RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FERMT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000149781

Ensembl transcript IDs: ENST00000279227.9, ENST00000345728.10, ENST00000540554.1, ENST00000541252.1, ENST00000541326.5, ENST00000544997.5, ENST00000545896.1, ENST00000546255.1

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTaGACAAAGTCAGTGACAGCAGGTGAAATGCCCAGCTGGGTGCCT +
Preference number: 1 (lower is better)
Translates to: GLGDGTASGPARSLA*TKSVTAGEMPSWVP
Trigger: AGGCACCCAGCTGGGCATTTCACCTGCTGTCACTGACTTTGTGCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTGCCTGGAGCGGGTGTaGGGCAGTGAGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: IPGLGDGTASGPARSLACCLERV*GSEPLW
Trigger: CCACAGGGGCTCACTGCCCCACACCCGCTCCAGGCA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCATGCCTGGAGCGGGTGTaGGGCAGTGAGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: RGISLSHSDKERGHHMSSCLERV*GSEPLW
Trigger: CCACAGGGGCTCACTGCCCCACACCCGCTCCAGGCA...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR GCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACGCCCAGCTGGGTGCCTaGCTGGAGCGGGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDAQLGA*LERVWG
Trigger: GCCCCACACCCGCTCCAGGCAGGCACCCAGCTGGGC...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR TCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGTCAGTGACAGCAGGTaGAATGCCCAGCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: RGISLSHSDKERGHHMSSVSDSR*NAQLGA
Trigger: GGCACCCAGCTGGGCATTTCACCTGCTGTCACTGAC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGCCCAGCTGGGTGCCTaGCTGGAGCGGGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGAQLGA*LERVWG
Trigger: GCCCCACACCCGCTCCAGGCAGGCACCCAGCTGGGC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCTGCCTGGAGCGGGTGTaGGGCAGTGAGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCCLERV*GSEPLW
Trigger: CCACAGGGGCTCACTGCCCCACACCCGCTCCAGGCA...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR TCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACAAAGGGGGCACCACATaGGCTCAGGGACCCCCACCC +
Preference number: 2 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDKGGTT*AQGPPP
Trigger: GGGTGGGGGTCCCTGAGCTCATGTGGTGCCCCCTTT...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGCCCAGCTGGGTGCCTaGCTGGAGCGGGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: FETMFHHPVATSGLPCVLAQLGA*LERVWG
Trigger: GCCCCACACCCGCTCCAGGCAGGCACCCAGCTGGGC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR TCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACGTCAGTGACAGCAGGTaGAATGCCCAGCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDVSDSR*NAQLGA
Trigger: GGCACCCAGCTGGGCATTTCACCTGCTGTCACTGAC...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGTACAGCGTCTGGCCCTaGCAGGTCCTTGGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGYSVWP*QVLGLH
Trigger: GTGCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTA...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR CCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCCCCCATCCCTGGCCTaGGTGATGGTACAGCGTCTG +
Preference number: 2 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGPPSLA*VMVQRL
Trigger: CAGACGCTGTACCATCACCCAGGCCAGGGATGGGGG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR TCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGAAAGGGGGCACCACATaGGCTCAGGGACCCCCACCC +
Preference number: 2 (lower is better)
Translates to: FETMFHHPVATSGLPCVLKGGTT*AQGPPP
Trigger: GGGTGGGGGTCCCTGAGCTCATGTGGTGCCCCCTTT...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGCCAGGTCCTTGGCCTaGACAAAGTCAGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCARSLA*TKSVTA
Trigger: TGCTGTCACTGACTTTGTGCAGGCCAAGGACCTGGC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR GCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACGCCAGGTCCTTGGCCTaGACAAAGTCAGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDARSLA*TKSVTA
Trigger: TGCTGTCACTGACTTTGTGCAGGCCAAGGACCTGGC...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTACAGCGTCTGGCCCTaGCAGGTCCTTGGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: FETMFHHPVATSGLPCVLYSVWP*QVLGLH
Trigger: GTGCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCCCCCATCCCTGGCCTaGGTGATGGTACAGCGTCTG +
Preference number: 2 (lower is better)
Translates to: FETMFHHPVATSGLPCVLPPSLA*VMVQRL
Trigger: CAGACGCTGTACCATCACCCAGGCCAGGGATGGGGG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR-3UTR TCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGTCAGTGACAGCAGGTaGAATGCCCAGCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: FETMFHHPVATSGLPCVLVSDSR*NAQLGA
Trigger: GGCACCCAGCTGGGCATTTCACCTGCTGTCACTGAC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
3UTR GCA 72 bp GATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTaGACAAAGTCAGTGACAGCAGGTGAAATGCCCAGC +
Preference number: 3 (lower is better)
Translates to: DGTASGPARSLA*TKSVTAGEMPS
Trigger: GCTGGGCATTTCACCTGCTGTCACTGACTTTGTGCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGCCCAGCTGGGTGCCTaGCTGGAGCGGGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACAQLGA*LERVWG
Trigger: GCCCCACACCCGCTCCAGGCAGGCACCCAGCTGGGC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCCAGCCCTGGGTCTGTaGCAGCCGGCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACPALGL*QPAPPP
Trigger: AGGTGGGGGAGCCGGCTGGCACAGACCCAGGGCTGG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCGAGGCCGTAGGGGTTaGGGCCCTCGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACRGRRG*GPRQRH
Trigger: ATGCCTCTGCCGAGGGCCTCAACCCCTACGGCCTCG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGCAAGGGCTGGGGGCTaGAGGTGGGTCTCGGGCTAC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACARAGG*RWVSGY
Trigger: GTAGCCCGAGACCCACCTGCAGCCCCCAGCCCTTGC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGCGCAGCTGGGCCTCTaGCAGCGACAACTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACAQLGL*QRQLGH
Trigger: GTGGCCCAGTTGTCGCTGGCAGAGGCCCAGCTGCGC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCAGGTCGTCCAGCCCTaGGTCTGTGCCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACQVVQP*VCASRL
Trigger: GAGCCGGCTGGCACAGACCCAGGGCTGGACGACCTG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCCTCGCTGGTGTAGCTaGTGTCGGCCATGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACPRWCS*CRPWCG
Trigger: GCCGCACCATGGCCGACAGCAGCTACACCAGCGAGG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCACCCCTGTGGGCCGTaGGCTTCCTGCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACHPCGP*ASCPPF
Trigger: GAAAGGAGGGCAGGAAGCCCACGGCCCACAGGGGTG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCCTCAGAAGGCCTCATaGCCCCCGGTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACPQKAS*PPVSCR
Trigger: CCTGCAGCTCACCGGGGGCCATGAGGCCTTCTGAGG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCATGGCTGCGGCTGCTaGTTTCCTGGCAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACHGCGC*FPGKGW
Trigger: CCAGCCCTTGCCAGGAAAGCAGCAGCCGCAGCCATG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCAGGATGACGGGCCGGTaGTGGGGCCCAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACRMTGR*WGPKKR
