RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FERMT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000073712

Ensembl transcript IDs: ENST00000341590.8, ENST00000343279.8, ENST00000395631.6, ENST00000399304.7, ENST00000553373.5, ENST00000553663.5, ENST00000553768.1, ENST00000554152.5, ENST00000554288.1, ENST00000554712.5, ENST00000555546.5, ENST00000557255.1, ENST00000557562.1, ENST00000635305.1

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCTCTCCCTCGCACCCTTTTGGGCTATGTGAGCTAGGAATTTTCTaGCTAGCACCAATACAGATTGTAACAGCGCAACAGACTAGAACA +
Preference number: 1 (lower is better)
Translates to: TSPSHPFGLCELGIF*LAPIQIVTAQQTRT
Trigger: TGTTCTAGTCTGTTGCGCTGTTACAATCTGTATTGGTGCTAGTCAGAAAATTCCTAGCTCACATAGCCCAAAAGGGTGCGAGGGAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
3UTR TCA 90 bp ACAATACTGGTAATCCACCTCTCCCTCGCACCCTTTTGGGCTATGTaGGCTAGGAATTTTCTGACTAGCACCAATACAGATTGTAACAGC +
Preference number: 1 (lower is better)
Translates to: TILVIHLSLAPFWAM*ARNFLTSTNTDCNS
Trigger: GCTGTTACAATCTGTATTGGTGCTAGTCAGAAAATTCCTAGCTCACATAGCCCAAAAGGGTGCGAGGGAGAGGTGGATTACCAGTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
3UTR-3UTR GCA 90 bp CACTTTCACCTTCACATACTTCATGTTGGGAAGCTGCAGGCGGAGCAGTTTGTGCTGAAGCTTAGCATCTaGCTGAATACCATACTTATC +
Preference number: 2 (lower is better)
Translates to: HFHLHILHVGKLQAEQFVLKLSI*LNTILI
Trigger: GATAAGTATGGTATTCAGGCAGATGCTAAGCTTCAG...CACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTGAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557562.1
3UTR CAA 90 bp ACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTaGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAGGATAT +
Preference number: 2 (lower is better)
Translates to: TMTLLNIRPPACLIY*GVGGGIKWLPEVGY
Trigger: ATATCCTACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR GCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTATCAGGCCTCCTGCATaGCTGATTTATTTGGGGGTA +
Preference number: 2 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIIRPPA*LIYLGV
Trigger: TACCCCCAAATAAATCAGGCATGCAGGAGGCCTGAT...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR GCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAAAATATCAGGCCTCCTaGATGCCTGATTTATTTGGG +
Preference number: 2 (lower is better)
Translates to: TWPVQALELRTLWQIMIIKYQAS*MPDLFG
Trigger: CCCAAATAAATCAGGCATGCAGGAGGCCTGATATTT...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
3UTR-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGTGATGGTTTGTTCCTaGTTTGCCCACTATTTCAGT +
Preference number: 2 (lower is better)
Translates to: KVKHNDITKYQASCMPDLVMVCS*FAHYFS
Trigger: ACTGAAATAGTGGGCAAATCAGGAACAAACCATCAC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAGTGATGGTTTGTTCCTaGTTTGCCCACTATTTCAGT +
Preference number: 2 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQVMVCS*FAHYFS
Trigger: ACTGAAATAGTGGGCAAATCAGGAACAAACCATCAC...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR GCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAAAATATCAGGCCTCCTaGATGCCTGATTTATTTGGG +
Preference number: 2 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQKYQAS*MPDLFG
Trigger: CCCAAATAAATCAGGCATGCAGGAGGCCTGATATTT...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR TCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGGTGATGGTTTGTTCCTaGTTTGCCCACTATTTCAGT +
Preference number: 2 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLVMVCS*FAHYFS
Trigger: ACTGAAATAGTGGGCAAATCAGGAACAAACCATCAC...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR TCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTGATGGTTTGTTCCTaGTTTGCCCACTATTTCAGT +
Preference number: 2 (lower is better)
Translates to: VKHNDITKYQASCMPDLFVMVCS*FAHYFS
Trigger: ACTGAAATAGTGGGCAAATCAGGAACAAACCATCAC...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAAGTGCACATATTAACTaGTCTGGTAAGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQSAHIN*SGKAKK
Trigger: CTTCTTTGCCTTACCAGACCAGTTAATATGTGCACT...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR CCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTAGTGCACATATTAACTaGTCTGGTAAGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDISAHIN*SGKAKK
Trigger: CTTCTTTGCCTTACCAGACCAGTTAATATGTGCACT...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR GCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAAAATATCAGGCCTCCTaGATGCCTGATTTATTTGGG +
Preference number: 2 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQKYQAS*MPDLFG
Trigger: CCCAAATAAATCAGGCATGCAGGAGGCCTGATATTT...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR CCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTAGTGCACATATTAACTaGTCTGGTAAGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: VKHNDITKYQASCMPDLFSAHIN*SGKAKK
Trigger: CTTCTTTGCCTTACCAGACCAGTTAATATGTGCACT...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR CCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAAGTGCACATATTAACTaGTCTGGTAAGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVSAHIN*SGKAKK
Trigger: CTTCTTTGCCTTACCAGACCAGTTAATATGTGCACT...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR CCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAAGTGCACATATTAACTaGTCTGGTAAGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQSAHIN*SGKAKK
Trigger: CTTCTTTGCCTTACCAGACCAGTTAATATGTGCACT...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR TCA 72 bp GTAATCCACCTCTCCCTCGCACCCTTTTGGGCTATGTaGGCTAGGAATTTTCTGACTAGCACCAATACAGAT +
Preference number: 3 (lower is better)
Translates to: VIHLSLAPFWAM*ARNFLTSTNTD
Trigger: ATCTGTATTGGTGCTAGTCAGAAAATTCCTAGCTCACATAGCCCAAAAGGGTGCGAGGGAGAGGTGGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
3UTR CCA 72 bp CCAATACAGATTGTAACAGCGCAACAGACTAGAACATaGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGG +
Preference number: 3 (lower is better)
Translates to: PIQIVTAQQTRT*PVQALELRTLW
Trigger: CCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGTTCTAGTCTGTTGCGCTGTTACAATCTGTATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
3UTR GCA 72 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTaGATGCCTGATTTATTTGGGGGTAGGGGGAGGAAT +
Preference number: 3 (lower is better)
Translates to: VKHNDITKYQAS*MPDLFGGRGRN
Trigger: ATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR-3UTR CAA 90 bp GGATCTCTGGGTTTCTTTAAGAGAGAAAGTTCTTCGGGGTGTCTGATATTAAAAATGTCAGAAACAGCTTaGAAGACTCTATCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: GSLGFFKRESSSGCLILKMSETA*KTLSEK
Trigger: TTTCTCTGATAGAGTCTTCAAAGCTGTTTCTGACAT...TTTTAATATCAGACACCCCGAAGAACTTTCTCTCTTAAAGAAACCCAGAGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR TCA 90 bp CACCTTCACATACTTCATGTTGGGAAGCTGCAGGCGGAGCAGTTTGTGCTGAGGAGACACAGCGCGGGCTaGCTCCCCGTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HLHILHVGKLQAEQFVLRRHSAG*LPVPLP
Trigger: GGGGAGGGGAACGGGGAGTCAGCCCGCGCTGTGTCT...CCTCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR CCA 90 bp CACCTTCACATACTTCATGTTGGGAAGCTGCAGGCGGAGCAGTTTGTGCTGAGGTCCCGTCCAGAGCCATaGCTCCTTCCTGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: HLHILHVGKLQAEQFVLRSRPEP*LLPAGR
Trigger: CCGGCCGGCAGGAAGGAGCCATGGCTCTGGACGGGA...CCTCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR TCA 90 bp CCTTCACATACTTCATGTTGGGAAGCTGCAGGCGGAGCAGTTTGTGCTGAGGGGCGGTCACTCTCAGGGTaGCATCGCGGTTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: PSHTSCWEAAGGAVCAEGRSLSG*HRGSGP
Trigger: CGGACCTGAACCGCGATGTCACCCTGAGAGTGACCG...CCCCTCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR CCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACGCGTAGCAGCCATCTaGCATCCTTATCCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLRVAAI*HPYPVQ
Trigger: CTGGACGGGATAAGGATGCCAGATGGCTGCTACGCG...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAAGACACAGCGCGGGCTaGCTCCCCGTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLRHSAG*LPVPLP
Trigger: GGGGAGGGGAACGGGGAGTCAGCCCGCGCTGTGTCT...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395631.6
CDS-3UTR GCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAATCACGCCTCCAATGTaGACCTCGCCGGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVITPPM*TSPVTL
Trigger: GAGAGTGACCGGCGAGGTGCACATTGGAGGCGTGAT...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR CCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATCCCGTCCAGAGCCATaGCTCCTTCCGCGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTSRPEP*LLPRAP
Trigger: AGGAGCGCGCGGAAGGAGCCATGGCTCTGGACGGGA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341590.8
ENST00000343279.8
CDS-3UTR CCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTATCTCTTCCAGGAGAATaGCCCATTTGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLSLPGE*PIWPAR
Trigger: ACGAGCAGGCCAAATGGGCCATTCTCCTGGAAGAGA...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTCCCGTCCAGAGCCATaGCTCCTTCCTGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDISRPEP*LLPAGR
Trigger: CCGGCCGGCAGGAAGGAGCCATGGCTCTGGACGGGA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395631.6
CDS-3UTR TCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACACGGTCACTCTCAGGGTaGCATCGCGGTTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTRSLSG*HRGSGP
Trigger: CGGACCTGAACCGCGATGTCACCCTGAGAGTGACCG...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR GCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTACGGCTGGCGAAGCGCTaGCTGTGGCCGGAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVRLAKR*LWPERL
Trigger: TAGCCGCTCCGGCCACAGGCAGCGCTTCGCCAGCCG...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341590.8
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATCCCGTCCAGAGCCATaGCTCCTTCCGCGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQSRPEP*LLPRAP
Trigger: AGGAGCGCGCGGAAGGAGCCATGGCTCTGGACGGGA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341590.8
ENST00000343279.8
CDS-3UTR CCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTATCACATACTTCATGTTaGGAAGCTGCAGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLSHTSC*EAAGGA
Trigger: TGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGA...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTCGGTCACTCTCAGGGTaGCATCGCGGTTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIRSLSG*HRGSGP
Trigger: CGGACCTGAACCGCGATGTCACCCTGAGAGTGACCG...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGGTGACGTGATTGGTTaGCTGACAGCAAGTATACCA +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLGDVIG*LTASIP
Trigger: TGGTATACTTGCTGTCAGTCAACCAATCACGTCACC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAAAGAACATCAGTGCCTaGTCCAGGAGTGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLKNISA*SRSDKR
Trigger: CCTCTTATCACTCCTGGATCAGGCACTGATGTTCTT...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTATGTCCGCCATGGTCTTaGCTTTGGAGGCTAATCTGC +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVCPPWS*LWRLIC
