RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FER (Homo sapiens)

Ensembl gene IDs: ENSG00000151422

Ensembl transcript IDs: ENST00000281092.9, ENST00000438717.6, ENST00000502752.1, ENST00000504143.6, ENST00000505323.1, ENST00000509035.5, ENST00000513676.5, ENST00000618353.1, ENST00000628534.1

Found 490 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCATGGCTCTGGGCACCTTTCCCTCGGCATTTGCTTCCAACTGTCTaGCATTTAAGAGCAGGCAGGCAAGTTTATTTCTACCAGGTCAAA +
Preference number: 1 (lower is better)
Translates to: AWLWAPFPRHLLPTV*HLRAGRQVYFYQVK
Trigger: TTTGACCTGGTAGAAATAAACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAAAGGTGCCCAGAGCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 90 bp CCTGCTTTGGCAGAGGTGAAAGCCAGCTGTGGTTGGAACATGTCCTaGAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTA +
Preference number: 1 (lower is better)
Translates to: PALAEVKASCGWNMS*KHGITNAVYSTNGV
Trigger: TACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGCTGGCTTTCACCTCTGCCAAAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR TCA 90 bp GAACAGAAATGGCCCATAAATATGCTCCTGGCCACTGGTCCACATTaGCAGTCTGATCATGTCACAGGATGCAACTGGGTAGCTGACATT +
Preference number: 1 (lower is better)
Translates to: EQKWPINMLLATGPH*QSDHVTGCNWVADI
Trigger: AATGTCAGCTACCCAGTTGCATCCTGTGACATGATCAGACTGTCAATGTGGACCAGTGGCCAGGAGCATATTTATGGGCCATTTCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 90 bp GAATTGCACCATGGTACCAGTCCTGTTCTGCCAAAGGCTTCTCACTaGTGGAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATT +
Preference number: 1 (lower is better)
Translates to: ELHHGTSPVLPKASH*WRSYQKVLKSPVQI
Trigger: AATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTCCATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTACCATGGTGCAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR GCA 90 bp AAATGGACCATAAATCGGCAAACCACAGCAGTGCTTTACTCAAAATaGTGCTTGCAGGTGGAATGTCTTTACCAGAAGTGCCTGAGGGCC +
Preference number: 1 (lower is better)
Translates to: KWTINRQTTAVLYSK*CLQVECLYQKCLRA
Trigger: GGCCCTCAGGCACTTCTGGTAAAGACATTCCACCTGCAAGCAGCATTTTGAGTAAAGCACTGCTGTGGTTTGCCGATTTATGGTCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 90 bp GACCTGATCATCCTGTCTCCACATCTAGGACTCCAACCAGGTCTTTaGATTCTAACCTGCATCCATCATGGGGCTTATCACATACTGAGT +
Preference number: 1 (lower is better)
Translates to: DLIILSPHLGLQPGL*ILTCIHHGAYHILS
Trigger: ACTCAGTATGTGATAAGCCCCATGATGGATGCAGGTTAGAATTCAAAGACCTGGTTGGAGTCCTAGATGTGGAGACAGGATGATCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 90 bp CTTTACTCAAAATGCTGCTTGCAGGTGGAATGTCTTTACCAGAAGTaGCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCATCTAT +
Preference number: 1 (lower is better)
Translates to: LYSKCCLQVECLYQK*LRAPLLLHHLKLIY
Trigger: ATAGATGAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACATTCCACCTGCAAGCAGCATTTTGAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 90 bp CTCCCAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTaGGTTAGGAAAATCTCTCAAGAGCTTCTACTGATAGTGTTAGTC +
Preference number: 1 (lower is better)
Translates to: LPGYLPGYLYSQKSC*VRKISQELLLIVLV
Trigger: GACTAACACTATCAGTAGAAGCTCTTGAGAGATTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 90 bp TGCCTCCCAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTaGTGCGTTAGGAAAATCTCTCAAGAGCTTCTACTGATAGTGTTA +
Preference number: 1 (lower is better)
Translates to: CLPGYLPGYLYSQKS*CVRKISQELLLIVL
Trigger: TAACACTATCAGTAGAAGCTCTTGAGAGATTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTGGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 90 bp GCATCATCCTGCCTTGGAATAACTGGTTCCTCCCTCTTTTGCATTTaGATCTGCTGCCTCAGCACCTTATTAAATATACTGAAGCCTATG +
Preference number: 1 (lower is better)
Translates to: ASSCLGITGSSLFCI*ICCLSTLLNILKPM
Trigger: CATAGGCTTCAGTATATTTAATAAGGTGCTGAGGCAGCAGATTCAAATGCAAAAGAGGGAGGAACCAGTTATTCCAAGGCAGGATGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 90 bp CTCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTaGTATCTGTCCTATACTTTCAAAAGAAGGTATGATCTTCTGGGA +
Preference number: 1 (lower is better)
Translates to: LLHLSCVAQNADVSH*YLSYTFKRRYDLLG
Trigger: TCCCAGAAGATCATACCTTCTTTTGAAAGTATAGGACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 90 bp CTTTTTGCTCTAGTAATTCCTTCTGTGCTGAAAACTTTGCTTCAGTaGATCTCAGCTGCTGGACTGACTGTTTCAGTTCTTCAAGTGCCT +
Preference number: 1 (lower is better)
Translates to: LFALVIPSVLKTLLQ*ISAAGLTVSVLQVP
Trigger: AGGCACTTGAAGAACTGAAACAGTCAGTCCAGCAGCTGAGATGCACTGAAGCAAAGTTTTCAGCACAGAAGGAATTACTAGAGCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR TCA 90 bp TTATTGCCCACATTAAATTTGGGAGATAAAAGAGAAACAATTACATaGGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGG +
Preference number: 1 (lower is better)
Translates to: LLPTLNLGDKRETIT*DLSLETSHWRPHGR
Trigger: CCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCATGTAATTGTTTCTCTTTTATCTCCCAAATTTAATGTGGGCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CCA 90 bp CCTGTGCTTTTCTATTTGCAATGGCCTGAAATGGTAGGATTGCTATaGTTAGCTAAGAAAGCCCTTGGTAGGACTGCCTATTTCTTTAAC +
Preference number: 1 (lower is better)
Translates to: PVLFYLQWPEMVGLL*LAKKALGRTAYFFN
Trigger: GTTAAAGAAATAGGCAGTCCTACCAAGGGCTTTCTTAGCTAACCATAGCAATCCTACCATTTCAGGCCATTGCAAATAGAAAAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR TCA 90 bp AGTATTCTCTGCACCTCATGTGGCAGATGTTCAAGAAAAACTTTCTaGATGAATACAGCTGAGCGAAAACATAACATTCCACTTCCAGCA +
Preference number: 1 (lower is better)
Translates to: SILCTSCGRCSRKTF*MNTAERKHNIPLPA
Trigger: TGCTGGAAGTGGAATGTTATGTTTTCGCTCAGCTGTATTCATTCAGAAAGTTTTTCTTGAACATCTGCCACATGAGGTGCAGAGAATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 90 bp CTAAGGTGGAATTATGACAAGTTATTTTCTGTTGGACTGGTCTTCTaGTTGTTACTGAAGCAAAGCAATTCACATTGGCATGGCATGGGA +
Preference number: 1 (lower is better)
Translates to: LRWNYDKLFSVGLVF*LLLKQSNSHWHGMG
Trigger: TCCCATGCCATGCCAATGTGAATTGCTTTGCTTCAGTAACAATCAGAAGACCAGTCCAACAGAAAATAACTTGTCATAATTCCACCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 90 bp GCTTCCAGAACATATTTAGCCCTGAGCATGACCATCTTCTATATATaGATTTATCCTGAGAGGCAACTATATACAGATCATGGGGTAAGT +
Preference number: 1 (lower is better)
Translates to: ASRTYLALSMTIFYI*IYPERQLYTDHGVS
Trigger: ACTTACCCCATGATCTGTATATAGTTGCCTCTCAGGATAAATGCATATATAGAAGATGGTCATGCTCAGGGCTAAATATGTTCTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 90 bp CTGTACACTGCAGGTATGAGAGGTCTAGAATCTAAGGTGGAATTATaGCAAGTTATTTTCTGTTGGACTGGTCTTCTGATTGTTACTGAA +
Preference number: 1 (lower is better)
Translates to: LYTAGMRGLESKVEL*QVIFCWTGLLIVTE
Trigger: TTCAGTAACAATCAGAAGACCAGTCCAACAGAAAATAACTTGTCATAATTCCACCTTAGATTCTAGACCTCTCATACCTGCAGTGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 90 bp GAGCCCAGTGCAGATTTTGGAGACCTAATTATTCCAGCAATTGAATaGCGAATAGATTCAAATTTGGATAGCCTCTCCTTTCTTTCCATA +
Preference number: 1 (lower is better)
Translates to: EPSADFGDLIIPAIE*RIDSNLDSLSFLSI
Trigger: TATGGAAAGAAAGGAGAGGCTATCCAAATTTGAATCTATTCGTCATTCAATTGCTGGAATAATTAGGTCTCCAAAATCTGCACTGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR CCA 90 bp CCCACTGATATCTGTCCTATACTTTCAAAAGAAGGTATGATCTTCTaGGATCAGATGAATTGCTTAAGTGGTTACAGTTTTTGCAAGGGT +
Preference number: 1 (lower is better)
Translates to: PTDICPILSKEGMIF*DQMNCLSGYSFCKG
Trigger: ACCCTTGCAAAAACTGTAACCACTTAAGCAATTCATCTGATCCCAGAAGATCATACCTTCTTTTGAAAGTATAGGACAGATATCAGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 90 bp CCTATACTTTCAAAAGAAGGTATGATCTTCTGGGATCAGATGAATTaGTTAAGTGGTTACAGTTTTTGCAAGGGTGTTCTAACTGATGAC +
Preference number: 1 (lower is better)
Translates to: PILSKEGMIFWDQMN*LSGYSFCKGVLTDD
Trigger: GTCATCAGTTAGAACACCCTTGCAAAAACTGTAACCACTTAAGCAATTCATCTGATCCCAGAAGATCATACCTTCTTTTGAAAGTATAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CCA 90 bp TCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTaGGCATGGATTAGCCTCCTAAAGTATATAATTCCAATAATTAAT +
Preference number: 1 (lower is better)
Translates to: SLHQLAHSEQYVRAS*AWISLLKYIIPIIN
Trigger: ATTAATTATTGGAATTATATACTTTAGGAGGCTAATCCATGCCCAGGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CCA 90 bp CATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTGGGCATaGATTAGCCTCCTAAAGTATATAATTCCAATAATTAATTATCAG +
Preference number: 1 (lower is better)
Translates to: HQLAHSEQYVRASWA*ISLLKYIIPIINYQ
Trigger: CTGATAATTAATTATTGGAATTATATACTTTAGGAGGCTAATCCATGCCCAGGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCCGGCCTCTAAGGCTCTaGATCCAGGTTAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLRPLRL*IQVRGL
Trigger: CAGACCTCTAACCTGGATTCAGAGCCTTAGAGGCCG...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTCCTTGGTGGTGTGTGTaGACGCGCATGTACACACGT +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVPWWCV*TRMYTR
Trigger: ACGTGTGTACATGCGCGTGCACACACACCACCAAGG...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTCAGAGTCCTGAAGGCTaGGTTTGGCGCCATCCTGTC +
Preference number: 2 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSQSPEG*VWRHPV
Trigger: GACAGGATGGCGCCAAACTCAGCCTTCAGGACTCTG...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR-3UTR TCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCTCCCTCTTTTGCATTTaGATCTGCTGCCTCAGCACC +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLSLFCI*ICCLST
Trigger: GGTGCTGAGGCAGCAGATTCAAATGCAAAAGAGGGA...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCAACCACCGTTGTGTCTaGGGCCTCACAGATAAACAG +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLNHRCV*GLTDKQ
Trigger: CTGTTTATCTGTGAGGCCTCAGACACAACGGTGGTT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTAAAAGCACGGACCAATaGGGTGGGAAAGACTGCCAG +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVKSTDQ*GGKDCQ
Trigger: CTGGCAGTCTTTCCCACCTCATTGGTCCGTGCTTTT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCAAGTCCTATCAAGCATaGCTCTGGGCACCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLKSYQA*LWAPFP
Trigger: AGGGAAAGGTGCCCAGAGCCATGCTTGATAGGACTT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 90 bp ACCATAAATCGGCAAACCACAGCAGTGCTTTACTCAAAATGCTGCTaGCAGGTGGAATGTCTTTACCAGAAGTGCCTGAGGGCCCCACTC +
Preference number: 2 (lower is better)
Translates to: TINRQTTAVLYSKCC*QVECLYQKCLRAPL
Trigger: GAGTGGGGCCCTCAGGCACTTCTGGTAAAGACATTCCACCTGCAAGCAGCATTTTGAGTAAAGCACTGCTGTGGTTTGCCGATTTATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACAGAGTCCTGAAGGCTaGGTTTGGCGCCATCCTGTC +
Preference number: 2 (lower is better)
Translates to: AVVGTCPANMALPMLFIAQSPEG*VWRHPV
Trigger: GACAGGATGGCGCCAAACTCAGCCTTCAGGACTCTG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR-3UTR TCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGCTATTTGCAATGGCCTaGAATGGTAGGATTGCTATG +
Preference number: 2 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLLFAMA*NGRIAM
Trigger: CATAGCAATCCTACCATTTCAGGCCATTGCAAATAG...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTGTCTTGCACCTTGGTaGTGTGTGTGCACGCGCATG +
Preference number: 2 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSCLAPW*CVCTRM
Trigger: CATGCGCGTGCACACACACCACCAAGGTGCAAGACA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTCTGGAGACCTCTCACTaGAGACCTCATGGCAGGACA +
Preference number: 2 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICLETSH*RPHGRT
Trigger: TGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAG...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 90 bp TCAAAGTCCTATCAAGCATGGCTCTGGGCACCTTTCCCTCGGCATTaGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTAT +
Preference number: 2 (lower is better)
Translates to: SKSYQAWLWAPFPRH*LPTVWHLRAGRQVY
Trigger: ATAAACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAAAGGTGCCCAGAGCCATGCTTGATAGGACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCTGCAAAAGCAAGTCTTaGGATGACTCAGCACTAACC +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLCKSKS*DDSALT
Trigger: GGTTAGTGCTGAGTCATCGCAAGACTTGCTTTTGCA...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTGGGGGTGCATCATCCTaGCTTGGAATAACTGGTTCC +
Preference number: 2 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICGGASS*LGITGS
Trigger: GGAACCAGTTATTCCAAGGCAGGATGATGCACCCCC...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCGATCATGTCACAGGATaGAACTGGGTAGCTGACATT +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLDHVTG*NWVADI
Trigger: AATGTCAGCTACCCAGTTGCATCCTGTGACATGATC...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGATGGTAGGATTGCTATaGTTAGCTAAGAAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLMVGLL*LAKKAL
Trigger: AAGGGCTTTCTTAGCTAACCATAGCAATCCTACCAT...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCTATGTTCGTGCTTCCTaGGCATGGATTAGCCTCCTA +
Preference number: 2 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLYVRAS*AWISLL
Trigger: TAGGAGGCTAATCCATGCCCAGGAAGCACGAACATA...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTCTCTCTGTACATCCTTaGAAAGCAACTGCCTCAACT +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVLSVHP*KATAST
Trigger: AGTTGAGGCAGTTGCTTTTCAAGGATGTACAGAGAG...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTGCTGAGAGCTTAGCATaGAGCCACTATGAGATGGGA +
Preference number: 2 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSAESLA*SHYEMG
Trigger: TCCCATCTCATAGTGGCTTCATGCTAAGCTCTCAGC...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTGCACACAATCATCTCTaGGCTGGGAATATAACAGTG +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVAHNHL*AGNITV
Trigger: CACTGTTATATTCCCAGCTCAGAGATGATTGTGTGC...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp GGGAATTGCACCATGGTACCAGTCCTGTTCTGCCAAAGGCTTCTCACTGATGGAAGCATCTGCTGTGTTTaGATAAGTTCTTCCGCTAAC +
Preference number: 2 (lower is better)
Translates to: GNCTMVPVLFCQRLLTDGSICCV*ISSSAN
Trigger: GTTAGCGGAAGAACTTATGCAAACACAGCAGATGCT...TCCATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTACCATGGTGCAATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR CCA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTGTCTGTGGCATAGGATaGCAGCCTACAAACTGTGCC +
Preference number: 2 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFVCGIG*QPTNCA
