*LTAEFSLPVAGACD
Trigger: ATCACAGGCTCCAGCCACTGGAAGTGAAAACTCTGCTGTTAACCAGAAACCTACAAACCTTCCCAAGGTGGAAGAATCCCAGCAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR GCA 90 bp GGAATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTaGTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAA +
Preference number: 1 (lower is better)
Translates to: GIKGNLGTETVLGIS*SRLPVLGKVSLLMQ
Trigger: TTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR CCA 90 bp TCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACACTCTTGGCCCAGCTTTaGAGGGGGAGTCTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: SVHRPHRLPCHAAHHTPTLLAQL*RGSLLG
Trigger: CCCCAACAGACTCCCCCTCCAAAGCTGGGCCAAGAG...TGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp CCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCGGGCCGACCACCCACTaGCTAGAAGCCCTGGTGACT +
Preference number: 2 (lower is better)
Translates to: PPMSCGAPYPYRRLCVILGPTTH*LEALVT
Trigger: AGTCACCAGGGCTTCTAGCCAGTGGGTGGTCGGCCC...GAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp CTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCGGGGTGTTTTTCTGCTaGGATTCTTCCACCTTGGGA +
Preference number: 2 (lower is better)
Translates to: LSLSIVPIASHVMRRTIPGVFFC*DSSTLG
Trigger: TCCCAAGGTGGAAGAATCCCAGCAGAAAAACACCCC...GGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp TCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACACCAGCACTTGGTGATTaGAAGAGTCAGTGGGTATGG +
Preference number: 2 (lower is better)
Translates to: SVHRPHRLPCHAAHHTPTPALGD*KSQWVW
Trigger: CCATACCCACTGACTCTTCCAATCACCAAGTGCTGG...TGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR GCA 90 bp CCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTTCGCCTCCCATGTCATaGGGCGCACCATACCCCTAC +
Preference number: 2 (lower is better)
Translates to: PRRVKKASFTSHSTCARSSPPMS*GAPYPY
Trigger: GTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA...AGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp CCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGGATTGGAAGAGTCAGTaGGTATGGAGCTTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: PSPPMSCGAPYPYRRLCVDWKSQ*VWSLGS
Trigger: ACTGCCCAAGCTCCATACCCACTGACTCTTCCAATC...CACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR TCA 90 bp CAGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGTCGGAGGACTGAAGTaGACAGCTGCTGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: QERPPEGPFPGNFYHPSQVGGLK*TAAGLG
Trigger: TCCCAGGCCAGCAGCTGTTCACTTCAGTCCTCCGAC...CTGACTTGGATGATAAAAATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp AGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTTCCAGGGTTTCTCCCTaGGGATTCGTGGTTAGGTCC +
Preference number: 2 (lower is better)
Translates to: RVECSPSRGLSLIISNPSSRVSP*GFVVRS
Trigger: GGACCTAACCACGAATCCCCAGGGAGAAACCCTGGA...ACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CAA 90 bp CTCATTGTTGTATTTCGCAAGAGACTCGGTGGCAGCCTCCAGCACTaGGTGATTGGAAGAGTCAGTGGGTATGGAGCTTGGGCAGTCAGG +
Preference number: 2 (lower is better)
Translates to: LIVVFRKRLGGSLQH*VIGRVSGYGAWAVR
Trigger: CCTGACTGCCCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGAAATACAACAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp GAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGGGACTGAAACTGTGCTaGGCATTAGTTGCTCACGCC +
Preference number: 2 (lower is better)
Translates to: ESKRRPSLATLRVHALSLGLKLC*ALVAHA
Trigger: GGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCC...CAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR TCA 90 bp CAAGGCAGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATAGACTTCCAGACAGATaGAAAGAGGTAGAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: QGSVQGRVQPKPRAQSHYRLPDR*KEVEGW
Trigger: CCAACCCTCTACCTCTTTTCATCTGTCTGGAAGTCT...ATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR GCA 90 bp GGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAATTTCGCCTCCCATGTCATaGGGCGCACCATACCCCTAC +
Preference number: 2 (lower is better)
Translates to: GNGMGPTQLIPVLELKGISPPMS*GAPYPY
Trigger: GTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA...AATTCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR GCA 90 bp CCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCGAGTCAGAGAACCTTTaGAAAGACCAACAGGCACAG +
Preference number: 2 (lower is better)
Translates to: PPMSCGAPYPYRRLCVILESENL*KDQQAQ
Trigger: CTGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTC...GAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp CAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGAAAGAGGTAGAGGGTTaGAAATGGTATGGGCCCTAC +
Preference number: 2 (lower is better)
Translates to: QGRVQPKPRAQSHYFQSQKEVEG*KWYGPY
Trigger: GTAGGGCCCATACCATTTCCAACCCTCTACCTCTTT...CTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR TCA 90 bp GGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCCCGGTGTCCCAGTCAACATGCTaGGACCAAGAAGAGTCAAAA +
Preference number: 2 (lower is better)
Translates to: GNLGTETVLGISCSRLPVSQSTC*DQEESK
Trigger: TTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGA...CACCGGGAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR TCA 90 bp ATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCACAGAGTCGGAGGACTaGAGTGAACAGCTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: IKGNLGTETVLGISCSRLTESED*SEQLLA
Trigger: GGCCAGCAGCTGTTCACTTCAGTCCTCCGACTCTGT...GAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435961.5
3UTR-3UTR CCA 90 bp TGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCATGGCGGAAGGAAGAGGCATCTCTCCATaGTATGAGACTGCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: CGAPYPYRRLCVILMAEGRGISP*YETAQF
Trigger: AAACTGAGCAGTCTCATACCATGGAGAGATGCCTCT...TCCTTCCGCCATGAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp ATTAGTTGCTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAATGCTCGCAAGAGACTCGGTaGCAGCCTCCAGCACTTGGT +
Preference number: 2 (lower is better)
Translates to: ISCSRLPVLGKVSLLMQCSQETR*QPPALG
Trigger: ACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGA...GCATTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCAACTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435961.5
3UTR-3UTR CCA 90 bp AGGAAGGAAATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCGGGGTGTTTTTCTGCTaGGATTCTTCCACCTTGGGA +
Preference number: 2 (lower is better)
Translates to: RKEISRVSPWGFVVRSRCGVFFC*DSSTLG
Trigger: TCCCAAGGTGGAAGAATCCCAGCAGAAAAACACCCC...GCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATATTTCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp CCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCAAGTCAGGAAGATATTaGACAGATCCTCTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: PPMSCGAPYPYRRLCVILKSGRY*TDPLGP
Trigger: TGGGCCAAGAGGATCTGTCCAATATCTTCCTGACTT...GAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CAA 90 bp GCCCTGGTGACTTTGAAGAGAGAATACTGCTTGGATGTGTTCTCATaGTTGTATTTCGCAAGAGACTCGGTGGCAGCCTCCAGCACTTGG +
Preference number: 2 (lower is better)
Translates to: ALVTLKREYCLDVFS*LYFARDSVAASSTW
Trigger: CCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTCAAAGTCACCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR TCA 90 bp TTCTTCCACCTTGGGAAGGTTTGTAGGTTTCTGGTTAACAGCAGAGTTTTCACTGTCGGAGGACTGAAGTaGACAGCTGCTGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: FFHLGKVCRFLVNSRVFTVGGLK*TAAGLG
Trigger: TCCCAGGCCAGCAGCTGTTCACTTCAGTCCTCCGAC...AGTGAAAACTCTGCTGTTAACCAGAAACCTACAAACCTTCCCAAGGTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR GCA 90 bp GGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAATTCTGGGCACTCAGCAGTaGGTGCTTTTTCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GNGMGPTQLIPVLELKGILGTQQ*VLFLWG
Trigger: TCCCCAAAGAAAAAGCACGCACTGCTGAGTGCCCAG...AATTCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435961.5
3UTR-3UTR CCA 90 bp GAGGGCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGAAGATATTGGACAGAAGAGTCAGTGGGTATaGAGCTTGGGCAGTCAGGGC +
Preference number: 2 (lower is better)
Translates to: EGPFPGNFYHPSQEDIGQKSQWV*SLGSQG
Trigger: GCCCTGACTGCCCAAGCTCCATACCCACTGACTCTT...CTGTCCAATATCTTCCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR TCA 90 bp ATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCACAGAAGACTCTGTGTaGTTCTCATGGCGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: IKGNLGTETVLGISCSRLTEDSV*FSWRKD
Trigger: GTCCTTCCGCCATGAGAATCACACAGAGTCTTCTGT...GAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435961.5
3UTR-3UTR GCA 90 bp GTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTGAGTCAGAGAACCTTTaGAAAGACCAACAGGCACAG +
Preference number: 2 (lower is better)
Translates to: VNMLRPRRVKKASFTSHSESENL*KDQQAQ
Trigger: CTGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTC...AGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp CAGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGAGAGGCATCTCTCCATaGTATGAGACTGCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: QERPPEGPFPGNFYHPSQRGISP*YETAQF
Trigger: AAACTGAGCAGTCTCATACCATGGAGAGATGCCTCT...CTGACTTGGATGATAAAAATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp GGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCCCGGTGTTAGGGAAAAGAGAGAATACTGCTTaGATGTGTTCTCATTGTTGT +
Preference number: 2 (lower is better)
Translates to: GTETVLGISCSRLPVLGKRENTA*MCSHCC
Trigger: ACAACAATGAGAACACATCCAAGCAGTATTCTCTCT...TTTCCCTAACACCGGGAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435961.5
3UTR-3UTR GCA 90 bp TTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCCTCATTCCACAGTCTTaGCATGCCTTCTTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: FPIPVNMLRPRRVKKASFLIPQS*HAFFLS
Trigger: GCTCAGAAAGAAGGCATGGCAAGACTGTGGAATGAG...GAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420570.1
3UTR-3UTR CCA 90 bp TTCTTCCACCTTGGGAAGGTTTGTAGGTTTCTGGTTAACAGCAGAGTTTTCACTCCAGCACTTGGTGATTaGAAGAGTCAGTGGGTATGG +
Preference number: 2 (lower is better)
Translates to: FFHLGKVCRFLVNSRVFTPALGD*KSQWVW
Trigger: CCATACCCACTGACTCTTCCAATCACCAAGTGCTGG...AGTGAAAACTCTGCTGTTAACCAGAAACCTACAAACCTTCCCAAGGTGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR TCA 90 bp GAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCAGTGTGTCCCAGTCAACATGCTaGGACCAAGAAGAGTCAAAA +