Trigger: CCTCTTCTTTGGGCCCCAGCACCGGCCCGTCATCCT...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCCGGCCTTGATGCCCTaGTGCATGAGACACCGCGAC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACPALMP*CMRHRD
Trigger: GTCGCGGTGTCTCATGCAGCAGGGCATCAAGGCCGG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTACAGCGTCTGGCCCTaGCAGGTCCTTGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACYSVWP*QVLGLH
Trigger: GTGCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCATGACGGGCCGGTGCTaGGGCCCAAAGAAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACMTGRC*GPKKRR
Trigger: ACGCCTCTTCTTTGGGCCCCAGCACCGGCCCGTCAT...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTGTCTGACAGGGAGCTaGGCCGTGGCAGACGCTGGA +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACCLTGS*AVADAG
Trigger: TCCAGCGTCTGCCACGGCCCAGCTCCCTGTCAGACA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTGGCCTGCACCTCGCTaGTGTAGCTGCTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACWPAPR*CSCCRP
Trigger: TGGCCGACAGCAGCTACACCAGCGAGGTGCAGGCCA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGCTCTGGGATGGTGGTaGGGCTGTCCAGCACATCTG +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACALGWW*GCPAHL
Trigger: CAGATGTGCTGGACAGCCTCACCACCATCCCAGAGC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCCCCAAAGAAGAGGCGTaGGTCGGCCAGGATCCCGTA +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACPKEEA*VGQDPV
Trigger: TACGGGATCCTGGCCGACGCACGCCTCTTCTTTGGG...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGCCTTGATGCCCTGCTaGATGAGACACCGCGACGAG +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACALMPC*MRHRDE
Trigger: CTCGTCGCGGTGTCTCATGCAGCAGGGCATCAAGGC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCAGGTCCCACCGGGCCTaGTCATACAGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACRSHRA*SYSCVS
Trigger: GCTGACACAGCTGTATGAGCAGGCCCGGTGGGACCT...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGACCGACTCGGCCTCTaGGTCCTCCTCTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACDRLGL*VLLSHK
Trigger: TTTGTGGGAGAGGAGGACCCAGAGGCCGAGTCGGTC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGAGGCATCAGGGCCGTaGGGGTGGTTGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSEASGP*GWLPGP
Trigger: GGGCCCGGGCAACCACCCCCACGGCCCTGATGCCTC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTGGATGAAGCGCAGCTaGGCCTCTGCCAGCGACAAC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACWMKRS*ASASDN
Trigger: GTTGTCGCTGGCAGAGGCCCAGCTGCGCTTCATCCA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTCTGGGACAGCTTGTTaGTGTGGTACTGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACSGTAC*CGTAGR
Trigger: CCGCCCTGCAGTACCACATCAACAAGCTGTCCCAGA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCACGAGTCCAGCCACCTaGTGTGGAGCTGGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACTSPAT*CGAGSC
Trigger: ACAAGACCCAGCTCCACAGCAGGTGGCTGGACTCGT...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTTGTCCAGTGTCCAGTaGGTCTGCAGCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACLSSVQ*VCSSHC
Trigger: GCAGTGGCTGCTGCAGACCCACTGGACACTGGACAA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGGGGCTGGGAGAAGCTaGCACGGAGGCGCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSGAGRS*HGGAVR
Trigger: GCGCACTGCGCCTCCGTGCCAGCTTCTCCCAGCCCC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTCTGCCAGCGACAACTaGGCCACATTCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACSASDN*ATFWWA
Trigger: AGCCCACCAGAATGTGGCCCAGTTGTCGCTGGCAGA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGACAGCTCCTCGGGGTaGCGGATGCTGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSDSSSG*RMLRRR
Trigger: CCGCCTCCTCAGCATCCGGCACCCCGAGGAGCTGTC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGTCGGTTGTTGGCGATaGCCAGGATCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACVGCWR*PGSRLS
Trigger: GGAAAGACGAGATCCTGGGCATCGCCAACAACCGAC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGCCAGGTCCTTGGCCTaGACAAAGTCAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACARSLA*TKSVTA
Trigger: TGCTGTCACTGACTTTGTGCAGGCCAAGGACCTGGC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACCATGGTGCGGCCTTTaGAGGCCAGGCGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSPWCGL*RPGGSQ
Trigger: CTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGTTCATCAAACTCGATaGCCACCTGCCGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACVHQTR*PPAGCP
Trigger: GGGACATCCGGCAGGTGGCCATCGAGTTTGATGAAC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGCGCTGTCCGAGAAGTaGGCTGGCATCCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSALSEK*AGIPRN
Trigger: GTTCCGGGGGATGCCAGCTCACTTCTCGGACAGCGC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAAAAGGGGGCACCACATaGGCTCAGGGACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSKGGTT*AQGPPP
Trigger: GGGTGGGGGTCCCTGAGCTCATGTGGTGCCCCCTTT...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACATCCCCGCCATGGCTaGGGCTGCTGCTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSHPRHG*GCCFPG
Trigger: GCCAGGAAAGCAGCAGCCGCAGCCATGGCGGGGATG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACCGGAACAGTGCAGGTaGCACGCCCCCAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSPEQCR*HAPSQD
Trigger: GTCTTGGCTGGGGGCGTGGCACCTGCACTGTTCCGG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACACCCCTGTGGGCCGTaGGCTTCCTGCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSHPCGP*ASCPPF
Trigger: GAAAGGAGGGCAGGAAGCCCACGGCCCACAGGGGTG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGTCTTCCTTGTGTGCTaGGGGACTGCAGATAGGTCA +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACVFLVC*GTADRS
Trigger: TGACCTATCTGCAGTCCCCCAGCACACAAGGAAGAC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACACCCGCAGCTCCCATaGCGAGTCGATGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSHPQLP*RVDVVP
Trigger: GGGGACTACATCGACTCGTCATGGGAGCTGCGGGTG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGGCACGGAGGCGCAGTaGGCGGCGGTTGGGCAACCG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCGTEAQ*AAVGQP
Trigger: CGGTTGCCCAACCGCCGCGCACTGCGCCTCCGTGCC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCATACAGCGTCTGGCCCTaGCAGGTCCTTGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSYSVWP*QVLGLH
Trigger: GTGCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTA...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGAGGCATCAGGGCCGTaGGGGTGGTTGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCEASGP*GWLPGP
Trigger: GGGCCCGGGCAACCACCCCCACGGCCCTGATGCCTC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACCCCCATCCCTGGCCTaGGTGATGGTACAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSPPSLA*VMVQRL
Trigger: CAGACGCTGTACCATCACCCAGGCCAGGGATGGGGG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTCCTGTAGCTACATCTaGTCTTCCTTGTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACSCSYI*SSLCAG
Trigger: CCCAGCACACAAGGAAGACCAGATGTAGCTACAGGA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCTGCTTGCGATTGATCTaGTCCACAATCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACCLRLI*STIFRS
Trigger: GCTCCTGAAGATTGTGGAGCAGATCAATCGCAAGCA...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCCAGCCCTGGGTCTGTaGCAGCCGGCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCPALGL*QPAPPP