Trigger: GCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACA...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAATCAGGCCTCCTGCATaGCTGATTTATTTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLIRPPA*LIYLGV
Trigger: TACCCCCAAATAAATCAGGCATGCAGGAGGCCTGAT...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGTCCGGTTCCTCGGCTaGCGAAGCGCTGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQVRFLG*RSAACG
Trigger: GCCACAGGCAGCGCTTCGCCAGCCGAGGAACCGGAC...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341590.8
CDS-3UTR CCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTATCTCTTCCAGGAGAATaGCCCATTTGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVSLPGE*PIWPAR
Trigger: ACGAGCAGGCCAAATGGGCCATTCTCCTGGAAGAGA...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGTTCATCTGATGAGCTaGTGTGCCACTGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLVHLMS*CATGFF
Trigger: GAAGAATCCAGTGGCACACCAGCTCATCAGATGAAC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTACCATGGTCTTGCCTTTaGAGGCTAATCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVPWSCL*RLICRL
Trigger: CAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGG...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTATTCCATGAGAGATCTTaGGGAATCAAGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLFHERS*GIKPSL
Trigger: CAAGGATGGCTTGATTCCTCAAGATCTCTCATGGAA...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAAAAAGCTGTAATACTTaGATCGGAGCAGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLKSCNT*IGAARP
Trigger: AGGCCTTGCTGCTCCGATTCAAGTATTACAGCTTTT...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGTCTTTTGCACGTGTTaGGAGAAATATGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLVFCTC*EKYVAT
Trigger: GGTGGCTACATATTTCTCTCAACACGTGCAAAAGAC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCCTTTTGGGCTATGTaGGCTAGGAATTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLPFWAM*ARNFLT
Trigger: AGTCAGAAAATTCCTAGCTCACATAGCCCAAAAGGG...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGGCTGCCATCCAGTGTaGATACTGTTTTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLGCHPV*ILFFIV
Trigger: GACAATGAAAAACAGTATGCACACTGGATGGCAGCC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAGGAGAATGGCCCATTTaGCCTGCTCGTAAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVGEWPI*PARKAD
Trigger: ATCAGCTTTACGAGCAGGCCAAATGGGCCATTCTCC...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGAGCTGGTGTGCCACTaGATTCTTCTTTGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLELVCH*ILLCSY
Trigger: ATAAGAGCAAAGAAGAATCCAGTGGCACACCAGCTC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAACCAGGATTGCCTTCTaGCAAAGCACTGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVTRIAF*QSTVTK
Trigger: TTTGGTGACAGTGCTTTGTCAGAAGGCAATCCTGGT...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAAGTAATCTCCAGGTCTaGAAGGGCAGCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVSNLQV*KGSINF
Trigger: GAAGTTGATGCTGCCCTTTCAGACCTGGAGATTACT...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp GGATCTCTGGGTTTCTTTAAGAGAGAAAGTTCTTCGGGGTGTCTGATATTAAAAATCACGCCTCCAATGTaGACCTCGCCGGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: GSLGFFKRESSSGCLILKITPPM*TSPVTL
Trigger: GAGAGTGACCGGCGAGGTGCACATTGGAGGCGTGAT...TTTTAATATCAGACACCCCGAAGAACTTTCTCTCTTAAAGAAACCCAGAGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR GCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACAAGTATACCAGGATTaGCTTCTGACAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLQVYQD*LLTKHC
Trigger: ACAGTGCTTTGTCAGAAGGCAATCCTGGTATACTTG...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGCCAGATTTCATTCATaGCTTCTGCAACTGGAATCA +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLARFHS*LLQLES
Trigger: TGATTCCAGTTGCAGAAGGCATGAATGAAATCTGGC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATATTCAGGTCCGTCACATaGACACTCAGTTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIFRSVT*TLSSHV
Trigger: GACGTGGGAACTGAGTGTCCATGTGACGGACCTGAA...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR CCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAGTTCATCTGATGAGCTaGTGTGCCACTGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVVHLMS*CATGFF
Trigger: GAAGAATCCAGTGGCACACCAGCTCATCAGATGAAC...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTCCAAGCAGAAGTTGGTaGCAAGGGGCTTCCATCATG +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPPSRSW*QGASIM
Trigger: CATGATGGAAGCCCCTTGTCACCAACTTCTGCTTGG...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGAAGAGCTTGAGGCTTaGACATTTTTGCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLEELEA*TFLPRF
Trigger: AAATCTTGGCAAAAATGTTCAAGCCTCAAGCTCTTC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTATTATCAAGAAGAGCTTaGGGCTTGAACATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLLSRRA*GLNIFA
Trigger: GGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAA...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGAGTTATATCAGTCGTaGTCTGCTCTGGTATTAACT +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLELYQS*SALVLT
Trigger: AGTTAATACCAGAGCAGATCACGACTGATATAACTC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTATCACGCCTCCAATGTaGACCTCGCCGGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFITPPM*TSPVTL
Trigger: GAGAGTGACCGGCGAGGTGCACATTGGAGGCGTGAT...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR GCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACTGAAGCTTAGCATCTaGCTGAATACCATACTTATC +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLLKLSI*LNTILI
Trigger: GATAAGTATGGTATTCAGGCAGATGCTAAGCTTCAG...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACAGCCCCCTTGGAACCTTaGAATGAAGTGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTAPLEP*NEVSDA
Trigger: GGCATCACTCACTTCATTGCAAGGTTCCAAGGGGGC...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAACGCCATGTTTTAATTaGATCTCCAGTGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVTPCFN*ISSAGI
Trigger: GATGCCAGCACTGGAGATGCAATTAAAACATGGCGT...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp TCTATCAGAGAAATTCACTTTCACCTTCACATACTTCATGTTGGGAAGCTGCAGTTCAGGTCCGTCACATaGACACTCAGTTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: SIREIHFHLHILHVGKLQFRSVT*TLSSHV
Trigger: GACGTGGGAACTGAGTGTCCATGTGACGGACCTGAA...CTGCAGCTTCCCAACATGAAGTATGTGAAGGTGAAAGTGAATTTCTCTGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR CCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATATCACATACTTCATGTTaGGAAGCTGCAGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIISHTSC*EAAGGA
Trigger: TGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGA...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTCCAAGCAGAAGTTGGTaGCAAGGGGCTTCCATCATG +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIPSRSW*QGASIM
Trigger: CATGATGGAAGCCCCTTGTCACCAACTTCTGCTTGG...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAGGTGACGTGATTGGTTaGCTGACAGCAAGTATACCA +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIGDVIG*LTASIP
Trigger: TGGTATACTTGCTGTCAGTCAACCAATCACGTCACC...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACTACTTCAGTACAAATaGAGGACAATCGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLLLQYK*RTIVLH
Trigger: ATGAAGTACGATTGTCCTTCATTTGTACTGAAGTAG...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAGTGATGGTTTGTTCCTaGTTTGCCCACTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVVMVCS*FAHYFS
Trigger: ACTGAAATAGTGGGCAAATCAGGAACAAACCATCAC...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAATCACGCCTCCAATGTaGACCTCGCCGGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVITPPM*TSPVTL
Trigger: GAGAGTGACCGGCGAGGTGCACATTGGAGGCGTGAT...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR GCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTACAAGTATACCAGGATTaGCTTCTGACAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVQVYQD*LLTKHC
Trigger: ACAGTGCTTTGTCAGAAGGCAATCCTGGTATACTTG...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTATCATTTCTTCTTCTGTaGATTCAATCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLSFLLL*IQSLPG
Trigger: TCCTGGAAGAGATTGAATGCACAGAAGAAGAAATGA...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATGTCCGCCATGGTCTTaGCTTTGGAGGCTAATCTGC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLCPPWS*LWRLIC
Trigger: GCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACA...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTGCCCCCTTGGAACCTTaGAATGAAGTGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIAPLEP*NEVSDA
Trigger: GGCATCACTCACTTCATTGCAAGGTTCCAAGGGGGC...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGCCCCCTTGGAACCTTaGAATGAAGTGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLAPLEP*NEVSDA
Trigger: GGCATCACTCACTTCATTGCAAGGTTCCAAGGGGGC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTACAATCGTACTTCATCTaGAAACTCTACGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVQSYFI*KLYGDH
Trigger: ATGGTCACCGTAGAGTTTGCAGATGAAGTACGATTG...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAACGCGTAGCAGCCATCTaGCATCCTTATCCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQRVAAI*HPYPVQ
Trigger: CTGGACGGGATAAGGATGCCAGATGGCTGCTACGCG...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATTCAGGTCCGTCACATaGACACTCAGTTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQFRSVT*TLSSHV
Trigger: GACGTGGGAACTGAGTGTCCATGTGACGGACCTGAA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR CCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACAGGAGAATGGCCCATTTaGCCTGCTCGTAAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTGEWPI*PARKAD
Trigger: ATCAGCTTTACGAGCAGGCCAAATGGGCCATTCTCC...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATCTCTTCCAGGAGAATaGCCCATTTGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLSLPGE*PIWPAR
Trigger: ACGAGCAGGCCAAATGGGCCATTCTCCTGGAAGAGA...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATCTCTTCCAGGAGAATaGCCCATTTGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQSLPGE*PIWPAR
Trigger: ACGAGCAGGCCAAATGGGCCATTCTCCTGGAAGAGA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTACCATGGTCTTGCCTTTaGAGGCTAATCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLPWSCL*RLICRL
Trigger: CAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGG...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAACCATGGTCTTGCCTTTaGAGGCTAATCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQPWSCL*RLICRL
Trigger: CAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGG...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGAACTGTCCGCCATaGTCTTGCCTTTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPKNCPP*SCLWRL