Preference number: 2 (lower is better)
Translates to: EPVIQRSHKSQRQTFPSVSQSTC*DQEESK
Trigger: TTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGA...CACACTGGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR GCA 90 bp ACTTCCAGACAGATGAAAAGAGGTAGAGGGTTGGAAATGGTATGGGCCCTACGCTCTTTACTCATGCAATaGTTTCATGCTGAGATTTCA +
Preference number: 2 (lower is better)
Translates to: TSRQMKRGRGLEMVWALRSLLMQ*FHAEIS
Trigger: TGAAATCTCAGCATGAAAGCATTGCATGAGTAAAGA...GCGTAGGGCCCATACCATTTCCAACCCTCTACCTCTTTTCATCTGTCTGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR GCA 90 bp AGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGTCTTTACTCATGCAATaGTTTCATGCTGAGATTTCA +
Preference number: 2 (lower is better)
Translates to: RVGNGMGPTQLIPVLELKSLLMQ*FHAEIS
Trigger: TGAAATCTCAGCATGAAAGCATTGCATGAGTAAAGA...CTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR GCA 90 bp ATTAGTTGCTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAATGCTTGAAGAGAGAATACTaGTTGGATGTGTTCTCATTG +
Preference number: 2 (lower is better)
Translates to: ISCSRLPVLGKVSLLMQCLKREY*LDVFSL
Trigger: CAATGAGAACACATCCAAGCAGTATTCTCTCTTCAA...GCATTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCAACTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435961.5
3UTR-3UTR GCA 90 bp GGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAATTAAGTATCTTTACTCATaGAATGCTTTCATGCTGAGA +
Preference number: 2 (lower is better)
Translates to: GNGMGPTQLIPVLELKGIKYLYS*NAFMLR
Trigger: TCTCAGCATGAAAGCATTGCATGAGTAAAGATACTT...AATTCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR-3UTR CCA 90 bp GCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGAAGATATTGGACAGATCCAGAGAGAATACTGCTTaGATGTGTTCTCATTGTTGT +
Preference number: 2 (lower is better)
Translates to: ALFLGIFIIQVRKILDRSRENTA*MCSHCC
Trigger: ACAACAATGAGAACACATCCAAGCAGTATTCTCTCT...GGATCTGTCCAATATCTTCCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CCA 90 bp TCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAGGTTTGTAGGTTTCTaGTTAACAGCAGAGTTTTCA +
Preference number: 2 (lower is better)
Translates to: SVSLFPIPVNMLRPRRVKRFVGF*LTAEFS
Trigger: TGAAAACTCTGCTGTTAACCAGAAACCTACAAACCT...TTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CAA 90 bp CTGGGCGAAGAGTACAGTTATAAGCAGCTAAATAGAGAACTCTACTaGGGTTGTTCATATAAAATATTGCTTTGCATTGACCATAAACTG +
Preference number: 2 (lower is better)
Translates to: LGEEYSYKQLNRELY*GCSYKILLCIDHKL
Trigger: CAGTTTATGGTCAATGCAAAGCAATATTTTATATGAACAACCCAAGTAGAGTTCTCTATTTAGCTGCTTATAACTGTACTCTTCGCCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420570.1
3UTR TCA 72 bp TTCGCAAGAGACTCGGTGGCAGCCTCCAGCACTTGGTaGTTGGAAGAGTCAGTGGGTATGGAGCTTGGGCAG +
Preference number: 3 (lower is better)
Translates to: FARDSVAASSTW*LEESVGMELGQ
Trigger: CTGCCCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CCA 72 bp TGGCAGCCTCCAGCACTTGGTGATTGGAAGAGTCAGTaGGTATGGAGCTTGGGCAGTCAGGGCACGTCATGT +
Preference number: 3 (lower is better)
Translates to: WQPPALGDWKSQ*VWSLGSQGTSC
Trigger: ACATGACGTGCCCTGACTGCCCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420570.1
3UTR CCA 72 bp CAAGAGACTCGGTGGCAGCCTCCAGCACTTGGTGATTaGAAGAGTCAGTGGGTATGGAGCTTGGGCAGTCAG +
Preference number: 3 (lower is better)
Translates to: QETRWQPPALGD*KSQWVWSLGSQ
Trigger: CTGACTGCCCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CAA 90 bp AGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGCCTCTTGGCCCAGCTTaGGAGGGGGAGTCTGTTGGG +
Preference number: 3 (lower is better)
Translates to: RKGLLRALFLGIFIIQVRPLGPA*EGESVG
Trigger: CCCAACAGACTCCCCCTCCAAAGCTGGGCCAAGAGG...CCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR TCA 72 bp CATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTaGTTCTCATGGCGGAAGGACAAGAGGGCTGGCATT +
Preference number: 3 (lower is better)
Translates to: HAAHHTPTEDSV*FSWRKDKRAGI
Trigger: AATGCCAGCCCTCTTGTCCTTCCGCCATGAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CAA 90 bp AGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTGTGCGTGCTTTTTCTTaGGGGAAAGGCAGGACCACC +
Preference number: 3 (lower is better)
Translates to: RVECSPSRGLSLIISNPSVRAFS*GKGRTT
Trigger: GGTGGTCCTGCCTTTCCCCAAAGAAAAAGCACGCAC...ACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CCA 72 bp GGAAGGAAATATCCAGGGTTTCTCCCTGGGGATTCGTaGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: GRKYPGFLPGDS*LGPDAQERPPE
Trigger: CTCAGGAGGCCTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATATTTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CCA 72 bp CCTCCAGCACTTGGTGATTGGAAGAGTCAGTGGGTATaGAGCTTGGGCAGTCAGGGCACGTCATGTAAATCT +
Preference number: 3 (lower is better)
Translates to: PPALGDWKSQWV*SLGSQGTSCKS
Trigger: AGATTTACATGACGTGCCCTGACTGCCCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420570.1
3UTR-3UTR CAA 90 bp CAAGGCAGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATGAAGCCCTGGTGACTTaGAAGAGAGAATACTGCTTG +
Preference number: 3 (lower is better)
Translates to: QGSVQGRVQPKPRAQSHYEALVT*KREYCL
Trigger: CAAGCAGTATTCTCTCTTCAAAGTCACCAGGGCTTC...ATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CAA 90 bp ATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGCGAGTCAGAGAACCTTaGCAAAGACCAACAGGCACA +
Preference number: 3 (lower is better)
Translates to: ISRVSPWGFVVRSRCTGKRVREP*QRPTGT
Trigger: TGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTCG...CTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR TCA 72 bp CCTTTGCAAAGACCAACAGGCACAGAGTCGGAGGACTaGAGTGAACAGCTGCTGGCCTGGGATTTAGTACAT +
Preference number: 3 (lower is better)
Translates to: PLQRPTGTESED*SEQLLAWDLVH
Trigger: ATGTACTAAATCCCAGGCCAGCAGCTGTTCACTTCAGTCCTCCGACTCTGTGCCTGTTGGTCTTTGCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CAA 90 bp GGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCCCGGTGGATGTGTTCTCATTGTaGTATTTCGCAAGAGACTCG +
Preference number: 3 (lower is better)
Translates to: GNLGTETVLGISCSRLPVDVFSL*YFARDS
Trigger: CGAGTCTCTTGCGAAATACAACAATGAGAACACATC...CACCGGGAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435961.5
3UTR GCA 72 bp GGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTaGTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTA +
Preference number: 3 (lower is better)
Translates to: GNLGTETVLGIS*SRLPVLGKVSL
Trigger: TAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR GCA 72 bp CAAACTTTTCCCAGTGTGTTCGAGTCAGAGAACCTTTaGAAAGACCAACAGGCACAGAGTCGGAGGACTGAA +
Preference number: 3 (lower is better)
Translates to: QTFPSVFESENL*KDQQAQSRRTE
Trigger: TTCAGTCCTCCGACTCTGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTCGAACACACTGGGAAAAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CAA 90 bp GCTGGAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCAGGAAGCCCTGGTGACTTaGAAGAGAGAATACTGCTTG +
Preference number: 3 (lower is better)
Translates to: AGACDSKKSQVTETNFSQEALVT*KREYCL
Trigger: CAAGCAGTATTCTCTCTTCAAAGTCACCAGGGCTTC...CTGGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR-3UTR CAA 90 bp TCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAACCTCATTCCACAGTCTaGCCATGCCTTCTTTCTGAG +
Preference number: 3 (lower is better)
Translates to: SVSLFPIPVNMLRPRRVKPHSTV*PCLLSE
Trigger: CTCAGAAAGAAGGCATGGCAAGACTGTGGAATGAGG...TTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420570.1
3UTR-3UTR CAA 90 bp AGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGTTGGATGTGTTCTCATaGTTGTATTTCGCAAGAGAC +
Preference number: 3 (lower is better)
Translates to: RVGNGMGPTQLIPVLELKLDVFS*LYFARD
Trigger: GTCTCTTGCGAAATACAACAATGAGAACACATCCAA...CTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435961.5
3UTR GCA 72 bp TGGCTAGAAGCCCTGGTGACTTTGAAGAGAGAATACTaGTTGGATGTGTTCTCATTGTTGTATTTCGCAAGA +
Preference number: 3 (lower is better)
Translates to: WLEALVTLKREY*LDVFSLLYFAR
Trigger: TCTTGCGAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTCAAAGTCACCAGGGCTTCTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGGGTTGAGGGCCAGCTaGGGTGGAGACATTGCTCCG +
Preference number: 4 (lower is better)
Translates to: VCTLCLCPSSPSPPMSCGGLRAS*GGDIAP
Trigger: CGGAGCAATGTCTCCACCCCAGCTGGCCCTCAACCC...GCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAGAGCGTGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCAGAGGGCTGGCATTCTaGGCTGGCCCTGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: SLATLRVHALSLSIVPIARGLAF*AGPGHS
Trigger: TGAGTGCCCAGGGCCAGCCCAGAATGCCAGCCCTCT...GGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTAGGATGGGTCAGTTTGTaGAGCTGCAGGGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLSIVPIASHVMRRTIPLGWVSL*SCRDWL
Trigger: CAGCCAGTCCCTGCAGCTCCACAAACTGACCCATCC...TAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp CTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCGAACAAGGCCCAGGATaGGTCAGTTTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLSIVPIASHVMRRTIPEQGPG*VSLWSC
Trigger: GCAGCTCCACAAACTGACCCATCCTGGGCCTTGTTC...GGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp ACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCAAGTGGGTATGGAGCTTaGGCAGTCAGGGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: TLCLCPSSPSPPMSCGAPSGYGA*AVRARH
Trigger: ATGACGTGCCCTGACTGCCCAAGCTCCATACCCACT...TGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTATCGCAAGAGACTCGGTaGCAGCCTCCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: SLSIVPIASHVMRRTIPLSQETR*QPPALG
Trigger: ACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGA...TAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp ACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCACTGGGCACTCAGCAGTaGGTGCTTTTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLCLCPSSPSPPMSCGAPLGTQQ*VLFLWG
Trigger: TCCCCAAAGAAAAAGCACGCACTGCTGAGTGCCCAG...TGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAGAGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp GAGACTCGGTGGCAGCCTCCAGCACTTGGTGATTGGAAGAGTCAGTGGGTATGGTCGCCTCCCATGTCATaGGGCGCACCATACCCCTAC +
Preference number: 4 (lower is better)