Trigger: AGGTGGGGGAGCCGGCTGGCACAGACCCAGGGCTGG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCGGGCTACACCCCTGTaGGCCGTGGGCTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCRATPL*AVGFLP
Trigger: GGGCAGGAAGCCCACGGCCCACAGGGGTGTAGCCCG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACGGCCGTGGCAGACGCTaGAGCAGGAGGGGGTCGGGT +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDGRGRR*SRRGSG
Trigger: ACCCGACCCCCTCCTGCTCCAGCGTCTGCCACGGCC...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACCCACCTCCCCGCTCTaGGACAGCTTGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSPTSPL*DSLLMW
Trigger: CCACATCAACAAGCTGTCCCAGAGCGGGGAGGTGGG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGTGGGCAACCGAAGGATaGCGGGCCGGTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGWATEG*RAGAGA
Trigger: GGCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCA...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCGAGGCCGTAGGGGTTaGGGCCCTCGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCRGRRG*GPRQRH
Trigger: ATGCCTCTGCCGAGGGCCTCAACCCCTACGGCCTCG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACCGAGGCCGTAGGGGTTaGGGCCCTCGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDRGRRG*GPRQRH
Trigger: ATGCCTCTGCCGAGGGCCTCAACCCCTACGGCCTCG...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACGCAAGGGCTGGGGGCTaGAGGTGGGTCTCGGGCTAC +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDARAGG*RWVSGY
Trigger: GTAGCCCGAGACCCACCTGCAGCCCCCAGCCCTTGC...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCAGCACCCCGCCGATGTaGGACTCCCCAGTGACCCGC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCSTPPM*DSPVTR
Trigger: GCGGGTCACTGGGGAGTCGCACATCGGCGGGGTGCT...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACAGCACCCCGCCGATGTaGGACTCCCCAGTGACCCGC +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDSTPPM*DSPVTR
Trigger: GCGGGTCACTGGGGAGTCGCACATCGGCGGGGTGCT...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACCATCCCCCGGAACAGTaGAGGTGCCACGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDHPPEQ*RCHAPS
Trigger: GCTGGGGGCGTGGCACCTGCACTGTTCCGGGGGATG...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCCACTGCCCGTGCGCTaGAGGCTGAGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCPLPVR*RLRKAR
Trigger: CCTGGCCTTCCTCAGCCTGCAGCGCACGGGCAGTGG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACCACGGCCAAGTCGATaGGGATCAGTCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSPRPSR*GSVGCW
Trigger: CCAACAACCGACTGATCCGCATCGACTTGGCCGTGG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACGCTGGGGGCTGCAGGTaGGTCTCGGGCTACACCCCT +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDAGGCR*VSGYTP
Trigger: AGGGGTGTAGCCCGAGACCCACCTGCAGCCCCCAGC...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCATTGTCCAGTGTCCAGTaGGTCTGCAGCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSLSSVQ*VCSSHC
Trigger: GCAGTGGCTGCTGCAGACCCACTGGACACTGGACAA...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGGGGCTGGGAGAAGCTaGCACGGAGGCGCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGGAGRS*HGGAVR
Trigger: GCGCACTGCGCCTCCGTGCCAGCTTCTCCCAGCCCC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCAGGTCGTCCAGCCCTaGGTCTGTGCCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCQVVQP*VCASRL
Trigger: GAGCCGGCTGGCACAGACCCAGGGCTGGACGACCTG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCCATGGTGCGGCCTTTaGAGGCCAGGCGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCPWCGL*RPGGSQ
Trigger: CTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCTGGAGCGGGTGTaGGGCAGTGAGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDCLERV*GSEPLW
Trigger: CCACAGGGGCTCACTGCCCCACACCCGCTCCAGGCA...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGAGCTGGGTCTTGTCTaGCAGGGAGCTGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCELGLV*QGAGPW
Trigger: CCACGGCCCAGCTCCCTGTCAGACAAGACCCAGCTC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAACAGTGTGGTCTCCTTaGACACCACCCAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSTVWSP*TPPSVG
Trigger: GCCAACACTGGGTGGTGTTCAAGGAGACCACACTGT...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCCGGAACAGTGCAGGTaGCACGCCCCCAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCPEQCR*HAPSQD
Trigger: GTCTTGGCTGGGGGCGTGGCACCTGCACTGTTCCGG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCATCCCCCGGAACAGTaGAGGTGCCACGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGHPPEQ*RCHAPS
Trigger: GCTGGGGGCGTGGCACCTGCACTGTTCCGGGGGATG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACGAAGCGCAGCCAGAGTaGGTCCCCGGCCTTGATGCC +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDEAQPE*VPGLDA
Trigger: GGCATCAAGGCCGGGGACGCACTCTGGCTGCGCTTC...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGCGCAGCTGGGCCTCTaGCAGCGACAACTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGAQLGL*QRQLGH
Trigger: GTGGCCCAGTTGTCGCTGGCAGAGGCCCAGCTGCGC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAAACTCGATGGCCACCTaGCGGATGTCCCAGTTGACA +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSNSMAT*RMSQLT
Trigger: TGTCAACTGGGACATCCGGCAGGTGGCCATCGAGTT...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGGATCAGTCGGTTGTTaGCGATGCCCAGGATCTCGT +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSGSVGC*RCPGSR
Trigger: ACGAGATCCTGGGCATCGCCAACAACCGACTGATCC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACCCTCAGAAGGCCTCATaGCCCCCGGTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDPQKAS*PPVSCR
Trigger: CCTGCAGCTCACCGGGGGCCATGAGGCCTTCTGAGG...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGACTGCCAGGCCTGGATaGAGCGCAGCTGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGTARPG*SAAGPL
Trigger: CAGAGGCCCAGCTGCGCTTCATCCAGGCCTGGCAGT...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGAAAGGGGGCACCACATaGGCTCAGGGACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGKGGTT*AQGPPP
Trigger: GGGTGGGGGTCCCTGAGCTCATGTGGTGCCCCCTTT...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCATGGCTGCGGCTGCTaGTTTCCTGGCAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCHGCGC*FPGKGW
Trigger: CCAGCCCTTGCCAGGAAAGCAGCAGCCGCAGCCATG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACAGGATGACGGGCCGGTaGTGGGGCCCAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDRMTGR*WGPKKR
Trigger: CCTCTTCTTTGGGCCCCAGCACCGGCCCGTCATCCT...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGCACGGAGGCGCAGTaGGCGGCGGTTGGGCAACCG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLGTEAQ*AAVGQP
Trigger: CGGTTGCCCAACCGCCGCGCACTGCGCCTCCGTGCC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGAAGCGCAGCCAGAGTaGGTCCCCGGCCTTGATGCC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGEAQPE*VPGLDA
Trigger: GGCATCAAGGCCGGGGACGCACTCTGGCTGCGCTTC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCATCATCTCCTCCTCGGTaGAGTCAATCTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSSSPPR*SQSPPA
Trigger: TGCTGGAGGAGATTGACTGCACCGAGGAGGAGATGA...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCCTCGCTGGTGTAGCTaGTGTCGGCCATGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGPRWCS*CRPWCG
Trigger: GCCGCACCATGGCCGACAGCAGCTACACCAGCGAGG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCAAGTCGGGCAGGGACTaGCAGGCCTGGATGAAGCGC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCKSGRD*QAWMKR