Trigger: GGCACAGTTTGTAGGCTGCCATCCTATGCCACAGAC...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAGTCTGTGGCATAGGATaGCAGCCTACAAACTGTGCC +
Preference number: 2 (lower is better)
Translates to: AVVGTCPANMALPMLFIAVCGIG*QPTNCA
Trigger: GGCACAGTTTGTAGGCTGCCATCCTATGCCACAGAC...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTATGCCCCCTCTAAGGTaGAAATGCTTAACTGAAAGT +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVMPPLR*KCLTES
Trigger: ACTTTCAGTTAAGCATTTTCACCTTAGAGGGGGCAT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAAGCATGAAGCCACTATaGGATGGGAGGCTGTTTTCT +
Preference number: 2 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKSMKPL*DGRLFS
Trigger: AGAAAACAGCCTCCCATCTCATAGTGGCTTCATGCT...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGATGCTGTTATTTCTGTaGATTTGTGCTTTGCAGTTT +
Preference number: 2 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLMLLFL*ICALQF
Trigger: AAACTGCAAAGCACAAATCCACAGAAATAACAGCAT...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCAAGGAAATTACATTTTaGAATGCCCCCTCTAAGGTG +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLKEITF*NAPSKV
Trigger: CACCTTAGAGGGGGCATTCCAAAATGTAATTTCCTT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTCTAAAGTACTGGTGTaGGTTCTGTGCGATGGTACA +
Preference number: 2 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSSKVLV*VLCDGT
Trigger: TGTACCATCGCACAGAACTCACACCAGTACTTTAGA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCTTTTACTCTTACTTTTaGAGGTTGGTAAGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLFYSYF*RLVSAS
Trigger: TGAGGCACTTACCAACCTTCAAAAGTAAGAGTAAAA...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTCTTCCATTTCTCTGTTaGATACTATGTTTCCCCACA +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVLPFLC*ILCFPT
Trigger: TGTGGGGAAACATAGTATTCAACAGAGAAATGGAAG...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCATCTCAGCTGCTGGACTaGCTGTTTCAGTTCTTCAAG +
Preference number: 2 (lower is better)
Translates to: AVVGTCPANMALPMLFIASQLLD*LFQFFK
Trigger: CTTGAAGAACTGAAACAGTCAGTCCAGCAGCTGAGA...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR GCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTCCTTGAAAAGCAACTaGCTCAACTCTAACTTTGAC +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVSLKSN*LNSNFD
Trigger: GTCAAAGTTAGAGTTGAGGCAGTTGCTTTTCAAGGA...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCTTCAAATCTGTTTCTTaGTTCACAGCTCTCTGTACA +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLFKSVS*FTALCT
Trigger: TGTACAGAGAGCTGTGAAGCAAGAAACAGATTTGAA...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCTATTTTCATGCAATGTaGTCTGGGGTCTGTATTTCT +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLYFHAM*SGVCIS
Trigger: AGAAATACAGACCCCAGAGCACATTGCATGAAAATA...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCCTTTTCTATTTGCAATaGCCTGAAATGGTAGGATTG +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLLFYLQ*PEMVGL
Trigger: CAATCCTACCATTTCAGGCCATTGCAAATAGAAAAG...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp CTGATGGAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACAAAGCCAGCTGTGGTTaGAACATGTCCTGCAAACAT +
Preference number: 2 (lower is better)
Translates to: LMEIISESAEEPSADFGDKASCG*NMSCKH
Trigger: ATGTTTGCAGGACATGTTCCAACCACAGCTGGCTTT...GTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTCCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR CCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCACTTCAAAAGATGCATaGCCATTAAACAGTGTACAC +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLTSKDA*PLNSVH
Trigger: GTGTACACTGTTTAATGGCCATGCATCTTTTGAAGT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCGATGAATTGCTTAAGTaGTTACAGTTTTTGCAAGGG +
Preference number: 2 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLDELLK*LQFLQG
Trigger: CCCTTGCAAAAACTGTAACCACTTAAGCAATTCATC...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 90 bp TGGGGGTGCATCATCCTGCCTTGGAATAACTGGTTCCTCCCTCTTTaGCATTTGAATCTGCTGCCTCAGCACCTTATTAAATATACTGAA +
Preference number: 2 (lower is better)
Translates to: WGCIILPWNNWFLPL*HLNLLPQHLIKYTE
Trigger: TTCAGTATATTTAATAAGGTGCTGAGGCAGCAGATTCAAATGCAAAAGAGGGAGGAACCAGTTATTCCAAGGCAGGATGATGCACCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCACCAGGACACAGGCCTaGGAACTTATAAAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASTRTQA*ELIKGF
Trigger: GAAGCCTTTTATAAGTTCTCAGGCCTGTGTCCTGGT...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTCAAGAAAAACTTTCTaGATGAATACAGCTGAGCGA +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVSRKTF*MNTAER
Trigger: TCGCTCAGCTGTATTCATTCAGAAAGTTTTTCTTGA...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTCCAAAGGCTTCTCACTaGTGGAGATCATATCAGAAA +
Preference number: 2 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSPKASH*WRSYQK
Trigger: TTTCTGATATGATCTCCATCAGTGAGAAGCCTTTGG...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTGAGGAAATCACCTCCTaGAACCAGTTCCATAATGAT +
Preference number: 2 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSEEITS*NQFHND
Trigger: ATCATTATGGAACTGGTTTCAGGAGGTGATTTCCTC...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR GCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAGTGTGGCTTCCTAAATaGAAAAGCAAGTCTTGCGAT +
Preference number: 2 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKVWLPK*KSKSCD
Trigger: ATCGCAAGACTTGCTTTTGCATTTAGGAAGCCACAC...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTTGTCTGTCTCTCTGCTaGTTATTTTGCACTGTTCTG +
Preference number: 2 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICCLSLC*LFCTVL
Trigger: CAGAACAGTGCAAAATAAGCAGCAGAGAGACAGACA...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTAAATTTGCTGACAAGTaGGAAGCTAAATCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVKFADK*EAKSVF
Trigger: GAAGACAGATTTAGCTTCCCACTTGTCAGCAAATTT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTGAAGGTATGATCTTCTaGGATCAGATGAATTGCTTA +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVEGMIF*DQMNCL
Trigger: TAAGCAATTCATCTGATCCCAGAAGATCATACCTTC...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTCTGAGTTTGCGCTTTaGTTTACCATAGTACGTGCC +
Preference number: 2 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASSEFAL*FTIVRA
Trigger: GGCACGTACTATGGTAAATCAAAGCGCAAACTCAGA...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTACCATCTTCTATATATaGATTTATCCTGAGAGGCAA +
Preference number: 2 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVTIFYI*IYPERQ
Trigger: TTGCCTCTCAGGATAAATGCATATATAGAAGATGGT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTATTTACTACTGGAGGTaGCTCTTTCCCATCATTTTC +
Preference number: 2 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSIYYWR*LFPIIF
Trigger: GAAAATGATGGGAAAGAGCCACCTCCAGTAGTAAAT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR CAA 90 bp TGCATCATCCTGCCTTGGAATAACTGGTTCCTCCCTCTTTTGCATTaGAATCTGCTGCCTCAGCACCTTATTAAATATACTGAAGCCTAT +
Preference number: 2 (lower is better)
Translates to: CIILPWNNWFLPLLH*NLLPQHLIKYTEAY
Trigger: ATAGGCTTCAGTATATTTAATAAGGTGCTGAGGCAGCAGATTCAAATGCAAAAGAGGGAGGAACCAGTTATTCCAAGGCAGGATGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTACCCCTTAGTGACCAGTaGGACACAGACTGCTTGTGT +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLPLSDQ*DTDCLC
Trigger: ACACAAGCAGTCTGTGTCTCACTGGTCACTAAGGGG...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCGGTTGGAACATGTCCTaGAAACATGGCATTACCAAT +
Preference number: 2 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASGWNMS*KHGITN
Trigger: ATTGGTAATGCCATGTTTGCAGGACATGTTCCAACC...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTATTTCCACACTCTGTGTaGGGGTGCATCATCCTGCCT +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLFPHSV*GCIILP
Trigger: AGGCAGGATGATGCACCCCCACACAGAGTGTGGAAA...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 90 bp CACAGGATTTTGTACATTTCTGAATCTTCCTTTCCCTACATCAACTaGCACATTCTGAACAGTATGTTCGTGCTTCCTGGGCATGGATTA +
Preference number: 2 (lower is better)
Translates to: HRILYISESSFPYIN*HILNSMFVLPGHGL
Trigger: TAATCCATGCCCAGGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGATTCAGAAATGTACAAAATCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTGGTGAACTAGAATCATaGAATTCTGACAGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFGELES*NSDSSK
Trigger: TTTAGAGCTGTCAGAATTTCATGATTCTAGTTCACC...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp GAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCTAATTGCAGCCGTTGTTCTGTaGACATCTATGAAATTATTG +
Preference number: 2 (lower is better)
Translates to: EIISESAEEPSADFGDLIAAVVL*TSMKLL
Trigger: CAATAATTTCATAGATGTTCACAGAACAACGGCTGC...AATTAGGTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR GCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTTTGACGACGTTTCATaGGTTGTGTGTGTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASFDDVS*VVCVFL
Trigger: AAGAAACACACACACAACGCATGAAACGTCGTCAAA...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR GCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTATTTCTGTGGATTTGTaGTTTGCAGTTTCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICISVDL*FAVSLK
Trigger: TTTGAGAGAAACTGCAAAGCACAAATCCACAGAAAT...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAGTGAGTTCTGTGCGATaGTACAGGCAGCAAACAGCT +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLVSSVR*YRQQTA
Trigger: AGCTGTTTGCTGCCTGTACCATCGCACAGAACTCAC...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAATTTATTGTTGGCTATaGGTCATTTTACATTGGTGC +
Preference number: 2 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKIYCWL*VILHWC
Trigger: GCACCAATGTAAAATGACCCATAGCCAACAATAAAT...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp GAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCTAATTTTCATAATTTACTACTaGAGGTGGCTCTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: EIISESAEEPSADFGDLIFIIYY*RWLFPI
Trigger: GATGGGAAAGAGCCACCTCCAGTAGTAAATTATGAA...AATTAGGTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR CAA 90 bp GAAGATTCTTCAATTCTCTTCTCTAACTCCAAAACAGCCTCCTCCTaGTTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAAC +
Preference number: 2 (lower is better)
Translates to: EDSSILFSNSKTASS*FKSICCVCISSSAN
Trigger: GTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAACAAGGAGGAGGCTGTTTTGGAGTTAGAGAAGAGAATTGAAGAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR CCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTACTACAAGGTCCTCAGTaGGTGGCGTATGTTGTAACT +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLLQGPQ*VAYVVT
Trigger: AGTTACAACATACGCCACCCACTGAGGACCTTGTAG...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAACGTTAGTCCAAAGGTaGAATAGGGCGGATCTAAGT +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLTLVQR*NRADLS
Trigger: ACTTAGATCCGCCCTATTTCACCTTTGGACTAACGT...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 90 bp CATTTTTCAGACTTGTTTATAAAGCCAGATAAACCCGCCAAAGCCTaGTTTGTGTTTTACACTGAACTTTCCAGAAGAAGCACCCTATTT +
Preference number: 2 (lower is better)
Translates to: HFSDLFIKPDKPAKA*FVFYTELSRRSTLF
Trigger: AAATAGGGTGCTTCTTCTGGAAAGTTCAGTGTAAAACACAAACAAGGCTTTGGCGGGTTTATCTGGCTTTATAAACAAGTCTGAAAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTATCTCTGCACCTCATGTaGCAGATGTTCAAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLSLHLM*QMFKKN
Trigger: GTTTTTCTTGAACATCTGCCACATGAGGTGCAGAGA...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTGAAGCAGGGGAAGTGTaGTATCATAATACTGATTCT +
Preference number: 2 (lower is better)
Translates to: FKSICCVCISSSANVFNIEAGEV*YHNTDS
Trigger: AGAATCAGTATTATGATATCACACTTCCCCTGCTTC...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR GCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAGGAGATGACTGCTTTTaGTTTAGTTCTGCTGATCTT +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLGDDCF*FSSADL
Trigger: AAGATCAGCAGAACTAAAGCAAAAGCAGTCATCTCC...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTATCCCTCAAATGTTATTaGAGACAAGGAACATTGCTA +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLSLKCY*RQGTLL
Trigger: TAGCAATGTTCCTTGTCTTCAATAACATTTGAGGGA...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR TCA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTTGTTCAACCGACATTTaGATCTCTTTATGGACATTC +
Preference number: 2 (lower is better)
Translates to: FKSICCVCISSSANVFNICSTDI*ISLWTF
Trigger: GAATGTCCATAAAGAGATTCAAATGTCGGTTGAACA...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR GCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAGTCATTTTACATTGGTaGTTTGTTACTGCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLVILHW*FVTALH
Trigger: ATGAAGGGCAGTAACAAAGCACCAATGTAAAATGAC...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CCA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTCTTTTCTATTTGCAATaGCCTGAAATGGTAGGATTG +
Preference number: 2 (lower is better)
Translates to: FKSICCVCISSSANVFNILFYLQ*PEMVGL
Trigger: CAATCCTACCATTTCAGGCCATTGCAAATAGAAAAG...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR CCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAAATAGGTGTGGTGTTTaGCTTTTCAGGAAGAATACT +
Preference number: 2 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLNRCGV*LFRKNT
Trigger: AGTATTCTTCCTGAAAAGCCAAACACCACACCTATT...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCCATCTGTCTTGCACCTaGGTGGTGTGTGTGCACGCG +
Preference number: 3 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLHLSCT*VVCVHA
Trigger: CGCGTGCACACACACCACCAAGGTGCAAGACAGATG...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGGCTCTCTGTACATCCTaGAAAAGCAACTGCCTCAAC +
Preference number: 3 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLALCTS*KSNCLN
Trigger: GTTGAGGCAGTTGCTTTTCAAGGATGTACAGAGAGC...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTGAAAGCCAGCTGTGGTaGGAACATGTCCTGCAAACA +
Preference number: 3 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVESQLW*EHVLQT