Translates to: ETRWQPPALGDWKSQWVWSPPMS*GAPYPY
Trigger: GTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA...CCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATGGGTTGAGGGCCAGCTaGGGTGGAGACATTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SFTSHSTCARSVSVHRPHGLRAS*GGDIAP
Trigger: CGGAGCAATGTCTCCACCCCAGCTGGCCCTCAACCC...ATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGATCCAGGGTTTCTCCCTaGGGATTCGTGGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSSPSPPMSCGAPYPYRRSRVSP*GFVVRS
Trigger: GGACCTAACCACGAATCCCCAGGGAGAAACCCTGGA...TCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCATGGCGGAAGGAAGAGGGCTGGCATTCTaGGCTGGCCCTGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: CGAPYPYRRLCVILMAEGRGLAF*AGPGHS
Trigger: TGAGTGCCCAGGGCCAGCCCAGAATGCCAGCCCTCT...TCCTTCCGCCATGAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp TCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGCCATGCCTTCTTTCTaGGCACATGGCAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: SVHRPHRLPCHAAHHTPTAMPSF*AHGSQS
Trigger: AGACTGACTGCCATGTGCTCAGAAAGAAGGCATGGC...TGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp CCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGGCCTCCAGCACTTGGTaGTTGGAAGAGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSPPMSCGAPYPYRRLCVASSTW*LEESVG
Trigger: ACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGC...CACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp CTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCACAGAAGACTCTGTGTaGTTCTCATGGCGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LSLSIVPIASHVMRRTIPTEDSV*FSWRKD
Trigger: GTCCTTCCGCCATGAGAATCACACAGAGTCTTCTGT...GGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp CCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTGGGCACTCAGCAGTaGGTGCTTTTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSSPSPPMSCGAPYPYRRLGTQQ*VLFLWG
Trigger: TCCCCAAAGAAAAAGCACGCACTGCTGAGTGCCCAG...TCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGAGCTCTTGGCCCAGCTTTaGAGGGGGAGTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FLPGDSWLGPDAQERPPELLAQL*RGSLLG
Trigger: CCCCAACAGACTCCCCCTCCAAAGCTGGGCCAAGAG...CTCAGGAGGCCTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGTCCAGGGTTTCTCCCTaGGGATTCGTGGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSPPMSCGAPYPYRRLCVSRVSP*GFVVRS
Trigger: GGACCTAACCACGAATCCCCAGGGAGAAACCCTGGA...CACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp GGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGCCTCCAGCACTTGGTaGTTGGAAGAGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: GFLPGDSWLGPDAQERPPASSTW*LEESVG
Trigger: ACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGC...AGGAGGCCTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp CAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGACAGAGTCGGAGGACTaGAGTGAACAGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QGRVQPKPRAQSHYFQSQTESED*SEQLLA
Trigger: GGCCAGCAGCTGTTCACTTCAGTCCTCCGACTCTGT...CTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp TTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGAGACAGGAAAGGCCTCCTaGGGGCCCTTTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FLPGDSWLGPDAQERPPETGKAS*GPFSWE
Trigger: TTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCTGT...CTCAGGAGGCCTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTGGGTTGAGGGCCAGCTaGGGTGGAGACATTGCTCCG +
Preference number: 4 (lower is better)
Translates to: EESKRRPSLATLRVHALSGLRAS*GGDIAP
Trigger: CGGAGCAATGTCTCCACCCCAGCTGGCCCTCAACCC...AGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCAAGAGTCAGTGGGTATaGAGCTTGGGCAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLATLRVHALSLSIVPIKSQWV*SLGSQG
Trigger: GCCCTGACTGCCCAAGCTCCATACCCACTGACTCTT...GATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCATGGCGGAAGGATCGCAAGAGACTCGGTaGCAGCCTCCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: CGAPYPYRRLCVILMAEGSQETR*QPPALG
Trigger: ACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGA...TCCTTCCGCCATGAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTGGGCCGACCACCCACTaGCTAGAAGCCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: EESKRRPSLATLRVHALSGPTTH*LEALVT
Trigger: AGTCACCAGGGCTTCTAGCCAGTGGGTGGTCGGCCC...AGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGAGAGGGCTGGCATTCTaGGCTGGCCCTGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: QEESKRRPSLATLRVHALRGLAF*AGPGHS
Trigger: TGAGTGCCCAGGGCCAGCCCAGAATGCCAGCCCTCT...CAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCGAAGGACAAGAGGGCTaGCATTCTGGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VQPKPRAQSHYFQSQSTCEGQEG*HSGLAL
Trigger: CAGGGCCAGCCCAGAATGCCAGCCCTCTTGTCCTTC...GCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp ACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCGGACTGAAACTGTGCTaGGCATTAGTTGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: TSHSTCARSVSVHRPHRLGLKLC*ALVAHA
Trigger: GGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCC...GAGGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR TCA 90 bp GAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTGTCGGAGGACTGAAGTaGACAGCTGCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EESKRRPSLATLRVHALSVGGLK*TAAGLG
Trigger: TCCCAGGCCAGCAGCTGTTCACTTCAGTCCTCCGAC...AGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp GAGGTAGAGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAACAGGAAAGGCCTCCTaGGGGCCCTTTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: EVEGWKWYGPYAANTCPGTGKAS*GPFSWE
Trigger: TTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCTGT...TCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCTCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR GCA 90 bp ATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGTCGCCTCCCATGTCATaGGGCGCACCATACCCCTAC +
Preference number: 4 (lower is better)
Translates to: ISRVSPWGFVVRSRCTGKSPPMS*GAPYPY
Trigger: GTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA...CTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp CAAGGCAGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATGTGCTGGGCATTAGTTaGTCACGCCTCCCGGTGTTA +
Preference number: 4 (lower is better)
Translates to: QGSVQGRVQPKPRAQSHYVLGIS*SRLPVL
Trigger: TAACACCGGGAGGCGTGAGCAACTAATGCCCAGCAC...ATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp AGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTGGATGGGTCAGTTTGTaGAGCTGCAGGGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RVECSPSRGLSLIISNPSGWVSL*SCRDWL
Trigger: CAGCCAGTCCCTGCAGCTCCACAAACTGACCCATCC...ACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp CTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCTTCTTTCTGAGCACATaGCAGTCAGTCTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: LSLSIVPIASHVMRRTIPFFLST*QSVSST
Trigger: TGTGCTAGAGACTGACTGCCATGTGCTCAGAAAGAA...GGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTAGTGGGTATGGAGCTTaGGCAGTCAGGGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: SPPMSCGAPYPYRRLCVISGYGA*AVRARH
Trigger: ATGACGTGCCCTGACTGCCCAAGCTCCATACCCACT...AATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATAGTGGGTATGGAGCTTaGGCAGTCAGGGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: SFTSHSTCARSVSVHRPHSGYGA*AVRARH
Trigger: ATGACGTGCCCTGACTGCCCAAGCTCCATACCCACT...ATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCCCTGGGGATTCGTaGTTAGGTCCAGATGCACAG +
Preference number: 4 (lower is better)
Translates to: SPPMSCGAPYPYRRLCVILPGDS*LGPDAQ
Trigger: CTGTGCATCTGGACCTAACCACGAATCCCCAGGGAG...AATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTAGAGGCATCTCTCCATaGTATGAGACTGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VSVHRPHRLPCHAAHHTPRGISP*YETAQF
Trigger: AAACTGAGCAGTCTCATACCATGGAGAGATGCCTCT...AGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp AGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGGTCGGAGGACTGAAGTaGACAGCTGCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RKGLLRALFLGIFIIQVRVGGLK*TAAGLG
Trigger: TCCCAGGCCAGCAGCTGTTCACTTCAGTCCTCCGAC...CCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp CAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGACAGAGTCGGAGGACTaGAGTGAACAGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QEESKRRPSLATLRVHALTESED*SEQLLA
Trigger: GGCCAGCAGCTGTTCACTTCAGTCCTCCGACTCTGT...CAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp AGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAAACAGGAAAGGCCTCCTaGGGGCCCTTTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SVQGRVQPKPRAQSHYFQTGKAS*GPFSWE
Trigger: TTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCTGT...TTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp TCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCGAGTCAGAGAACCTTTaGAAAGACCAACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SLATLRVHALSLSIVPIAESENL*KDQQAQ
Trigger: CTGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTC...GGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp ACTTCCAGACAGATGAAAAGAGGTAGAGGGTTGGAAATGGTATGGGCCCTACGCTCGCCTCCCATGTCATaGGGCGCACCATACCCCTAC +
Preference number: 4 (lower is better)
Translates to: TSRQMKRGRGLEMVWALRSPPMS*GAPYPY
Trigger: GTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA...GCGTAGGGCCCATACCATTTCCAACCCTCTACCTCTTTTCATCTGTCTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp CCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGGAACAGCTGCTGGCCTaGGATTTAGTACATGGTGAT +
Preference number: 4 (lower is better)
Translates to: PSPPMSCGAPYPYRRLCVEQLLA*DLVHGD
Trigger: ATCACCATGTACTAAATCCCAGGCCAGCAGCTGTTC...CACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGGGGTGTTTTTCTGCTaGGATTCTTCCACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GFLPGDSWLGPDAQERPPGVFFC*DSSTLG
Trigger: TCCCAAGGTGGAAGAATCCCAGCAGAAAAACACCCC...AGGAGGCCTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GAGACTCGGTGGCAGCCTCCAGCACTTGGTGATTGGAAGAGTCAGTGGGTATGGTGCGTGCTTTTTCTTTaGGGAAAGGCAGGACCACCA +
Preference number: 4 (lower is better)
Translates to: ETRWQPPALGDWKSQWVWCVLFL*GKAGPP
