Pregenerated sensors for FERD3L (Homo sapiens)
Ensembl gene IDs: ENSG00000146618Ensembl transcript IDs: ENST00000275461.3
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGACCGCGCCATCCTCCTaGGTCTTCCCTCTCGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: SLTQCPVLTHPSTTRRGRTAPSS*VFPLGA Trigger: CGCTCCGAGAGGGAAGACCCAGGAGGATGGCGCGGT...CCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CCA 90 bp | AGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGTCCTTTCGCGGATGTTaGCGGCCTGGCGCTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SLTQCPVLTHPSTTRRGRSFRGC*RPGAGR Trigger: ACGCCCAGCGCCAGGCCGCCAACATCCGCGAAAGGA...CCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR GCA 90 bp | AGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGCAAGGAGACCCCGGGTaGGAAGTCGCAGAGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLTQCPVLTHPSTTRRGRQGDPG*EVAEER Trigger: CCTCTCCTCTGCGACTTCGCACCCGGGGTCTCCTTG...CCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR GCA 90 bp | CCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCTTTAGCCTCACCCAGTaGCCGGTCCTGACACACCCC | + |
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Preference number: 4 (lower is better) Translates to: PHPVPGPDTPQHYQTRKGFSLTQ*PVLTHP Trigger: GGGGTGTGTCAGGACCGGGCACTGGGTGAGGCTAAA...GCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CCA 90 bp | TTTAGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGATCGGAGCGCAAGGGCTaGGTCCCCCAAGGAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: FSLTQCPVLTHPSTTRRGSERKG*VPQGDP Trigger: GGGGTCTCCTTGGGGGACCCAGCCCTTGCGCTCCGA...TCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCTAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR TCA 90 bp | AGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGGCGCTGGGCGTAGGTaGTCACCCTTTTCCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLTQCPVLTHPSTTRRGRGAGRR*SPFSSW Trigger: CCAAGAGGAAAAGGGTGATCACCTACGCCCAGCGCC...CCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR TCA 90 bp | TTTAGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGACCCAGTGCCCGGTCCTaGCACACCCCAGCACTACCA | + |
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Preference number: 4 (lower is better) Translates to: FSLTQCPVLTHPSTTRRGPSARS*HTPALP Trigger: TGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGG...TCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCTAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR GCA 90 bp | CACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCAGAGCTTCGGCTTGGCCCTaGCTCTCATCGGTTTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: HPVPGPDTPQHYQTRKGRASAWP*LSSVFR Trigger: GCGGAAAACCGATGAGAGGCAGGGCCAAGCCGAAGC...TCTGCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR GCA 90 bp | TTTAGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAGGCCAGGGACAGGTCTaGGACGAAGTCCAGCACCGT | + |
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Preference number: 4 (lower is better) Translates to: FSLTQCPVLTHPSTTRRGGQGQV*DEVQHR Trigger: ACGGTGCTGGACTTCGTCGCAGACCTGTCCCTGGCC...TCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCTAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CCA 90 bp | CCCTTTAGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGCCATCGCTTCGGCTTaGCCCTGCCTCTCATCGGTT | + |