Trigger: TAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTT...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTTTGCATCTCCAGTGCTaGCATCCATCCGAATCAGTC +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPLHLQC*HPSESV
Trigger: GACTGATTCGGATGGATGCCAGCACTGGAGATGCAA...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
3UTR CAA 72 bp TTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTaGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAA +
Preference number: 4 (lower is better)
Translates to: LLNIRPPACLIY*GVGGGIKWLPE
Trigger: TTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGGTGACGTGATTGGTTaGCTGACAGCAAGTATACCA +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPGDVIG*LTASIP
Trigger: TGGTATACTTGCTGTCAGTCAACCAATCACGTCACC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATGCCAAGATTTCTGGTaGCGTGATTGGTTGACTGAC +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTCQDFW*RDWLTD
Trigger: GTCAGTCAACCAATCACGTCACCAGAAATCTTGGCA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAAAAAGCTGTAATACTTaGATCGGAGCAGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIKSCNT*IGAARP
Trigger: AGGCCTTGCTGCTCCGATTCAAGTATTACAGCTTTT...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAGTAATCTCCAGGTCTaGAAGGGCAGCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPSNLQV*KGSINF
Trigger: GAAGTTGATGCTGCCCTTTCAGACCTGGAGATTACT...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTACCACCAATGAATTCATaGACCACTTTGCAATCTACT +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVPPMNS*TTLQST
Trigger: AGTAGATTGCAAAGTGGTTCATGAATTCATTGGTGG...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTACTGAAGCTTAGCATCTaGCTGAATACCATACTTATC +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVLKLSI*LNTILI
Trigger: GATAAGTATGGTATTCAGGCAGATGCTAAGCTTCAG...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAATGATACTGCAGGGCTaGAAACATCATCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVMILQG*KHHHFF
Trigger: GAAGAAATGATGATGTTTGCAGCCCTGCAGTATCAT...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATCTGATGAGCTGGTGTaGCACTGGATTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTSDELV*HWILLC
Trigger: GCAAAGAAGAATCCAGTGGCACACCAGCTCATCAGA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTGTCCGCCATGGTCTTaGCTTTGGAGGCTAATCTGC +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLCPPWS*LWRLIC
Trigger: GCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTTGTCCGCCATGGTCTTaGCTTTGGAGGCTAATCTGC +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFCPPWS*LWRLIC
Trigger: GCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACA...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGGCCCCCTTGGAACCTTaGAATGAAGTGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLAPLEP*NEVSDA
Trigger: GGCATCACTCACTTCATTGCAAGGTTCCAAGGGGGC...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AATAGTCAACCATGGTCTGTCTGTACTTTAAGAGGTGGTGGTACAAATAATCATGCCCCCTTGGAACCTTaGAATGAAGTGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: NSQPWSVCTLRGGGTNNHAPLEP*NEVSDA
Trigger: GGCATCACTCACTTCATTGCAAGGTTCCAAGGGGGC...ATGATTATTTGTACCACCACCTCTTAAAGTACAGACAGACCATGGTTGACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553663.5
CDS-3UTR CCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTTCAGGTCCGTCACATaGACACTCAGTTCCCACGTC +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLFRSVT*TLSSHV
Trigger: GACGTGGGAACTGAGTGTCCATGTGACGGACCTGAA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATCACATACTTCATGTTaGGAAGCTGCAGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQSHTSC*EAAGGA
Trigger: TGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGGAGAATGGCCCATTTaGCCTGCTCGTAAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLGEWPI*PARKAD
Trigger: ATCAGCTTTACGAGCAGGCCAAATGGGCCATTCTCC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAGGAGAATGGCCCATTTaGCCTGCTCGTAAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQGEWPI*PARKAD
Trigger: ATCAGCTTTACGAGCAGGCCAAATGGGCCATTCTCC...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGTTCATCTGATGAGCTaGTGTGCCACTGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPVHLMS*CATGFF
Trigger: GAAGAATCCAGTGGCACACCAGCTCATCAGATGAAC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTCCATGGTCTTGCCTTTaGAGGCTAATCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFPWSCL*RLICRL
Trigger: CAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGG...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAAAGAACTGTCCGCCATaGTCTTGCCTTTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQKNCPP*SCLWRL
Trigger: TAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTT...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAAAGAACTGTCCGCCATaGTCTTGCCTTTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLKNCPP*SCLWRL
Trigger: TAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTT...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATTGCATCTCCAGTGCTaGCATCCATCCGAATCAGTC +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQLHLQC*HPSESV
Trigger: GACTGATTCGGATGGATGCCAGCACTGGAGATGCAA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACACAACAGACTAGAACATaGCCAGTCCAGGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTQQTRT*PVQALE
Trigger: CTCTAATGCCTGGACTGGCCATGTTCTAGTCTGTTG...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACCAGGATTGCCTTCTaGCAAAGCACTGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQTRIAF*QSTVTK
Trigger: TTTGGTGACAGTGCTTTGTCAGAAGGCAATCCTGGT...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAACCAGGATTGCCTTCTaGCAAAGCACTGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLTRIAF*QSTVTK
Trigger: TTTGGTGACAGTGCTTTGTCAGAAGGCAATCCTGGT...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATGCCAAGATTTCTGGTaGCGTGATTGGTTGACTGAC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLCQDFW*RDWLTD
Trigger: GTCAGTCAACCAATCACGTCACCAGAAATCTTGGCA...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTGCCAAGATTTCTGGTaGCGTGATTGGTTGACTGAC +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDICQDFW*RDWLTD
Trigger: GTCAGTCAACCAATCACGTCACCAGAAATCTTGGCA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTTTCCATGAGAGATCTTaGGGAATCAAGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPFHERS*GIKPSL
Trigger: CAAGGATGGCTTGATTCCTCAAGATCTCTCATGGAA...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATTCCATGAGAGATCTTaGGGAATCAAGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTFHERS*GIKPSL
Trigger: CAAGGATGGCTTGATTCCTCAAGATCTCTCATGGAA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAAGTAATCTCCAGGTCTaGAAGGGCAGCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLSNLQV*KGSINF
Trigger: GAAGTTGATGCTGCCCTTTCAGACCTGGAGATTACT...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAAGTAATCTCCAGGTCTaGAAGGGCAGCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQSNLQV*KGSINF
Trigger: GAAGTTGATGCTGCCCTTTCAGACCTGGAGATTACT...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAGTTAAATTTTTGGCCTaGAATGTTTACATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVVKFLA*NVYIWG
Trigger: ACCCCAGATGTAAACATTTCAGGCCAAAAATTTAAC...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATATGCTCTGGTATTAACTaGGGATCTGGGTTTAAATGC +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIICSGIN*GSGFKC
Trigger: GCATTTAAACCCAGATCCTCAGTTAATACCAGAGCA...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAGTGATGGTTTGTTCCTaGTTTGCCCACTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIVMVCS*FAHYFS
Trigger: ACTGAAATAGTGGGCAAATCAGGAACAAACCATCAC...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATCTGATGAGCTGGTGTaGCACTGGATTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQSDELV*HWILLC
Trigger: GCAAAGAAGAATCCAGTGGCACACCAGCTCATCAGA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACAGGCTGCCATCCAGTGTaGATACTGTTTTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTGCHPV*ILFFIV
Trigger: GACAATGAAAAACAGTATGCACACTGGATGGCAGCC...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGGCTGCCATCCAGTGTaGATACTGTTTTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPGCHPV*ILFFIV
Trigger: GACAATGAAAAACAGTATGCACACTGGATGGCAGCC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTATGTCCGCCATGGTCTTaGCTTTGGAGGCTAATCTGC +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVCPPWS*LWRLIC
Trigger: GCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACA...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTTCACATACTTCATGTTaGGAAGCTGCAGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFSHTSC*EAAGGA
Trigger: TGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGA...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp CTTACAGATGTCAGAAACAGCTTTGAAGACTCTATCAGAGAAATTCACTTTCACTCACATACTTCATGTTaGGAAGCTGCAGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: LTDVRNSFEDSIREIHFHSHTSC*EAAGGA
Trigger: TGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGA...GTGAAAGTGAATTTCTCTGATAGAGTCTTCAAAGCTGTTTCTGACATCTGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR CCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGGGAGAATGGCCCATTTaGCCTGCTCGTAAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLGEWPI*PARKAD
Trigger: ATCAGCTTTACGAGCAGGCCAAATGGGCCATTCTCC...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAATCTCTTCCAGGAGAATaGCCCATTTGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQSLPGE*PIWPAR
Trigger: ACGAGCAGGCCAAATGGGCCATTCTCCTGGAAGAGA...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACAGAGCTGGTGTGCCACTaGATTCTTCTTTGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTELVCH*ILLCSY
Trigger: ATAAGAGCAAAGAAGAATCCAGTGGCACACCAGCTC...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AATAGTCAACCATGGTCTGTCTGTACTTTAAGAGGTGGTGGTACAAATAATCATTTGCATCTCCAGTGCTaGCATCCATCCGAATCAGTC +
Preference number: 4 (lower is better)
Translates to: NSQPWSVCTLRGGGTNNHLHLQC*HPSESV
Trigger: GACTGATTCGGATGGATGCCAGCACTGGAGATGCAA...ATGATTATTTGTACCACCACCTCTTAAAGTACAGACAGACCATGGTTGACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553663.5
CDS-3UTR CCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTTTGCATCTCCAGTGCTaGCATCCATCCGAATCAGTC +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFLHLQC*HPSESV
Trigger: GACTGATTCGGATGGATGCCAGCACTGGAGATGCAA...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAACAACAGACTAGAACATaGCCAGTCCAGGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQQQTRT*PVQALE
Trigger: CTCTAATGCCTGGACTGGCCATGTTCTAGTCTGTTG...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTACAACAGACTAGAACATaGCCAGTCCAGGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLQQTRT*PVQALE
Trigger: CTCTAATGCCTGGACTGGCCATGTTCTAGTCTGTTG...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTCAACAGACTAGAACATaGCCAGTCCAGGCATTAGAG +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIQQTRT*PVQALE