Trigger: TGGTGGTCCTGCCTTTCCCCAAAGAAAAAGCACGCA...CCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
3UTR CAA 72 bp GTATTTCGCAAGAGACTCGGTGGCAGCCTCCAGCACTaGGTGATTGGAAGAGTCAGTGGGTATGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VFRKRLGGSLQH*VIGRVSGYGAW
Trigger: CCAAGCTCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp AATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCCCGGTGTTAAACTGCCAGCACATCTaGGTCATTGCAGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: NLGTETVLGISCSRLPVLNCQHI*VIAAPG
Trigger: TCCCGGGGCTGCAATGACTCAGATGTGCTGGCAGTT...TAACACCGGGAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR TCA 90 bp CTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCAAACTGCCAGCACATCTaGGTCATTGCAGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LRPRRVKKASFTSHSTCANCQHI*VIAAPG
Trigger: TCCCGGGGCTGCAATGACTCAGATGTGCTGGCAGTT...TGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp ACTTCCAGACAGATGAAAAGAGGTAGAGGGTTGGAAATGGTATGGGCCCTACGCAACTGCCAGCACATCTaGGTCATTGCAGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TSRQMKRGRGLEMVWALRNCQHI*VIAAPG
Trigger: TCCCGGGGCTGCAATGACTCAGATGTGCTGGCAGTT...GCGTAGGGCCCATACCATTTCCAACCCTCTACCTCTTTTCATCTGTCTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR GCA 90 bp CCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTAGCACAGGACTAGGATaGAGAGTGCCAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PRRVKKASFTSHSTCARSSTGLG*RVPGEG
Trigger: TCCTTCCCCTGGCACTCTGCATCCTAGTCCTGTGCT...AGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp GAGACTCGGTGGCAGCCTCCAGCACTTGGTGATTGGAAGAGTCAGTGGGTATGGGAGTCAGAGAACCTTTaGAAAGACCAACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: ETRWQPPALGDWKSQWVWESENL*KDQQAQ
Trigger: CTGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTC...CCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp CAAGGCAGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATGCACTCAGCAGTGCGTaGTTTTTCTTTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QGSVQGRVQPKPRAQSHYALSSA*FFFGER
Trigger: CCTTTCCCCAAAGAAAAAGCACGCACTGCTGAGTGC...ATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACTGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCCAGCACTTGGTGATTaGAAGAGTCAGTGGGTATGG +
Preference number: 4 (lower is better)
Translates to: SFTSHSTCARSVSVHRPHPALGD*KSQWVW
Trigger: CCATACCCACTGACTCTTCCAATCACCAAGTGCTGG...ATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAATTGGGCCGACCACCCACTaGCTAGAAGCCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: GNGMGPTQLIPVLELKGIGPTTH*LEALVT
Trigger: AGTCACCAGGGCTTCTAGCCAGTGGGTGGTCGGCCC...AATTCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp TCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCAGTTTTCACTTCCAGTaGCTGGAGCCTGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: SLATLRVHALSLSIVPIASFHFQ*LEPVIQ
Trigger: TTGAATCACAGGCTCCAGCCACTGGAAGTGAAAACT...GGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGGAAGGACAAGAGGGCTaGCATTCTGGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGLSLIISNPSQHAETKKEGQEG*HSGLAL
Trigger: CAGGGCCAGCCCAGAATGCCAGCCCTCTTGTCCTTC...CTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp GAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCGTCGTTCACTCGGTTaGGTCTCAGCACATAGCCAT +
Preference number: 4 (lower is better)
Translates to: EESKRRPSLATLRVHALSRRSLG*VSAHSH
Trigger: ATGGCTATGTGCTGAGACTCAACCGAGTGAACGACG...AGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp ATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCGTCGGAGGACTGAAGTaGACAGCTGCTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IKGNLGTETVLGISCSRLVGGLK*TAAGLG
Trigger: TCCCAGGCCAGCAGCTGTTCACTTCAGTCCTCCGAC...GAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR TCA 90 bp GCAGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAGACTTCCAGACAGATaGAAAGAGGTAGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: AVYRVECSPSRGLSLIISRLPDR*KEVEGW
Trigger: CCAACCCTCTACCTCTTTTCATCTGTCTGGAAGTCT...GGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp AAGGAAATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGAACAAGGCCCAGGATaGGTCAGTTTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KEISRVSPWGFVVRSRCTEQGPG*VSLWSC
Trigger: GCAGCTCCACAAACTGACCCATCCTGGGCCTTGTTC...TGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp ATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGAGCAGACCCATTCTGTaGAGAACAAGGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ISRVSPWGFVVRSRCTGKSRPIL*RTRPRM
Trigger: CATCCTGGGCCTTGTTCTCCACAGAATGGGTCTGCT...CTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTCCCCGTCTGTATTCCTaGGCGTCGTTCACTCGGTTG +
Preference number: 4 (lower is better)
Translates to: VNMLRPRRVKKASFTSHSPRLYS*ASFTRL
Trigger: CAACCGAGTGAACGACGCCCAGGAATACAGACGGGG...AGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp AAGGAAATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAAAGAGTCAGTGGGTATaGAGCTTGGGCAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KEISRVSPWGFVVRSRCTKSQWV*SLGSQG
Trigger: GCCCTGACTGCCCAAGCTCCATACCCACTGACTCTT...TGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCAGTGTGGGGCCGACCACCCACTaGCTAGAAGCCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: EPVIQRSHKSQRQTFPSVGPTTH*LEALVT
Trigger: AGTCACCAGGGCTTCTAGCCAGTGGGTGGTCGGCCC...CACACTGGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAATTCTCTTGGCCCAGCTTTaGAGGGGGAGTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GNGMGPTQLIPVLELKGILLAQL*RGSLLG
Trigger: CCCCAACAGACTCCCCCTCCAAAGCTGGGCCAAGAG...AATTCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp CCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTAGAGGGTTGGAAATaGTATGGGCCCTACGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRRVKKASFTSHSTCARSVEGWK*YGPYAA
Trigger: AGCTGCGTAGGGCCCATACCATTTCCAACCCTCTAC...AGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp TGGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATAAAGAGGTAGAGGGTTaGAAATGGTATGGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: WLGPDAQERPPEGPFPGNKEVEG*KWYGPY
Trigger: GTAGGGCCCATACCATTTCCAACCCTCTACCTCTTT...ATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCTGTGCATCTGGACCTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435961.5
CDS-3UTR TCA 90 bp AATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCCCGGTGTTAGCCATGCCTTCTTTCTaGGCACATGGCAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: NLGTETVLGISCSRLPVLAMPSF*AHGSQS
Trigger: AGACTGACTGCCATGTGCTCAGAAAGAAGGCATGGC...TAACACCGGGAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR TCA 90 bp AGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAAACAGAAGACTCTGTGTaGTTCTCATGGCGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SVQGRVQPKPRAQSHYFQTEDSV*FSWRKD
Trigger: GTCCTTCCGCCATGAGAATCACACAGAGTCTTCTGT...TTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp TCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATTCCCAGTCAACATGCTaGGACCAAGAAGAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SFTSHSTCARSVSVHRPHSQSTC*DQEESK
Trigger: TTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGA...ATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp GCAGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCTCCCAGTCAACATGCTaGGACCAAGAAGAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: AVYRVECSPSRGLSLIISSQSTC*DQEESK
Trigger: TTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGA...GGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp AGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTAGACTTCCAGACAGATaGAAAGAGGTAGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RVECSPSRGLSLIISNPSRLPDR*KEVEGW
Trigger: CCAACCCTCTACCTCTTTTCATCTGTCTGGAAGTCT...ACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR GCA 90 bp GTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAGTGCTGGGCATTAGTTaGTCACGCCTCCCGGTGTTA +
Preference number: 4 (lower is better)
Translates to: VGNGMGPTQLIPVLELKGVLGIS*SRLPVL
Trigger: TAACACCGGGAGGCGTGAGCAACTAATGCCCAGCAC...TCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp AACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGGAACAAGGCCCAGGATaGGTCAGTTTGTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NMLRPRRVKKASFTSHSTEQGPG*VSLWSC
Trigger: GCAGCTCCACAAACTGACCCATCCTGGGCCTTGTTC...CGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TGGCTGGAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCCCCCGTCTGTATTCCTaGGCGTCGTTCACTCGGTTG +
Preference number: 4 (lower is better)
Translates to: WLEPVIQRSHKSQRQTFPPRLYS*ASFTRL
Trigger: CAACCGAGTGAACGACGCCCAGGAATACAGACGGGG...GGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTCCAGCCA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000435961.5
CDS-3UTR CCA 90 bp CAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTTCTTTCTGAGCACATaGCAGTCAGTCTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: QGRVQPKPRAQSHYFQSQFFLST*QSVSST
Trigger: TGTGCTAGAGACTGACTGCCATGTGCTCAGAAAGAA...CTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTAAGAGTCAGTGGGTATaGAGCTTGGGCAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VNMLRPRRVKKASFTSHSKSQWV*SLGSQG
Trigger: GCCCTGACTGCCCAAGCTCCATACCCACTGACTCTT...AGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGATTGGAAGAGTCAGTaGGTATGGAGCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PRRVKKASFTSHSTCARSDWKSQ*VWSLGS
Trigger: ACTGCCCAAGCTCCATACCCACTGACTCTTCCAATC...AGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp ATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGCCAGCACTTGGTGATTaGAAGAGTCAGTGGGTATGG +
Preference number: 4 (lower is better)
Translates to: ISRVSPWGFVVRSRCTGKPALGD*KSQWVW
Trigger: CCATACCCACTGACTCTTCCAATCACCAAGTGCTGG...CTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GGGTACAAGGCAGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCAGAGAGAATACTGCTTaGATGTGTTCTCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: GYKAVYRVECSPSRGLSLRENTA*MCSHCC
Trigger: ACAACAATGAGAACACATCCAAGCAGTATTCTCTCT...GAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACTGCCTTGTACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATAGTTTTCACTTCCAGTaGCTGGAGCCTGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: SFTSHSTCARSVSVHRPHSFHFQ*LEPVIQ