Trigger: GCGCTTCATCCAGGCCTGGCAGTCCCTGCCCGACTT...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCATGACGGGCCGGTGCTaGGGCCCAAAGAAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCMTGRC*GPKKRR
Trigger: ACGCCTCTTCTTTGGGCCCCAGCACCGGCCCGTCAT...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGAGGCATCAGGGCCGTaGGGGTGGTTGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLEASGP*GWLPGP
Trigger: GGGCCCGGGCAACCACCCCCACGGCCCTGATGCCTC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCCCCCATCCCTGGCCTaGGTGATGGTACAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCPPSLA*VMVQRL
Trigger: CAGACGCTGTACCATCACCCAGGCCAGGGATGGGGG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGTCTTCCTTGTGTGCTaGGGGACTGCAGATAGGTCA +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSVFLVC*GTADRS
Trigger: TGACCTATCTGCAGTCCCCCAGCACACAAGGAAGAC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCACCCGCAGCTCCCATaGCGAGTCGATGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGHPQLP*RVDVVP
Trigger: GGGGACTACATCGACTCGTCATGGGAGCTGCGGGTG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGTCAGTGACAGCAGGTaGAATGCCCAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCVSDSR*NAQLGA
Trigger: GGCACCCAGCTGGGCATTTCACCTGCTGTCACTGAC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCAAGAAAGAACTCGTTTaGAACCATGTTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: IPGLGDGTASGPARSLACKKELV*NHVSSS
Trigger: GGATGATGAAACATGGTTTCAAACGAGTTCTTTCTT...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCGGGCTACACCCCTGTaGGCCGTGGGCTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLRATPL*AVGFLP
Trigger: GGGCAGGAAGCCCACGGCCCACAGGGGTGTAGCCCG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGACCGACTCGGCCTCTaGGTCCTCCTCTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCDRLGL*VLLSHK
Trigger: TTTGTGGGAGAGGAGGACCCAGAGGCCGAGTCGGTC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGTCCGAGAAGTGAGCTaGCATCCCCCGGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCVREVS*HPPEQC
Trigger: GCACTGTTCCGGGGGATGCCAGCTCACTTCTCGGAC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACGTCCGAGAAGTGAGCTaGCATCCCCCGGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDVREVS*HPPEQC
Trigger: GCACTGTTCCGGGGGATGCCAGCTCACTTCTCGGAC...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACGAAAGATTCGGAGATaGTCCTTGAGCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSRKIRR*SLSSGM
Trigger: CATCCCAGAGCTCAAGGACCATCTCCGAATCTTTCG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGTGGCCTGCACCTCGCTaGTGTAGCTGCTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGWPAPR*CSCCRP
Trigger: TGGCCGACAGCAGCTACACCAGCGAGGTGCAGGCCA...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCTCTGGGACAGCTTGTTaGTGTGGTACTGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCSGTAC*CGTAGR
Trigger: CCGCCCTGCAGTACCACATCAACAAGCTGTCCCAGA...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGCTCTGGGATGGTGGTaGGGCTGTCCAGCACATCTG +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGALGWW*GCPAHL
Trigger: CAGATGTGCTGGACAGCCTCACCACCATCCCAGAGC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGTCAGTGACAGCAGGTaGAATGCCCAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGVSDSR*NAQLGA
Trigger: GGCACCCAGCTGGGCATTTCACCTGCTGTCACTGAC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGACAGCTCCTCGGGGTaGCGGATGCTGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLDSSSG*RMLRRR
Trigger: CCGCCTCCTCAGCATCCGGCACCCCGAGGAGCTGTC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCACGAGTCCAGCCACCTaGTGTGGAGCTGGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCTSPAT*CGAGSC
Trigger: ACAAGACCCAGCTCCACAGCAGGTGGCTGGACTCGT...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGCCTTGATGCCCTGCTaGATGAGACACCGCGACGAG +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGALMPC*MRHRDE
Trigger: CTCGTCGCGGTGTCTCATGCAGCAGGGCATCAAGGC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGCTTCACCTCCAGGTTaGTCAGGGCCACATCCAGGT +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCASPPG*SGPHPG
Trigger: ACCTGGATGTGGCCCTGAGCAACCTGGAGGTGAAGC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCCACTGCCCGTGCGCTaGAGGCTGAGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLPLPVR*RLRKAR
Trigger: CCTGGCCTTCCTCAGCCTGCAGCGCACGGGCAGTGG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCCACGGCCAAGTCGATaGGGATCAGTCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCPRPSR*GSVGCW
Trigger: CCAACAACCGACTGATCCGCATCGACTTGGCCGTGG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGTGGCCCCCGGTGAGCTaGAGGAAGAGGTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGWPPVS*RKRSSS
Trigger: GGATGAAGACCTCTTCCTGCAGCTCACCGGGGGCCA...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGTCTTCATCCCCGCCATaGCTGCGGCTGCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGSSSPP*LRLLLS
Trigger: GGAAAGCAGCAGCCGCAGCCATGGCGGGGATGAAGA...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACCACCTGCTGTGGAGCTaGGTCTTGTCTGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDHLLWS*VLSDRE
Trigger: CTCCCTGTCAGACAAGACCCAGCTCCACAGCAGGTG...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCTCCAGCCACCTGCTGTaGAGCTGGGTCTTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCSSHLL*SWVLSD
Trigger: GTCAGACAAGACCCAGCTCCACAGCAGGTGGCTGGA...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACCTTCCGGGGCCTTCGTaGGATGCGAAAGATTCGGAG +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDLPGPS*DAKDSE
Trigger: CTCCGAATCTTTCGCATCCCACGAAGGCCCCGGAAG...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279227.9
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCCATGGTGCGGCCTTTaGAGGCCAGGCGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLPWCGL*RPGGSQ
Trigger: CTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTGCCTGGAGCGGGTGTaGGGCAGTGAGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLCLERV*GSEPLW
Trigger: CCACAGGGGCTCACTGCCCCACACCCGCTCCAGGCA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGCGCTGTCCGAGAAGTaGGCTGGCATCCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLALSEK*AGIPRN
Trigger: GTTCCGGGGGATGCCAGCTCACTTCTCGGACAGCGC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGAGCTGGGTCTTGTCTaGCAGGGAGCTGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLELGLV*QGAGPW
Trigger: CCACGGCCCAGCTCCCTGTCAGACAAGACCCAGCTC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCACAGTGTGGTCTCCTTaGACACCACCCAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCTVWSP*TPPSVG
Trigger: GCCAACACTGGGTGGTGTTCAAGGAGACCACACTGT...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGACTGCCAGGCCTGGATaGAGCGCAGCTGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLTARPG*SAAGPL
Trigger: CAGAGGCCCAGCTGCGCTTCATCCAGGCCTGGCAGT...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACAGCCAAGACAACCTTaGTCAAGTCATAGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RGISLSHSDKERGHHMSSQPRQP*SSHRAL
Trigger: AAGAGCTCTATGACTTGAGCAAGGTTGTCTTGGCTG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCCTCGCTGGTGTAGCTaGTGTCGGCCATGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLPRWCS*CRPWCG