Trigger: TGTTTGCAGGACATGTTCCAACCACAGCTGGCTTTC...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp TACTGCTTAGGGAGAGGGCTGAACCACCGTTGTGTCTaGGGCCTCACAGATAAACAGAGCAAGGGTAATTCT +
Preference number: 3 (lower is better)
Translates to: YCLGRGLNHRCV*GLTDKQSKGNS
Trigger: AGAATTACCCTTGCTCTGTTTATCTGTGAGGCCTCAGACACAACGGTGGTTCAGCCCTCTCCCTAAGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp TGGCCCATAAATATGCTCCTGGCCACTGGTCCACATTaGCAGTCTGATCATGTCACAGGATGCAACTGGGTA +
Preference number: 3 (lower is better)
Translates to: WPINMLLATGPH*QSDHVTGCNWV
Trigger: TACCCAGTTGCATCCTGTGACATGATCAGACTGTCAATGTGGACCAGTGGCCAGGAGCATATTTATGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 72 bp GGGAGGGTGTGGCTTCCTAAATGCAAAAGCAAGTCTTaGGATGACTCAGCACTAACCAGGGCAGCCAATTTT +
Preference number: 3 (lower is better)
Translates to: GRVWLPKCKSKS*DDSALTRAANF
Trigger: AAAATTGGCTGCCCTGGTTAGTGCTGAGTCATCGCAAGACTTGCTTTTGCATTTAGGAAGCCACACCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 72 bp AAATGCTGCTTGCAGGTGGAATGTCTTTACCAGAAGTaGCTGAGGGCCCCACTCCTACTCCATCATCTCAAA +
Preference number: 3 (lower is better)
Translates to: KCCLQVECLYQK*LRAPLLLHHLK
Trigger: TTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACATTCCACCTGCAAGCAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGTTTCCCTACATCAACTaGCACATTCTGAACAGTATG +
Preference number: 3 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLFPYIN*HILNSM
Trigger: CATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAA...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp CATGGTACCAGTCCTGTTCTGCCAAAGGCTTCTCACTaGTGGAGATCATATCAGAAAGTGCTGAAGAGCCCA +
Preference number: 3 (lower is better)
Translates to: HGTSPVLPKASH*WRSYQKVLKSP
Trigger: TGGGCTCTTCAGCACTTTCTGATATGATCTCCATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR TCA 72 bp GATTTTGGAAATATCCTCTGGACAGTGCTGGGGAGCTaGCATCCGGTATCCTCTTTCTACTTGCTCTCTTGC +
Preference number: 3 (lower is better)
Translates to: DFGNILWTVLGS*HPVSSFYLLSC
Trigger: GCAAGAGAGCAAGTAGAAAGAGGATACCGGATGTCAGCTCCCCAGCACTGTCCAGAGGATATTTCCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR GCA 72 bp GCAGAGGTGAAAGCCAGCTGTGGTTGGAACATGTCCTaGAAACATGGCATTACCAATGCTGTTTATAGCACC +
Preference number: 3 (lower is better)
Translates to: AEVKASCGWNMS*KHGITNAVYST
Trigger: GGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGCTGGCTTTCACCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR CCA 72 bp AATCCTGCTTTGGCAGAGGTGAAAGCCAGCTGTGGTTaGAACATGTCCTGCAAACATGGCATTACCAATGCT +
Preference number: 3 (lower is better)
Translates to: NPALAEVKASCG*NMSCKHGITNA
Trigger: AGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGCTGGCTTTCACCTCTGCCAAAGCAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR CCA 72 bp TGGGCACCTTTCCCTCGGCATTTGCTTCCAACTGTCTaGCATTTAAGAGCAGGCAGGCAAGTTTATTTCTAC +
Preference number: 3 (lower is better)
Translates to: WAPFPRHLLPTV*HLRAGRQVYFY
Trigger: GTAGAAATAAACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAAAGGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp CTGATGGAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACGAAAGCCAGCTGTGGTaGGAACATGTCCTGCAAACA +
Preference number: 3 (lower is better)
Translates to: LMEIISESAEEPSADFGDESQLW*EHVLQT
Trigger: TGTTTGCAGGACATGTTCCAACCACAGCTGGCTTTC...GTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTCCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTATTTGGTTTACTCTTaGCTAAGGCCCACACACTGG +
Preference number: 3 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVYLVYS*LRPTHW
Trigger: CCAGTGTGTGGGCCTTAGCAAAGAGTAAACCAAATA...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTACATTTATCCTGTGTaGCTCAGAACGCCGACGTTT +
Preference number: 3 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVYIYPV*LRTPTF
Trigger: AAACGTCGGCGTTCTGAGCAACACAGGATAAATGTA...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCCCTGTGCTTTTCTATTaGCAATGGCCTGAAATGGTA +
Preference number: 3 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLPVLFY*QWPEMV
Trigger: TACCATTTCAGGCCATTGCAAATAGAAAAGCACAGG...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTTGGTTCCTCCCTCTTTaGCATTTGAATCTGCTGCCT +
Preference number: 3 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICWFLPL*HLNLLP
Trigger: AGGCAGCAGATTCAAATGCAAAAGAGGGAGGAACCA...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp ATCCTGTCTCCACATCTAGGACTCCAACCAGGTCTTTaGATTCTAACCTGCATCCATCATGGGGCTTATCAC +
Preference number: 3 (lower is better)
Translates to: ILSPHLGLQPGL*ILTCIHHGAYH
Trigger: GTGATAAGCCCCATGATGGATGCAGGTTAGAATTCAAAGACCTGGTTGGAGTCCTAGATGTGGAGACAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CCA 72 bp CCAACCAGGTCTTTGAATTCTAACCTGCATCCATCATaGGGCTTATCACATACTGAGTGTGTAGCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: PTRSLNSNLHPS*GLSHTECVAGL
Trigger: AAGGCCAGCTACACACTCAGTATGTGATAAGCCCCATGATGGATGCAGGTTAGAATTCAAAGACCTGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTGCCTCAACTCTAACTTaGACGACGTTTCATGCGTTG +
Preference number: 3 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFASTLT*TTFHAL
Trigger: CAACGCATGAAACGTCGTCAAAGTTAGAGTTGAGGC...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp GCATCTTTTGTAAGGAGTCCAGAAGCAGGGGAAGTGTaGTATCATAATACTGATTCTGATGGAGCTGTGCCC +
Preference number: 3 (lower is better)
Translates to: ASFVRSPEAGEV*YHNTDSDGAVP
Trigger: GGGCACAGCTCCATCAGAATCAGTATTATGATATCACACTTCCCCTGCTTCTGGACTCCTTACAAAAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR GCA 72 bp GGATACCTCCCAGGATACCTCTACTCACAGAAATCTTaGTGCGTTAGGAAAATCTCTCAAGAGCTTCTACTG +
Preference number: 3 (lower is better)
Translates to: GYLPGYLYSQKS*CVRKISQELLL
Trigger: CAGTAGAAGCTCTTGAGAGATTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 72 bp TATTCTGGGAATTGCACCATGGTACCAGTCCTGTTCTaGCAAAGGCTTCTCACTGATGGAGATCATATCAGA +
Preference number: 3 (lower is better)
Translates to: YSGNCTMVPVLF*QRLLTDGDHIR
Trigger: TCTGATATGATCTCCATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTACCATGGTGCAATTCCCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR GCA 72 bp CACTTCATCATGATTTTGGAAATATCCTCTGGACAGTaGTGGGGAGCTGACATCCGGTATCCTCTTTCTACT +
Preference number: 3 (lower is better)
Translates to: HFIMILEISSGQ*WGADIRYPLST
Trigger: AGTAGAAAGAGGATACCGGATGTCAGCTCCCCAGCACTGTCCAGAGGATATTTCCAAAATCATGATGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR CAA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAAAATATAATCCTGCTTaGGCAGAGGTGAAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: AVVGTCPANMALPMLFIAKYNPA*AEVKAS
Trigger: GCTGGCTTTCACCTCTGCCAAAGCAGGATTATATTT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR-3UTR CAA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCAAGAGAAAGAATATGTaGGCTTTGGCCTTAGATTAC +
Preference number: 3 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLKRKNM*ALALDY
Trigger: GTAATCTAAGGCCAAAGCCAACATATTCTTTCTCTT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTGATGTCTCTTTCTTTTaGTGTCTTACCTTAGGCACC +
Preference number: 3 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICDVSFF*CLTLGT
Trigger: GGTGCCTAAGGTAAGACACAAAAAGAAAGAGACATC...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 72 bp ATAAATCGGCAAACCACAGCAGTGCTTTACTCAAAATaGTGCTTGCAGGTGGAATGTCTTTACCAGAAGTGC +
Preference number: 3 (lower is better)
Translates to: INRQTTAVLYSK*CLQVECLYQKC
Trigger: GCACTTCTGGTAAAGACATTCCACCTGCAAGCAGCATTTTGAGTAAAGCACTGCTGTGGTTTGCCGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTCCTGAAATGGTAGGATaGCTATGGTTAGCTAAGAAA +
Preference number: 3 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICPEMVG*LWLAKK
Trigger: TTTCTTAGCTAACCATAGCAATCCTACCATTTCAGG...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAGTTATTTCTGTGGATTaGTGCTTTGCAGTTTCTCTC +
Preference number: 3 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKVISVD*CFAVSL
Trigger: GAGAGAAACTGCAAAGCACAAATCCACAGAAATAAC...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTCTGAGAATCCATTTCTaGTCCTTAGGAATAGGATTC +
Preference number: 3 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSLRIHF*SLGIGF
Trigger: GAATCCTATTCCTAAGGACAAGAAATGGATTCTCAG...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR TCA 72 bp TGTTTGTTTACAAATATAATCCTGCTTTGGCAGAGGTaGAAGCCAGCTGTGGTTGGAACATGTCCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: CLFTNIILLWQR*KPAVVGTCPAN
Trigger: GTTTGCAGGACATGTTCCAACCACAGCTGGCTTTCACCTCTGCCAAAGCAGGATTATATTTGTAAACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR GCA 72 bp CTAGTAATTCCTTCTGTGCTGAAAACTTTGCTTCAGTaGATCTCAGCTGCTGGACTGACTGTTTCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: LVIPSVLKTLLQ*ISAAGLTVSVL
Trigger: AAGAACTGAAACAGTCAGTCCAGCAGCTGAGATGCACTGAAGCAAAGTTTTCAGCACAGAAGGAATTACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR CCA 72 bp TTCTATTTGCAATGGCCTGAAATGGTAGGATTGCTATaGTTAGCTAAGAAAGCCCTTGGTAGGACTGCCTAT +
Preference number: 3 (lower is better)
Translates to: FYLQWPEMVGLL*LAKKALGRTAY
Trigger: ATAGGCAGTCCTACCAAGGGCTTTCTTAGCTAACCATAGCAATCCTACCATTTCAGGCCATTGCAAATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR-3UTR CAA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCTGAAATGGTAGGATaGCTATGGTTAGCTAAGAAA +
Preference number: 3 (lower is better)
Translates to: AVVGTCPANMALPMLFIAPEMVG*LWLAKK
Trigger: TTTCTTAGCTAACCATAGCAATCCTACCATTTCAGG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR-3UTR CAA 90 bp CTGATGGAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCGAATAGATTCAAATTaGGATAGCCTCTCCTTTCTT +
Preference number: 3 (lower is better)
Translates to: LMEIISESAEEPSADFGDRIDSN*DSLSFL
Trigger: AAGAAAGGAGAGGCTATCCAAATTTGAATCTATTCG...GTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTCCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR CCA 72 bp CAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTaGGCATGGATTAGCCTCCTAAAGTATATAATTCCA +
Preference number: 3 (lower is better)
Translates to: QLAHSEQYVRAS*AWISLLKYIIP
Trigger: TGGAATTATATACTTTAGGAGGCTAATCCATGCCCAGGAAGCACGAACATACTGTTCAGAATGTGCAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp GAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCTAATTATGATGATTCTTACATaGGGCTTATACCTGGCAAGA +
Preference number: 3 (lower is better)
Translates to: EIISESAEEPSADFGDLIMMILT*GLYLAR
Trigger: TCTTGCCAGGTATAAGCCCAATGTAAGAATCATCAT...AATTAGGTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR-3UTR CAA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTATCTTCAGCACTCTGCTaGCATACCTGTCAGCTAATG +
Preference number: 3 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLSSALC*HTCQLM
Trigger: CATTAGCTGACAGGTATGCAAGCAGAGTGCTGAAGA...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp AAGGCTAGGGGCCCCCAAGTACCTGAGGAGAAACTTTaGTTGAAACCAATTACAACATTATTCAATATAAGC +
Preference number: 3 (lower is better)
Translates to: KARGPQVPEEKL*LKPITTLFNIS
Trigger: GCTTATATTGAATAATGTTGTAATTGGTTTCAATCAAAGTTTCTCCTCAGGTACTTGGGGGCCCCTAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 72 bp GTTACATTTTATTCACATGAGACATCTTCAGCACTCTaGTTGCATACCTGTCAGCTAATGGTAAGAATGTCC +
Preference number: 3 (lower is better)
Translates to: VTFYSHETSSAL*LHTCQLMVRMS
Trigger: GGACATTCTTACCATTAGCTGACAGGTATGCAAGCAGAGTGCTGAAGATGTCTCATGTGAATAAAATGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR GCA 72 bp CAAATACTGGAAAAACTAGCACCTGGTAGTATTCTCTaGACCTCATGTGGCAGATGTTCAAGAAAAACTTTC +
Preference number: 3 (lower is better)
Translates to: QILEKLAPGSIL*TSCGRCSRKTF
Trigger: GAAAGTTTTTCTTGAACATCTGCCACATGAGGTGCAGAGAATACTACCAGGTGCTAGTTTTTCCAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp TGCACCTCATGTGGCAGATGTTCAAGAAAAACTTTCTaGATGAATACAGCTGAGCGAAAACATAACATTCCA +
Preference number: 3 (lower is better)
Translates to: CTSCGRCSRKTF*MNTAERKHNIP
Trigger: TGGAATGTTATGTTTTCGCTCAGCTGTATTCATTCAGAAAGTTTTTCTTGAACATCTGCCACATGAGGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp CTTGTCCTTAGGAATAGGATTCAGCAGAACTACACCTaGTTTCTTAGTGATGACCTGTTTTGTTGTATAGTG +
Preference number: 3 (lower is better)
Translates to: LVLRNRIQQNYT*FLSDDLFCCIV
Trigger: CACTATACAACAAAACAGGTCATCACTAAGAAATCAGGTGTAGTTCTGCTGAATCCTATTCCTAAGGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR GCA 72 bp TGCATTTATTGTTGGCTATGGGTCATTTTACATTGGTaGTTTGTTACTGCCCTTCATTTCCTTTCAACCTTC +
Preference number: 3 (lower is better)
Translates to: CIYCWLWVILHW*FVTALHFLSTF
Trigger: GAAGGTTGAAAGGAAATGAAGGGCAGTAACAAAGCACCAATGTAAAATGACCCATAGCCAACAATAAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR TCA 72 bp TGTTGTATAGTGATGATCTATAAGTTGAGGAATGTTTaGAAACCCAGTGCCCTCGAATCGATACATGTTATC +
Preference number: 3 (lower is better)
Translates to: CCIVMIYKLRNV*KPSALESIHVI
Trigger: GATAACATGTATCGATTCGAGGGCACTGGGTTTTCAAACATTCCTCAACTTATAGATCATCACTATACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR GCA 72 bp TCAAAAGAAGGTATGATCTTCTGGGATCAGATGAATTaGTTAAGTGGTTACAGTTTTTGCAAGGGTGTTCTA +
Preference number: 3 (lower is better)
Translates to: SKEGMIFWDQMN*LSGYSFCKGVL
Trigger: TAGAACACCCTTGCAAAAACTGTAACCACTTAAGCAATTCATCTGATCCCAGAAGATCATACCTTCTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR-3UTR CAA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTATCAAACTCTATTTCTaGTTCTTTAGCAGCCGTTGT +
Preference number: 3 (lower is better)
Translates to: FKSICCVCISSSANVFNIIKLYF*FFSSRC
Trigger: ACAACGGCTGCTAAAGAACAAGAAATAGAGTTTGAT...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR GCA 72 bp ACATATTTAGCCCTGAGCATGACCATCTTCTATATATaGATTTATCCTGAGAGGCAACTATATACAGATCAT +
Preference number: 3 (lower is better)
Translates to: TYLALSMTIFYI*IYPERQLYTDH
Trigger: ATGATCTGTATATAGTTGCCTCTCAGGATAAATGCATATATAGAAGATGGTCATGCTCAGGGCTAAATATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CCA 72 bp ACATTCACTATTTCCTCTGTGACAAGACTGGTTATCTaGCTGTATTCATCAAATATACCTTTGAGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: TFTISSVTRLVI*LYSSNIPLSAF
Trigger: AAAAGCACTCAAAGGTATATTTGATGAATACAGCCAGATAACCAGTCTTGTCACAGAGGAAATAGTGAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