Trigger: TTGAATCACAGGCTCCAGCCACTGGAAGTGAAAACT...ATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCTCATGGCGGAAGGAAGTTTTCACTTCCAGTaGCTGGAGCCTGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: CGAPYPYRRLCVILMAEGSFHFQ*LEPVIQ
Trigger: TTGAATCACAGGCTCCAGCCACTGGAAGTGAAAACT...TCCTTCCGCCATGAGAATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCCTCTTGGCCCAGCTTTaGAGGGGGAGTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LFPIPVNMLRPRRVKKASLLAQL*RGSLLG
Trigger: CCCCAACAGACTCCCCCTCCAAAGCTGGGCCAAGAG...GGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp ACTGCTTGGATGTGTTCTCATTGTTGTATTTCGCAAGAGACTCGGTGGCAGCCTCTCCCTGGGGATTCGTaGTTAGGTCCAGATGCACAG +
Preference number: 4 (lower is better)
Translates to: TAWMCSHCCISQETRWQPLPGDS*LGPDAQ
Trigger: CTGTGCATCTGGACCTAACCACGAATCCCCAGGGAG...AGGCTGCCACCGAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp AGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGTGCGTGCTTTTTCTTTaGGGAAAGGCAGGACCACCA +
Preference number: 4 (lower is better)
Translates to: SPSRGLSLIISNPSQHAECVLFL*GKAGPP
Trigger: TGGTGGTCCTGCCTTTCCCCAAAGAAAAAGCACGCA...CTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp AATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCCCGGTGTTAGTAGAGGGTTGGAAATaGTATGGGCCCTACGCAGCT +
Preference number: 4 (lower is better)
Translates to: NLGTETVLGISCSRLPVLVEGWK*YGPYAA
Trigger: AGCTGCGTAGGGCCCATACCATTTCCAACCCTCTAC...TAACACCGGGAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR TCA 90 bp GCTGGAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCAGGCCTCCAGCACTTGGTaGTTGGAAGAGTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: AGACDSKKSQVTETNFSQASSTW*LEESVG
Trigger: ACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGC...CTGGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp ATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCAGCACAGGACTAGGATaGAGAGTGCCAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IKGNLGTETVLGISCSRLSTGLG*RVPGEG
Trigger: TCCTTCCCCTGGCACTCTGCATCCTAGTCCTGTGCT...GAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR GCA 90 bp CAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGCTCATTCCACAGTCTTaGCATGCCTTCTTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QEESKRRPSLATLRVHALLIPQS*HAFFLS
Trigger: GCTCAGAAAGAAGGCATGGCAAGACTGTGGAATGAG...CAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp TCCAGACAGATGAAAAGAGGTAGAGGGTTGGAAATGGTATGGGCCCTACGCAGCGAGTCAGAGAACCTTTaGAAAGACCAACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SRQMKRGRGLEMVWALRSESENL*KDQQAQ
Trigger: CTGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTC...GCTGCGTAGGGCCCATACCATTTCCAACCCTCTACCTCTTTTCATCTGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR GCA 90 bp CTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCAGCACTCAGCAGTGCGTaGTTTTTCTTTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LRPRRVKKASFTSHSTCAALSSA*FFFGER
Trigger: CCTTTCCCCAAAGAAAAAGCACGCACTGCTGAGTGC...TGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp AGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGGCACTCAGCAGTGCGTaGTTTTTCTTTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RKGLLRALFLGIFIIQVRALSSA*FFFGER
Trigger: CCTTTCCCCAAAGAAAAAGCACGCACTGCTGAGTGC...CCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp GTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGACTGGGCACTCAGCAGTaGGTGCTTTTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VGNGMGPTQLIPVLELKGLGTQQ*VLFLWG
Trigger: TCCCCAAAGAAAAAGCACGCACTGCTGAGTGCCCAG...TCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp GTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTAGCAGACCCATTCTGTaGAGAACAAGGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VNMLRPRRVKKASFTSHSSRPIL*RTRPRM
Trigger: CATCCTGGGCCTTGTTCTCCACAGAATGGGTCTGCT...AGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGAACAGCTGCTGGCCTaGGATTTAGTACATGGTGAT +
Preference number: 4 (lower is better)
Translates to: PRRVKKASFTSHSTCARSEQLLA*DLVHGD
Trigger: ATCACCATGTACTAAATCCCAGGCCAGCAGCTGTTC...AGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGAAGATATTGGACAGATCCGAAGGACAAGAGGGCTaGCATTCTGGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ALFLGIFIIQVRKILDRSEGQEG*HSGLAL
Trigger: CAGGGCCAGCCCAGAATGCCAGCCCTCTTGTCCTTC...GGATCTGTCCAATATCTTCCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGAAAGAGGTAGAGGGTTaGAAATGGTATGGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: QEESKRRPSLATLRVHALKEVEG*KWYGPY
Trigger: GTAGGGCCCATACCATTTCCAACCCTCTACCTCTTT...CAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR TCA 90 bp TGCTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAATGCTTTCATGCCATGCCTTCTTTCTaGGCACATGGCAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: CSRLPVLGKVSLLMQCFHAMPSF*AHGSQS
Trigger: AGACTGACTGCCATGTGCTCAGAAAGAAGGCATGGC...ATGAAAGCATTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR TCA 90 bp ACTGCTTGGATGTGTTCTCATTGTTGTATTTCGCAAGAGACTCGGTGGCAGCCTACAGAAGACTCTGTGTaGTTCTCATGGCGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TAWMCSHCCISQETRWQPTEDSV*FSWRKD
Trigger: GTCCTTCCGCCATGAGAATCACACAGAGTCTTCTGT...AGGCTGCCACCGAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp ACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCTCTTTACTCATGCAATaGTTTCATGCTGAGATTTCA +
Preference number: 4 (lower is better)
Translates to: TSHSTCARSVSVHRPHRLSLLMQ*FHAEIS
Trigger: TGAAATCTCAGCATGAAAGCATTGCATGAGTAAAGA...GAGGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp GTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAGATTGGAAGAGTCAGTaGGTATGGAGCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VGNGMGPTQLIPVLELKGDWKSQ*VWSLGS
Trigger: ACTGCCCAAGCTCCATACCCACTGACTCTTCCAATC...TCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp AGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGCCAGCACTTGGTGATTaGAAGAGTCAGTGGGTATGG +
Preference number: 4 (lower is better)
Translates to: RVGNGMGPTQLIPVLELKPALGD*KSQWVW
Trigger: CCATACCCACTGACTCTTCCAATCACCAAGTGCTGG...CTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp TTCTTCCACCTTGGGAAGGTTTGTAGGTTTCTGGTTAACAGCAGAGTTTTCACTTCGCAAGAGACTCGGTaGCAGCCTCCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: FFHLGKVCRFLVNSRVFTSQETR*QPPALG
Trigger: ACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGA...AGTGAAAACTCTGCTGTTAACCAGAAACCTACAAACCTTCCCAAGGTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GAGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGGTGTTTTTCTGCTaGGATTCTTCCACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: EGWKWYGPYAANTCPGIKGVFFC*DSSTLG
Trigger: TCCCAAGGTGGAAGAATCCCAGCAGAAAAACACCCC...TTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp TTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCCTCCCTGGGGATTCGTaGTTAGGTCCAGATGCACAG +
Preference number: 4 (lower is better)
Translates to: LFPIPVNMLRPRRVKKASLPGDS*LGPDAQ
Trigger: CTGTGCATCTGGACCTAACCACGAATCCCCAGGGAG...GGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGAGAGGCATCTCTCCATaGTATGAGACTGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QEESKRRPSLATLRVHALRGISP*YETAQF
Trigger: AAACTGAGCAGTCTCATACCATGGAGAGATGCCTCT...CAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TTCTTCCACCTTGGGAAGGTTTGTAGGTTTCTGGTTAACAGCAGAGTTTTCACTGCCCGTCTGTATTCCTaGGCGTCGTTCACTCGGTTG +
Preference number: 4 (lower is better)
Translates to: FFHLGKVCRFLVNSRVFTARLYS*ASFTRL
Trigger: CAACCGAGTGAACGACGCCCAGGAATACAGACGGGC...AGTGAAAACTCTGCTGTTAACCAGAAACCTACAAACCTTCCCAAGGTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420570.1
CDS-3UTR TCA 90 bp GAAGAGAGAATACTGCTTGGATGTGTTCTCATTGTTGTATTTCGCAAGAGACTCACAGAGTCGGAGGACTaGAGTGAACAGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EERILLGCVLIVVFRKRLTESED*SEQLLA
Trigger: GGCCAGCAGCTGTTCACTTCAGTCCTCCGACTCTGT...GAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp CGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTGGCTGGAGCCTGTaGTTCAAAGAAGTCACAAGT +
Preference number: 4 (lower is better)
Translates to: RGLSLIISNPSQHAETKKSGWSL*FKEVTS
Trigger: ACTTGTGACTTCTTTGAATCACAGGCTCCAGCCACT...CTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp GAGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAACTCATTCCACAGTCTTaGCATGCCTTCTTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: EGWKWYGPYAANTCPGIKLIPQS*HAFFLS
Trigger: GCTCAGAAAGAAGGCATGGCAAGACTGTGGAATGAG...TTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp TCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTAGGTTTGTAGGTTTCTaGTTAACAGCAGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SPPMSCGAPYPYRRLCVIRFVGF*LTAEFS
Trigger: TGAAAACTCTGCTGTTAACCAGAAACCTACAAACCT...AATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TGCTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAATGCTTTCATGGGGTGTTTTTCTGCTaGGATTCTTCCACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: CSRLPVLGKVSLLMQCFHGVFFC*DSSTLG
Trigger: TCCCAAGGTGGAAGAATCCCAGCAGAAAAACACCCC...ATGAAAGCATTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR TCA 90 bp ATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCGTCGTTCACTCGGTTaGGTCTCAGCACATAGCCAT +
Preference number: 4 (lower is better)
Translates to: IISNPSQHAETKKSQKGVRRSLG*VSAHSH
Trigger: ATGGCTATGTGCTGAGACTCAACCGAGTGAACGACG...GACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp ATTAGTTGCTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAATGCAGTGGCTGGAGCCTGTaGTTCAAAGAAGTCACAAGT +
Preference number: 4 (lower is better)
Translates to: ISCSRLPVLGKVSLLMQCSGWSL*FKEVTS
Trigger: ACTTGTGACTTCTTTGAATCACAGGCTCCAGCCACT...GCATTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCAACTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR GCA 90 bp AAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCTTGAAGAGAGAATACTaGTTGGATGTGTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: KRRPSLATLRVHALSLSILKREY*LDVFSL