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Preference number: 4 (lower is better) Translates to: PFSLTQCPVLTHPSTTRRAIASA*PCLSSV Trigger: AACCGATGAGAGGCAGGGCCAAGCCGAAGCGATGGC...TCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCTAAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CCA 90 bp | CACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCAGATCTTCTCCGTCCCCCTaGTCCACTTCGCACTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: HPVPGPDTPQHYQTRKGRSSPSP*STSHSS Trigger: AGAGGAGTGCGAAGTGGACCAGGGGGACGGAGAAGA...TCTGCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CCA 90 bp | CCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCTCTCGTAAGCAAACGTaGGCACCTTCCTCCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PHPVPGPDTPQHYQTRKGSRKQT*APSSAA Trigger: AGCTGCGGAGGAAGGTGCCCACGTTTGCTTACGAGA...GCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CCA 90 bp | CTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCAGCACTCCTCTTCTTCTaGGTCCCCCTCTTCAAACCG | + |
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Preference number: 4 (lower is better) Translates to: LTQCPVLTHPSTTRRGRAALLFF*VPLFKP Trigger: CGGTTTGAAGAGGGGGACCCAGAAGAAGAGGAGTGC...TGCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CCA 90 bp | CCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCTCACCCTTTTCCTCTTaGGGCGGCCTAATAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PHPVPGPDTPQHYQTRKGSPFSS*GGLIGR Trigger: TCTCCCTATTAGGCCGCCCCAAGAGGAAAAGGGTGA...GCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR TCA 90 bp | CTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCACCAAGAGCTCGGTCATaGAGGAGATATAGACGATGG | + |
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Preference number: 4 (lower is better) Translates to: LTQCPVLTHPSTTRRGRAPRARS*RRYRRW Trigger: CCATCGTCTATATCTCCTTCATGACCGAGCTCTTGG...TGCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS CCA 90 bp | AAACCGCGCCATCCTCCTGGGTCTTCCCTCTCGGAGCGCAAGGGCTaGGTCCCCCAAGGAGACCCCGGGTGCGAAGTCGCAGAGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: KPRHPPGSSLSERKG*VPQGDPGCEVAEER Trigger: CCTCTCCTCTGCGACTTCGCACCCGGGGTCTCCTTGGGGGACCCAGCCCTTGCGCTCCGAGAGGGAAGACCCAGGAGGATGGCGCGGTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CAA 90 bp | CTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCACGCCATCGCTTCGGCTaGGCCCTGCCTCTCATCGGT | + |
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Preference number: 5 (lower is better) Translates to: LTQCPVLTHPSTTRRGRARHRFG*ALPLIG Trigger: ACCGATGAGAGGCAGGGCCAAGCCGAAGCGATGGCG...TGCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CAA 90 bp | CCCTTTAGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGATTCCTTTCGCGGATGTaGGCGGCCTGGCGCTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PFSLTQCPVLTHPSTTRRFLSRM*AAWRWA Trigger: CGCCCAGCGCCAGGCCGCCAACATCCGCGAAAGGAA...TCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCTAAAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS GCA 90 bp | GAAGTCGCAGAGGAGAGGGCGTCTCGGGGAGGCCAGGGACAGGTCTaGGACGAAGTCCAGCACCGTAGTGTCCACGCAGCTCTCCGGATA | + |
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Preference number: 5 (lower is better) Translates to: EVAEERASRGGQGQV*DEVQHRSVHAALRI Trigger: TATCCGGAGAGCTGCGTGGACACTACGGTGCTGGACTTCGTCGCAGACCTGTCCCTGGCCTCCCCGAGACGCCCTCTCCTCTGCGACTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS TCA 90 bp | TCCGCTTCCTTTCGCGGATGTTGGCGGCCTGGCGCTGGGCGTAGGTaGTCACCCTTTTCCTCTTGGGGCGGCCTAATAGGGAGACACCTC | + |