3UTR CCA 72 bp ATCTGTCCTATACTTTCAAAAGAAGGTATGATCTTCTaGGATCAGATGAATTGCTTAAGTGGTTACAGTTTT +
Preference number: 3 (lower is better)
Translates to: ICPILSKEGMIF*DQMNCLSGYSF
Trigger: AAAACTGTAACCACTTAAGCAATTCATCTGATCCCAGAAGATCATACCTTCTTTTGAAAGTATAGGACAGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGAAAAGCACGGACCAATaGGGTGGGAAAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLKSTDQ*GGKDCQ
Trigger: CTGGCAGTCTTTCCCACCTCATTGGTCCGTGCTTTT...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 72 bp TATCAAGCATGGCTCTGGGCACCTTTCCCTCGGCATTaGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YQAWLWAPFPRH*LPTVWHLRAGR
Trigger: CCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAAAGGTGCCCAGAGCCATGCTTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCCGGCCTCTAAGGCTCTaGATCCAGGTTAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLRPLRL*IQVRGL
Trigger: CAGACCTCTAACCTGGATTCAGAGCCTTAGAGGCCG...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGGGTTCTGCAGACACATaGGTGGTAACTGGTCTATTG +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLGSADT*VVTGLL
Trigger: CAATAGACCAGTTACCACTCATGTGTCTGCAGAACC...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGATTCTGATGGAGCTGTaGCCCTTTCAACGCCAATAC +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLILMEL*PFQRQY
Trigger: GTATTGGCGTTGAAAGGGGCACAGCTCCATCAGAAT...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGCATTCACATCTGTCTTaGACCTTGGTGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLHSHLS*TLVVCV
Trigger: CACACACACCACCAAGGTGCAAGACAGATGTGAATG...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGCGTGCTTCCTGGGCATaGATTAGCCTCCTAAAGTAT +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLRASWA*ISLLKY
Trigger: ATACTTTAGGAGGCTAATCCATGCCCAGGAAGCACG...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp CTGATGGAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCAGAGTCCTGAAGGCTaGGTTTGGCGCCATCCTGTC +
Preference number: 4 (lower is better)
Translates to: LMEIISESAEEPSADFGDQSPEG*VWRHPV
Trigger: GACAGGATGGCGCCAAACTCAGCCTTCAGGACTCTG...GTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTCCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTTTACCAGAAGTGCCTaGGGGCCCCACTCCTACTCC +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSFTRSA*GPHSYS
Trigger: GGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTCACGGACCAATGAGGTaGGAAAGACTGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICHGPMR*ERLPGW
Trigger: CCAGCCTGGCAGTCTTTCCCACCTCATTGGTCCGTG...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 72 bp CTGGCTATCCTAGACATATGTGTGCCATTACTCAGCTaGCTACTGCTTAGGGAGAGGGCTGAACCACCGTTG +
Preference number: 4 (lower is better)
Translates to: LAILDICVPLLS*LLLRERAEPPL
Trigger: CAACGGTGGTTCAGCCCTCTCCCTAAGCAGTAGCAAGCTGAGTAATGGCACACATATGTCTAGGATAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTGGGTCTGCTCTTCAGTaGTGGCCGTTTCTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSGSALQ*WPFLKR
Trigger: ACGCTTCAGAAACGGCCATCACTGAAGAGCAGACCC...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTACAGTGCTGGGGAGCTaGCATCCGGTATCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSTVLGS*HPVSSF
Trigger: GAAAGAGGATACCGGATGTCAGCTCCCCAGCACTGT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR TCA 90 bp CTGATGGAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACACAGTGCTGGGGAGCTaGCATCCGGTATCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LMEIISESAEEPSADFGDTVLGS*HPVSSF
Trigger: GAAAGAGGATACCGGATGTCAGCTCCCCAGCACTGT...GTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTCCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGTCAACTTGCACATTCTaGACAGTATGTTCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLSTCTF*TVCSCF
Trigger: GAAGCACGAACATACTGTTCAGAATGTGCAAGTTGA...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCAAGTCCTATCAAGCATaGCTCTGGGCACCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLKSYQA*LWAPFP
Trigger: AGGGAAAGGTGCCCAGAGCCATGCTTGATAGGACTT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCCATATCAGAAAGTGCTaGAGAGCCCAGTGCAGATTT +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLHIRKC*RAQCRF
Trigger: AAATCTGCACTGGGCTCTTCAGCACTTTCTGATATG...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCACCAGGACACAGGCCTaGGAACTTATAAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLTRTQA*ELIKGF
Trigger: GAAGCCTTTTATAAGTTCTCAGGCCTGTGTCCTGGT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACCCCTTAGTGACCAGTaGGACACAGACTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKPLSDQ*DTDCLC
Trigger: ACACAAGCAGTCTGTGTCTCACTGGTCACTAAGGGG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTAAGCAAGTCTTGCGATaGCTCAGCACTAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSKQVLR*LSTNQG
Trigger: GCCCTGGTTAGTGCTGAGTCATCGCAAGACTTGCTT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCATAATGGTTACCTCCTaGGATTATAGGGAGCGTAGG +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLIMVTS*DYRERR
Trigger: CCTACGCTCCCTATAATCTCAGGAGGTAACCATTAT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAGAACCCAAACGGGTCTaGTCTTCAGTGATGGCCGTT +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKEPKRV*SSVMAV
Trigger: AACGGCCATCACTGAAGAGCAGACCCGTTTGGGTTC...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCACACCAGGATTTTTCTaGCACCCAAGAATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLTPGFF*HPRISV
Trigger: GACTGAGATTCTTGGGTGGCAGAAAAATCCTGGTGT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAGGGGGTGCATCATCCTaGCTTGGAATAACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKGGASS*LGITGS
Trigger: GGAACCAGTTATTCCAAGGCAGGATGATGCACCCCC...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGACATATTCTGTACACTaGAGGTATGAGAGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLTYSVH*RYERSR
Trigger: TCTAGACCTCTCATACCTGCAGTGTACAGAATATGT...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCGGCAAACCACAGCAGTaGTTTACTCAAAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLGKPQQ*FTQNAA
Trigger: AGCAGCATTTTGAGTAAAGCACTGCTGTGGTTTGCC...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTTCCTCTGGACAGTGCTaGGGAGCTGACATCCGGTAT +
Preference number: 4 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFSSGQC*GADIRY
Trigger: ATACCGGATGTCAGCTCCCCAGCACTGTCCAGAGGA...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTCTACAAGGTCCTCAGTaGGTGGCGTATGTTGTAACT +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVLQGPQ*VAYVVT
Trigger: AGTTACAACATACGCCACCCACTGAGGACCTTGTAG...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTTTCCACACTCTGTGTaGGGGTGCATCATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSFPHSV*GCIILP
Trigger: AGGCAGGATGATGCACCCCCACACAGAGTGTGGAAA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTATCAAGCATGGCTCTaGGCACCTTTCCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSYQAWL*APFPRH
Trigger: ATGCCGAGGGAAAGGTGCCCAGAGCCATGCTTGATA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 72 bp CTGACTTCTAGACTGTCTACTTCATTCACATCTGTCTaGCACCTTGGTGGTGTGTGTGCACGCGCATGTACA +
Preference number: 4 (lower is better)
Translates to: LTSRLSTSFTSV*HLGGVCARACT
Trigger: TGTACATGCGCGTGCACACACACCACCAAGGTGCAAGACAGATGTGAATGAAGTAGACAGTCTAGAAGTCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTAGTGATGGCCGTTTCTaGAGCGTCCTTCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSSDGRF*SVLHQK
Trigger: CTTTTGGTGAAGGACGCTTCAGAAACGGCCATCACT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTTCACCAGGTTTCCCATaGCTCTCTCGCACCAAAAAG +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICSPGFP*LSRTKK
Trigger: CTTTTTGGTGCGAGAGAGTCATGGGAAACCTGGTGA...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCTCCTTCTCAGAAAGGTaGGGAAATCACCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLSFSER*GNHLLK
Trigger: TTTCAGGAGGTGATTTCCTCACCTTTCTGAGAAGGA...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGGGTGAACTAGAATCATaGAATTCTGACAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLGELES*NSDSSK
Trigger: TTTAGAGCTGTCAGAATTTCATGATTCTAGTTCACC...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTATTTCTGAATCGGTATaGGGCAGGAGGATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVISESV*GRRMAF
Trigger: AAAAGCCATCCTCCTGCCTCATACCGATTCAGAAAT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCGCACACAATCATCTCTaGGCTGGGAATATAACAGTG +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLAHNHL*AGNITV
Trigger: CACTGTTATATTCCCAGCTCAGAGATGATTGTGTGC...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGTCAAGAAAAACTTTCTaGATGAATACAGCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLSRKTF*MNTAER
Trigger: TCGCTCAGCTGTATTCATTCAGAAAGTTTTTCTTGA...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAGGGCTTATCACATACTaGGTGTGTAGCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKGLITY*VCSWPC
Trigger: ACAAGGCCAGCTACACACTCAGTATGTGATAAGCCC...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAATACTCAGCTTGCTACTaGTTAGGGAGAGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKYSACY*LGRGLN
Trigger: GTTCAGCCCTCTCCCTAAGCAGTAGCAAGCTGAGTA...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCAGAAGTCAGGGCTGTTaGTGGAACTTTGACAACTTG +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLRSQGC*WNFDNL
Trigger: CAAGTTGTCAAAGTTCCAGCAACAGCCCTGACTTCT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACTGGGAATTGCACCATaGTACCAGTCCTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIALGIAP*YQSCSA
Trigger: GGCAGAACAGGACTGGTACCATGGTGCAATTCCCAG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCAAAGCCAGCTGTGGTTaGAACATGTCCTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLKASCG*NMSCKH
Trigger: ATGTTTGCAGGACATGTTCCAACCACAGCTGGCTTT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTGTCTTGCACCTTGGTaGTGTGTGTGCACGCGCATG +
Preference number: 4 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASCLAPW*CVCTRM
Trigger: CATGCGCGTGCACACACACCACCAAGGTGCAAGACA...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACATGAGACCTTTCACTaGAGACCTCTCACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKHETFH*RPLTGD
Trigger: GTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCATG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCAACCTGCATCCATCATaGGGCTTATCACATACTGAG +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLNLHPS*GLSHTE
Trigger: CTCAGTATGTGATAAGCCCCATGATGGATGCAGGTT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCAAGAAGCTGTTTCAGTaGGAAACCTCAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLKKLFQ*ETSMLC
Trigger: ACAGAGCATTGAGGTTTCCCACTGAAACAGCTTCTT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCGGCTTTCAATTTGCTTaGATTCCTGAAGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLGFQFA*IPEEVR
Trigger: CCTGACTTCTTCAGGAATCCAAGCAAATTGAAAGCC...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTTCTGTGCTGAAAACTTTGCTTCAGTGCATCTCAGCTGCTGGACTGACTGTCATATCAGAAAGTGCTaGAGAGCCCAGTGCAGATTT +
Preference number: 4 (lower is better)
Translates to: SFCAENFASVHLSCWTDCHIRKC*RAQCRF
Trigger: AAATCTGCACTGGGCTCTTCAGCACTTTCTGATATG...ACAGTCAGTCCAGCAGCTGAGATGCACTGAAGCAAAGTTTTCAGCACAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTGAGGAAATCACCTCCTaGAACCAGTTCCATAATGAT +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVEEITS*NQFHND
Trigger: ATCATTATGGAACTGGTTTCAGGAGGTGATTTCCTC...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTAGCATGAAGCCACTATaGGATGGGAGGCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSSMKPL*DGRLFS
Trigger: AGAAAACAGCCTCCCATCTCATAGTGGCTTCATGCT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAAACCACCGTTGTGTCTaGGGCCTCACAGATAAACAG +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIANHRCV*GLTDKQ
Trigger: CTGTTTATCTGTGAGGCCTCAGACACAACGGTGGTT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTATTTGCTTGGATTCCTaGAGAAGTCAGGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSICLDS*RSQGCC
Trigger: GCAACAGCCCTGACTTCTTCAGGAATCCAAGCAAAT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTAACCTTGATCATCTCTaGCTCTATCTGCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVNLDHL*LYLLMN
Trigger: GTTCATCAGCAGATAGAGGCAGAGATGATCAAGGTT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCAGCATCTGCTGTGTTTaGATAAGTTCTTCCGCTAAC +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLSICCV*ISSSAN
Trigger: GTTAGCGGAAGAACTTATGCAAACACAGCAGATGCT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTGGTTGGAACATGTCCTaGAAACATGGCATTACCAAT +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVGWNMS*KHGITN
Trigger: ATTGGTAATGCCATGTTTGCAGGACATGTTCCAACC...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCGTGTGGCTTCCTAAATaGAAAAGCAAGTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLVWLPK*KSKSCD
Trigger: ATCGCAAGACTTGCTTTTGCATTTAGGAAGCCACAC...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCAAAGCCAGCAGAATTTaGACCACCACCAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASKASRI*TTTNPH
Trigger: GTGGGGGTTGGTGGTGGTGCAAATTCTGCTGGCTTT...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTGTGCATCTCAGCTGCTaGACTGACTGTTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSVHLSC*TDCFSS
Trigger: AGAACTGAAACAGTCAGTCCAGCAGCTGAGATGCAC...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTTATGTTCGTGCTTCCTaGGCATGGATTAGCCTCCTA +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICYVRAS*AWISLL
Trigger: TAGGAGGCTAATCCATGCCCAGGAAGCACGAACATA...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTTGCTTCCAACTGTCTaGCATTTAAGAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSLLPTV*HLRAGR
Trigger: CCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCACTTGGATACGTTGCTaGCATAATTCATTTGGACAG +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLTWIRC*HNSFGQ
Trigger: CTGTCCAAATGAATTATGTCAGCAACGTATCCAAGT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTGAAGCAGGGGAAGTGTaGTATCATAATACTGATTCT +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVEAGEV*YHNTDS