Trigger: CAATGAGAACACATCCAAGCAGTATTCTCTCTTCAA...GATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAATTGAACAGCTGCTGGCCTaGGATTTAGTACATGGTGAT +
Preference number: 4 (lower is better)
Translates to: GNGMGPTQLIPVLELKGIEQLLA*DLVHGD
Trigger: ATCACCATGTACTAAATCCCAGGCCAGCAGCTGTTC...AATTCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp GTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCAGGTTTGTAGGTTTCTaGTTAACAGCAGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VQPKPRAQSHYFQSQSTCRFVGF*LTAEFS
Trigger: TGAAAACTCTGCTGTTAACCAGAAACCTACAAACCT...GCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAATCCAGGGTTTCTCCCTaGGGATTCGTGGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVSLFPIPVNMLRPRRVKSRVSP*GFVVRS
Trigger: GGACCTAACCACGAATCCCCAGGGAGAAACCCTGGA...TTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGAAGATATTGGACAGATCCGGACTGAAACTGTGCTaGGCATTAGTTGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: ALFLGIFIIQVRKILDRSGLKLC*ALVAHA
Trigger: GGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCC...GGATCTGTCCAATATCTTCCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435961.5
CDS-3UTR GCA 90 bp CTGGTGACTTTGAAGAGAGAATACTGCTTGGATGTGTTCTCATTGTTGTATTTCAGCACAGGACTAGGATaGAGAGTGCCAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LVTLKREYCLDVFSLLYFSTGLG*RVPGEG
Trigger: TCCTTCCCCTGGCACTCTGCATCCTAGTCCTGTGCT...GAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTCAAAGTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAGCAGACCCATTCTGTaGAGAACAAGGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SVSLFPIPVNMLRPRRVKSRPIL*RTRPRM
Trigger: CATCCTGGGCCTTGTTCTCCACAGAATGGGTCTGCT...TTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTAGAGAGAATACTGCTTaGATGTGTTCTCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: PRRVKKASFTSHSTCARSRENTA*MCSHCC
Trigger: ACAACAATGAGAACACATCCAAGCAGTATTCTCTCT...AGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp ATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCAGAGGCATCTCTCCATaGTATGAGACTGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: IKGNLGTETVLGISCSRLRGISP*YETAQF
Trigger: AAACTGAGCAGTCTCATACCATGGAGAGATGCCTCT...GAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
3UTR CAA 72 bp ACTTTGAAGAGAGAATACTGCTTGGATGTGTTCTCATaGTTGTATTTCGCAAGAGACTCGGTGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TLKREYCLDVFS*LYFARDSVAAS
Trigger: GGAGGCTGCCACCGAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR TCA 90 bp TTCTTCCACCTTGGGAAGGTTTGTAGGTTTCTGGTTAACAGCAGAGTTTTCACTAGTGGCTGGAGCCTGTaGTTCAAAGAAGTCACAAGT +
Preference number: 4 (lower is better)
Translates to: FFHLGKVCRFLVNSRVFTSGWSL*FKEVTS
Trigger: ACTTGTGACTTCTTTGAATCACAGGCTCCAGCCACT...AGTGAAAACTCTGCTGTTAACCAGAAACCTACAAACCTTCCCAAGGTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCAGTGTGTTCTTTCTGAGCACATaGCAGTCAGTCTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: EPVIQRSHKSQRQTFPSVFFLST*QSVSST
Trigger: TGTGCTAGAGACTGACTGCCATGTGCTCAGAAAGAA...CACACTGGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GAAGAGAGAATACTGCTTGGATGTGTTCTCATTGTTGTATTTCGCAAGAGACTCGATTGGAAGAGTCAGTaGGTATGGAGCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EERILLGCVLIVVFRKRLDWKSQ*VWSLGS
Trigger: ACTGCCCAAGCTCCATACCCACTGACTCTTCCAATC...GAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCAAGTCAGGAAGATATTaGACAGATCCTCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LFPIPVNMLRPRRVKKASKSGRY*TDPLGP
Trigger: TGGGCCAAGAGGATCTGTCCAATATCTTCCTGACTT...GGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp GAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCAGTGTGAAGTCAGGAAGATATTaGACAGATCCTCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EPVIQRSHKSQRQTFPSVKSGRY*TDPLGP
Trigger: TGGGCCAAGAGGATCTGTCCAATATCTTCCTGACTT...CACACTGGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp TCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAATGCGTGCTTTTTCTTTaGGGAAAGGCAGGACCACCA +
Preference number: 4 (lower is better)
Translates to: SVSLFPIPVNMLRPRRVKCVLFL*GKAGPP
Trigger: TGGTGGTCCTGCCTTTCCCCAAAGAAAAAGCACGCA...TTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp CTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCAAAGTATCTTTACTCATaGAATGCTTTCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LRPRRVKKASFTSHSTCAKYLYS*NAFMLR
Trigger: TCTCAGCATGAAAGCATTGCATGAGTAAAGATACTT...TGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CCA 90 bp GTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTAGGTTTGTAGGTTTCTaGTTAACAGCAGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VNMLRPRRVKKASFTSHSRFVGF*LTAEFS
Trigger: TGAAAACTCTGCTGTTAACCAGAAACCTACAAACCT...AGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp AACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTCTTTACTCATGCAATaGTTTCATGCTGAGATTTCA +
Preference number: 4 (lower is better)
Translates to: NMLRPRRVKKASFTSHSTSLLMQ*FHAEIS
Trigger: TGAAATCTCAGCATGAAAGCATTGCATGAGTAAAGA...CGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR GCA 90 bp TGGCTGGAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCAAGTATCTTTACTCATaGAATGCTTTCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WLEPVIQRSHKSQRQTFPKYLYS*NAFMLR
Trigger: TCTCAGCATGAAAGCATTGCATGAGTAAAGATACTT...GGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTCCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435961.5
CDS-3UTR CCA 90 bp CTGGTGACTTTGAAGAGAGAATACTGCTTGGATGTGTTCTCATTGTTGTATTTCAAGTCAGGAAGATATTaGACAGATCCTCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LVTLKREYCLDVFSLLYFKSGRY*TDPLGP
Trigger: TGGGCCAAGAGGATCTGTCCAATATCTTCCTGACTT...GAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTCAAAGTCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR GCA 90 bp GAAGAGAGAATACTGCTTGGATGTGTTCTCATTGTTGTATTTCGCAAGAGACTCTTGAAGAGAGAATACTaGTTGGATGTGTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: EERILLGCVLIVVFRKRLLKREY*LDVFSL
Trigger: CAATGAGAACACATCCAAGCAGTATTCTCTCTTCAA...GAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CCA 90 bp CTGGTGACTTTGAAGAGAGAATACTGCTTGGATGTGTTCTCATTGTTGTATTTCAGAGAGAATACTGCTTaGATGTGTTCTCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVTLKREYCLDVFSLLYFRENTA*MCSHCC
Trigger: ACAACAATGAGAACACATCCAAGCAGTATTCTCTCT...GAAATACAACAATGAGAACACATCCAAGCAGTATTCTCTCTTCAAAGTCACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS CCA 90 bp TCATTGCAGCCCCGGGAGAGCAGAGCCGAGGGGTTGAGGGCCAGCTaGGGTGGAGACATTGCTCCGCAGCACAGGACTAGGATGCAGAGT +
Preference number: 5 (lower is better)
Translates to: SLQPRESRAEGLRAS*GGDIAPQHRTRMQS
Trigger: ACTCTGCATCCTAGTCCTGTGCTGCGGAGCAATGTCTCCACCCCAGCTGGCCCTCAACCCCTCGGCTCTGCTCTCCCGGGGCTGCAATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265029.8
ENST00000382134.7
ENST00000382136.3
ENST00000420570.1
ENST00000435961.5
ENST00000450521.5
ENST00000488561.1
CDS-3UTR CAA 90 bp CTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCCAGGATGGGTCAGTTaGTGGAGCTGCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: LSLSIVPIASHVMRRTIPPGWVS*WSCRDW
Trigger: CCAGTCCCTGCAGCTCCACAAACTGACCCATCCTGG...GGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp ACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCAAGATCCCAGGCCACCTaGCCCGTCTGTATTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TLCLCPSSPSPPMSCGAPRSQAT*PVCIPG
Trigger: CCCAGGAATACAGACGGGCAAGGTGGCCTGGGATCT...TGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420570.1
CDS-3UTR CAA 90 bp TCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATAGCAGAGCCGAGGGGTaGAGGGCCAGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SFTSHSTCARSVSVHRPHSRAEG*RASWGG
Trigger: TCCACCCCAGCTGGCCCTCAACCCCTCGGCTCTGCT...ATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCAGCACATCTGAGTCATaGCAGCCCCGGGAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VCTLCLCPSSPSPPMSCGSTSES*QPRESR
Trigger: TCTGCTCTCCCGGGGCTGCAATGACTCAGATGTGCT...GCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAGAGCGTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS TCA 90 bp TTTGTTAATATCCCGCAGGGCAAAGCCTGCAACTGCCAGCACATCTaGGTCATTGCAGCCCCGGGAGAGCAGAGCCGAGGGGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: FVNIPQGKACNCQHI*VIAAPGEQSRGVEG
Trigger: GCCCTCAACCCCTCGGCTCTGCTCTCCCGGGGCTGCAATGACTCAGATGTGCTGGCAGTTGCAGGCTTTGCCCTGCGGGATATTAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265029.8
ENST00000382134.7
ENST00000382136.3
ENST00000420570.1
ENST00000435961.5
ENST00000450521.5
ENST00000488561.1
CDS-3UTR CAA 90 bp TCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCAGCACATCTGAGTCATaGCAGCCCCGGGAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SLATLRVHALSLSIVPIASTSES*QPRESR
Trigger: TCTGCTCTCCCGGGGCTGCAATGACTCAGATGTGCT...GGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS CCA 90 bp AGGACTAGGATGCAGAGTGCCAGGGGAAGGAGCAGACCCATTCTGTaGAGAACAAGGCCCAGGATGGGTCAGTTTGTGGAGCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RTRMQSARGRSRPIL*RTRPRMGQFVELQG
Trigger: TCCCTGCAGCTCCACAAACTGACCCATCCTGGGCCTTGTTCTCCACAGAATGGGTCTGCTCCTTCCCCTGGCACTCTGCATCCTAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265029.8
ENST00000382134.7
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp AGACTCGGTGGCAGCCTCCAGCACTTGGTGATTGGAAGAGTCAGTGGGTATGGAGCTGGGGTGGAGACATaGCTCCGCAGCACAGGACTA +
Preference number: 5 (lower is better)
Translates to: RLGGSLQHLVIGRVSGYGAGVET*LRSTGL
Trigger: TAGTCCTGTGCTGCGGAGCAATGTCTCCACCCCAGC...TCCATACCCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTCCTCATTCCACAGTCTaGCCATGCCTTCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: VSVHRPHRLPCHAAHHTPPHSTV*PCLLSE
Trigger: CTCAGAAAGAAGGCATGGCAAGACTGTGGAATGAGG...AGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp TTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGAGCAGTGGGTATGGAGCTaGGGCAGTCAGGGCACGTCA +
Preference number: 5 (lower is better)
Translates to: FLPGDSWLGPDAQERPPEQWVWS*GSQGTS
Trigger: TGACGTGCCCTGACTGCCCAAGCTCCATACCCACTG...CTCAGGAGGCCTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp AAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGCTGGGGTGGAGACATaGCTCCGCAGCACAGGACTA +