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Preference number: 5 (lower is better) Translates to: SASFRGCWRPGAGRR*SPFSSWGGLIGRHL Trigger: GAGGTGTCTCCCTATTAGGCCGCCCCAAGAGGAAAAGGGTGATCACCTACGCCCAGCGCCAGGCCGCCAACATCCGCGAAAGGAAGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CAA 90 bp | CCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCATCACCCTTTTCCTCTaGGGGCGGCCTAATAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PHPVPGPDTPQHYQTRKGITLFL*GRPNRE Trigger: CTCCCTATTAGGCCGCCCCAAGAGGAAAAGGGTGAT...GCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CAA 90 bp | ACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGAAGGGCAGACAAGGCCTCGTTGAGGTaGAACATCCGCTTCCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: TQCPVLTHPSTTRRGRADKASLR*NIRFLS Trigger: CGAAAGGAAGCGGATGTTCAACCTCAACGAGGCCTT...GTCTGCCCTTCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS-3UTR CAA 90 bp | TTTAGCCTCACCCAGTGCCCGGTCCTGACACACCCCAGCACTACCAGACGAGGATGGTCAAAGGCCTCGTaGAGGTTGAACATCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: FSLTQCPVLTHPSTTRRGWSKAS*RLNIRF Trigger: GAAGCGGATGTTCAACCTCAACGAGGCCTTTGACCA...TCCTCGTCTGGTAGTGCTGGGGTGTGTCAGGACCGGGCACTGGGTGAGGCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS CCA 72 bp | CATCCTCCTGGGTCTTCCCTCTCGGAGCGCAAGGGCTaGGTCCCCCAAGGAGACCCCGGGTGCGAAGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: HPPGSSLSERKG*VPQGDPGCEVA Trigger: TGCGACTTCGCACCCGGGGTCTCCTTGGGGGACCCAGCCCTTGCGCTCCGAGAGGGAAGACCCAGGAGGATG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS GCA 72 bp | GAGGAGAGGGCGTCTCGGGGAGGCCAGGGACAGGTCTaGGACGAAGTCCAGCACCGTAGTGTCCACGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: EERASRGGQGQV*DEVQHRSVHAA Trigger: AGCTGCGTGGACACTACGGTGCTGGACTTCGTCGCAGACCTGTCCCTGGCCTCCCCGAGACGCCCTCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS CAA 72 bp | CACGCAGCTCTCCGGATAGGCCGCCATCGCTTCGGCTaGGCCCTGCCTCTCATCGGTTTTCCGCAGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: HAALRIGRHRFG*ALPLIGFPQGG Trigger: CCCTCCCTGCGGAAAACCGATGAGAGGCAGGGCCAAGCCGAAGCGATGGCGGCCTATCCGGAGAGCTGCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS CAA 90 bp | CGTAGTGTCCACGCAGCTCTCCGGATAGGCCGCCATCGCTTCGGCTaGGCCCTGCCTCTCATCGGTTTTCCGCAGGGAGGGGCGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RSVHAALRIGRHRFG*ALPLIGFPQGGARL Trigger: CAACCTCGCCCCTCCCTGCGGAAAACCGATGAGAGGCAGGGCCAAGCCGAAGCGATGGCGGCCTATCCGGAGAGCTGCGTGGACACTACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS CCA 72 bp | TCCGTCCCCCTGGTCCACTTCGCACTCCTCTTCTTCTaGGTCCCCCTCTTCAAACCGCGCCATCCTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SVPLVHFALLFF*VPLFKPRHPPG Trigger: CCCAGGAGGATGGCGCGGTTTGAAGAGGGGGACCCAGAAGAAGAGGAGTGCGAAGTGGACCAGGGGGACGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS TCA 72 bp | TTTCGCGGATGTTGGCGGCCTGGCGCTGGGCGTAGGTaGTCACCCTTTTCCTCTTGGGGCGGCCTAATAGGG | + |
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Preference number: 6 (lower is better) Translates to: FRGCWRPGAGRR*SPFSSWGGLIG Trigger: CCCTATTAGGCCGCCCCAAGAGGAAAAGGGTGATCACCTACGCCCAGCGCCAGGCCGCCAACATCCGCGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS CCA 72 bp | TCTCGATCCGGGACAGCCTTTTCTCGTAAGCAAACGTaGGCACCTTCCTCCGCAGCTGGTCAAAGGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: SRSGTAFSRKQT*APSSAAGQRPR Trigger: ACGAGGCCTTTGACCAGCTGCGGAGGAAGGTGCCCACGTTTGCTTACGAGAAAAGGCTGTCCCGGATCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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| CDS CAA 72 bp | GTGGGCACCTTCCTCCGCAGCTGGTCAAAGGCCTCGTaGAGGTTGAACATCCGCTTCCTTTCGCGGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: VGTFLRSWSKAS*RLNIRFLSRML Trigger: CAACATCCGCGAAAGGAAGCGGATGTTCAACCTCAACGAGGCCTTTGACCAGCTGCGGAGGAAGGTGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275461.3 |
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