Trigger: AGAATCAGTATTATGATATCACACTTCCCCTGCTTC...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTTCTCAGCTGCTGGACTaGCTGTTTCAGTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFSQLLD*LFQFFK
Trigger: CTTGAAGAACTGAAACAGTCAGTCCAGCAGCTGAGA...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTCAGCAGAACTACACCTaGTTTCTTAGTGATGACCTG +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICQQNYT*FLSDDL
Trigger: CAGGTCATCACTAAGAAATCAGGTGTAGTTCTGCTG...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTTCTGTGCTGAAAACTTTGCTTCAGTGCATCTCAGCTGCTGGACTGACTGTGAGGAAATCACCTCCTaGAACCAGTTCCATAATGAT +
Preference number: 4 (lower is better)
Translates to: SFCAENFASVHLSCWTDCEEITS*NQFHND
Trigger: ATCATTATGGAACTGGTTTCAGGAGGTGATTTCCTC...ACAGTCAGTCCAGCAGCTGAGATGCACTGAAGCAAAGTTTTCAGCACAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGACAGTGCTGGGGAGCTaGCATCCGGTATCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKTVLGS*HPVSSF
Trigger: GAAAGAGGATACCGGATGTCAGCTCCCCAGCACTGT...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACATGGCAGGACAGGCTaGAATAAAGCTTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKHGRTG*NKASVS
Trigger: AGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAATCCACATTGACAGTCTaGTCATGTCACAGGATGCAA +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKSTLTV*SCHRMQ
Trigger: TTGCATCCTGTGACATGATCAGACTGTCAATGTGGA...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCGCCACTGGTCCACATTaGCAGTCTGATCATGTCACA +
Preference number: 4 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASATGPH*QSDHVT
Trigger: TGTGACATGATCAGACTGTCAATGTGGACCAGTGGC...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAATTCTGATGGAGCTGTaGCCCTTTCAACGCCAATAC +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAILMEL*PFQRQY
Trigger: GTATTGGCGTTGAAAGGGGCACAGCTCCATCAGAAT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCATCAGTGCATCTCAGCTaGTGGACTGACTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIASVHLS*WTDCFS
Trigger: ACTGAAACAGTCAGTCCAGCAGCTGAGATGCACTGA...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTAAAACTTTGCTTCAGTaGATCTCAGCTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSKTLLQ*ISAAGL
Trigger: CAGTCCAGCAGCTGAGATGCACTGAAGCAAAGTTTT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTTCTATTCTGGGAATTaGACCATGGTACCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSFYSGN*TMVPVL
Trigger: CAGGACTGGTACCATGGTGCAATTCCCAGAATAGAA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp TCTGTGACAAGACTGGTTATCTGGCTGTATTCATCAAATATACCTTTGAGTGCTATATCCTCTGGACAGTaGTGGGGAGCTGACATCCGG +
Preference number: 4 (lower is better)
Translates to: SVTRLVIWLYSSNIPLSAISSGQ*WGADIR
Trigger: CCGGATGTCAGCTCCCCAGCACTGTCCAGAGGATAT...AGCACTCAAAGGTATATTTGATGAATACAGCCAGATAACCAGTCTTGTCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR GCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCTCCTTGAAAAGCAACTaGCTCAACTCTAACTTTGAC +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLSLKSN*LNSNFD
Trigger: GTCAAAGTTAGAGTTGAGGCAGTTGCTTTTCAAGGA...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTTGCAAAAGCAAGTCTTaGGATGACTCAGCACTAACC +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICCKSKS*DDSALT
Trigger: GGTTAGTGCTGAGTCATCGCAAGACTTGCTTTTGCA...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTATACTTTCAGACATTTaGTGCCAAGAGGAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVILSDI*CQEECE
Trigger: TTCACACTCCTCTTGGCAGCAAATGTCTGAAAGTAT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCCTATATTCATTCAGATaGTCAATTGGGCCATCTAAC +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLLYSFR*SIGPSN
Trigger: GTTAGATGGCCCAATTGAGCATCTGAATGAATATAG...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACTTGAGCTTCTATTCTaGGAATTGCACCATGGTACC +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKLELLF*ELHHGT
Trigger: GGTACCATGGTGCAATTCCCAGAATAGAAGCTCAAG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTATGGTAGGATTGCTATaGTTAGCTAAGAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVMVGLL*LAKKAL
Trigger: AAGGGCTTTCTTAGCTAACCATAGCAATCCTACCAT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAATTTTGTGGGAGGGTGTaGCTTCCTAAATGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKFCGRV*LPKCKS
Trigger: GCTTTTGCATTTAGGAAGCCACACCCTCCCACAAAA...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTAGTAAGCTCCCTCTGTaGGTAACTCTAGGAGCCATT +
Preference number: 4 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFSKLPL*VTLGAI
Trigger: AATGGCTCCTAGAGTTACCCACAGAGGGAGCTTACT...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACAATTCACATTGGCATaGCATGGGATAGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKQFTLA*HGIDLH
Trigger: ATGGAGGTCTATCCCATGCCATGCCAATGTGAATTG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGCAGAGTCCTGAAGGCTaGGTTTGGCGCCATCCTGTC +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEQSPEG*VWRHPV
Trigger: GACAGGATGGCGCCAAACTCAGCCTTCAGGACTCTG...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCCAGAGTCCTGAAGGCTaGGTTTGGCGCCATCCTGTC +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESQSPEG*VWRHPV
Trigger: GACAGGATGGCGCCAAACTCAGCCTTCAGGACTCTG...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACTATTTGCAATGGCCTaGAATGGTAGGATTGCTATG +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKLFAMA*NGRIAM
Trigger: CATAGCAATCCTACCATTTCAGGCCATTGCAAATAG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTTCTAAAGTACTGGTGTaGGTTCTGTGCGATGGTACA +
Preference number: 4 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFSKVLV*VLCDGT
Trigger: TGTACCATCGCACAGAACTCACACCAGTACTTTAGA...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCCCTGAGGAGAAACTTTaGTTGAAACCAATTACAACA +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLPEEKL*LKPITT
Trigger: TGTTGTAATTGGTTTCAATCAAAGTTTCTCCTCAGG...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAGTTGGACTGGTCTTCTaGTTGTTACTGAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAVGLVF*LLLKQS
Trigger: GCTTTGCTTCAGTAACAATCAGAAGACCAGTCCAAC...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCATGGTTCTATGTCTATaGCTTTATACAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLMVLCL*LYTVFQ
Trigger: CTGGAACACTGTATAAAGTCATAGACATAGAACCAT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTCCTTGGATACGTTGCTaGCATAATTCATTTGGACAG +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSPWIRC*HNSFGQ
Trigger: CTGTCCAAATGAATTATGTCAGCAACGTATCCAAGG...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR GCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAAAAACTTTGCTTCAGTaGATCTCAGCTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAKTLLQ*ISAAGL
Trigger: CAGTCCAGCAGCTGAGATGCACTGAAGCAAAGTTTT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTTGTTTGAAAACCCAGTaGCCTCGAATCGATACATGT +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICCLKTQ*PRIDTC
Trigger: ACATGTATCGATTCGAGGGCACTGGGTTTTCAAACA...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGATATCCTCTGGACAGTaGTGGGGAGCTGACATCCGG +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLISSGQ*WGADIR
Trigger: CCGGATGTCAGCTCCCCAGCACTGTCCAGAGGATAT...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTGGTTGGAACATGTCCTaGAAACATGGCATTACCAAT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSGWNMS*KHGITN
Trigger: ATTGGTAATGCCATGTTTGCAGGACATGTTCCAACC...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCTTCAAATCTGTTTCTTaGTTCACAGCTCTCTGTACA +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLFKSVS*FTALCT
Trigger: TGTACAGAGAGCTGTGAAGCAAGAAACAGATTTGAA...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCATTTCTGTGGATTTGTaGTTTGCAGTTTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLISVDL*FAVSLK
Trigger: TTTGAGAGAAACTGCAAAGCACAAATCCACAGAAAT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCCTTGGTGGTGTGTGTaGACGCGCATGTACACACGT +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLPWWCV*TRMYTR
Trigger: ACGTGTGTACATGCGCGTGCACACACACCACCAAGG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCTGGGATCAGATGAATTaGTTAAGTGGTTACAGTTTT +
Preference number: 4 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLWDQMN*LSGYSF
Trigger: AAAACTGTAACCACTTAAGCAATTCATCTGATCCCA...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTAGTGGGAAACCTCAATaGTCTGTAAAGAATGATGAA +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVSGKPQ*SVKNDE
Trigger: TTCATCATTCTTTACAGAGCATTGAGGTTTCCCACT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTATGAAGTTTCATTGTaGCTTTGTCGTATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVYEVSL*LCRIVP
Trigger: AGGAACGATACGACAAAGCCACAATGAAACTTCATA...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCTGTGACAAGACTGGTTATCTGGCTGTATTCATCAAATATACCTTTGAGTGCTCTGGGAATTGCACCATaGTACCAGTCCTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SVTRLVIWLYSSNIPLSALGIAP*YQSCSA
Trigger: GGCAGAACAGGACTGGTACCATGGTGCAATTCCCAG...AGCACTCAAAGGTATATTTGATGAATACAGCCAGATAACCAGTCTTGTCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGGTCTGTGGCATAGGATaGCAGCCTACAAACTGTGCC +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKVCGIG*QPTNCA
Trigger: GGCACAGTTTGTAGGCTGCCATCCTATGCCACAGAC...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCTGGAGACCTCTCACTaGAGACCTCATGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLLETSH*RPHGRT
Trigger: TGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTCAATCATCTCTGAGCTaGGAATATAACAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSQSSLS*EYNSAP
Trigger: AGGAGCACTGTTATATTCCCAGCTCAGAGATGATTG...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TGTAGAGACTTAAGAGGCACGCACTGTTTAAGGACACACAGCAGGAAGCTCCTCAGAGTTTCATGTCTTTaGACACTTTGGTCATGGATT +
Preference number: 4 (lower is better)
Translates to: CRDLRGTHCLRTHSRKLLRVSCL*TLWSWI
Trigger: AATCCATGACCAAAGTGTCCAAAGACATGAAACTCT...GAGGAGCTTCCTGCTGTGTGTCCTTAAACAGTGCGTGCCTCTTAAGTCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCACAGTCAAATGAATaGCATGGGCACCATTTGTAC +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAPQSNE*HGHHLY
Trigger: GTACAAATGGTGCCCATGCCATTCATTTGACTGTGG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTCACTATTTCCTCTGTaGCAAGACTGGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASSLFPL*QDWLSG
Trigger: GCCAGATAACCAGTCTTGTCACAGAGGAAATAGTGA...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TATCATAATACTGATTCTGATGGAGCTGTGCCCCTTTCAACGCCAATACATACTTCTCAGCTGCTGGACTaGCTGTTTCAGTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: YHNTDSDGAVPLSTPIHTSQLLD*LFQFFK
Trigger: CTTGAAGAACTGAAACAGTCAGTCCAGCAGCTGAGA...AGTATGTATTGGCGTTGAAAGGGGCACAGCTCCATCAGAATCAGTATTATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAAAGGCTTCTCACTaGTGGAGATCATATCAGAAA +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAPKASH*WRSYQK
Trigger: TTTCTGATATGATCTCCATCAGTGAGAAGCCTTTGG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR TCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGTCACCAGGTTTCCCATaGCTCTCTCGCACCAAAAAG +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKSPGFP*LSRTKK
Trigger: CTTTTTGGTGCGAGAGAGTCATGGGAAACCTGGTGA...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp GAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCTAATTTCCTTCTCAGAAAGGTaGGGAAATCACCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: EIISESAEEPSADFGDLISFSER*GNHLLK
Trigger: TTTCAGGAGGTGATTTCCTCACCTTTCTGAGAAGGA...AATTAGGTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGGCTGAGAGCTTAGCATaGAGCCACTATGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKAESLA*SHYEMG
Trigger: TCCCATCTCATAGTGGCTTCATGCTAAGCTCTCAGC...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACACAGAGTAATGATGTaGACTGCAAATTCTAACAGC +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKHRVMM*TANSNS
Trigger: GCTGTTAGAATTTGCAGTTCACATCATTACTCTGTG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTTCAGAATTTAATTTCTaGATCGGTATGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICSEFNF*IGMRQE
Trigger: CTCCTGCCTCATACCGATTCAGAAATTAAATTCTGA...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTCCTCAAACCCTTTGTaGGGGTTAGTTTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSSSNPL*GLVSFI
Trigger: AATAAAGGAAACTAACCCTCACAAAGGGTTTGAGGA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACTTTTCTTCACCTGCTaGTTGTCCTTAATCATCATG +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKLFFTC*LSLIIM
Trigger: CATGATGATTAAGGACAAGCAGCAGGTGAAGAAAAG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGATATCCTCTGGACAGTaGTGGGGAGCTGACATCCGG +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEISSGQ*WGADIR
Trigger: CCGGATGTCAGCTCCCCAGCACTGTCCAGAGGATAT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCACTCTGTGTGGGGGTaGATCATCCTGCCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLHSVWG*IILPWN
Trigger: ATTCCAAGGCAGGATGATGCACCCCCACACAGAGTG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTACTGCTTTGAGGAACTaGAGAGTACAGGTATTTTCA +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSTALRN*RVQVFS
Trigger: TGAAAATACCTGTACTCTGCAGTTCCTCAAAGCAGT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTGTCGTATCGTTCCTTaGCCTTTTCAGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASCRIVP*PFQFPS
Trigger: GGAAGGAAACTGAAAAGGCCAAGGAACGATACGACA...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTATTTACTACTGGAGGTaGCTCTTTCCCATCATTTTC +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICIYYWR*LFPIIF
Trigger: GAAAATGATGGGAAAGAGCCACCTCCAGTAGTAAAT...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAATTCATAATTTACTACTaGAGGTGGCTCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKFIIYY*RWLFPI
Trigger: GATGGGAAAGAGCCACCTCCAGTAGTAAATTATGAA...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTCCTCTGGACAGTGCTaGGGAGCTGACATCCGGTAT +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESSSGQC*GADIRY