Trigger: GCCGCACCATGGCCGACAGCAGCTACACCAGCGAGG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGTCGGTTGTTGGCGATaGCCAGGATCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCVGCWR*PGSRLS
Trigger: GGAAAGACGAGATCCTGGGCATCGCCAACAACCGAC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCCACGGCCAAGTCGATaGGGATCAGTCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGPRPSR*GSVGCW
Trigger: CCAACAACCGACTGATCCGCATCGACTTGGCCGTGG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR GCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACAACTCGATGGCCACCTaGCGGATGTCCCAGTTGACA +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDNSMAT*RMSQLT
Trigger: TGTCAACTGGGACATCCGGCAGGTGGCCATCGAGTT...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGGATCAGTCGGTTGTTaGCGATGCCCAGGATCTCGT +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCGSVGC*RCPGSR
Trigger: ACGAGATCCTGGGCATCGCCAACAACCGACTGATCC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGTTCATCAAACTCGATaGCCACCTGCCGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCVHQTR*PPAGCP
Trigger: GGGACATCCGGCAGGTGGCCATCGAGTTTGATGAAC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCCTCAGAAGGCCTCATaGCCCCCGGTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLPQKAS*PPVSCR
Trigger: CCTGCAGCTCACCGGGGGCCATGAGGCCTTCTGAGG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCAGAAGCTGTAGTACTTaGAGCGCAGCCAGAGTGCGT +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCRSCST*SAARVR
Trigger: ACGCACTCTGGCTGCGCTTCAAGTACTACAGCTTCT...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCTTTCCTGCTGCCCTTaGACCTGCTTGGCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGLSCCP*TCLALN
Trigger: GTTCAAGGCCAAGCAGGTTCAAGGGCAGCAGGAAAG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545896.1
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCTGGTCTGACCAGTCCTaGTTGCGATTGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCWSDQS*LRLICS
Trigger: GGAGCAGATCAATCGCAAGCAGGACTGGTCAGACCA...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCCGGCCTTGATGCCCTaGTGCATGAGACACCGCGAC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLPALMP*CMRHRD
Trigger: GTCGCGGTGTCTCATGCAGCAGGGCATCAAGGCCGG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCTCATCTCCTCCTCGGTaGAGTCAATCTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCSSPPR*SQSPPA
Trigger: TGCTGGAGGAGATTGACTGCACCGAGGAGGAGATGA...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGAAGTCGGGCAGGGACTaGCAGGCCTGGATGAAGCGC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLKSGRD*QAWMKR
Trigger: GCGCTTCATCCAGGCCTGGCAGTCCCTGCCCGACTT...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGACAGCTTGTTGATGTaGTACTGCAGGGCGGCAAAC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCDSLLM*YCRAAN
Trigger: GTTTGCCGCCCTGCAGTACCACATCAACAAGCTGTC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTGGCCTGCACCTCGCTaGTGTAGCTGCTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLWPAPR*CSCCRP
Trigger: TGGCCGACAGCAGCTACACCAGCGAGGTGCAGGCCA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGGATCAGTCGGTTGTTaGCGATGCCCAGGATCTCGT +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGGSVGC*RCPGSR
Trigger: ACGAGATCCTGGGCATCGCCAACAACCGACTGATCC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGTCTTCCTTGTGTGCTaGGGGACTGCAGATAGGTCA +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCVFLVC*GTADRS
Trigger: TGACCTATCTGCAGTCCCCCAGCACACAAGGAAGAC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCCAAATAGCATGGTCTaGCCAGTCCTGCTTGCGATT +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCPNSMV*PVLLAI
Trigger: AATCGCAAGCAGGACTGGTCAGACCATGCTATTTGG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTGGCCCCCGGTGAGCTaGAGGAAGAGGTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLWPPVS*RKRSSS
Trigger: GGATGAAGACCTCTTCCTGCAGCTCACCGGGGGCCA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGCACGGGGTCTGTCTTaGGATCCAAATCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGARGLS*DPNRRS
Trigger: GCTTCTTCGATTTGGATCCCAAGACAGACCCCGTGC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCCCACCTCCCCGCTCTaGGACAGCTTGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLPTSPL*DSLLMW
Trigger: CCACATCAACAAGCTGTCCCAGAGCGGGGAGGTGGG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTGGATGAAGCGCAGCTaGGCCTCTGCCAGCGACAAC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLWMKRS*ASASDN
Trigger: GTTGTCGCTGGCAGAGGCCCAGCTGCGCTTCATCCA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTCCTGTAGCTACATCTaGTCTTCCTTGTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDSCSYI*SSLCAG
Trigger: CCCAGCACACAAGGAAGACCAGATGTAGCTACAGGA...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCTCCTGTAGCTACATCTaGTCTTCCTTGTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCSCSYI*SSLCAG
Trigger: CCCAGCACACAAGGAAGACCAGATGTAGCTACAGGA...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCCAAATAGCATGGTCTaGCCAGTCCTGCTTGCGATT +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGPNSMV*PVLLAI
Trigger: AATCGCAAGCAGGACTGGTCAGACCATGCTATTTGG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCTGCTTGCGATTGATCTaGTCCACAATCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCCLRLI*STIFRS
Trigger: GCTCCTGAAGATTGTGGAGCAGATCAATCGCAAGCA...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCACCTGCTGTGGAGCTaGGTCTTGTCTGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLHLLWS*VLSDRE
Trigger: CTCCCTGTCAGACAAGACCCAGCTCCACAGCAGGTG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTCCAGCCACCTGCTGTaGAGCTGGGTCTTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLSSHLL*SWVLSD
Trigger: GTCAGACAAGACCCAGCTCCACAGCAGGTGGCTGGA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTCTGCCAGCGACAACTaGGCCACATTCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLSASDN*ATFWWA
Trigger: AGCCCACCAGAATGTGGCCCAGTTGTCGCTGGCAGA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGAACCTGCTTGGCCTTaGACTTTCGCTGGAAACGGG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLEPAWP*TFAGNG
Trigger: CCCGTTTCCAGCGAAAGTTCAAGGCCAAGCAGGTTC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545896.1
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGCCAGGTCCTTGGCCTaGACAAAGTCAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLARSLA*TKSVTA
Trigger: TGCTGTCACTGACTTTGTGCAGGCCAAGGACCTGGC...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTTAATGCAGAACTTCTaGCCGGAGACGTTAACATCG +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDLMQNF*PETLTS
Trigger: CGATGTTAACGTCTCCGGCCAGAAGTTCTGCATTAA...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGAGAAGCTGTAGTACTTaGAGCGCAGCCAGAGTGCGT +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLRSCST*SAARVR
Trigger: ACGCACTCTGGCTGCGCTTCAAGTACTACAGCTTCT...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTGGTCTGACCAGTCCTaGTTGCGATTGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLWSDQS*LRLICS
Trigger: GGAGCAGATCAATCGCAAGCAGGACTGGTCAGACCA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR GCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCAGCCAAGACAACCTTaGTCAAGTCATAGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGQPRQP*SSHRAL
Trigger: AAGAGCTCTATGACTTGAGCAAGGTTGTCTTGGCTG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CCA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCGAAAGATTCGGAGATaGTCCTTGAGCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: FETMFHHPVATSGLPCVLRKIRR*SLSSGM