Trigger: CTCTAATGCCTGGACTGGCCATGTTCTAGTCTGTTG...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAGAAGAGCTTGAGGCTTaGACATTTTTGCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIEELEA*TFLPRF
Trigger: AAATCTTGGCAAAAATGTTCAAGCCTCAAGCTCTTC...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTTCCATGAGAGATCTTaGGGAATCAAGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIFHERS*GIKPSL
Trigger: CAAGGATGGCTTGATTCCTCAAGATCTCTCATGGAA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATGCTCTGGTATTAACTaGGGATCTGGGTTTAAATGC +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTCSGIN*GSGFKC
Trigger: GCATTTAAACCCAGATCCTCAGTTAATACCAGAGCA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAGAGTTATATCAGTCGTaGTCTGCTCTGGTATTAACT +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIELYQS*SALVLT
Trigger: AGTTAATACCAGAGCAGATCACGACTGATATAACTC...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACAAACCTTGCAATGAAGTaGGTGATGCCAAATTCAGGT +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTNLAMK*VMPNSG
Trigger: ACCTGAATTTGGCATCACTCACTTCATTGCAAGGTT...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAACCTTGCAATGAAGTaGGTGATGCCAAATTCAGGT +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPNLAMK*VMPNSG
Trigger: ACCTGAATTTGGCATCACTCACTTCATTGCAAGGTT...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAGTCTTTTGCACGTGTTaGGAGAAATATGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQVFCTC*EKYVAT
Trigger: GGTGGCTACATATTTCTCTCAACACGTGCAAAAGAC...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTGTCTTTTGCACGTGTTaGGAGAAATATGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIVFCTC*EKYVAT
Trigger: GGTGGCTACATATTTCTCTCAACACGTGCAAAAGAC...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAGAGCTAGGAATTTTCTaGCTAGCACCAATACAGATT +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIELGIF*LAPIQI
Trigger: AATCTGTATTGGTGCTAGTCAGAAAATTCCTAGCTC...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAACCCTTTTGGGCTATGTaGGCTAGGAATTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQPFWAM*ARNFLT
Trigger: AGTCAGAAAATTCCTAGCTCACATAGCCCAAAAGGG...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAATGATACTGCAGGGCTaGAAACATCATCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIMILQG*KHHHFF
Trigger: GAAGAAATGATGATGTTTGCAGCCCTGCAGTATCAT...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTCTGATGAGCTGGTGTaGCACTGGATTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLSDELV*HWILLC
Trigger: GCAAAGAAGAATCCAGTGGCACACCAGCTCATCAGA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACAGCCAGATTTCATTCATaGCTTCTGCAACTGGAATCA +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTARFHS*LLQLES
Trigger: TGATTCCAGTTGCAGAAGGCATGAATGAAATCTGGC...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGCCAGATTTCATTCATaGCTTCTGCAACTGGAATCA +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPARFHS*LLQLES
Trigger: TGATTCCAGTTGCAGAAGGCATGAATGAAATCTGGC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGGCTGCCATCCAGTGTaGATACTGTTTTTCATTGTC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLGCHPV*ILFFIV
Trigger: GACAATGAAAAACAGTATGCACACTGGATGGCAGCC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAACGCCATGTTTTAATTaGATCTCCAGTGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLTPCFN*ISSAGI
Trigger: GATGCCAGCACTGGAGATGCAATTAAAACATGGCGT...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTACGCCATGTTTTAATTaGATCTCCAGTGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDITPCFN*ISSAGI
Trigger: GATGCCAGCACTGGAGATGCAATTAAAACATGGCGT...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGATCAGGCCTCCTGCATaGCTGATTTATTTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLIRPPA*LIYLGV
Trigger: TACCCCCAAATAAATCAGGCATGCAGGAGGCCTGAT...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAATATCAGGCCTCCTaGATGCCTGATTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPKYQAS*MPDLFG
Trigger: CCCAAATAAATCAGGCATGCAGGAGGCCTGATATTT...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGCCTCATCTTCAGACTaGTCATCTAGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPASSSD*SSSFFF
Trigger: AAAGAAGAAGCTAGATGACCAGTCTGAAGATGAGGC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAGAGCTGGTGTGCCACTaGATTCTTCTTTGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQELVCH*ILLCSY
Trigger: ATAAGAGCAAAGAAGAATCCAGTGGCACACCAGCTC...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATACATGCCTTCTGCAACTaGAATCAGGAGTTTAATGTT +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIHAFCN*NQEFNV
Trigger: AACATTAAACTCCTGATTCCAGTTGCAGAAGGCATG...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAAAGAACTGTCCGCCATaGTCTTGCCTTTGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQKNCPP*SCLWRL
Trigger: TAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTT...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTATTGCATCTCCAGTGCTaGCATCCATCCGAATCAGTC +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVLHLQC*HPSESV
Trigger: GACTGATTCGGATGGATGCCAGCACTGGAGATGCAA...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAAGTGCACATATTAACTaGTCTGGTAAGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIISAHIN*SGKAKK
Trigger: CTTCTTTGCCTTACCAGACCAGTTAATATGTGCACT...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAACAGTCTTTGAACCATaGATTATTGAACAATACTGG +
Preference number: 4 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVTVFEP*IIEQYW
Trigger: CCAGTATTGTTCAATAATCCATGGTTCAAAGACTGT...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAGGTGACGTGATTGGTTaGCTGACAGCAAGTATACCA +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVGDVIG*LTASIP
Trigger: TGGTATACTTGCTGTCAGTCAACCAATCACGTCACC...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTGACGTGATTGGTTaGCTGACAGCAAGTATACCA +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQGDVIG*LTASIP
Trigger: TGGTATACTTGCTGTCAGTCAACCAATCACGTCACC...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGAAGAGCTTGAGGCTTaGACATTTTTGCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPEELEA*TFLPRF
Trigger: AAATCTTGGCAAAAATGTTCAAGCCTCAAGCTCTTC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATCACATCTTGTTCCATaGGAGATCTTGAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTSHLVP*EILRNQ
Trigger: TTGATTCCTCAAGATCTCTCATGGAACAAGATGTGA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGAAAAGCTGTAATACTTaGATCGGAGCAGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLKSCNT*IGAARP
Trigger: AGGCCTTGCTGCTCCGATTCAAGTATTACAGCTTTT...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAAGTAATCTCCAGGTCTaGAAGGGCAGCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVSNLQV*KGSINF
Trigger: GAAGTTGATGCTGCCCTTTCAGACCTGGAGATTACT...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATGCTCTGGTATTAACTaGGGATCTGGGTTTAAATGC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLCSGIN*GSGFKC
Trigger: GCATTTAAACCCAGATCCTCAGTTAATACCAGAGCA...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAAACCTTGCAATGAAGTaGGTGATGCCAAATTCAGGT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQNLAMK*VMPNSG
Trigger: ACCTGAATTTGGCATCACTCACTTCATTGCAAGGTT...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTAACCTTGCAATGAAGTaGGTGATGCCAAATTCAGGT +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDINLAMK*VMPNSG
Trigger: ACCTGAATTTGGCATCACTCACTTCATTGCAAGGTT...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTCTTTTGCACGTGTTaGGAGAAATATGTAGCCACC +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFVFCTC*EKYVAT
Trigger: GGTGGCTACATATTTCTCTCAACACGTGCAAAAGAC...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAAAGAACATCAGTGCCTaGTCCAGGAGTGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQKNISA*SRSDKR
Trigger: CCTCTTATCACTCCTGGATCAGGCACTGATGTTCTT...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAATCTGATGAGCTGGTGTaGCACTGGATTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQSDELV*HWILLC
Trigger: GCAAAGAAGAATCCAGTGGCACACCAGCTCATCAGA...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGACGCCATGTTTTAATTaGATCTCCAGTGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLTPCFN*ISSAGI
Trigger: GATGCCAGCACTGGAGATGCAATTAAAACATGGCGT...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AATAGTCAACCATGGTCTGTCTGTACTTTAAGAGGTGGTGGTACAAATAATCATACGCCATGTTTTAATTaGATCTCCAGTGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: NSQPWSVCTLRGGGTNNHTPCFN*ISSAGI
Trigger: GATGCCAGCACTGGAGATGCAATTAAAACATGGCGT...ATGATTATTTGTACCACCACCTCTTAAAGTACAGACAGACCATGGTTGACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553663.5
CDS-3UTR GCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTACGCCATGTTTTAATTaGATCTCCAGTGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFTPCFN*ISSAGI
Trigger: GATGCCAGCACTGGAGATGCAATTAAAACATGGCGT...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTACAATCGTACTTCATCTaGAAACTCTACGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLQSYFI*KLYGDH
Trigger: ATGGTCACCGTAGAGTTTGCAGATGAAGTACGATTG...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAACAATCGTACTTCATCTaGAAACTCTACGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQQSYFI*KLYGDH
Trigger: ATGGTCACCGTAGAGTTTGCAGATGAAGTACGATTG...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAAAATATCAGGCCTCCTaGATGCCTGATTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLKYQAS*MPDLFG
Trigger: CCCAAATAAATCAGGCATGCAGGAGGCCTGATATTT...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTAAATATCAGGCCTCCTaGATGCCTGATTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIKYQAS*MPDLFG
Trigger: CCCAAATAAATCAGGCATGCAGGAGGCCTGATATTT...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGCCTCATCTTCAGACTaGTCATCTAGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLASSSD*SSSFFF
Trigger: AAAGAAGAAGCTAGATGACCAGTCTGAAGATGAGGC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGGAGCTGGTGTGCCACTaGATTCTTCTTTGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLELVCH*ILLCSY
Trigger: ATAAGAGCAAAGAAGAATCCAGTGGCACACCAGCTC...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGAAGAGCTTGAGGCTTaGACATTTTTGCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLEELEA*TFLPRF
Trigger: AAATCTTGGCAAAAATGTTCAAGCCTCAAGCTCTTC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAGAAGAGCTTGAGGCTTaGACATTTTTGCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQEELEA*TFLPRF
Trigger: AAATCTTGGCAAAAATGTTCAAGCCTCAAGCTCTTC...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAAAAAGCTGTAATACTTaGATCGGAGCAGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQKSCNT*IGAARP
Trigger: AGGCCTTGCTGCTCCGATTCAAGTATTACAGCTTTT...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGTTAAATTTTTGGCCTaGAATGTTTACATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPVKFLA*NVYIWG