Preference number: 5 (lower is better)
Translates to: KRRPSLATLRVHALSLSIAGVET*LRSTGL
Trigger: TAGTCCTGTGCTGCGGAGCAATGTCTCCACCCCAGC...GATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCCAGTGGGTATGGAGCTaGGGCAGTCAGGGCACGTCA +
Preference number: 5 (lower is better)
Translates to: VQPKPRAQSHYFQSQSTCQWVWS*GSQGTS
Trigger: TGACGTGCCCTGACTGCCCAAGCTCCATACCCACTG...GCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp CTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCGAAGCCCTGGTGACTTaGAAGAGAGAATACTGCTTG +
Preference number: 5 (lower is better)
Translates to: LSLSIVPIASHVMRRTIPEALVT*KREYCL
Trigger: CAAGCAGTATTCTCTCTTCAAAGTCACCAGGGCTTC...GGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp CAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGCCAGGATGGGTCAGTTaGTGGAGCTGCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: QEESKRRPSLATLRVHALPGWVS*WSCRDW
Trigger: CCAGTCCCTGCAGCTCCACAAACTGACCCATCCTGG...CAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp TGGCTGGAGCCTGTGATTCAAAGAAGTCACAAGTCACAGAGACAAACTTTTCCCAGCAGAGCCGAGGGGTaGAGGGCCAGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: WLEPVIQRSHKSQRQTFPSRAEG*RASWGG
Trigger: TCCACCCCAGCTGGCCCTCAACCCCTCGGCTCTGCT...GGGAAAAGTTTGTCTCTGTGACTTGTGACTTCTTTGAATCACAGGCTCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp ATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCAGCAGAGCCGAGGGGTaGAGGGCCAGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: IKGNLGTETVLGISCSRLSRAEG*RASWGG
Trigger: TCCACCCCAGCTGGCCCTCAACCCCTCGGCTCTGCT...GAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp TCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACCATCCTTTCTGTCTTaGTTAATATCCCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SLSIVPIASHVMRRTIPLPSFLS*LISRRA
Trigger: TGCCCTGCGGGATATTAACAAAGACAGAAAGGATGG...TAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp TGGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATGGCAGCCTCCAGCACTaGGTGATTGGAAGAGTCAGT +
Preference number: 5 (lower is better)
Translates to: WLGPDAQERPPEGPFPGNGSLQH*VIGRVS
Trigger: ACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCC...ATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCTGTGCATCTGGACCTAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCATTGGACAGATCCTCTaGGCCCAGCTTTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: VQPKPRAQSHYFQSQSTCIGQIL*AQLWRG
Trigger: CCCCCTCCAAAGCTGGGCCAAGAGGATCTGTCCAAT...GCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GAGGTAGAGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTGGACAGATCCTCTaGGCCCAGCTTTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: EVEGWKWYGPYAANTCPGIGQIL*AQLWRG
Trigger: CCCCCTCCAAAGCTGGGCCAAGAGGATCTGTCCAAT...TCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCTCTACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp TGGTTAGGTCCAGATGCACAGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATGTGCGTGCTTTTTCTTaGGGGAAAGGCAGGACCACC +
Preference number: 5 (lower is better)
Translates to: WLGPDAQERPPEGPFPGNVRAFS*GKGRTT
Trigger: GGTGGTCCTGCCTTTCCCCAAAGAAAAAGCACGCAC...ATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCTGTGCATCTGGACCTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp TCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCCCATCCTTTCTGTCTTaGTTAATATCCCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SLATLRVHALSLSIVPIAPSFLS*LISRRA
Trigger: TGCCCTGCGGGATATTAACAAAGACAGAAAGGATGG...GGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp ACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCGAAGCCCTGGTGACTTaGAAGAGAGAATACTGCTTG +
Preference number: 5 (lower is better)
Translates to: TSHSTCARSVSVHRPHRLEALVT*KREYCL
Trigger: CAAGCAGTATTCTCTCTTCAAAGTCACCAGGGCTTC...GAGGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GAGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAACCTCTTGGCCCAGCTTaGGAGGGGGAGTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: EGWKWYGPYAANTCPGIKPLGPA*EGESVG
Trigger: CCCAACAGACTCCCCCTCCAAAGCTGGGCCAAGAGG...TTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp CCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCCAAGTCAGGAAGATATaGGACAGATCCTCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: PSLATLRVHALSLSIVPIQVRKI*DRSSWP
Trigger: GGGCCAAGAGGATCTGTCCAATATCTTCCTGACTTG...GATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTGGCAGCCTCCAGCACTaGGTGATTGGAAGAGTCAGT +
Preference number: 5 (lower is better)
Translates to: EESKRRPSLATLRVHALSGSLQH*VIGRVS
Trigger: ACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCC...AGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp CTGTCTCTGTCCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCTTGGATGTGTTCTCATaGTTGTATTTCGCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: LSLSIVPIASHVMRRTIPLDVFS*LYFARD
Trigger: GTCTCTTGCGAAATACAACAATGAGAACACATCCAA...GGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGGACAGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp ATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACGCCTCCCTCTTGGCCCAGCTTaGGAGGGGGAGTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: IKGNLGTETVLGISCSRLPLGPA*EGESVG
Trigger: CCCAACAGACTCCCCCTCCAAAGCTGGGCCAAGAGG...GAGGCGTGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp AAGGAAATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAATTGGACAGATCCTCTaGGCCCAGCTTTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KEISRVSPWGFVVRSRCTIGQIL*AQLWRG
Trigger: CCCCCTCCAAAGCTGGGCCAAGAGGATCTGTCCAAT...TGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATATTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp TCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGACTCTGTGTGATTCAAGTCAGGAAGATATaGGACAGATCCTCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: SPPMSCGAPYPYRRLCVIQVRKI*DRSSWP
Trigger: GGGCCAAGAGGATCTGTCCAATATCTTCCTGACTTG...AATCACACAGAGTCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTGTGCGTGCTTTTTCTTaGGGGAAAGGCAGGACCACC +
Preference number: 5 (lower is better)
Translates to: EESKRRPSLATLRVHALSVRAFS*GKGRTT
Trigger: GGTGGTCCTGCCTTTCCCCAAAGAAAAAGCACGCAC...AGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS CCA 90 bp AACAAGGCCCAGGATGGGTCAGTTTGTGGAGCTGCAGGGACTGGCTaGCTTGTAAGGCTCTTTAAGGCAGACTTGAGCGGTTTTGTTACA +
Preference number: 5 (lower is better)
Translates to: NKAQDGSVCGAAGTG*LVRLFKADLSGFVT
Trigger: TGTAACAAAACCGCTCAAGTCTGCCTTAAAGAGCCTTACAAGCCAGCCAGTCCCTGCAGCTCCACAAACTGACCCATCCTGGGCCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382134.7
CDS-3UTR CAA 90 bp GGCATTAGTTGCTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAAAGCACATCTGAGTCATaGCAGCCCCGGGAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: GISCSRLPVLGKVSLLMQSTSES*QPRESR
Trigger: TCTGCTCTCCCGGGGCTGCAATGACTCAGATGTGCT...TTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCAACTAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp CCATCGTCCCCATCGCCTCCCATGTCATGCGGCGCACCATACCCCTACAGAAGATTGGATGTGTTCTCATaGTTGTATTTCGCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: PSSPSPPMSCGAPYPYRRLDVFS*LYFARD
Trigger: GTCTCTTGCGAAATACAACAATGAGAACACATCCAA...TCTTCTGTAGGGGTATGGTGCGCCGCATGACATGGGAGGCGATGGGGACGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp ATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACAGGAAAGCCTCATTCCACAGTCTaGCCATGCCTTCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: ISRVSPWGFVVRSRCTGKPHSTV*PCLLSE
Trigger: CTCAGAAAGAAGGCATGGCAAGACTGTGGAATGAGG...CTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp CCTGGAATTAAAGGGAATTTAGGGACTGAAACTGTGCTGGGCATTAGTTGCTCACAGTGGGTATGGAGCTaGGGCAGTCAGGGCACGTCA +
Preference number: 5 (lower is better)
Translates to: PGIKGNLGTETVLGISCSQWVWS*GSQGTS
Trigger: TGACGTGCCCTGACTGCCCAAGCTCCATACCCACTG...TGAGCAACTAATGCCCAGCACAGTTTCAGTCCCTAAATTCCCTTTAATTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp GTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGGGAGGCAGCCTCCAGCACTaGGTGATTGGAAGAGTCAGT +
Preference number: 5 (lower is better)
Translates to: VGNGMGPTQLIPVLELKGGSLQH*VIGRVS
Trigger: ACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCC...TCCCTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp CCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGATGTGTTCTCATTGTaGTATTTCGCAAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: PSLATLRVHALSLSIVPIDVFSL*YFARDS
Trigger: CGAGTCTCTTGCGAAATACAACAATGAGAACACATC...GATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp TCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTTGGATGTGTTCTCATaGTTGTATTTCGCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: SLATLRVHALSLSIVPIALDVFS*LYFARD
Trigger: GTCTCTTGCGAAATACAACAATGAGAACACATCCAA...GGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp ACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCGCCTCAAGAGAGAATACTGCTaGGATGTGTTCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: TSHSTCARSVSVHRPHRLKREYC*DVFSLL
Trigger: CAACAATGAGAACACATCCAAGCAGTATTCTCTCTT...GAGGCGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp AGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGCGAGTCAGAGAACCTTaGCAAAGACCAACAGGCACA +
Preference number: 5 (lower is better)
Translates to: SPSRGLSLIISNPSQHAERVREP*QRPTGT
Trigger: TGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTCG...CTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp GCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGAAGATATTGGACAGATCCCCTCTTGGCCCAGCTTaGGAGGGGGAGTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: ALFLGIFIIQVRKILDRSPLGPA*EGESVG
Trigger: CCCAACAGACTCCCCCTCCAAAGCTGGGCCAAGAGG...GGATCTGTCCAATATCTTCCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp ATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCCAGGATGGGTCAGTTaGTGGAGCTGCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: IISNPSQHAETKKSQKGVPGWVS*WSCRDW
Trigger: CCAGTCCCTGCAGCTCCACAAACTGACCCATCCTGG...GACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp CCTTCACTAGCCACTCTACGTGTGCACGCTCTGTCTCTGTCCATCGTCCCCATCAAGAGAGAATACTGCTaGGATGTGTTCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: PSLATLRVHALSLSIVPIKREYC*DVFSLL