Trigger: ATACCGGATGTCAGCTCCCCAGCACTGTCCAGAGGA...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CCA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTTCCTCTGGACAGTGCTaGGGAGCTGACATCCGGTAT +
Preference number: 4 (lower is better)
Translates to: FKSICCVCISSSANVFNISSGQC*GADIRY
Trigger: ATACCGGATGTCAGCTCCCCAGCACTGTCCAGAGGA...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGATCTGTCTTGCACCTTaGTGGTGTGTGTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEICLAP*WCVCTR
Trigger: GCGCGTGCACACACACCACCAAGGTGCAAGACAGAT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTGACAGTGGGGTAAAGTaGGATTTCTATTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICDSGVK*DFYCLL
Trigger: AAGAAGACAATAGAAATCCCACTTTACCCCACTGTC...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTCTGGGCTTTCCCATATaGTTCTATGTCTATGACTTT +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSLGFPI*FYVYDF
Trigger: AAAGTCATAGACATAGAACCATATGGGAAAGCCCAG...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 72 bp GTGCTTTTCTATTTGCAATGGCCTGAAATGGTAGGATaGCTATGGTTAGCTAAGAAAGCCCTTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: VLFYLQWPEMVG*LWLAKKALGRT
Trigger: AGTCCTACCAAGGGCTTTCTTAGCTAACCATAGCAATCCTACCATTTCAGGCCATTGCAAATAGAAAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
3UTR CAA 72 bp ATCATCCTGCCTTGGAATAACTGGTTCCTCCCTCTTTaGCATTTGAATCTGCTGCCTCAGCACCTTATTAAA +
Preference number: 4 (lower is better)
Translates to: IILPWNNWFLPL*HLNLLPQHLIK
Trigger: TTTAATAAGGTGCTGAGGCAGCAGATTCAAATGCAAAAGAGGGAGGAACCAGTTATTCCAAGGCAGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TATCATAATACTGATTCTGATGGAGCTGTGCCCCTTTCAACGCCAATACATACTCAGCAGAACTACACCTaGTTTCTTAGTGATGACCTG +
Preference number: 4 (lower is better)
Translates to: YHNTDSDGAVPLSTPIHTQQNYT*FLSDDL
Trigger: CAGGTCATCACTAAGAAATCAGGTGTAGTTCTGCTG...AGTATGTATTGGCGTTGAAAGGGGCACAGCTCCATCAGAATCAGTATTATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAATAAAGTGGTGTGACTaGAAGAACCCTGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAIKWCD*KNPEKL
Trigger: CAGTTTTTCAGGGTTCTTTCAGTCACACCACTTTAT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTCCCTCTTTTGCATTTaGATCTGCTGCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLSLFCI*ICCLST
Trigger: GGTGCTGAGGCAGCAGATTCAAATGCAAAAGAGGGA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACTTCCATTTCTCTGTTaGATACTATGTTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIALPFLC*ILCFPT
Trigger: TGTGGGGAAACATAGTATTCAACAGAGAAATGGAAG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTTCCCTCAAATGTTATTaGAGACAAGGAACATTGCTA +
Preference number: 4 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICSLKCY*RQGTLL
Trigger: TAGCAATGTTCCTTGTCTTCAATAACATTTGAGGGA...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGGGGCCCCCAAGTACCTaGGGAGAAACTTTGATTGAA +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLGPPST*GETLIE
Trigger: TTCAATCAAAGTTTCTCCTCAGGTACTTGGGGGCCC...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGTAGAGGAGGCCACCTaGTCAGCTTACTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEVEEAT*SAYLVK
Trigger: CTTGACCAAGTAAGCTGATCAGGTGGCCTCCTCTAC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCCACCCACAGTCAAATaGATGGCATGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLPPTVK*MAWAPF
Trigger: AAATGGTGCCCATGCCATTCATTTGACTGTGGGTGG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAGTTTGTGTTTTACACTaGACTTTCCAGAAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAVCVLH*TFQKKH
Trigger: GTGCTTCTTCTGGAAAGTTCAGTGTAAAACACAAAC...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTATTCGGGAGTCTAGAATaGGTGGAGAACCCAAACGGG +
Preference number: 4 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLFGSLE*VENPNG
Trigger: CCCGTTTGGGTTCTCCACGCATTCTAGACTCCCGAA...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGGTACCAGTCCTGTTCTaGCAAAGGCTTCTCACTGAT +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKVPVLF*QRLLTD
Trigger: ATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTAC...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTTTGAAGGTTGGTAAGTaGCTCAATACCATAGCACTT +
Preference number: 4 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFLKVGK*LNTIAL
Trigger: AAGTGCTATGGTATTGAGGCACTTACCAACCTTCAA...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTATGTCTTTACCAGAAGTaGCTGAGGGCCCCACTCCTA +
Preference number: 4 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLCLYQK*LRAPLL
Trigger: TAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TATCATAATACTGATTCTGATGGAGCTGTGCCCCTTTCAACGCCAATACATACTGCCCAGTGCAGATTTTaGAGACCTAATTATTCCAGC +
Preference number: 4 (lower is better)
Translates to: YHNTDSDGAVPLSTPIHTAQCRF*RPNYSS
Trigger: GCTGGAATAATTAGGTCTCCAAAATCTGCACTGGGC...AGTATGTATTGGCGTTGAAAGGGGCACAGCTCCATCAGAATCAGTATTATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCCTGGGAATTGCACCATaGTACCAGTCCTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESLGIAP*YQSCSA
Trigger: GGCAGAACAGGACTGGTACCATGGTGCAATTCCCAG...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAATGGTAGGATTGCTATaGTTAGCTAAGAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAMVGLL*LAKKAL
Trigger: AAGGGCTTTCTTAGCTAACCATAGCAATCCTACCAT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTGTCTGTGGCATAGGATaGCAGCCTACAAACTGTGCC +
Preference number: 4 (lower is better)
Translates to: FKSICCVCISSSANVFNIVCGIG*QPTNCA
Trigger: GGCACAGTTTGTAGGCTGCCATCCTATGCCACAGAC...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAAAGGAAATTACATTTTaGAATGCCCCCTCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAKEITF*NAPSKV
Trigger: CACCTTAGAGGGGGCATTCCAAAATGTAATTTCCTT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTACTTCAAAAGATGCATaGCCATTAAACAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSTSKDA*PLNSVH
Trigger: GTGTACACTGTTTAATGGCCATGCATCTTTTGAAGT...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGTGCATCATCCTGCCTTaGAATAACTGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKCIILP*NNWFLP
Trigger: AGGGAGGAACCAGTTATTCCAAGGCAGGATGATGCA...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCAGTCAGGGCTGTTGCTaGAACTTTGACAACTTGATT +
Preference number: 4 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASSQGCC*NFDNLI
Trigger: AATCAAGTTGTCAAAGTTCCAGCAACAGCCCTGACT...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 72 bp ACATTTTATTCACATGAGACATCTTCAGCACTCTGCTaGCATACCTGTCAGCTAATGGTAAGAATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFYSHETSSALC*HTCQLMVRMSR
Trigger: CCTGGACATTCTTACCATTAGCTGACAGGTATGCAAGCAGAGTGCTGAAGATGTCTCATGTGAATAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 72 bp CTGCCTTGGAATAACTGGTTCCTCCCTCTTTTGCATTaGAATCTGCTGCCTCAGCACCTTATTAAATATACT +
Preference number: 4 (lower is better)
Translates to: LPWNNWFLPLLH*NLLPQHLIKYT
Trigger: AGTATATTTAATAAGGTGCTGAGGCAGCAGATTCAAATGCAAAAGAGGGAGGAACCAGTTATTCCAAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTCTCAGCTGCTGGACTaGCTGTTTCAGTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLSQLLD*LFQFFK
Trigger: CTTGAAGAACTGAAACAGTCAGTCCAGCAGCTGAGA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGCATATCAGAAAGTGCTaGAGAGCCCAGTGCAGATTT +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKHIRKC*RAQCRF
Trigger: AAATCTGCACTGGGCTCTTCAGCACTTTCTGATATG...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp TATCATAATACTGATTCTGATGGAGCTGTGCCCCTTTCAACGCCAATACATACTCCAAAGGCTTCTCACTaGTGGAGATCATATCAGAAA +
Preference number: 4 (lower is better)
Translates to: YHNTDSDGAVPLSTPIHTPKASH*WRSYQK
Trigger: TTTCTGATATGATCTCCATCAGTGAGAAGCCTTTGG...AGTATGTATTGGCGTTGAAAGGGGCACAGCTCCATCAGAATCAGTATTATGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCACCAGGTTTCCCATaGCTCTCTCGCACCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTESPGFP*LSRTKK
Trigger: CTTTTTGGTGCGAGAGAGTCATGGGAAACCTGGTGA...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGAAGTTGAGGAATGTTTaGAAACCCAGTGCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKKLRNV*KPSALE
Trigger: TTCGAGGGCACTGGGTTTTCAAACATTCCTCAACTT...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCATTTTACTCTTACTTTTaGAGGTTGGTAAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAFYSYF*RLVSAS
Trigger: TGAGGCACTTACCAACCTTCAAAAGTAAGAGTAAAA...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAAAATCTATAGACGTCTaGCTAAAGAAGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAKSIDV*LKKLFQ
Trigger: CTGAAACAGCTTCTTTAGTCAGACGTCTATAGATTT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTCAGTGCATCTCAGCTaGTGGACTGACTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLSVHLS*WTDCFS
Trigger: ACTGAAACAGTCAGTCCAGCAGCTGAGATGCACTGA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGGTACCAGTCCTGTTCTaGCAAAGGCTTCTCACTGAT +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLVPVLF*QRLLTD
Trigger: ATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTAC...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp TCTGTGACAAGACTGGTTATCTGGCTGTATTCATCAAATATACCTTTGAGTGCTTTCTATTCTGGGAATTaGACCATGGTACCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVTRLVIWLYSSNIPLSAFYSGN*TMVPVL
Trigger: CAGGACTGGTACCATGGTGCAATTCCCAGAATAGAA...AGCACTCAAAGGTATATTTGATGAATACAGCCAGATAACCAGTCTTGTCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR GCA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTTCTCAAAATTTTTGTTaGCATTACGAGGACTCTACG +
Preference number: 4 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFSQNFC*HYEDST
Trigger: CGTAGAGTCCTCGTAATGGCAACAAAAATTTTGAGA...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAATCAAACTTCAAAAGATaGATGGCCATTAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKSNFKR*MAIKQC
Trigger: ACACTGTTTAATGGCCATGCATCTTTTGAAGTTTGA...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTATGCCATTACTCAGCTTaGTACTGCTTAGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLCHYSA*YCLGRG
Trigger: CCCTCTCCCTAAGCAGTAGCAAGCTGAGTAATGGCA...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCATACTCACAGAAATCTTaGTGCGTTAGGAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: AVVGTCPANMALPMLFIAYSQKS*CVRKIS
Trigger: AGAGATTTTCCTAACGCAGCAAGATTTCTGTGAGTA...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGACATTTATCCTGTGTTaGTCAGAACGCCGACGTTTC +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKTFILC*SERRRF
Trigger: GAAACGTCGGCGTTCTGAGCAACACAGGATAAATGT...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAATGCTGTTATTTCTGTaGATTTGTGCTTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKMLLFL*ICALQF
Trigger: AAACTGCAAAGCACAAATCCACAGAAATAACAGCAT...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGTGAGTTCTGTGCGATaGTACAGGCAGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEVSSVR*YRQQTA
Trigger: AGCTGTTTGCTGCCTGTACCATCGCACAGAACTCAC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGAGTTGTTCTGTCTGCTaGATCATAAGTAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKSCSVC*IISSQD
Trigger: GTCTTGGCTACTTATGATTCAGCAGACAGAACAACT...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCTAATTTTCCATAGATGTAACTaGTCGTGCATCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: EIISESAEEPSADFGDLIFHRCN*SCIFFI
Trigger: TATGAAGAAGATGCACGATCAGTTACATCTATGGAA...AATTAGGTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp TGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTACTTGCAAACTTAAGTTGAGGAATGTTTaGAAACCCAGTGCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: CCVCISSSANVFNITCKLKLRNV*KPSALE
Trigger: TTCGAGGGCACTGGGTTTTCAAACATTCCTCAACTT...AAGTTTGCAAGTAATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCGCCGACGTTTCCCACTaGTATCTGTCCTATACTTTC +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESADVSH*YLSYTF
Trigger: GAAAGTATAGGACAGATATCAGTGGGAAACGTCGGC...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGGGTTATCCTCCACACTaGACAAGTGAGCCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLGYPPH*TSEPSN
Trigger: ATTAGAAGGCTCACTTGTGCAGTGTGGAGGATAACC...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTCAGTGCATCTCAGCTaGTGGACTGACTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESSVHLS*WTDCFS
Trigger: ACTGAAACAGTCAGTCCAGCAGCTGAGATGCACTGA...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGTACCAGTCCTGTTCTaGCAAAGGCTTCTCACTGAT +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEVPVLF*QRLLTD
Trigger: ATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTAC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGGCCCAGTGCAGATTTTaGAGACCTAATTATTCCAGC +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLAQCRF*RPNYSS
Trigger: GCTGGAATAATTAGGTCTCCAAAATCTGCACTGGGC...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCTTGAGCTTCTATTCTaGGAATTGCACCATGGTACC +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLLELLF*ELHHGT
Trigger: GGTACCATGGTGCAATTCCCAGAATAGAAGCTCAAG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
3UTR CAA 72 bp GACTTGTTTATAAAGCCAGATAAACCCGCCAAAGCCTaGTTTGTGTTTTACACTGAACTTTCCAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: DLFIKPDKPAKA*FVFYTELSRRS
Trigger: GCTTCTTCTGGAAAGTTCAGTGTAAAACACAAACAAGGCTTTGGCGGGTTTATCTGGCTTTATAAACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTCACTATTTCCTCTGTaGCAAGACTGGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESSLFPL*QDWLSG
Trigger: GCCAGATAACCAGTCTTGTCACAGAGGAAATAGTGA...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR TCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGGCAGCCGTTGTTCTGTaGACATCTATGAAATTATTG +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKAAVVL*TSMKLL
Trigger: CAATAATTTCATAGATGTTCACAGAACAACGGCTGC...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR TCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCAAGTTGAGGAATGTTTaGAAACCCAGTGCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESKLRNV*KPSALE
Trigger: TTCGAGGGCACTGGGTTTTCAAACATTCCTCAACTT...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCCAGCAGAACTACACCTaGTTTCTTAGTGATGACCTG +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESQQNYT*FLSDDL