Trigger: ACCCCAGATGTAAACATTTCAGGCCAAAAATTTAAC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTGCTCTGGTATTAACTaGGGATCTGGGTTTAAATGC +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLCSGIN*GSGFKC
Trigger: GCATTTAAACCCAGATCCTCAGTTAATACCAGAGCA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp CCATGGTCTGTCTGTACTTTAAGAGGTGGTGGTACAAATAATCATCAGAATTTATGCTCTGGTATTAACTaGGGATCTGGGTTTAAATGC +
Preference number: 4 (lower is better)
Translates to: PWSVCTLRGGGTNNHQNLCSGIN*GSGFKC
Trigger: GCATTTAAACCCAGATCCTCAGTTAATACCAGAGCA...TAAATTCTGATGATTATTTGTACCACCACCTCTTAAAGTACAGACAGACCATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553663.5
CDS-3UTR TCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTGAGTTATATCAGTCGTaGTCTGCTCTGGTATTAACT +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIELYQS*SALVLT
Trigger: AGTTAATACCAGAGCAGATCACGACTGATATAACTC...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAGAGTTATATCAGTCGTaGTCTGCTCTGGTATTAACT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQELYQS*SALVLT
Trigger: AGTTAATACCAGAGCAGATCACGACTGATATAACTC...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AATAGTCAACCATGGTCTGTCTGTACTTTAAGAGGTGGTGGTACAAATAATCATAACCTTGCAATGAAGTaGGTGATGCCAAATTCAGGT +
Preference number: 4 (lower is better)
Translates to: NSQPWSVCTLRGGGTNNHNLAMK*VMPNSG
Trigger: ACCTGAATTTGGCATCACTCACTTCATTGCAAGGTT...ATGATTATTTGTACCACCACCTCTTAAAGTACAGACAGACCATGGTTGACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553663.5
CDS-3UTR TCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTCTACTTCAGTACAAATaGAGGACAATCGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPLLQYK*RTIVLH
Trigger: ATGAAGTACGATTGTCCTTCATTTGTACTGAAGTAG...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAACCACCAATGAATTCATaGACCACTTTGCAATCTACT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQPPMNS*TTLQST
Trigger: AGTAGATTGCAAAGTGGTTCATGAATTCATTGGTGG...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTACCACCAATGAATTCATaGACCACTTTGCAATCTACT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLPPMNS*TTLQST
Trigger: AGTAGATTGCAAAGTGGTTCATGAATTCATTGGTGG...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTACCCTTTTGGGCTATGTaGGCTAGGAATTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVPFWAM*ARNFLT
Trigger: AGTCAGAAAATTCCTAGCTCACATAGCCCAAAAGGG...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTCAAGTATACCAGGATTaGCTTCTGACAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFQVYQD*LLTKHC
Trigger: ACAGTGCTTTGTCAGAAGGCAATCCTGGTATACTTG...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATCATTTCTTCTTCTGTaGATTCAATCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTSFLLL*IQSLPG
Trigger: TCCTGGAAGAGATTGAATGCACAGAAGAAGAAATGA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAATGATACTGCAGGGCTaGAAACATCATCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLMILQG*KHHHFF
Trigger: GAAGAAATGATGATGTTTGCAGCCCTGCAGTATCAT...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATACACTGGATTCTTCTTTaGTCTTATAACAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIHWILL*SYNKKW
Trigger: CCATTTCTTGTTATAAGAGCAAAGAAGAATCCAGTG...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGGCCAGATTTCATTCATaGCTTCTGCAACTGGAATCA +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLARFHS*LLQLES
Trigger: TGATTCCAGTTGCAGAAGGCATGAATGAAATCTGGC...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATCTGGGTTTAAATGCTaGATCTTCAGAAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTSGFKC*IFRKER
Trigger: TCTTTCCTTTCTGAAGATGCAGCATTTAAACCCAGA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGCAATCGTACTTCATCTaGAAACTCTACGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLQSYFI*KLYGDH
Trigger: ATGGTCACCGTAGAGTTTGCAGATGAAGTACGATTG...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGCCTCATCTTCAGACTaGTCATCTAGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFASSSD*SSSFFF
Trigger: AAAGAAGAAGCTAGATGACCAGTCTGAAGATGAGGC...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACACATGAGCATCATAAGTaGGGGTCATTGTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTHEHHK*GSLFYY
Trigger: ATAGTAAAACAATGACCCCCACTTATGATGCTCATG...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTCATGAGCATCATAAGTaGGGGTCATTGTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPHEHHK*GSLFYY
Trigger: ATAGTAAAACAATGACCCCCACTTATGATGCTCATG...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAGAATCAAGCCATCCTTaGTTGATTTTTGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIIESSHP*LIFALS
Trigger: TGATAAAGCAAAAATCAACCAAGGATGGCTTGATTC...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTACATGCCTTCTGCAACTaGAATCAGGAGTTTAATGTT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLHAFCN*NQEFNV
Trigger: AACATTAAACTCCTGATTCCAGTTGCAGAAGGCATG...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAACAGTCTTTGAACCATaGATTATTGAACAATACTGG +
Preference number: 4 (lower is better)
Translates to: TWPVQALELRTLWQIMIITVFEP*IIEQYW
Trigger: CCAGTATTGTTCAATAATCCATGGTTCAAAGACTGT...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTTATCAAGAAGAGCTTaGGGCTTGAACATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLLSRRA*GLNIFA
Trigger: GGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTCACATCTTGTTCCATaGGAGATCTTGAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLSHLVP*EILRNQ
Trigger: TTGATTCCTCAAGATCTCTCATGGAACAAGATGTGA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAGTTAAATTTTTGGCCTaGAATGTTTACATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQVKFLA*NVYIWG
Trigger: ACCCCAGATGTAAACATTTCAGGCCAAAAATTTAAC...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGTTAAATTTTTGGCCTaGAATGTTTACATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLVKFLA*NVYIWG
Trigger: ACCCCAGATGTAAACATTTCAGGCCAAAAATTTAAC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTATGCTCTGGTATTAACTaGGGATCTGGGTTTAAATGC +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVCSGIN*GSGFKC
Trigger: GCATTTAAACCCAGATCCTCAGTTAATACCAGAGCA...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AATAGTCAACCATGGTCTGTCTGTACTTTAAGAGGTGGTGGTACAAATAATCATGAGTTATATCAGTCGTaGTCTGCTCTGGTATTAACT +
Preference number: 4 (lower is better)
Translates to: NSQPWSVCTLRGGGTNNHELYQS*SALVLT
Trigger: AGTTAATACCAGAGCAGATCACGACTGATATAACTC...ATGATTATTTGTACCACCACCTCTTAAAGTACAGACAGACCATGGTTGACTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553663.5
CDS-3UTR TCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTACTACTTCAGTACAAATaGAGGACAATCGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLLLQYK*RTIVLH
Trigger: ATGAAGTACGATTGTCCTTCATTTGTACTGAAGTAG...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTCCACCAATGAATTCATaGACCACTTTGCAATCTACT +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFPPMNS*TTLQST
Trigger: AGTAGATTGCAAAGTGGTTCATGAATTCATTGGTGG...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTATATGTAGCCACCAATaGATTCATGAACCACTTTGC +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFICSHQ*IHEPLC
Trigger: GCAAAGTGGTTCATGAATTCATTGGTGGCTACATAT...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAGTGATGGTTTGTTCCTaGTTTGCCCACTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVVMVCS*FAHYFS
Trigger: ACTGAAATAGTGGGCAAATCAGGAACAAACCATCAC...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGGAGCTAGGAATTTTCTaGCTAGCACCAATACAGATT +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLELGIF*LAPIQI
Trigger: AATCTGTATTGGTGCTAGTCAGAAAATTCCTAGCTC...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTACAAGTATACCAGGATTaGCTTCTGACAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVQVYQD*LLTKHC
Trigger: ACAGTGCTTTGTCAGAAGGCAATCCTGGTATACTTG...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTCATTTCTTCTTCTGTaGATTCAATCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDISFLLL*IQSLPG
Trigger: TCCTGGAAGAGATTGAATGCACAGAAGAAGAAATGA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGATGATACTGCAGGGCTaGAAACATCATCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLMILQG*KHHHFF
Trigger: GAAGAAATGATGATGTTTGCAGCCCTGCAGTATCAT...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTCACTGGATTCTTCTTTaGTCTTATAACAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPHWILL*SYNKKW
Trigger: CCATTTCTTGTTATAAGAGCAAAGAAGAATCCAGTG...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTTTCATTCATGCCTTCTaGAACTGGAATCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFFIHAF*NWNQEF
Trigger: AAACTCCTGATTCCAGTTGCAGAAGGCATGAATGAA...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGCCAGATTTCATTCATaGCTTCTGCAACTGGAATCA +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQARFHS*LLQLES
Trigger: TGATTCCAGTTGCAGAAGGCATGAATGAAATCTGGC...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATCTGGGTTTAAATGCTaGATCTTCAGAAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KVKHNDITKYQASCMPDLSGFKC*IFRKER
Trigger: TCTTTCCTTTCTGAAGATGCAGCATTTAAACCCAGA...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAACAATCGTACTTCATCTaGAAACTCTACGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQQSYFI*KLYGDH
Trigger: ATGGTCACCGTAGAGTTTGCAGATGAAGTACGATTG...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAAAATATCAGGCCTCCTaGATGCCTGATTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVKYQAS*MPDLFG
Trigger: CCCAAATAAATCAGGCATGCAGGAGGCCTGATATTT...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAACATGAGCATCATAAGTaGGGGTCATTGTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQHEHHK*GSLFYY
Trigger: ATAGTAAAACAATGACCCCCACTTATGATGCTCATG...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACAGAATCAAGCCATCCTTaGTTGATTTTTGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: LICPLFQFSIHGPKECVTESSHP*LIFALS
Trigger: TGATAAAGCAAAAATCAACCAAGGATGGCTTGATTC...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTCATGCCTTCTGCAACTaGAATCAGGAGTTTAATGTT +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFHAFCN*NQEFNV
Trigger: AACATTAAACTCCTGATTCCAGTTGCAGAAGGCATG...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTATTATCAAGAAGAGCTTaGGGCTTGAACATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVLSRRA*GLNIFA
Trigger: GGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAA...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAATCACATCTTGTTCCATaGGAGATCTTGAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQSHLVP*EILRNQ
Trigger: TTGATTCCTCAAGATCTCTCATGGAACAAGATGTGA...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTATCACATCTTGTTCCATaGGAGATCTTGAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVSHLVP*EILRNQ
Trigger: TTGATTCCTCAAGATCTCTCATGGAACAAGATGTGA...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAGAGTTATATCAGTCGTaGTCTGCTCTGGTATTAACT +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVELYQS*SALVLT