Trigger: CATCCCAGAGCTCAAGGACCATCTCCGAATCTTTCG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR TCA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACAAGAAAGAACTCGTTTaGAACCATGTTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDKKELV*NHVSSS
Trigger: GGATGATGAAACATGGTTTCAAACGAGTTCTTTCTT...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR TCA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGAAGAAAGAACTCGTTTaGAACCATGTTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGKKELV*NHVSSS
Trigger: GGATGATGAAACATGGTTTCAAACGAGTTCTTTCTT...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS TCA 90 bp AGCTGGCACGGAGGCGCAGTGCGCGGCGGTTGGGCAACCGAAGGATaGCGGGCCGGTGCTGGGGCCCAAAGAAGAGGCGTGCGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: SWHGGAVRGGWATEG*RAGAGAQRRGVRRP
Trigger: TGGCCGACGCACGCCTCTTCTTTGGGCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCGCCTCCGTGCCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 90 bp CACAGCCTGGAAGAGGGGCTGGGAGAAGCTGGCACGGAGGCGCAGTaGGCGGCGGTTGGGCAACCGAAGGATGACGGGCCGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HSLEEGLGEAGTEAQ*AAVGQPKDDGPVLG
Trigger: CCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCGCCTCCGTGCCAGCTTCTCCCAGCCCCTCTTCCAGGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS CCA 90 bp TGGAGCTGGGTCTTGTCTGACAGGGAGCTGGGCCGTGGCAGACGCTaGAGCAGGAGGGGGTCGGGTGGCGGCTGGGGCCGGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: WSWVLSDRELGRGRR*SRRGSGGGWGRLSM
Trigger: CATGCTGAGCCGGCCCCAGCCGCCACCCGACCCCCTCCTGCTCCAGCGTCTGCCACGGCCCAGCTCCCTGTCAGACAAGACCCAGCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 90 bp AGGCGCAGTGCGCGGCGGTTGGGCAACCGAAGGATGACGGGCCGGTaGTGGGGCCCAAAGAAGAGGCGTGCGTCGGCCAGGATCCCGTAC +
Preference number: 5 (lower is better)
Translates to: RRSARRLGNRRMTGR*WGPKKRRASARIPY
Trigger: GTACGGGATCCTGGCCGACGCACGCCTCTTCTTTGGGCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS CCA 90 bp CGCAGTGCGCGGCGGTTGGGCAACCGAAGGATGACGGGCCGGTGCTaGGGCCCAAAGAAGAGGCGTGCGTCGGCCAGGATCCCGTACTTG +
Preference number: 5 (lower is better)
Translates to: RSARRLGNRRMTGRC*GPKKRRASARIPYL
Trigger: CAAGTACGGGATCCTGGCCGACGCACGCCTCTTCTTTGGGCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS CCA 90 bp CCTGCACCTCGCTGGTGTAGCTGCTGTCGGCCATGGTGCGGCCTTTaGAGGCCAGGCGGCAGCCAGCCATCCAGCGGGCATACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PAPRWCSCCRPWCGL*RPGGSQPSSGHTAA
Trigger: AGCAGCAGTATGCCCGCTGGATGGCTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGGCCGACAGCAGCTACACCAGCGAGGTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541326.5
ENST00000545896.1
CDS CCA 90 bp CATGTGGTAGCAGGCCTCAGTCTGGGCGCTGTCCGAGAAGTGAGCTaGCATCCCCCGGAACAGTGCAGGTGCCACGCCCCCAGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: HVVAGLSLGAVREVS*HPPEQCRCHAPSQD
Trigger: GTCTTGGCTGGGGGCGTGGCACCTGCACTGTTCCGGGGGATGCCAGCTCACTTCTCGGACAGCGCCCAGACTGAGGCCTGCTACCACATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS CCA 90 bp GAGGCCAGGCGGCAGCCAGCCATCCAGCGGGCATACTGCTGCTCCTaGGCGAGAGGGGTGAGGGGGACAGTGCTAACCAAGCTTGATGCT +
Preference number: 5 (lower is better)
Translates to: EARRQPAIQRAYCCS*ARGVRGTVLTKLDA
Trigger: AGCATCAAGCTTGGTTAGCACTGTCCCCCTCACCCCTCTCGCCCAGGAGCAGCAGTATGCCCGCTGGATGGCTGGCTGCCGCCTGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541326.5
CDS GCA 90 bp TACTTGAAGCGCAGCCAGAGTGCGTCCCCGGCCTTGATGCCCTGCTaGATGAGACACCGCGACGAGTCCAGCCACCTGCTGTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: YLKRSQSASPALMPC*MRHRDESSHLLWSW
Trigger: CCAGCTCCACAGCAGGTGGCTGGACTCGTCGCGGTGTCTCATGCAGCAGGGCATCAAGGCCGGGGACGCACTCTGGCTGCGCTTCAAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 90 bp TTGCGATTGATCTGCTCCACAATCTTCAGGAGCACCCCGCCGATGTaGGACTCCCCAGTGACCCGCAGGGTGACCGACTCGGCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LRLICSTIFRSTPPM*DSPVTRRVTDSASG
Trigger: CCCAGAGGCCGAGTCGGTCACCCTGCGGGTCACTGGGGAGTCGCACATCGGCGGGGTGCTCCTGAAGATTGTGGAGCAGATCAATCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000544997.5
CDS GCA 90 bp TCCTCGGTGCAGTCAATCTCCTCCAGCAGCAGGTCCCACCGGGCCTaGTCATACAGCTGTGTCAGCCGCACGGGGTCTGTCTTGGGATCC +
Preference number: 5 (lower is better)
Translates to: SSVQSISSSSRSHRA*SYSCVSRTGSVLGS
Trigger: GGATCCCAAGACAGACCCCGTGCGGCTGACACAGCTGTATGAGCAGGCCCGGTGGGACCTGCTGCTGGAGGAGATTGACTGCACCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541326.5
ENST00000546255.1
CDS-3UTR CAA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGCCATGGTGCGGCCTTaGGAGGCCAGGCGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RGISLSHSDKERGHHMSSAMVRP*EARRQP
Trigger: TGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGGC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCATGCGGATCAGTCGGTaGTTGGCGATGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: IPGLGDGTASGPARSLACMRISR*LAMPRI
Trigger: GATCCTGGGCATCGCCAACAACCGACTGATCCGCAT...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCATTCGGAGATGGTCCTaGAGCTCTGGGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: IPGLGDGTASGPARSLACIRRWS*SSGMVV
Trigger: CACCACCATCCCAGAGCTCAAGGACCATCTCCGAAT...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp ATCCCTGGCCTGGGTGATGGTACAGCGTCTGGCCCTGCCAGGTCCTTGGCCTGCGACAGTGTGGTCTCCTaGAACACCACCCAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: IPGLGDGTASGPARSLACDSVVS*NTTQCW
Trigger: CCAACACTGGGTGGTGTTCAAGGAGACCACACTGTC...GCAGGCCAAGGACCTGGCAGGGCCAGACGCTGTACCATCACCCAGGCCAGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS GCA 90 bp AGTCTGGGCGCTGTCCGAGAAGTGAGCTGGCATCCCCCGGAACAGTaGAGGTGCCACGCCCCCAGCCAAGACAACCTTGCTCAAGTCATA +
Preference number: 5 (lower is better)
Translates to: SLGAVREVSWHPPEQ*RCHAPSQDNLAQVI
Trigger: TATGACTTGAGCAAGGTTGTCTTGGCTGGGGGCGTGGCACCTGCACTGTTCCGGGGGATGCCAGCTCACTTCTCGGACAGCGCCCAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 90 bp GGGATCCAAATCGAAGAAGCTGTAGTACTTGAAGCGCAGCCAGAGTaGGTCCCCGGCCTTGATGCCCTGCTGCATGAGACACCGCGACGA +
Preference number: 5 (lower is better)
Translates to: GIQIEEAVVLEAQPE*VPGLDALLHETPRR
Trigger: TCGTCGCGGTGTCTCATGCAGCAGGGCATCAAGGCCGGGGACGCACTCTGGCTGCGCTTCAAGTACTACAGCTTCTTCGATTTGGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000541326.5
ENST00000544997.5
CDS CCA 90 bp CTCCCTCCATATGCAGACCAACCCCTCCAGCAGGGCTGCCTACTCTaGCCCCCAACTCACCGAAAGATTCGGAGATGGTCCTTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LPPYADQPLQQGCLL*PPTHRKIRRWSLSS
Trigger: AGAGCTCAAGGACCATCTCCGAATCTTTCGGTGAGTTGGGGGCCAGAGTAGGCAGCCCTGCTGGAGGGGTTGGTCTGCATATGGAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546255.1
CDS-3UTR CAA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCAGAACACCACCCAGTGTaGGCGGTAGCCCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: RGISLSHSDKERGHHMSSEHHPV*AVALQG
Trigger: ACCCTGAAGGGCTACCGCCAACACTGGGTGGTGTTC...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCGCCATGGTGCGGCCTTaGGAGGCCAGGCGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCAMVRP*EARRQP
Trigger: TGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGGC...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCGCAGTGCGCGGCGGTaGGGCAACCGAAGGATGACG +