Trigger: CAGGTCATCACTAAGAAATCAGGTGTAGTTCTGCTG...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTCCTTCTCAGAAAGGTaGGGAAATCACCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESSFSER*GNHLLK
Trigger: TTTCAGGAGGTGATTTCCTCACCTTTCTGAGAAGGA...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTACTCTCTGTACATCCTTaGAAAGCAACTGCCTCAACT +
Preference number: 4 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLLSVHP*KATAST
Trigger: AGTTGAGGCAGTTGCTTTTCAAGGATGTACAGAGAG...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCTGAGTTTGCGCTTTaGTTTACCATAGTACGTGCC +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTESEFAL*FTIVRA
Trigger: GGCACGTACTATGGTAAATCAAAGCGCAAACTCAGA...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGACGTTAGTCCAAAGGTaGAATAGGGCGGATCTAAGT +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTETLVQR*NRADLS
Trigger: ACTTAGATCCGCCCTATTTCACCTTTGGACTAACGT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGGTTATCCTCCACACTaGACAAGTGAGCCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEGYPPH*TSEPSN
Trigger: ATTAGAAGGCTCACTTGTGCAGTGTGGAGGATAACC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGAGAGTTCAAGTCCTCTaGATGTGTCTTCATTATCCT +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKRVQVL*MCLHYP
Trigger: AGGATAATGAAGACACATGCAGAGGACTTGAACTCT...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGAAAACTTTGCTTCAGTaGATCTCAGCTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEKTLLQ*ISAAGL
Trigger: CAGTCCAGCAGCTGAGATGCACTGAAGCAAAGTTTT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTTCTATTCTGGGAATTaGACCATGGTACCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESFYSGN*TMVPVL
Trigger: CAGGACTGGTACCATGGTGCAATTCCCAGAATAGAA...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTGTTTGAAAACCCAGTaGCCTCGAATCGATACATGT +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLCLKTQ*PRIDTC
Trigger: ACATGTATCGATTCGAGGGCACTGGGTTTTCAAACA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGACATCTTCAGCACTCTaGTTGCATACCTGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTETSSAL*LHTCQL
Trigger: TAGCTGACAGGTATGCAAGCAGAGTGCTGAAGATGT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCTTTCAGACATTTGCTaGCAAGAGGAGTGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLLSDIC*QEECEE
Trigger: TTCTTCACACTCCTCTTGGCAGCAAATGTCTGAAAG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGTACAGGTATTTTCATaGAATGTGCTCTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEVQVFS*NVLWGL
Trigger: CAGACCCCAGAGCACATTGCATGAAAATACCTGTAC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGACTCAAAATGCTGCTTaGAGGTGGAATGTCTTTACC +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLTQNAA*RWNVFT
Trigger: GGTAAAGACATTCCACCTGCAAGCAGCATTTTGAGT...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTGTCGTATCGTTCCTTaGCCTTTTCAGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTECRIVP*PFQFPS
Trigger: GGAAGGAAACTGAAAAGGCCAAGGAACGATACGACA...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGTTCATAATTTACTACTaGAGGTGGCTCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKFIIYY*RWLFPI
Trigger: GATGGGAAAGAGCCACCTCCAGTAGTAAATTATGAA...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CCA 90 bp TCTGTGACAAGACTGGTTATCTGGCTGTATTCATCAAATATACCTTTGAGTGCTTTCATAATTTACTACTaGAGGTGGCTCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: SVTRLVIWLYSSNIPLSAFIIYY*RWLFPI
Trigger: GATGGGAAAGAGCCACCTCCAGTAGTAAATTATGAA...AGCACTCAAAGGTATATTTGATGAATACAGCCAGATAACCAGTCTTGTCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAGCCCAGTGCAGATTTTaGAGACCTAATTATTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLAQCRF*RPNYSS
Trigger: GCTGGAATAATTAGGTCTCCAAAATCTGCACTGGGC...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTCTTGAGCTTCTATTCTaGGAATTGCACCATGGTACC +
Preference number: 4 (lower is better)
Translates to: FKSICCVCISSSANVFNILELLF*ELHHGT
Trigger: GGTACCATGGTGCAATTCCCAGAATAGAAGCTCAAG...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGCATGTCCTGCAAACATaGCATTACCAATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKHVLQT*HYQCCL
Trigger: TAAACAGCATTGGTAATGCCATGTTTGCAGGACATG...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGAAAGCCAGCTGTGGTTaGAACATGTCCTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEKASCG*NMSCKH
Trigger: ATGTTTGCAGGACATGTTCCAACCACAGCTGGCTTT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAGAAAGACTGCCAGGCTaGTTCTTTTACCTAGGATCT +
Preference number: 4 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLERLPG*FFYLGS
Trigger: AGATCCTAGGTAAAAGAACCAGCCTGGCAGTCTTTC...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp TCTGTGACAAGACTGGTTATCTGGCTGTATTCATCAAATATACCTTTGAGTGCTTGTTCAACCGACATTTaGATCTCTTTATGGACATTC +
Preference number: 4 (lower is better)
Translates to: SVTRLVIWLYSSNIPLSACSTDI*ISLWTF
Trigger: GAATGTCCATAAAGAGATTCAAATGTCGGTTGAACA...AGCACTCAAAGGTATATTTGATGAATACAGCCAGATAACCAGTCTTGTCACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGCCAAAGGCTTCTCACTaGTGGAGATCATATCAGAAA +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEPKASH*WRSYQK
Trigger: TTTCTGATATGATCTCCATCAGTGAGAAGCCTTTGG...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGAGGAAATCACCTCCTaGAACCAGTTCCATAATGAT +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEEEITS*NQFHND
Trigger: ATCATTATGGAACTGGTTTCAGGAGGTGATTTCCTC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGCTATTTGCAATGGCCTaGAATGGTAGGATTGCTATG +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTELFAMA*NGRIAM
Trigger: CATAGCAATCCTACCATTTCAGGCCATTGCAAATAG...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCAGCATCTGCTGTGTTTaGATAAGTTCTTCCGCTAAC +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESSICCV*ISSSAN
Trigger: GTTAGCGGAAGAACTTATGCAAACACAGCAGATGCT...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR GCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTCTGTCTCTCTGCTaGTTATTTTGCACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESCLSLC*LFCTVL
Trigger: CAGAACAGTGCAAAATAAGCAGCAGAGAGACAGACA...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGTATTTTCATGCAATGTaGTCTGGGGTCTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKYFHAM*SGVCIS
Trigger: AGAAATACAGACCCCAGAGCACATTGCATGAAAATA...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGACAATAAAGAGGTTCTaGAGACACATGAGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLTIKRF*RHMSGN
Trigger: GTTACCACTCATGTGTCTGCAGAACCTCTTTATTGT...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGTATGAAGTTTCATTGTaGCTTTGTCGTATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKYEVSL*LCRIVP
Trigger: AGGAACGATACGACAAAGCCACAATGAAACTTCATA...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCTCTGCACCTCATGTaGCAGATGTTCAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTESLHLM*QMFKKN
Trigger: GTTTTTCTTGAACATCTGCCACATGAGGTGCAGAGA...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGGAAGGTATGATCTTCTaGGATCAGATGAATTGCTTA +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKEGMIF*DQMNCL
Trigger: TAAGCAATTCATCTGATCCCAGAAGATCATACCTTC...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 72 bp TTCAAAAGAAGGTATGATCTTCTGGGATCAGATGAATaGCTTAAGTGGTTACAGTTTTTGCAAGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: FKRRYDLLGSDE*LKWLQFLQGCS
Trigger: AGAACACCCTTGCAAAAACTGTAACCACTTAAGCAATTCATCTGATCCCAGAAGATCATACCTTCTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTGTTCAACCGACATTTaGATCTCTTTATGGACATTC +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLCSTDI*ISLWTF
Trigger: GAATGTCCATAAAGAGATTCAAATGTCGGTTGAACA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR TCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCGCAGCCGTTGTTCTGTaGACATCTATGAAATTATTG +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESAAVVL*TSMKLL
Trigger: CAATAATTTCATAGATGTTCACAGAACAACGGCTGC...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR TCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTTCCATAGATGTAACTaGTCGTGCATCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLFHRCN*SCIFFI
Trigger: TATGAAGAAGATGCACGATCAGTTACATCTATGGAA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR GCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGACCATCTTCTATATATaGATTTATCCTGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKTIFYI*IYPERQ
Trigger: TTGCCTCTCAGGATAAATGCATATATAGAAGATGGT...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGGAGATGACTGCTTTTaGTTTAGTTCTGCTGATCTT +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEGDDCF*FSSADL
Trigger: AAGATCAGCAGAACTAAAGCAAAAGCAGTCATCTCC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR GCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTACTTTACTCAAAATGCTaGTTGCAGGTGGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLLYSKC*LQVECL
Trigger: AAGACATTCCACCTGCAAGCAGCATTTTGAGTAAAG...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCATTTACTACTGGAGGTaGCTCTTTCCCATCATTTTC +
Preference number: 4 (lower is better)
Translates to: INSLLMRTIMLLCWRTESIYYWR*LFPIIF
Trigger: GAAAATGATGGGAAAGAGCCACCTCCAGTAGTAAAT...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CCA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTATTTACTACTGGAGGTaGCTCTTTCCCATCATTTTC +
Preference number: 4 (lower is better)
Translates to: FKSICCVCISSSANVFNIIYYWR*LFPIIF
Trigger: GAAAATGATGGGAAAGAGCCACCTCCAGTAGTAAAT...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CCA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCTTTTCTATTTGCAATaGCCTGAAATGGTAGGATTG +
Preference number: 4 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLLFYLQ*PEMVGL
Trigger: CAATCCTACCATTTCAGGCCATTGCAAATAGAAAAG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGATTTATTGTTGGCTATaGGTCATTTTACATTGGTGC +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKIYCWL*VILHWC
Trigger: GCACCAATGTAAAATGACCCATAGCCAACAATAAAT...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGCAAGTTATTTTCTGTTaGACTGGTCTTCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKQVIFC*TGLLIV
Trigger: AACAATCAGAAGACCAGTCCAACAGAAAATAACTTG...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR TCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTTCCATAGATGTAACTaGTCGTGCATCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEFHRCN*SCIFFI
Trigger: TATGAAGAAGATGCACGATCAGTTACATCTATGGAA...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTTAAAGGGGAATTTTTaGGACTCTAAGAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTELKGNF*DSKSVA
Trigger: TGCTACACTCTTAGAGTCCCAAAAATTCCCCTTTAA...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGAATAGGTGTGGTGTTTaGCTTTTCAGGAAGAATACT +
Preference number: 4 (lower is better)
Translates to: GINSLLMRTIMLLCWRTENRCGV*LFRKNT
Trigger: AGTATTCTTCCTGAAAAGCCAAACACCACACCTATT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CCA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAGATGAATTGCTTAAGTaGTTACAGTTTTTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLDELLK*LQFLQG
Trigger: CCCTTGCAAAAACTGTAACCACTTAAGCAATTCATC...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
3UTR CAA 72 bp GTGACTGGACTAATTACATCCGGACCAGAAGAAATTTaGGTTACAACTCTTTTCTTACTAAACAAATCACAG +
Preference number: 4 (lower is better)
Translates to: VTGLITSGPEEI*VTTLFLLNKSQ
Trigger: CTGTGATTTGTTTAGTAAGAAAAGAGTTGTAACCAAAATTTCTTCTGGTCCGGATGTAATTAGTCCAGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS TCA 90 bp TCGCCTGGCCGCGGCCGGGAAGTGGCCGGACCGGCGATGATAAGCTaGGGCCGCCTGGAAGGGACTACTCGGCGGGTCGGCAGCCGGAAA +
Preference number: 5 (lower is better)
Translates to: SPGRGREVAGPAMIS*GRLEGTTRRVGSRK
Trigger: TTTCCGGCTGCCGACCCGCCGAGTAGTCCCTTCCAGGCGGCCTCAGCTTATCATCGCCGGTCCGGCCACTTCCCGGCCGCGGCCAGGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS GCA 90 bp CTCCCCGCCTCGGTAACCTGCTCCTCCCTAGCGGGTGTCCTGGGCTaGCGTGGTGAGATGGGGCCGGAGACGGACGAAGGCCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: LPASVTCSSLAGVLG*RGEMGPETDEGLTG
Trigger: TCCTGTGAGGCCTTCGTCCGTCTCCGGCCCCATCTCACCACGGCAGCCCAGGACACCCGCTAGGGAGGAGCAGGTTACCGAGGCGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS GCA 90 bp TCCCGAGGTCTGCGCGTTTGTGCCGCTCTCCCCGCCTCGGTAACCTaGTCCTCCCTAGCGGGTGTCCTGGGCTGCCGTGGTGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: SRGLRVCAALPASVT*SSLAGVLGCRGEMG
Trigger: CCCCATCTCACCACGGCAGCCCAGGACACCCGCTAGGGAGGAGCAGGTTACCGAGGCGGGGAGAGCGGCACAAACGCGCAGACCTCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS CCA 90 bp CCGGAGACGGACGAAGGCCTCACAGGAAACTTTGGGAGGCTCGCCTaGCCGCGGCCGGGAAGTGGCCGGACCGGCGATGATAAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PETDEGLTGNFGRLA*PRPGSGRTGDDKLR
Trigger: CCTCAGCTTATCATCGCCGGTCCGGCCACTTCCCGGCCGCGGCCAGGCGAGCCTCCCAAAGTTTCCTGTGAGGCCTTCGTCCGTCTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS GCA 90 bp TCAGCACATATCAGCCCGGGTGGAGTCCCGAGGTCTGCGCGTTTGTaGCGCTCTCCCCGCCTCGGTAACCTGCTCCTCCCTAGCGGGTGT +
Preference number: 5 (lower is better)
Translates to: SAHISPGGVPRSARL*RSPRLGNLLLPSGC
Trigger: ACACCCGCTAGGGAGGAGCAGGTTACCGAGGCGGGGAGAGCGGCACAAACGCGCAGACCTCGGGACTCCACCCGGGCTGATATGTGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS TCA 90 bp CTCGGTAACCTGCTCCTCCCTAGCGGGTGTCCTGGGCTGCCGTGGTaGGATGGGGCCGGAGACGGACGAAGGCCTCACAGGAAACTTTGG +
Preference number: 5 (lower is better)
Translates to: LGNLLLPSGCPGLPW*DGAGDGRRPHRKLW
Trigger: CCAAAGTTTCCTGTGAGGCCTTCGTCCGTCTCCGGCCCCATCTCACCACGGCAGCCCAGGACACCCGCTAGGGAGGAGCAGGTTACCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS-3UTR CAA 90 bp GGGAATTGCACCATGGTACCAGTCCTGTTCTGCCAAAGGCTTCTCACTGATGGACCCGACCTACGTGCATaGTTTTCTGATGCCCAGACA +
Preference number: 5 (lower is better)
Translates to: GNCTMVPVLFCQRLLTDGPDLRA*FSDAQT
Trigger: TGTCTGGGCATCAGAAAACAATGCACGTAGGTCGGG...TCCATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTACCATGGTGCAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGTTGTCGTATCGTTCCTaGGCCTTTTCAGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLLSYRS*AFSVSF