Trigger: AGTTAATACCAGAGCAGATCACGACTGATATAACTC...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAATATGTAGCCACCAATaGATTCATGAACCACTTTGC +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQICSHQ*IHEPLC
Trigger: GCAAAGTGGTTCATGAATTCATTGGTGGCTACATAT...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAATATGTAGCCACCAATaGATTCATGAACCACTTTGC +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVICSHQ*IHEPLC
Trigger: GCAAAGTGGTTCATGAATTCATTGGTGGCTACATAT...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAGAGCTAGGAATTTTCTaGCTAGCACCAATACAGATT +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVELGIF*LAPIQI
Trigger: AATCTGTATTGGTGCTAGTCAGAAAATTCCTAGCTC...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAATACAGTCCTGGGCTTaGATATATACTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVIQSWA*IYTSFQ
Trigger: CTGAAAGGAAGTATATATTCAAGCCCAGGACTGTAT...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAATACAGTCCTGGGCTTaGATATATACTTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQIQSWA*IYTSFQ
Trigger: CTGAAAGGAAGTATATATTCAAGCCCAGGACTGTAT...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAACTGAAGCTTAGCATCTaGCTGAATACCATACTTATC +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQLKLSI*LNTILI
Trigger: GATAAGTATGGTATTCAGGCAGATGCTAAGCTTCAG...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR GCA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTCACTGGATTCTTCTTTaGTCTTATAACAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIHWILL*SYNKKW
Trigger: CCATTTCTTGTTATAAGAGCAAAGAAGAATCCAGTG...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTATTCATTCATGCCTTCTaGAACTGGAATCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVFIHAF*NWNQEF
Trigger: AAACTCCTGATTCCAGTTGCAGAAGGCATGAATGAA...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAATTCATTCATGCCTTCTaGAACTGGAATCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQFIHAF*NWNQEF
Trigger: AAACTCCTGATTCCAGTTGCAGAAGGCATGAATGAA...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTACATGCCTTCTGCAACTaGAATCAGGAGTTTAATGTT +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVHAFCN*NQEFNV
Trigger: AACATTAAACTCCTGATTCCAGTTGCAGAAGGCATG...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR TCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTACTACTTCAGTACAAATaGAGGACAATCGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVLLQYK*RTIVLH
Trigger: ATGAAGTACGATTGTCCTTCATTTGTACTGAAGTAG...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR GCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTATCTGGGTTTAAATGCTaGATCTTCAGAAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVSGFKC*IFRKER
Trigger: TCTTTCCTTTCTGAAGATGCAGCATTTAAACCCAGA...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAACATGAGCATCATAAGTaGGGGTCATTGTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQHEHHK*GSLFYY
Trigger: ATAGTAAAACAATGACCCCCACTTATGATGCTCATG...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTACAGTCTTTGAACCATaGATTATTGAACAATACTGG +
Preference number: 4 (lower is better)
Translates to: VKHNDITKYQASCMPDLFTVFEP*IIEQYW
Trigger: CCAGTATTGTTCAATAATCCATGGTTCAAAGACTGT...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CCA 90 bp AATAGTCAACCATGGTCTGTCTGTACTTTAAGAGGTGGTGGTACAAATAATCATATGAATAGTCAACCATaGTCTGTCTGTACTTTAAGA +
Preference number: 4 (lower is better)
Translates to: NSQPWSVCTLRGGGTNNHMNSQP*SVCTLR
Trigger: TCTTAAAGTACAGACAGACCATGGTTGACTATTCAT...ATGATTATTTGTACCACCACCTCTTAAAGTACAGACAGACCATGGTTGACTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553663.5
CDS-3UTR GCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAACACTGGATTCTTCTTTaGTCTTATAACAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQHWILL*SYNKKW
Trigger: CCATTTCTTGTTATAAGAGCAAAGAAGAATCCAGTG...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAGAATCAAGCCATCCTTaGTTGATTTTTGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVESSHP*LIFALS
Trigger: TGATAAAGCAAAAATCAACCAAGGATGGCTTGATTC...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CCA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGAATCAAGCCATCCTTaGTTGATTTTTGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQESSHP*LIFALS
Trigger: TGATAAAGCAAAAATCAACCAAGGATGGCTTGATTC...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS CCA 90 bp CACATGGACACTCAGTTCCCACGTCCCGTCCGCGTAGCAGCCATCTaGCATCCTTATCCCGTCCAGAGCCATGGCTCCTTCCGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: HMDTQFPRPVRVAAI*HPYPVQSHGSFRAL
Trigger: GAGCGCGCGGAAGGAGCCATGGCTCTGGACGGGATAAGGATGCCAGATGGCTGCTACGCGGACGGGACGTGGGAACTGAGTGTCCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000399304.7
CDS CCA 90 bp CACATGGACACTCAGTTCCCACGTCCCGTCCGCGTAGCAGCCATCTaGCATCCTTATCCCGTCCAGAGCCATGGCTCCTTCCTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: HMDTQFPRPVRVAAI*HPYPVQSHGSFLPA
Trigger: GGCCGGCAGGAAGGAGCCATGGCTCTGGACGGGATAAGGATGCCAGATGGCTGCTACGCGGACGGGACGTGGGAACTGAGTGTCCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395631.6
ENST00000557562.1
CDS GCA 90 bp CTTTTCTCGAGTTTCTCCACCAGCTTAAGCATCACGCCTCCAATGTaGACCTCGCCGGTCACTCTCAGGGTGACATCGCGGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LFSSFSTSLSITPPM*TSPVTLRVTSRFRS
Trigger: GGACCTGAACCGCGATGTCACCCTGAGAGTGACCGGCGAGGTGCACATTGGAGGCGTGATGCTTAAGCTGGTGGAGAAACTCGAGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS CCA 90 bp CACATGGACACTCAGTTCCCACGTCCCGTCCGCGTAGCAGCCATCTaGCATCCTTATCCCGTCCAGAGCCATGGCTCCTTCCTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: HMDTQFPRPVRVAAI*HPYPVQSHGSFLLK
Trigger: CTTTAAAAGGAAGGAGCCATGGCTCTGGACGGGATAAGGATGCCAGATGGCTGCTACGCGGACGGGACGTGGGAACTGAGTGTCCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554712.5
CDS GCA 90 bp TTTACATCGAGTTTCTCCACCAGCTTAAGCATCACGCCTCCAATGTaGACCTCGCCGGTCACTCTCAGGGTGACATCGCGGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: FTSSFSTSLSITPPM*TSPVTLRVTSRFRS
Trigger: GGACCTGAACCGCGATGTCACCCTGAGAGTGACCGGCGAGGTGCACATTGGAGGCGTGATGCTTAAGCTGGTGGAGAAACTCGATGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000554712.5
CDS-3UTR CAA 90 bp CACCTTCACATACTTCATGTTGGGAAGCTGCAGGCGGAGCAGTTTGTGCTGAGGTTCACATACTTCATGTaGGGAAGCTGCAGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: HLHILHVGKLQAEQFVLRFTYFM*GSCRRS
Trigger: GCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAA...CCTCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR CAA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTATTCACATACTTCATGTaGGGAAGCTGCAGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLFTYFM*GSCRRS
Trigger: GCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAA...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS CCA 90 bp CCTGGAACAAAGACAAGAGCCATCAGTGCTGTCCCAAATGCTAGGTaGCTGGGTCCACACAAAACTACTGTGCTACTTAAAGTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: PGTKTRAISAVPNAR*LGPHKTTVLLKVCH
Trigger: ATGACAGACTTTAAGTAGCACAGTAGTTTTGTGTGGACCCAGCCACCTAGCATTTGGGACAGCACTGATGGCTCTTGTCTTTGTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS-3UTR CAA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTACAAACCAAGCAGAAGTaGGTGACAAGGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVQTKQK*VTRGFH
Trigger: ATGGAAGCCCCTTGTCACCAACTTCTGCTTGGTTTG...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS GCA 90 bp GAATATTCTGAACTTCTAAGTTGTAAGAACTGTCCGCCATGGTCTTaGCTTTGGAGGCTAATCTGCAGGCTGCCATCCAGTGTGCATACT +
Preference number: 5 (lower is better)
Translates to: EYSELLSCKNCPPWS*LWRLICRLPSSVHT
Trigger: AGTATGCACACTGGATGGCAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTTACAACTTAGAAGTTCAGAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS CCA 90 bp TCTGAACTTCTAAGTTGTAAGAACTGTCCGCCATGGTCTTGCCTTTaGAGGCTAATCTGCAGGCTGCCATCCAGTGTGCATACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: SELLSCKNCPPWSCL*RLICRLPSSVHTVF
Trigger: AAAAACAGTATGCACACTGGATGGCAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTTACAACTTAGAAGTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATATTCACATACTTCATGTaGGGAAGCTGCAGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: TWPVQALELRTLWQIMIIFTYFM*GSCRRS
Trigger: GCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAA...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CAA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTATCTACGGTGACCATTTaGATTTCCCAGTTGACATTC +
Preference number: 5 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLSTVTI*ISQLTF
Trigger: GAATGTCAACTGGGAAATCAAAATGGTCACCGTAGA...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS CCA 90 bp GAACAAAGACAAGAGCCATCAGTGCTGTCCCAAATGCTAGGTGGCTaGGTCCACACAAAACTACTGTGCTACTTAAAGTCTGTCATATCA +
Preference number: 5 (lower is better)
Translates to: EQRQEPSVLSQMLGG*VHTKLLCYLKSVIS
Trigger: TGATATGACAGACTTTAAGTAGCACAGTAGTTTTGTGTGGACCCAGCCACCTAGCATTTGGGACAGCACTGATGGCTCTTGTCTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS-3UTR CAA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTAGAAGGTGCACCAATATaGTTTGTAACCTTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLEGAPI*FVTFQS
Trigger: ACTCTGAAAGGTTACAAACAATATTGGTGCACCTTC...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTAGGTCTTTTGCACGTGTaGAGAGAAATATGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVGLLHV*REICSH
Trigger: GTGGCTACATATTTCTCTCAACACGTGCAAAAGACC...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGGCCTCCTGCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTATCTCGTTTTGGTCTTTaGCACGTGTTGAGAGAAATA +
Preference number: 5 (lower is better)
Translates to: RPPACLIYLGVGGGIKWLSRFGL*HVLREI
Trigger: TATTTCTCTCAACACGTGCAAAAGACCAAAACGAGA...TAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGCAGGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS CCA 90 bp TACATCTGGGGTAACTTCACATCCCCTGAGGTTCATCTGATGAGCTaGTGTGCCACTGGATTCTTCTTTGCTCTTATAACAAGAAATGGA +
Preference number: 5 (lower is better)
Translates to: YIWGNFTSPEVHLMS*CATGFFFALITRNG
Trigger: TCCATTTCTTGTTATAAGAGCAAAGAAGAATCCAGTGGCACACCAGCTCATCAGATGAACCTCAGGGGATGTGAAGTTACCCCAGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTCACATACTTCATGTaGGGAAGCTGCAGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: KVKHNDITKYQASCMPDLFTYFM*GSCRRS
Trigger: GCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAA...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CAA 90 bp ACTTTCACCTTCACATACTTCATGTTGGGAAGCTGCAGGCGGAGCAGTTTGTGCATGTCAGAAACAGCTTaGAAGACTCTATCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: TFTFTYFMLGSCRRSSLCMSETA*KTLSEK
Trigger: TTTCTCTGATAGAGTCTTCAAAGCTGTTTCTGACAT...GCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557562.1
CDS-3UTR CAA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTACATAAGTGGGGGTCATaGTTTTACTATACAGTCCTG +
Preference number: 5 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVHKWGS*FYYTVL