Preference number: 5 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCRSARR*GNRRMT
Trigger: CGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCGCAGTGCGCGGCGGTaGGGCAACCGAAGGATGACG +
Preference number: 5 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGRSARR*GNRRMT
Trigger: CGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACCTGAAACGCCAGGTCTaGACCACGTCGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDLKRQV*TTSPTA
Trigger: GGCCGTGGGCGACGTGGTCAAGACCTGGCGTTTCAG...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCATACATCTGGTCTTCCTaGTGTGCTGGGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: RGISLSHSDKERGHHMSSYIWSS*CAGGLQ
Trigger: CTGCAGTCCCCCAGCACACAAGGAAGACCAGATGTA...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCATCTGACCAGTCCTGCTaGCGATTGATCTGCTCCACA +
Preference number: 5 (lower is better)
Translates to: RGISLSHSDKERGHHMSSSDQSC*RLICST
Trigger: TGTGGAGCAGATCAATCGCAAGCAGGACTGGTCAGA...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCAGTGCGTCCCCGGCCTaGATGCCCTGCTGCATGAGA +
Preference number: 5 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCSASPA*MPCCMR
Trigger: TCTCATGCAGCAGGGCATCAAGGCCGGGGACGCACT...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGAGTGCGTCCCCGGCCTaGATGCCCTGCTGCATGAGA +
Preference number: 5 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGSASPA*MPCCMR
Trigger: TCTCATGCAGCAGGGCATCAAGGCCGGGGACGCACT...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCGGATCAGTCGGTTGTaGGCGATGCCCAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCRISRL*AMPRIS
Trigger: CGAGATCCTGGGCATCGCCAACAACCGACTGATCCG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS CCA 90 bp GCCCCCAGCCAAGACAACCTTGCTCAAGTCATAGAGCTCTTCCTCTaGCTCCTTCTCTTTCTTCTTCTTCTCCTTCTTCTCAGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: APSQDNLAQVIELFL*LLLFLLLLLLLRSP
Trigger: CGGGCTCCTGAGAAGAAGGAGAAGAAGAAGAAAGAGAAGGAGCCAGAGGAAGAGCTCTATGACTTGAGCAAGGTTGTCTTGGCTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS-3UTR CAA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCGGATCAGTCGGTTGTaGGCGATGCCCAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGRISRL*AMPRIS
Trigger: CGAGATCCTGGGCATCGCCAACAACCGACTGATCCG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCATGCGGATCAGTCGGTaGTTGGCGATGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCMRISR*LAMPRI
Trigger: GATCCTGGGCATCGCCAACAACCGACTGATCCGCAT...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACAGCTGAAGGCCACATaGATGTGTTCATCAAACTCG +
Preference number: 5 (lower is better)
Translates to: RGISLSHSDKERGHHMSSQLKAT*MCSSNS
Trigger: CGAGTTTGATGAACACATCAATGTGGCCTTCAGCTG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACCGCACGGGGTCTGTCTaGGGATCCAAATCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDRTGSV*GSKSKK
Trigger: CTTCTTCGATTTGGATCCCAAGACAGACCCCGTGCG...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGATGCGGATCAGTCGGTaGTTGGCGATGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGMRISR*LAMPRI
Trigger: GATCCTGGGCATCGCCAACAACCGACTGATCCGCAT...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCTGAAACGCCAGGTCTaGACCACGTCGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: FETMFHHPVATSGLPCVLLKRQV*TTSPTA
Trigger: GGCCGTGGGCGACGTGGTCAAGACCTGGCGTTTCAG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGCGCACGGGGTCTGTCTaGGGATCCAAATCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGRTGSV*GSKSKK
Trigger: CTTCTTCGATTTGGATCCCAAGACAGACCCCGTGCG...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACAGTGTGGTCTCCTaGAACACCACCCAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGDSVVS*NTTQCW
Trigger: CCAACACTGGGTGGTGTTCAAGGAGACCACACTGTC...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp ACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTCTTTCCTGCTGCCCTaGAACCTGCTTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: TMFHHPVATSGLPCVLGDSFLLP*NLLGLE
Trigger: TTCAAGGCCAAGCAGGTTCAAGGGCAGCAGGAAAGA...GTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545896.1
CDS-3UTR CAA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCAGTCCTGCTTGCGATaGATCTGCTCCACAATCTTC +
Preference number: 5 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCQSCLR*ICSTIF
Trigger: GAAGATTGTGGAGCAGATCAATCGCAAGCAGGACTG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp GAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGTCTGACCAGTCCTGCTaGCGATTGATCTGCTCCACA +
Preference number: 5 (lower is better)
Translates to: ETMFHHPVATSGLPCVLGSDQSC*RLICST
Trigger: TGTGGAGCAGATCAATCGCAAGCAGGACTGGTCAGA...CCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCAGCTGAAGGCCACATaGATGTGTTCATCAAACTCG +
Preference number: 5 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCQLKAT*MCSSNS
Trigger: CGAGTTTGATGAACACATCAATGTGGCCTTCAGCTG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp AGGGGTATCAGCCTCAGCCACTCAGACAAGGAAAGGGGGCACCACATGAGCTCACAAGAAAGAACTCGTTaGAAACCATGTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: RGISLSHSDKERGHHMSSQERTR*KPCFII
Trigger: GATGATGAAACATGGTTTCAAACGAGTTCTTTCTTG...TGAGCTCATGTGGTGCCCCCTTTCCTTGTCTGAGTGGCTGAGGCTGATACCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGATTCGGAGATGGTCCTaGAGCTCTGGGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: FETMFHHPVATSGLPCVLIRRWS*SSGMVV
Trigger: CACCACCATCCCAGAGCTCAAGGACCATCTCCGAAT...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279227.9
ENST00000345728.10
CDS-3UTR CAA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGTACATCTGGTCTTCCTaGTGTGCTGGGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: FETMFHHPVATSGLPCVLYIWSS*CAGGLQ
Trigger: CTGCAGTCCCCCAGCACACAAGGAAGACCAGATGTA...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp TTTGAAACCATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGCAGCTGAAGGCCACATaGATGTGTTCATCAAACTCG +
Preference number: 5 (lower is better)
Translates to: FETMFHHPVATSGLPCVLQLKAT*MCSSNS
Trigger: CGAGTTTGATGAACACATCAATGTGGCCTTCAGCTG...CAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACATGGTTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS-3UTR CAA 90 bp ATGTTTCATCATCCTGTAGCTACATCTGGTCTTCCTTGTGTGCTGGGGGACTGCCAAGAAAGAACTCGTTaGAAACCATGTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: MFHHPVATSGLPCVLGDCQERTR*KPCFII
Trigger: GATGATGAAACATGGTTTCAAACGAGTTCTTTCTTG...GCAGTCCCCCAGCACACAAGGAAGACCAGATGTAGCTACAGGATGATGAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS GCA 72 bp TGGGGGTGGTTGCCCGGGCCCCCACTGCCCGTGCGCTaGAGGCTGAGGAAGGCCAGGATGGCCTGCACCTCG +
Preference number: 6 (lower is better)
Translates to: WGWLPGPPLPVR*RLRKARMACTS
Trigger: CGAGGTGCAGGCCATCCTGGCCTTCCTCAGCCTGCAGCGCACGGGCAGTGGGGGCCCGGGCAACCACCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541326.5
ENST00000545896.1
CDS GCA 72 bp GCGCGGCGGTTGGGCAACCGAAGGATGACGGGCCGGTaGTGGGGCCCAAAGAAGAGGCGTGCGTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ARRLGNRRMTGR*WGPKKRRASAR
Trigger: CCTGGCCGACGCACGCCTCTTCTTTGGGCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS CAA 72 bp TGGGAGAAGCTGGCACGGAGGCGCAGTGCGCGGCGGTaGGGCAACCGAAGGATGACGGGCCGGTGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: WEKLARRRSARR*GNRRMTGRCWG