Trigger: CAACAATGAGAACACATCCAAGCAGTATTCTCTCTT...GATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp AGTGTACAGGGTAGAGTGCAGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAAGAAGCCCTGGTGACTTaGAAGAGAGAATACTGCTTG +
Preference number: 5 (lower is better)
Translates to: SVQGRVQPKPRAQSHYFQEALVT*KREYCL
Trigger: CAAGCAGTATTCTCTCTTCAAAGTCACCAGGGCTTC...TTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCTGCACTCTACCCTGTACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp AGGAAAGGCCTCCTGAGGGCCCTTTTCCTGGGAATTTTTATCATCCAAGTCAGGCGAGTCAGAGAACCTTaGCAAAGACCAACAGGCACA +
Preference number: 5 (lower is better)
Translates to: RKGLLRALFLGIFIIQVRRVREP*QRPTGT
Trigger: TGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTCG...CCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGCCCTCAGGAGGCCTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp CTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCACTAGCCACTCTACGTGTGCACAAGTCAGGAAGATATaGGACAGATCCTCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: LRPRRVKKASFTSHSTCAQVRKI*DRSSWP
Trigger: GGGCCAAGAGGATCTGTCCAATATCTTCCTGACTTG...TGCACACGTAGAGTGGCTAGTGAAGGACGCCTTTTTGACTCTTCTTGGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp AAGGAAATATCCAGGGTTTCTCCCTGGGGATTCGTGGTTAGGTCCAGATGCACACCATCCTTTCTGTCTTaGTTAATATCCCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: KEISRVSPWGFVVRSRCTPSFLS*LISRRA
Trigger: TGCCCTGCGGGATATTAACAAAGACAGAAAGGATGG...TGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATATTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp ACTGCTTGGATGTGTTCTCATTGTTGTATTTCGCAAGAGACTCGGTGGCAGCCTCCTCATTCCACAGTCTaGCCATGCCTTCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: TAWMCSHCCISQETRWQPPHSTV*PCLLSE
Trigger: CTCAGAAAGAAGGCATGGCAAGACTGTGGAATGAGG...AGGCTGCCACCGAGTCTCTTGCGAAATACAACAATGAGAACACATCCAAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp AGGGTTGGAAATGGTATGGGCCCTACGCAGCTAATACCTGTCCTGGAATTAAAGCGAGTCAGAGAACCTTaGCAAAGACCAACAGGCACA +
Preference number: 5 (lower is better)
Translates to: RVGNGMGPTQLIPVLELKRVREP*QRPTGT
Trigger: TGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTCG...CTTTAATTCCAGGACAGGTATTAGCTGCGTAGGGCCCATACCATTTCCAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp AGCCCAAGCCGAGGGCTCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGGATGTGTTCTCATTGTaGTATTTCGCAAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: SPSRGLSLIISNPSQHAEDVFSL*YFARDS
Trigger: CGAGTCTCTTGCGAAATACAACAATGAGAACACATC...CTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGAGCCCTCGGCTTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp TCAGTCTCATTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAGTGCGTGCTTTTTCTTaGGGGAAAGGCAGGACCACC +
Preference number: 5 (lower is better)
Translates to: SVSLFPIPVNMLRPRRVKVRAFS*GKGRTT
Trigger: GGTGGTCCTGCCTTTCCCCAAAGAAAAAGCACGCAC...TTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAATGAGACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
CDS-3UTR CAA 90 bp TTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCTTCAAAAGAGGTAGAGGGTaGGAAATGGTATGGGCCCTA +
Preference number: 5 (lower is better)
Translates to: FPIPVNMLRPRRVKKASFKRGRG*EMVWAL
Trigger: TAGGGCCCATACCATTTCCAACCCTCTACCTCTTTT...GAAGGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp TTATTTCCAATCCCAGTCAACATGCTGAGACCAAGAAGAGTCAAAAAGGCGTCCAAAAGAGGTAGAGGGTaGGAAATGGTATGGGCCCTA +
Preference number: 5 (lower is better)
Translates to: LFPIPVNMLRPRRVKKASKRGRG*EMVWAL
Trigger: TAGGGCCCATACCATTTCCAACCCTCTACCTCTTTT...GGACGCCTTTTTGACTCTTCTTGGTCTCAGCATGTTGACTGGGATTGGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp ATTAGTTGCTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAATGCGATGTGTTCTCATTGTaGTATTTCGCAAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: ISCSRLPVLGKVSLLMQCDVFSL*YFARDS
Trigger: CGAGTCTCTTGCGAAATACAACAATGAGAACACATC...GCATTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCAACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS-3UTR CAA 90 bp TGCTCACGCCTCCCGGTGTTAGGGAAAGTATCTTTACTCATGCAATGCTTTCATAAGAGAGAATACTGCTaGGATGTGTTCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: CSRLPVLGKVSLLMQCFHKREYC*DVFSLL
Trigger: CAACAATGAGAACACATCCAAGCAGTATTCTCTCTT...ATGAAAGCATTGCATGAGTAAAGATACTTTCCCTAACACCGGGAGGCGTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265029.8
ENST00000435961.5
CDS CCA 72 bp CCCCGGGAGAGCAGAGCCGAGGGGTTGAGGGCCAGCTaGGGTGGAGACATTGCTCCGCAGCACAGGACTAGG +
Preference number: 6 (lower is better)
Translates to: PRESRAEGLRAS*GGDIAPQHRTR
Trigger: CCTAGTCCTGTGCTGCGGAGCAATGTCTCCACCCCAGCTGGCCCTCAACCCCTCGGCTCTGCTCTCCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265029.8
ENST00000382134.7
ENST00000382136.3
ENST00000420570.1
ENST00000435961.5
ENST00000450521.5
ENST00000488561.1
CDS CAA 90 bp ATATCCCGCAGGGCAAAGCCTGCAACTGCCAGCACATCTGAGTCATaGCAGCCCCGGGAGAGCAGAGCCGAGGGGTTGAGGGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: ISRRAKPATASTSES*QPRESRAEGLRASW
Trigger: CCAGCTGGCCCTCAACCCCTCGGCTCTGCTCTCCCGGGGCTGCAATGACTCAGATGTGCTGGCAGTTGCAGGCTTTGCCCTGCGGGATAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265029.8
ENST00000382134.7
ENST00000382136.3
ENST00000420570.1
ENST00000435961.5
ENST00000450521.5
ENST00000488561.1
CDS CCA 72 bp ATGCAGAGTGCCAGGGGAAGGAGCAGACCCATTCTGTaGAGAACAAGGCCCAGGATGGGTCAGTTTGTGGAG +
Preference number: 6 (lower is better)
Translates to: MQSARGRSRPIL*RTRPRMGQFVE
Trigger: CTCCACAAACTGACCCATCCTGGGCCTTGTTCTCCACAGAATGGGTCTGCTCCTTCCCCTGGCACTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265029.8
ENST00000382134.7
ENST00000420570.1
ENST00000435961.5
CDS CAA 72 bp CCATTCTGTGGAGAACAAGGCCCAGGATGGGTCAGTTaGTGGAGCTGCAGGGACTGGCTGGCTTGTAAGGCT +
Preference number: 6 (lower is better)
Translates to: PFCGEQGPGWVS*WSCRDWLACKA
Trigger: AGCCTTACAAGCCAGCCAGTCCCTGCAGCTCCACAAACTGACCCATCCTGGGCCTTGTTCTCCACAGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382134.7
ENST00000435961.5
CDS CAA 72 bp GCCAGTCACACCTTCAGGGTTCCTGAGGACCCAGAGTaGTTCAGGCCTGGGGGTGAGTATACTGACCCTATG +
Preference number: 6 (lower is better)
Translates to: ASHTFRVPEDPE*FRPGGEYTDPM
Trigger: CATAGGGTCAGTATACTCACCCCCAGGCCTGAACAACTCTGGGTCCTCAGGAACCCTGAAGGTGTGACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431018.5
ENST00000450521.5
CDS CCA 72 bp CAGGATGGGTCAGTTTGTGGAGCTGCAGGGACTGGCTaGCTTGTAAGGCTCTTTAAGGCAGACTTGAGCGGT +
Preference number: 6 (lower is better)
Translates to: QDGSVCGAAGTG*LVRLFKADLSG
Trigger: ACCGCTCAAGTCTGCCTTAAAGAGCCTTACAAGCCAGCCAGTCCCTGCAGCTCCACAAACTGACCCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382134.7
CDS CCA 72 bp TTCTGTGGAGAACAAGGCCCAGGATGGGTCAGTTTGTaGAGCTGCAGGGACTGGCTGGCTTGTAAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: FCGEQGPGWVSL*SCRDWLACKAL
Trigger: AAGAGCCTTACAAGCCAGCCAGTCCCTGCAGCTCCACAAACTGACCCATCCTGGGCCTTGTTCTCCACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382134.7
CDS CAA 90 bp CTCAGCTTTGCCAGTCACACCTTCAGGGTTCCTGAGGACCCAGAGTaGTTCAGGCCTGGGGGTGAGTATACTGACCCTATGCATAGGCAA +
Preference number: 6 (lower is better)
Translates to: LSFASHTFRVPEDPE*FRPGGEYTDPMHRQ
Trigger: TTGCCTATGCATAGGGTCAGTATACTCACCCCCAGGCCTGAACAACTCTGGGTCCTCAGGAACCCTGAAGGTGTGACTGGCAAAGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431018.5
ENST00000450521.5
CDS TCA 72 bp CACCCCGTCTGTATTCCTGGGCGTCGTTCACTCGGTTaGGTCTCAGCACATAGCCATCCTTTCTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: HPVCIPGRRSLG*VSAHSHPFCLC
Trigger: ACAAAGACAGAAAGGATGGCTATGTGCTGAGACTCAACCGAGTGAACGACGCCCAGGAATACAGACGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265029.8
ENST00000435961.5
ENST00000450521.5
CDS TCA 72 bp TTGCCCGTCTGTATTCCTGGGCGTCGTTCACTCGGTTaGGTCTCAGCACATAGCCATCCTTTCTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: LPVCIPGRRSLG*VSAHSHPFCLC
Trigger: ACAAAGACAGAAAGGATGGCTATGTGCTGAGACTCAACCGAGTGAACGACGCCCAGGAATACAGACGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382134.7
ENST00000420570.1
CDS TCA 72 bp AAACCCGTCTGTATTCCTGGGCGTCGTTCACTCGGTTaGGTCTCAGCACATAGCCATCCTTTCTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: KPVCIPGRRSLG*VSAHSHPFCLC
Trigger: ACAAAGACAGAAAGGATGGCTATGTGCTGAGACTCAACCGAGTGAACGACGCCCAGGAATACAGACGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382136.3
CDS TCA 72 bp AGGGGAAGGAGCAGACCCATTAGTTGTGCTGGTTTATaGAAAGATGTCAAGGATGCTGTAGGCGCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: RGRSRPISCAGL*KDVKDAVGAVL
Trigger: GAGGACTGCGCCTACAGCATCCTTGACATCTTTTCATAAACCAGCACAACTAATGGGTCTGCTCCTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450521.5
CDS TCA 72 bp GAAACCGTCTGTATTCCTGGGCGTCGTTCACTCGGTTaGGTCTCAGCACATAGCCATCCTTTCTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: ETVCIPGRRSLG*VSAHSHPFCLC
Trigger: ACAAAGACAGAAAGGATGGCTATGTGCTGAGACTCAACCGAGTGAACGACGCCCAGGAATACAGACGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488561.1
CDS TCA 72 bp ATATCCTCATTCCACAGTCTTGCCATGCCTTCTTTCTaGGCACATGGCAGTCAGTCTCTAGCACATCCAGTG +
Preference number: 6 (lower is better)
Translates to: ISSFHSLAMPSF*AHGSQSLAHPV
Trigger: CACTGGATGTGCTAGAGACTGACTGCCATGTGCTCAGAAAGAAGGCATGGCAAGACTGTGGAATGAGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265029.8
ENST00000420570.1
ENST00000435961.5
ENST00000450521.5
CDS CAA 90 bp AAGCAGCTAAATAGAGAACTCTACTTGGGTTGTTCATATAAAATATaGCTTTGCATTGACCATAAACCCGTCTGTATTCCTGGGCGTCGT +
Preference number: 6 (lower is better)
Translates to: KQLNRELYLGCSYKI*LCIDHKPVCIPGRR
Trigger: ACGACGCCCAGGAATACAGACGGGTTTATGGTCAATGCAAAGCAATATTTTATATGAACAACCCAAGTAGAGTTCTCTATTTAGCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382136.3
CDS CAA 90 bp CTGGGCGAAGAGTACAGTTATAAGCAGCTAAATAGAGAACTCTACTaGGGTTGTTCATATAAAATATTGCTTTGCATTGACCATAAACCC +
Preference number: 6 (lower is better)
Translates to: LGEEYSYKQLNRELY*GCSYKILLCIDHKP
Trigger: GGGTTTATGGTCAATGCAAAGCAATATTTTATATGAACAACCCAAGTAGAGTTCTCTATTTAGCTGCTTATAACTGTACTCTTCGCCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382136.3