Trigger: CAGGACTGTATAGTAAAACAATGACCCCCACTTATG...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTCAAACCAAGCAGAAGTaGGTGACAAGGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPQTKQK*VTRGFH
Trigger: ATGGAAGCCCCTTGTCACCAACTTCTGCTTGGTTTG...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTATCTACGGTGACCATTTaGATTTCCCAGTTGACATTC +
Preference number: 5 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVSTVTI*ISQLTF
Trigger: GAATGTCAACTGGGAAATCAAAATGGTCACCGTAGA...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS TCA 90 bp TTAGATAGCGGGGAGACACCAAACATTCAGGAGTTATATCAGTCGTaGTCTGCTCTGGTATTAACTGAGGATCTGGGTTTAAATGCTGCA +
Preference number: 5 (lower is better)
Translates to: LDSGETPNIQELYQS*SALVLTEDLGLNAA
Trigger: TGCAGCATTTAAACCCAGATCCTCAGTTAATACCAGAGCAGATCACGACTGATATAACTCCTGAATGTTTGGTGTCTCCCCGCTATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553663.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTTCACATACTTCATGTaGGGAAGCTGCAGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLFTYFM*GSCRRS
Trigger: GCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CAA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTCAAACCAAGCAGAAGTaGGTGACAAGGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIQTKQK*VTRGFH
Trigger: ATGGAAGCCCCTTGTCACCAACTTCTGCTTGGTTTG...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTATCTCGTTTTGGTCTTTaGCACGTGTTGAGAGAAATA +
Preference number: 5 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVSRFGL*HVLREI
Trigger: TATTTCTCTCAACACGTGCAAAAGACCAAAACGAGA...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTGCAAGTATACCAGGATaGCCTTCTGACAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIASIPG*PSDKAL
Trigger: CAGTGCTTTGTCAGAAGGCAATCCTGGTATACTTGC...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGCAAGTATACCAGGATaGCCTTCTGACAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: KVKHNDITKYQASCMPDLASIPG*PSDKAL
Trigger: CAGTGCTTTGTCAGAAGGCAATCCTGGTATACTTGC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp GCATGCCTGATTTATTTGGGGGTAGGGGGAGGAATTAAATGGCTACCAGAAGTATTTATCAAGAAGAGCTaGAGGCTTGAACATTTTTGC +
Preference number: 5 (lower is better)
Translates to: ACLIYLGVGGGIKWLPEVFIKKS*RLEHFC
Trigger: GCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAA...TACTTCTGGTAGCCATTTAATTCCTCCCCCTACCCCCAAATAAATCAGGCATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGGTCTTTTGCACGTGTaGAGAGAAATATGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPGLLHV*REICSH
Trigger: GTGGCTACATATTTCTCTCAACACGTGCAAAAGACC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACACATAAGTGGGGGTCATaGTTTTACTATACAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LICPLFQFSIHGPKECVTHKWGS*FYYTVL
Trigger: CAGGACTGTATAGTAAAACAATGACCCCCACTTATG...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAACAAACCAAGCAGAAGTaGGTGACAAGGGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQQTKQK*VTRGFH
Trigger: ATGGAAGCCCCTTGTCACCAACTTCTGCTTGGTTTG...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATAGCATACTGTTTTTCATaGTCACAACGAAGCCAGATT +
Preference number: 5 (lower is better)
Translates to: TWPVQALELRTLWQIMIIAYCFS*SQRSQI
Trigger: AATCTGGCTTCGTTGTGACAATGAAAAACAGTATGC...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS TCA 90 bp GAATCAAGCCATCCTTGGTTGATTTTTGCTTTATCAAGAAGAGCTTaGGGCTTGAACATTTTTGCCAAGATTTCTGGTGACGTGATTGGT +
Preference number: 5 (lower is better)
Translates to: ESSHPWLIFALSRRA*GLNIFAKISGDVIG
Trigger: ACCAATCACGTCACCAGAAATCTTGGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAAGCAAAAATCAACCAAGGATGGCTTGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000554152.5
ENST00000554288.1
ENST00000635305.1
CDS-3UTR CAA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTCATAAGTGGGGGTCATaGTTTTACTATACAGTCCTG +
Preference number: 5 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIHKWGS*FYYTVL
Trigger: CAGGACTGTATAGTAAAACAATGACCCCCACTTATG...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp ACATGGCCAGTCCAGGCATTAGAGTTAAGGACATTGTGGCAAATCATGATCATATCAAGCCATCCTTGGTaGATTTTTGCTTTATCAAGA +
Preference number: 5 (lower is better)
Translates to: TWPVQALELRTLWQIMIISSHPW*IFALSR
Trigger: TCTTGATAAAGCAAAAATCAACCAAGGATGGCTTGA...TATGATCATGATTTGCCACAATGTCCTTAACTCTAATGCCTGGACTGGCCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CAA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTGAAGGTGCACCAATATaGTTTGTAACCTTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPEGAPI*FVTFQS
Trigger: ACTCTGAAAGGTTACAAACAATATTGGTGCACCTTC...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTCTACGGTGACCATTTaGATTTCCCAGTTGACATTC +
Preference number: 5 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDISTVTI*ISQLTF
Trigger: GAATGTCAACTGGGAAATCAAAATGGTCACCGTAGA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATCTACGGTGACCATTTaGATTTCCCAGTTGACATTC +
Preference number: 5 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQSTVTI*ISQLTF
Trigger: GAATGTCAACTGGGAAATCAAAATGGTCACCGTAGA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGGGTCTTTTGCACGTGTaGAGAGAAATATGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLGLLHV*REICSH
Trigger: GTGGCTACATATTTCTCTCAACACGTGCAAAAGACC...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACAATGTCAGAAACAGCTTaGAAGACTCTATCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: LICPLFQFSIHGPKECVTMSETA*KTLSEK
Trigger: TTTCTCTGATAGAGTCTTCAAAGCTGTTTCTGACAT...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CAA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTATACAGTCCTGGGCTaGAATATATACTTCCTGATC +
Preference number: 5 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIYTVLG*NIYFLI
Trigger: GATCAGGAAGTATATATTCAAGCCCAGGACTGTATA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR CAA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGCATAAGTGGGGGTCATaGTTTTACTATACAGTCCTG +
Preference number: 5 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLHKWGS*FYYTVL
Trigger: CAGGACTGTATAGTAAAACAATGACCCCCACTTATG...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGTGATGGTTTGTTCCTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTTTTATCAAGAAGAGCTaGAGGCTTGAACATTTTTGC +
Preference number: 5 (lower is better)
Translates to: SDGLFLICPLFQFSIHGPFIKKS*RLEHFC
Trigger: GCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAA...AGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAGGAACAAACCATCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp CTGATTTGCCCACTATTTCAGTTTTCAATTCATGGCCCTAAGGAATGTGTGACATTTATCAAGAAGAGCTaGAGGCTTGAACATTTTTGC +
Preference number: 5 (lower is better)
Translates to: LICPLFQFSIHGPKECVTFIKKS*RLEHFC
Trigger: GCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAA...TGTCACACATTCCTTAGGGCCATGAATTGAAAACTGAAATAGTGGGCAAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGAAGGTGCACCAATATaGTTTGTAACCTTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: KVKHNDITKYQASCMPDLEGAPI*FVTFQS
Trigger: ACTCTGAAAGGTTACAAACAATATTGGTGCACCTTC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAGCATACTGTTTTTCATaGTCACAACGAAGCCAGATT +
Preference number: 5 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQAYCFS*SQRSQI
Trigger: AATCTGGCTTCGTTGTGACAATGAAAAACAGTATGC...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAGCATACTGTTTTTCATaGTCACAACGAAGCCAGATT +
Preference number: 5 (lower is better)
Translates to: KVKHNDITKYQASCMPDLAYCFS*SQRSQI
Trigger: AATCTGGCTTCGTTGTGACAATGAAAAACAGTATGC...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTAGGTCTTTTGCACGTGTaGAGAGAAATATGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVGLLHV*REICSH
Trigger: GTGGCTACATATTTCTCTCAACACGTGCAAAAGACC...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTCTCGTTTTGGTCTTTaGCACGTGTTGAGAGAAATA +
Preference number: 5 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDISRFGL*HVLREI
Trigger: TATTTCTCTCAACACGTGCAAAAGACCAAAACGAGA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS TCA 90 bp AAACATTCAGGAGTTATATCAGTCGTGATCTGCTCTGGTATTAACTaGGGATCTGGGTTTAAATGCTGCATCTTCAGAAAGGAAAGAATA +
Preference number: 5 (lower is better)
Translates to: KHSGVISVVICSGIN*GSGFKCCIFRKERI
Trigger: TATTCTTTCCTTTCTGAAGATGCAGCATTTAAACCCAGATCCTCAGTTAATACCAGAGCAGATCACGACTGATATAACTCCTGAATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTAATGTCAGAAACAGCTTaGAAGACTCTATCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: KVKHNDITKYQASCMPDLMSETA*KTLSEK
Trigger: TTTCTCTGATAGAGTCTTCAAAGCTGTTTCTGACAT...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CAA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTATACAGTCCTGGGCTaGAATATATACTTCCTGATC +
Preference number: 5 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLYTVLG*NIYFLI
Trigger: GATCAGGAAGTATATATTCAAGCCCAGGACTGTATA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
CDS-3UTR CAA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTTTATCAAGAAGAGCTaGAGGCTTGAACATTTTTGC +
Preference number: 5 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDIFIKKS*RLEHFC
Trigger: GCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp ATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAAACACAATGACATTTCAAGCCATCCTTGGTaGATTTTTGCTTTATCAAGA +
Preference number: 5 (lower is better)
Translates to: IKHDGLIAFSFKVKHNDISSHPW*IFALSR
Trigger: TCTTGATAAAGCAAAAATCAACCAAGGATGGCTTGA...AATGTCATTGTGTTTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATCAAGCCATCCTTGGTaGATTTTTGCTTTATCAAGA +
Preference number: 5 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQSSHPW*IFALSR
Trigger: TCTTGATAAAGCAAAAATCAACCAAGGATGGCTTGA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp GTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGCATACTGTTTTTCATaGTCACAACGAAGCCAGATT +
Preference number: 5 (lower is better)
Translates to: VKHNDITKYQASCMPDLFAYCFS*SQRSQI
Trigger: AATCTGGCTTCGTTGTGACAATGAAAAACAGTATGC...AAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAATCTACGGTGACCATTTaGATTTCCCAGTTGACATTC +
Preference number: 5 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQSTVTI*ISQLTF
Trigger: GAATGTCAACTGGGAAATCAAAATGGTCACCGTAGA...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AAGGTCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATATACAGTCCTGGGCTaGAATATATACTTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: KVKHNDITKYQASCMPDLYTVLG*NIYFLS
Trigger: TGAAAGGAAGTATATATTCAAGCCCAGGACTGTATA...TAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp AGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGGTCAATATACAGTCCTGGGCTaGAATATATACTTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: RTKTNQARRTNSIFLQGQYTVLG*NIYFLS
Trigger: TGAAAGGAAGTATATATTCAAGCCCAGGACTGTATA...TTGACCTTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTTTATCAAGAAGAGCTaGAGGCTTGAACATTTTTGC +