Trigger: GCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCGCCTCCGTGCCAGCTTCTCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS TCA 72 bp GGAGGCGCAGTGCGCGGCGGTTGGGCAACCGAAGGATaGCGGGCCGGTGCTGGGGCCCAAAGAAGAGGCGTG +
Preference number: 6 (lower is better)
Translates to: GGAVRGGWATEG*RAGAGAQRRGV
Trigger: CACGCCTCTTCTTTGGGCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCGCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 72 bp GAGGCCAGGCGGCAGCCAGCCATCCAGCGGGCATACTaGTGCTCCTGGGCGAGAGGGGTGAGGGGGACAGTG +
Preference number: 6 (lower is better)
Translates to: EARRQPAIQRAY*CSWARGVRGTV
Trigger: CACTGTCCCCCTCACCCCTCTCGCCCAGGAGCAGCAGTATGCCCGCTGGATGGCTGGCTGCCGCCTGGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541326.5
CDS CAA 90 bp AAGAGGGGCTGGGAGAAGCTGGCACGGAGGCGCAGTGCGCGGCGGTaGGGCAACCGAAGGATGACGGGCCGGTGCTGGGGCCCAAAGAAG +
Preference number: 6 (lower is better)
Translates to: KRGWEKLARRRSARR*GNRRMTGRCWGPKK
Trigger: CTTCTTTGGGCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCGCCTCCGTGCCAGCTTCTCCCAGCCCCTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 72 bp GGGCAGTGCCCACGTGGGGCCGCCAAGGTGCAGATCTaGACTGCGCCAGGCTGCAAGGTGGACATGGGCACC +
Preference number: 6 (lower is better)
Translates to: GQCPRGAAKVQI*TAPGCKVDMGT
Trigger: GGTGCCCATGTCCACCTTGCAGCCTGGCGCAGTGCAGATCTGCACCTTGGCGGCCCCACGTGGGCACTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540554.1
CDS GCA 72 bp GCCAGGCGGCAGCCAGCCATCCAGCGGGCATACTGCTaGTCCTGGGCGAGAGGGGTGAGGGGGACAGTGCTA +
Preference number: 6 (lower is better)
Translates to: ARRQPAIQRAYC*SWARGVRGTVL
Trigger: TAGCACTGTCCCCCTCACCCCTCTCGCCCAGGAGCAGCAGTATGCCCGCTGGATGGCTGGCTGCCGCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541326.5
CDS CCA 72 bp CGGCGGTTGGGCAACCGAAGGATGACGGGCCGGTGCTaGGGCCCAAAGAAGAGGCGTGCGTCGGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: RRLGNRRMTGRC*GPKKRRASARI
Trigger: GATCCTGGCCGACGCACGCCTCTTCTTTGGGCCCCAGCACCGGCCCGTCATCCTTCGGTTGCCCAACCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS CCA 72 bp CGCTGGTGTAGCTGCTGTCGGCCATGGTGCGGCCTTTaGAGGCCAGGCGGCAGCCAGCCATCCAGCGGGCAT +
Preference number: 6 (lower is better)
Translates to: RWCSCCRPWCGL*RPGGSQPSSGH
Trigger: ATGCCCGCTGGATGGCTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGGCCGACAGCAGCTACACCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541326.5
ENST00000545896.1
CDS CCA 72 bp TGGCCTGCACCTCGCTGGTGTAGCTGCTGTCGGCCATaGTGCGGCCTTTGGAGGCCAGGCGGCAGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: WPAPRWCSCCRP*CGLWRPGGSQP
Trigger: TGGCTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGGCCGACAGCAGCTACACCAGCGAGGTGCAGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541326.5
ENST00000545896.1
CDS GCA 72 bp CGCAGCCAGAGTGCGTCCCCGGCCTTGATGCCCTGCTaGATGAGACACCGCGACGAGTCCAGCCACCTGCTG +
Preference number: 6 (lower is better)
Translates to: RSQSASPALMPC*MRHRDESSHLL
Trigger: CAGCAGGTGGCTGGACTCGTCGCGGTGTCTCATGCAGCAGGGCATCAAGGCCGGGGACGCACTCTGGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 72 bp CTGGGAAGGGGCAGTGCCCACGTGGGGCCGCCAAGGTaGAGATCTGCACTGCGCCAGGCTGCAAGGTGGACA +
Preference number: 6 (lower is better)
Translates to: LGRGSAHVGPPR*RSALRQAARWT
Trigger: TGTCCACCTTGCAGCCTGGCGCAGTGCAGATCTGCACCTTGGCGGCCCCACGTGGGCACTGCCCCTTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540554.1
CDS GCA 72 bp AAGCGCAGCCAGAGTGCGTCCCCGGCCTTGATGCCCTaGTGCATGAGACACCGCGACGAGTCCAGCCACCTG +
Preference number: 6 (lower is better)
Translates to: KRSQSASPALMP*CMRHRDESSHL
Trigger: CAGGTGGCTGGACTCGTCGCGGTGTCTCATGCAGCAGGGCATCAAGGCCGGGGACGCACTCTGGCTGCGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 72 bp ATCTGCTCCACAATCTTCAGGAGCACCCCGCCGATGTaGGACTCCCCAGTGACCCGCAGGGTGACCGACTCG +
Preference number: 6 (lower is better)
Translates to: ICSTIFRSTPPM*DSPVTRRVTDS
Trigger: CGAGTCGGTCACCCTGCGGGTCACTGGGGAGTCGCACATCGGCGGGGTGCTCCTGAAGATTGTGGAGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000544997.5
CDS GCA 72 bp GCTGTCCGAGAAGTGAGCTGGCATCCCCCGGAACAGTaGAGGTGCCACGCCCCCAGCCAAGACAACCTTGCT +
Preference number: 6 (lower is better)
Translates to: AVREVSWHPPEQ*RCHAPSQDNLA
Trigger: AGCAAGGTTGTCTTGGCTGGGGGCGTGGCACCTGCACTGTTCCGGGGGATGCCAGCTCACTTCTCGGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 72 bp CAGTCAATCTCCTCCAGCAGCAGGTCCCACCGGGCCTaGTCATACAGCTGTGTCAGCCGCACGGGGTCTGTC +
Preference number: 6 (lower is better)
Translates to: QSISSSSRSHRA*SYSCVSRTGSV
Trigger: GACAGACCCCGTGCGGCTGACACAGCTGTATGAGCAGGCCCGGTGGGACCTGCTGCTGGAGGAGATTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541326.5
ENST00000544997.5
ENST00000546255.1
CDS GCA 72 bp CGAGAAGTGAGCTGGCATCCCCCGGAACAGTGCAGGTaGCACGCCCCCAGCCAAGACAACCTTGCTCAAGTC +
Preference number: 6 (lower is better)
Translates to: REVSWHPPEQCR*HAPSQDNLAQV
Trigger: GACTTGAGCAAGGTTGTCTTGGCTGGGGGCGTGGCACCTGCACTGTTCCGGGGGATGCCAGCTCACTTCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5
CDS GCA 72 bp CTCCCTCCATATGCAGACCAACCCCTCCAGCAGGGCTaGCTACTCTGGCCCCCAACTCACCGAAAGATTCGG +
Preference number: 6 (lower is better)
Translates to: LPPYADQPLQQG*LLWPPTHRKIR
Trigger: CCGAATCTTTCGGTGAGTTGGGGGCCAGAGTAGGCAGCCCTGCTGGAGGGGTTGGTCTGCATATGGAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546255.1
CDS CAA 72 bp ACGTCGCCCACGGCCAAGTCGATGCGGATCAGTCGGTaGTTGGCGATGCCCAGGATCTCGTCTTTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: TSPTAKSMRISR*LAMPRISSFLL
Trigger: CAGCAGGAAAGACGAGATCCTGGGCATCGCCAACAACCGACTGATCCGCATCGACTTGGCCGTGGGCGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS CAA 90 bp TTGACCACGTCGCCCACGGCCAAGTCGATGCGGATCAGTCGGTTGTaGGCGATGCCCAGGATCTCGTCTTTCCTGCTGCCCTTGAACCTG +
Preference number: 6 (lower is better)
Translates to: LTTSPTAKSMRISRL*AMPRISSFLLPLNL
Trigger: CAGGTTCAAGGGCAGCAGGAAAGACGAGATCCTGGGCATCGCCAACAACCGACTGATCCGCATCGACTTGGCCGTGGGCGACGTGGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS CAA 90 bp GTCTTGACCACGTCGCCCACGGCCAAGTCGATGCGGATCAGTCGGTaGTTGGCGATGCCCAGGATCTCGTCTTTCCTGCTGCCCTTGAAC +
Preference number: 6 (lower is better)
Translates to: VLTTSPTAKSMRISR*LAMPRISSFLLPLN
Trigger: GTTCAAGGGCAGCAGGAAAGACGAGATCCTGGGCATCGCCAACAACCGACTGATCCGCATCGACTTGGCCGTGGGCGACGTGGTCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000545896.1
CDS CCA 72 bp TATGCAGACCAACCCCTCCAGCAGGGCTGCCTACTCTaGCCCCCAACTCACCGAAAGATTCGGAGATGGTCC +
Preference number: 6 (lower is better)
Translates to: YADQPLQQGCLL*PPTHRKIRRWS
Trigger: GGACCATCTCCGAATCTTTCGGTGAGTTGGGGGCCAGAGTAGGCAGCCCTGCTGGAGGGGTTGGTCTGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546255.1
CDS GCA 72 bp ATCGAAGAAGCTGTAGTACTTGAAGCGCAGCCAGAGTaGGTCCCCGGCCTTGATGCCCTGCTGCATGAGACA +
Preference number: 6 (lower is better)
Translates to: IEEAVVLEAQPE*VPGLDALLHET
Trigger: TGTCTCATGCAGCAGGGCATCAAGGCCGGGGACGCACTCTGGCTGCGCTTCAAGTACTACAGCTTCTTCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000541326.5
ENST00000544997.5
CDS CCA 72 bp CAAGACAACCTTGCTCAAGTCATAGAGCTCTTCCTCTaGCTCCTTCTCTTTCTTCTTCTTCTCCTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: QDNLAQVIELFL*LLLFLLLLLLL
Trigger: GAGAAGAAGGAGAAGAAGAAGAAAGAGAAGGAGCCAGAGGAAGAGCTCTATGACTTGAGCAAGGTTGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279227.9
ENST00000345728.10
ENST00000541252.1
ENST00000544997.5