Preference number: 5 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLFIKKS*RLEHFC
Trigger: GCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp TCAAACACAATGACATTACTAAATATCAGGCCTCCTGCATGCCTGATTTATTTGTCAAGCCATCCTTGGTaGATTTTTGCTTTATCAAGA +
Preference number: 5 (lower is better)
Translates to: SNTMTLLNIRPPACLIYLSSHPW*IFALSR
Trigger: TCTTGATAAAGCAAAAATCAACCAAGGATGGCTTGA...CAAATAAATCAGGCATGCAGGAGGCCTGATATTTAGTAATGTCATTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS-3UTR CAA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAGAAGGTGCACCAATATaGTTTGTAACCTTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQEGAPI*FVTFQS
Trigger: ACTCTGAAAGGTTACAAACAATATTGGTGCACCTTC...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS TCA 90 bp CTACTTAAAGTCTGTCATATCACAAAACACTTGTTGATCCTCAAATaGTCAGTCTGTCTAAAACCTAAACGAATAATGCCTTTAAGTCCC +
Preference number: 5 (lower is better)
Translates to: LLKVCHITKHLLILK*SVCLKPKRIMPLSP
Trigger: GGGACTTAAAGGCATTATTCGTTTAGGTTTTAGACAGACTGATCATTTGAGGATCAACAAGTGTTTTGTGATATGACAGACTTTAAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS-3UTR CAA 90 bp TATTCAAGGACAAAAACAAATCAAGCACGACGGACTAATAGCATTTTCCTTCAAATGTCAGAAACAGCTTaGAAGACTCTATCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: YSRTKTNQARRTNSIFLQMSETA*KTLSEK
Trigger: TTTCTCTGATAGAGTCTTCAAAGCTGTTTCTGACAT...TTGAAGGAAAATGCTATTAGTCCGTCGTGCTTGATTTGTTTTTGTCCTTGAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
CDS-3UTR CAA 90 bp AGAGTTGCATATTTTAGGCAGACAGTGATTATGCTGGTGAATACTAAAAGTGTATCAAGCCATCCTTGGTaGATTTTTGCTTTATCAAGA +
Preference number: 5 (lower is better)
Translates to: RVAYFRQTVIMLVNTKSVSSHPW*IFALSR
Trigger: TCTTGATAAAGCAAAAATCAACCAAGGATGGCTTGA...TACACTTTTAGTATTCACCAGCATAATCACTGTCTGCCTAAAATATGCAACTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000554152.5
ENST00000635305.1
CDS TCA 72 bp CGCCTCCAATGTGCACCTCGCCGGTCACTCTCAGGGTaGCATCGCGGTTCAGGTCCGTCACATGGACACTCA +
Preference number: 6 (lower is better)
Translates to: RLQCAPRRSLSG*HRGSGPSHGHS
Trigger: TGAGTGTCCATGTGACGGACCTGAACCGCGATGTCACCCTGAGAGTGACCGGCGAGGTGCACATTGGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000554712.5
ENST00000557562.1
CDS CCA 72 bp ACTCAGTTCCCACGTCCCGTCCGCGTAGCAGCCATCTaGCATCCTTATCCCGTCCAGAGCCATGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: TQFPRPVRVAAI*HPYPVQSHGSF
Trigger: GAAGGAGCCATGGCTCTGGACGGGATAAGGATGCCAGATGGCTGCTACGCGGACGGGACGTGGGAACTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000554712.5
ENST00000557562.1
CDS GCA 72 bp AGTTTCTCCACCAGCTTAAGCATCACGCCTCCAATGTaGACCTCGCCGGTCACTCTCAGGGTGACATCGCGG +
Preference number: 6 (lower is better)
Translates to: SFSTSLSITPPM*TSPVTLRVTSR
Trigger: CCGCGATGTCACCCTGAGAGTGACCGGCGAGGTGCACATTGGAGGCGTGATGCTTAAGCTGGTGGAGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000554712.5
ENST00000557562.1
CDS GCA 72 bp GTCTATGCCCAGGTAGGGAAGAATGTCCTTGTGGCCTaGACATCTTCCTACAGCCTCCAGAACGCAACTGGA +
Preference number: 6 (lower is better)
Translates to: VYAQVGKNVLVA*TSSYSLQNATG
Trigger: TCCAGTTGCGTTCTGGAGGCTGTAGGAAGATGTGCAGGCCACAAGGACATTCTTCCCTACCTGGGCATAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS CCA 72 bp CTAAGTTGTAAGAACTGTCCGCCATGGTCTTGCCTTTaGAGGCTAATCTGCAGGCTGCCATCCAGTGTGCAT +
Preference number: 6 (lower is better)
Translates to: LSCKNCPPWSCL*RLICRLPSSVH
Trigger: ATGCACACTGGATGGCAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTTACAACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS GCA 72 bp GAACTTCTAAGTTGTAAGAACTGTCCGCCATGGTCTTaGCTTTGGAGGCTAATCTGCAGGCTGCCATCCAGT +
Preference number: 6 (lower is better)
Translates to: ELLSCKNCPPWS*LWRLICRLPSS
Trigger: ACTGGATGGCAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTTACAACTTAGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS CCA 72 bp CAAGAGCCATCAGTGCTGTCCCAAATGCTAGGTGGCTaGGTCCACACAAAACTACTGTGCTACTTAAAGTCT +
Preference number: 6 (lower is better)
Translates to: QEPSVLSQMLGG*VHTKLLCYLKS
Trigger: AGACTTTAAGTAGCACAGTAGTTTTGTGTGGACCCAGCCACCTAGCATTTGGGACAGCACTGATGGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS CCA 72 bp TATTCTGAACTTCTAAGTTGTAAGAACTGTCCGCCATaGTCTTGCCTTTGGAGGCTAATCTGCAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: YSELLSCKNCPP*SCLWRLICRLP
Trigger: TGGCAGCCTGCAGATTAGCCTCCAAAGGCAAGACCATGGCGGACAGTTCTTACAACTTAGAAGTTCAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS CCA 72 bp AAGACAAGAGCCATCAGTGCTGTCCCAAATGCTAGGTaGCTGGGTCCACACAAAACTACTGTGCTACTTAAA +
Preference number: 6 (lower is better)
Translates to: KTRAISAVPNAR*LGPHKTTVLLK
Trigger: TTTAAGTAGCACAGTAGTTTTGTGTGGACCCAGCCACCTAGCATTTGGGACAGCACTGATGGCTCTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS CCA 72 bp GACAATCGTACTTCATCTGCAAACTCTACGGTGACCTaGAACAAAGACAAGAGCCATCAGTGCTGTCCCAAA +
Preference number: 6 (lower is better)
Translates to: DNRTSSANSTVT*NKDKSHQCCPK
Trigger: TTTGGGACAGCACTGATGGCTCTTGTCTTTGTTCCAGGTCACCGTAGAGTTTGCAGATGAAGTACGATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS CCA 72 bp GGTAACTTCACATCCCCTGAGGTTCATCTGATGAGCTaGTGTGCCACTGGATTCTTCTTTGCTCTTATAACA +
Preference number: 6 (lower is better)
Translates to: GNFTSPEVHLMS*CATGFFFALIT
Trigger: TGTTATAAGAGCAAAGAAGAATCCAGTGGCACACCAGCTCATCAGATGAACCTCAGGGGATGTGAAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS TCA 72 bp GGGGAGACACCAAACATTCAGGAGTTATATCAGTCGTaGTCTGCTCTGGTATTAACTGAGGATCTGGGTTTA +
Preference number: 6 (lower is better)
Translates to: GETPNIQELYQS*SALVLTEDLGL
Trigger: TAAACCCAGATCCTCAGTTAATACCAGAGCAGATCACGACTGATATAACTCCTGAATGTTTGGTGTCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553663.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS TCA 72 bp AACATTTTTGCCAAGATTTCTGGTGACGTGATTGGTTaGCTGACAGCAAGTATACCAGGATTGCCTTCTGAC +
Preference number: 6 (lower is better)
Translates to: NIFAKISGDVIG*LTASIPGLPSD
Trigger: GTCAGAAGGCAATCCTGGTATACTTGCTGTCAGTCAACCAATCACGTCACCAGAAATCTTGGCAAAAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000554152.5
ENST00000554288.1
ENST00000635305.1
CDS CAA 72 bp CGCAGTCTCATAATCTTGTCGAATTGTCTCAAACGCTaGGAAAAGGAACTCGCTAGGCAGATAACCTTTTGT +
Preference number: 6 (lower is better)
Translates to: RSLIILSNCLKR*EKELARQITFC
Trigger: ACAAAAGGTTATCTGCCTAGCGAGTTCCTTTTCCAAGCGTTTGAGACAATTCGACAAGATTATGAGACTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554712.5
CDS TCA 72 bp GGAGTTATATCAGTCGTGATCTGCTCTGGTATTAACTaGGGATCTGGGTTTAAATGCTGCATCTTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: GVISVVICSGIN*GSGFKCCIFRK
Trigger: CTTTCTGAAGATGCAGCATTTAAACCCAGATCCTCAGTTAATACCAGAGCAGATCACGACTGATATAACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000553663.5
ENST00000553768.1
ENST00000554152.5
ENST00000635305.1
CDS TCA 72 bp AGCATTTCCTCCATTCCTTACTACTCCCACATCATATaGCCACGGGATAAACAATTTCTAGGCTTACACAAC +
Preference number: 6 (lower is better)
Translates to: SISSIPYYSHII*PRDKQFLGLHN
Trigger: GTTGTGTAAGCCTAGAAATTGTTTATCCCGTGGTCATATGATGTGGGAGTAGTAAGGAATGGAGGAAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS GCA 72 bp TTGATTCAATTAATGAGAATGCCTCTCTTCAAGTCGTaGAGGAAAGCCTACTTCCTGTGTTTTAACGTTCGC +
Preference number: 6 (lower is better)
Translates to: LIQLMRMPLFKS*RKAYFLCFNVR
Trigger: GCGAACGTTAAAACACAGGAAGTAGGCTTTCCTGCACGACTTGAAGAGAGGCATTCTCATTAATTGAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS CAA 90 bp ACTCCAGTTCGCAGTCTCATAATCTTGTCGAATTGTCTCAAACGCTaGGAAAAGGAACTCGCTAGGCAGATAACCTTTTGTTCATTAACA +
Preference number: 6 (lower is better)
Translates to: TPVRSLIILSNCLKR*EKELARQITFCSLT
Trigger: TGTTAATGAACAAAAGGTTATCTGCCTAGCGAGTTCCTTTTCCAAGCGTTTGAGACAATTCGACAAGATTATGAGACTGCGAACTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554712.5
CDS GCA 72 bp GAGTACATAGTTGCCACACTTGAGACATATTCCAAATaGATACACCTAACGGTACTACTATTACAGAACAGC +
Preference number: 6 (lower is better)
Translates to: EYIVATLETYSK*IHLTVLLLQNS
Trigger: GCTGTTCTGTAATAGTAGTACCGTTAGGTGTATGCATTTGGAATATGTCTCAAGTGTGGCAACTATGTACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555546.5
ENST00000557255.1
CDS CCA 72 bp AGGAATGCAAGGGTTTTAGGTCGTTCAGTTCTCAAATaGTCTCTGGTGATTGATTCAATTAATGAGAATGCC +
Preference number: 6 (lower is better)
Translates to: RNARVLGRSVLK*SLVIDSINENA
Trigger: GGCATTCTCATTAATTGAATCAATCACCAGAGACCATTTGAGAACTGAACGACCTAAAACCCTTGCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS CAA 72 bp AAGTGGGGGTCATTGTTTTACTATACAGTCCTGGGCTaGAATATATACTTCCTTTCAGAGGGCCAATGTAAA +
Preference number: 6 (lower is better)
Translates to: KWGSLFYYTVLG*NIYFLSEGQCK
Trigger: TTTACATTGGCCCTCTGAAAGGAAGTATATATTCAAGCCCAGGACTGTATAGTAAAACAATGACCCCCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554152.5
ENST00000635305.1
CDS TCA 72 bp CATCCTTGGTTGATTTTTGCTTTATCAAGAAGAGCTTaGGGCTTGAACATTTTTGCCAAGATTTCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: HPWLIFALSRRA*GLNIFAKISGD
Trigger: GTCACCAGAAATCTTGGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAAGCAAAAATCAACCAAGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000554152.5
ENST00000554288.1
ENST00000635305.1
CDS TCA 72 bp CTCATTTTCCTTCACATCTTGTTCCATGAGAGATCTTaGGGAATCAAGCCATCCTTGGTTGATTTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: LIFLHILFHERS*GIKPSLVDFCF
Trigger: AAAGCAAAAATCAACCAAGGATGGCTTGATTCCTCAAGATCTCTCATGGAACAAGATGTGAAGGAAAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000399304.7
ENST00000553373.5
ENST00000554152.5
ENST00000635305.1
CDS TCA 72 bp CTTTTGCACGTGTTGAGAGAAATATGTAGCCACCAATaGATTCATGAACCACTTTGCAATCTACTTCAGTAC +
Preference number: 6 (lower is better)
Translates to: LLHVLREICSHQ*IHEPLCNLLQY
Trigger: GTACTGAAGTAGATTGCAAAGTGGTTCATGAATTCATTGGTGGCTACATATTTCTCTCAACACGTGCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341590.8
ENST00000343279.8
ENST00000395631.6
ENST00000553373.5
ENST00000554152.5
ENST00000555546.5
ENST00000557255.1
ENST00000635305.1
CDS TCA 72 bp CAAAAAGTACTATTAGGAGTACATAGTTGCCACACTTaGGACATATTCCAAATGCATACACCTAACGGTACT +
Preference number: 6 (lower is better)
Translates to: QKVLLGVHSCHT*DIFQMHTPNGT
Trigger: AGTACCGTTAGGTGTATGCATTTGGAATATGTCTCAAGTGTGGCAACTATGTACTCCTAATAGTACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555546.5
ENST00000557255.1
CDS CAA 90 bp ACCACACACAAACTGTCCTCCTGTCAGTTAAAGATAAATCTTCAGTaGATAGTTTCTAGTCAAGAACTATCATTTAAAAGGCTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: TTHKLSSCQLKINLQ*IVSSQELSFKRLLR
Trigger: TCTCAGAAGCCTTTTAAATGATAGTTCTTGACTAGAAACTATCAACTGAAGATTTATCTTTAACTGACAGGAGGACAGTTTGTGTGTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557255.1
CDS TCA 72 bp GTCTGTCATATCACAAAACACTTGTTGATCCTCAAATaGTCAGTCTGTCTAAAACCTAAACGAATAATGCCT +
Preference number: 6 (lower is better)
Translates to: VCHITKHLLILK*SVCLKPKRIMP
Trigger: AGGCATTATTCGTTTAGGTTTTAGACAGACTGATCATTTGAGGATCAACAAGTGTTTTGTGATATGACAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557255.1