Trigger: GAAGGAAACTGAAAAGGCCAAGGAACGATACGACAA...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGTATTTGGTTTACTCTTaGCTAAGGCCCACACACTGG +
Preference number: 5 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLYLVYS*LRPTHW
Trigger: CCAGTGTGTGGGCCTTAGCAAAGAGTAAACCAAATA...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTAGGGCTGAACCACCGTaGTGTCTGAGGCCTCACAGA +
Preference number: 5 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICRAEPP*CLRPHR
Trigger: TCTGTGAGGCCTCAGACACAACGGTGGTTCAGCCCT...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS TCA 90 bp GGGAGTCTAGAATGCGTGGAGAACCCAAACGGGTCTGCTCTTCAGTaGTGGCCGTTTCTGAAGCGTCCTTCACCAAAAGAATTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: GSLECVENPNGSALQ*WPFLKRPSPKEFGE
Trigger: TTCACCAAATTCTTTTGGTGAAGGACGCTTCAGAAACGGCCATCACTGAAGAGCAGACCCGTTTGGGTTCTCCACGCATTCTAGACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000509035.5
CDS GCA 90 bp ATATCTCTTCGGGAGTCTAGAATGCGTGGAGAACCCAAACGGGTCTaGTCTTCAGTGATGGCCGTTTCTGAAGCGTCCTTCACCAAAAGA +
Preference number: 5 (lower is better)
Translates to: ISLRESRMRGEPKRV*SSVMAVSEASFTKR
Trigger: TCTTTTGGTGAAGGACGCTTCAGAAACGGCCATCACTGAAGAGCAGACCCGTTTGGGTTCTCCACGCATTCTAGACTCCCGAAGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509035.5
CDS-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGCCTGTGCTTTTCTATTaGCAATGGCCTGAAATGGTA +
Preference number: 5 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLPVLFY*QWPEMV
Trigger: TACCATTTCAGGCCATTGCAAATAGAAAAGCACAGG...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACATCTGTCTTGCACCTaGGTGGTGTGTGTGCACGCG +
Preference number: 5 (lower is better)
Translates to: AVVGTCPANMALPMLFIAHLSCT*VVCVHA
Trigger: CGCGTGCACACACACCACCAAGGTGCAAGACAGATG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGTATTTTGTAGAACACTaGCATCTTGCTGGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLYFVEH*HLAGLS
Trigger: ACTGAGGCCAGCAAGATGCAAGTGTTCTACAAAATA...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TGTCTTTACCAGAAGTGCCTGAGGGCCCCACTCCTACTCCATCATCTCAAACTCAGTCTTTTAGGGCACTaGCCAGAAGAAGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: CLYQKCLRAPLLLHHLKLSLLGH*PEEARQ
Trigger: TTGTCTGGCTTCTTCTGGCAAGTGCCCTAAAAGACT...GAGTTTGAGATGATGGAGTAGGAGTGGGGCCCTCAGGCACTTCTGGTAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGCCTGAAATGGTAGGATaGCTATGGTTAGCTAAGAAA +
Preference number: 5 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLPEMVG*LWLAKK
Trigger: TTTCTTAGCTAACCATAGCAATCCTACCATTTCAGG...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAATTGCACTGTTCTGTTTaGTGGGAGGGTGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKLHCSV*WEGVAS
Trigger: GGAAGCCACACCCTCCCACAAAACAGAACAGTGCAA...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTGTGCCATTACTCAGCTaGCTACTGCTTAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSVPLLS*LLLRER
Trigger: CCTCTCCCTAAGCAGTAGCAAGCTGAGTAATGGCAC...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGGCTGACATAATTCATTaGGACAGTACTTTCCTTATC +
Preference number: 5 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLADIIH*DSTFLI
Trigger: GATAAGGAAAGTACTGTCCAAATGAATTATGTCAGC...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GGGAATTGCACCATGGTACCAGTCCTGTTCTGCCAAAGGCTTCTCACTGATGGATCACCAAAATTTCCCTaGCCCAGTAATTCTCCCAAT +
Preference number: 5 (lower is better)
Translates to: GNCTMVPVLFCQRLLTDGSPKFP*PSNSPN
Trigger: ATTGGGAGAATTACTGGGCAAGGGAAATTTTGGTGA...TCCATCAGTGAGAAGCCTTTGGCAGAACAGGACTGGTACCATGGTGCAATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTGAAAGCCAGCTGTGGTaGGAACATGTCCTGCAAACA +
Preference number: 5 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSESQLW*EHVLQT
Trigger: TGTTTGCAGGACATGTTCCAACCACAGCTGGCTTTC...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp ATGAGACCTTTCACTGGAGACCTCTCACTGGAGACCTCATGGCAGGACAGGCTGAAGAGAAAGAATATGTaGGCTTTGGCCTTAGATTAC +
Preference number: 5 (lower is better)
Translates to: MRPFTGDLSLETSWQDRLKRKNM*ALALDY
Trigger: GTAATCTAAGGCCAAAGCCAACATATTCTTTCTCTT...CAGCCTGTCCTGCCATGAGGTCTCCAGTGAGAGGTCTCCAGTGAAAGGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAACTCCCTCTTTTGCATTaGAATCTGCTGCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKLPLLH*NLLPQH
Trigger: GTGCTGAGGCAGCAGATTCAAATGCAAAAGAGGGAG...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTAGGAAGAATACTGCTTaGAGGAACTGCAGAGTACAG +
Preference number: 5 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVRKNTA*RNCRVQ
Trigger: CTGTACTCTGCAGTTCCTCAAAGCAGTATTCTTCCT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTCCTTTCCCTCGGCATTaGCTTCCAACTGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFPFPRH*LPTVWH
Trigger: ATGCCAGACAGTTGGAAGCAAATGCCGAGGGAAAGG...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp CTGATGGAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCTTCTATTCTGGGAATaGCACCATGGTACCAGTCCT +
Preference number: 5 (lower is better)
Translates to: LMEIISESAEEPSADFGDLLFWE*HHGTSP
Trigger: AGGACTGGTACCATGGTGCAATTCCCAGAATAGAAG...GTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAATCTTCAGCACTCTGCTaGCATACCTGTCAGCTAATG +
Preference number: 5 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKSSALC*HTCQLM
Trigger: CATTAGCTGACAGGTATGCAAGCAGAGTGCTGAAGA...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTTCCTGCTCAGTTTTTaGCTGCTCCAGTGTATGAAT +
Preference number: 5 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVFLLSF*LLQCMN
Trigger: ATTCATACACTGGAGCAGCAAAAAACTGAGCAGGAA...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS TCA 90 bp TTCTTTCCTGATCTCTGTGGACTTCTGATGTGGAAGGCTCAGAGCTaGACATTAAAGCACATGTTTTACAGGATTGGGAGCCGAAACCAG +
Preference number: 5 (lower is better)
Translates to: FFPDLCGLLMWKAQS*TLKHMFYRIGSRNQ
Trigger: CTGGTTTCGGCTCCCAATCCTGTAAAACATGTGCTTTAATGTTCAGCTCTGAGCCTTCCACATCAGAAGTCCACAGAGATCAGGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505323.1
ENST00000618353.1
CDS-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTCTGAGAATCCATTTCTaGTCCTTAGGAATAGGATTC +
Preference number: 5 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVLRIHF*SLGIGF
Trigger: GAATCCTATTCCTAAGGACAAGAAATGGATTCTCAG...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTCACTTCATCATGATTTaGGAAATATCCTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVHFIMI*EISSGQ
Trigger: CTGTCCAGAGGATATTTCCAAAATCATGATGAAGTG...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTAAATATAATCCTGCTTaGGCAGAGGTGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICKYNPA*AEVKAS
Trigger: GCTGGCTTTCACCTCTGCCAAAGCAGGATTATATTT...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTGAGGTTTTTACAAATTaGCTGACAAGTGGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVEVFTN*LTSGKL
Trigger: TAGCTTCCCACTTGTCAGCAAATTTGTAAAAACCTC...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTGGCATGGGCACCATTaGTACATTTTGTCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSWHGHH*YILSWL
Trigger: AAGCCAAGACAAAATGTACAAATGGTGCCCATGCCA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAATCTGTTTTGGTAACCTaGATCATCTCTGCCTCTATC +
Preference number: 5 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKSVLVT*IISASI
Trigger: GATAGAGGCAGAGATGATCAAGGTTACCAAAACAGA...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTTCTCCAATTCTGTTTaGGTAACCTTGATCATCTCT +
Preference number: 5 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVFSNSV*VTLIIS
Trigger: AGAGATGATCAAGGTTACCAAAACAGAATTGGAGAA...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCTAATTAGTTTCATTGTGGCTTaGTCGTATCGTTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: EIISESAEEPSADFGDLISFIVA*SYRSLA
Trigger: GGCCAAGGAACGATACGACAAAGCCACAATGAAACT...AATTAGGTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTTCACCAAAATTTCCCTaGCCCAGTAATTCTCCCAAT +
Preference number: 5 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSSPKFP*PSNSPN
Trigger: ATTGGGAGAATTACTGGGCAAGGGAAATTTTGGTGA...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTTATGTGAGTTTTCTCTaGATGATAGTGAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVYVSFL*MIVSSF
Trigger: GAAAGAGCTCACTATCATCAAGAGAAAACTCACATA...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCCCTCGGCATTTGCTTCCAACTGTCTGGCATTTAAGAGCAGGCAGGCAAGTTAAGGAACATTGCTACTaGTATTCTTCCATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: FPRHLLPTVWHLRAGRQVKEHCY*YSSISL
Trigger: CAGAGAAATGGAAGAATACAAGTAGCAATGTTCCTT...AACTTGCCTGCCTGCTCTTAAATGCCAGACAGTTGGAAGCAAATGCCGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACCAACGGAGTAGGGTCTCTTAAGGCTTCATATTaGCTGCCCTCTTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SCKHGITNAVYSTNGVGSLKASY*LPSFLK
Trigger: CTTCAGAAAAGAGGGCAGCAAATATGAAGCCTTAAG...AGACCCTACTCCGTTGGTGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTTACATTTATCCTGTGTaGCTCAGAACGCCGACGTTT +
Preference number: 5 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFYIYPV*LRTPTF
Trigger: AAACGTCGGCGTTCTGAGCAACACAGGATAAATGTA...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAGGACAAAGAAGATACTaGAGAAAACGTGCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: AVVGTCPANMALPMLFIAGQRRY*RKRAVK
Trigger: CTTCACTGCACGTTTTCTCAAGTATCTTCTTTGTCC...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAATGATGATTCTTACATaGGGCTTATACCTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKMMILT*GLYLAR
Trigger: TCTTGCCAGGTATAAGCCCAATGTAAGAATCATCAT...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCCCGACCTACGTGCATaGTTTTCTGATGCCCAGACA +
Preference number: 5 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLPDLRA*FSDAQT
Trigger: TGTCTGGGCATCAGAAAACAATGCACGTAGGTCGGG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp CAGGATACCTCCCAGGATACCTCTACTCACAGAAATCTTGCTGCGTTAGGAAAAAAGAGTTTCATGTCTTaGGACACTTTGGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: QDTSQDTSTHRNLAALGKKSFMS*DTLVMD
Trigger: ATCCATGACCAAAGTGTCCAAAGACATGAAACTCTT...TTTTCCTAACGCAGCAAGATTTCTGTGAGTAGAGGTATCCTGGGAGGTATCCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCAAAACCCGCCAAAGCCTaGTTTGTGTTTTACACTGAA +
Preference number: 5 (lower is better)
Translates to: AVVGTCPANMALPMLFIAKPAKA*FVFYTE
Trigger: TTCAGTGTAAAACACAAACAAGGCTTTGGCGGGTTT...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGGCCTCAACTCTAACTTaGACGACGTTTCATGCGTTG +
Preference number: 5 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKASTLT*TTFHAL
Trigger: CAACGCATGAAACGTCGTCAAAGTTAGAGTTGAGGC...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTGTTATTTCTGTGGATTaGTGCTTTGCAGTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFVISVD*CFAVSL
Trigger: GAGAGAAACTGCAAAGCACAAATCCACAGAAATAAC...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGTCATTCACATCTGTCTaGCACCTTGGTGGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKSFTSV*HLGGVC
Trigger: ACACACACCACCAAGGTGCAAGACAGATGTGAATGA...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ACTGGAGACCTCATGGCAGGACAGGCTGAAATAAAGCTTCAGTTTCTGAAGTTTTTTCCCTACATCAACTaGCACATTCTGAACAGTATG +
Preference number: 5 (lower is better)
Translates to: TGDLMAGQAEIKLQFLKFFPYIN*HILNSM
Trigger: CATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAA...AAACTTCAGAAACTGAAGCTTTATTTCAGCCTGTCCTGCCATGAGGTCTCCAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACTGGGATCAGATGAATaGCTTAAGTGGTTACAGTTT +
Preference number: 5 (lower is better)
Translates to: AVVGTCPANMALPMLFIALGSDE*LKWLQF
Trigger: AAACTGTAACCACTTAAGCAATTCATCTGATCCCAG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TCCTACATTTATCCTGTGTTGCTCAGAACGCCGACGTTTCCCACTGATATCTGTACAAGTTATTTTCTGTaGGACTGGTCTTCTGATTGT +
Preference number: 5 (lower is better)
Translates to: SYIYPVLLRTPTFPTDICTSYFL*DWSSDC
Trigger: ACAATCAGAAGACCAGTCCAACAGAAAATAACTTGT...ACAGATATCAGTGGGAAACGTCGGCGTTCTGAGCAACACAGGATAAATGTAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS CCA 90 bp TCAACGCCAATACATACTGATTGTGCAACATATGAAGTTTCATTGTaGCTTTGTCGTATCGTTCCTTGGCCTTTTCAGTTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: STPIHTDCATYEVSL*LCRIVPWPFQFPSL
Trigger: AAGGGAAGGAAACTGAAAAGGCCAAGGAACGATACGACAAAGCCACAATGAAACTTCATATGTTGCACAATCAGTATGTATTGGCGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp TCTGTGACAAGACTGGTTATCTGGCTGTATTCATCAAATATACCTTTGAGTGCTTTGTCGTATCGTTCCTaGGCCTTTTCAGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SVTRLVIWLYSSNIPLSALSYRS*AFSVSF
Trigger: GAAGGAAACTGAAAAGGCCAAGGAACGATACGACAA...AGCACTCAAAGGTATATTTGATGAATACAGCCAGATAACCAGTCTTGTCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGTCTGTGCTGAAAACTTaGCTTCAGTGCATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKSVLKT*LQCISA
Trigger: AGCTGAGATGCACTGAAGCAAAGTTTTCAGCACAGA...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp GCTGTGGTTGGAACATGTCCTGCAAACATGGCATTACCAATGCTGTTTATAGCACGAATAGATTCAAATTaGGATAGCCTCTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: AVVGTCPANMALPMLFIARIDSN*DSLSFL
Trigger: AAGAAAGGAGAGGCTATCCAAATTTGAATCTATTCG...TGCTATAAACAGCATTGGTAATGCCATGTTTGCAGGACATGTTCCAACCACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTGAAAGCCAGCTGTGGTaGGAACATGTCCTGCAAACA +
Preference number: 5 (lower is better)
Translates to: FKSICCVCISSSANVFNIESQLW*EHVLQT
Trigger: TGTTTGCAGGACATGTTCCAACCACAGCTGGCTTTC...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTGGTTCCTCCCTCTTTaGCATTTGAATCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLWFLPL*HLNLLP
Trigger: AGGCAGCAGATTCAAATGCAAAAGAGGGAGGAACCA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTCTTCCATTTCTCTGTaGAATACTATGTTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASSSISL*NTMFPH
Trigger: GTGGGGAAACATAGTATTCAACAGAGAAATGGAAGA...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GAGATCATATCAGAAAGTGCTGAAGAGCCCAGTGCAGATTTTGGAGACCTAATTGCTGACATAATTCATTaGGACAGTACTTTCCTTATC +
Preference number: 5 (lower is better)
Translates to: EIISESAEEPSADFGDLIADIIH*DSTFLI
Trigger: GATAAGGAAAGTACTGTCCAAATGAATTATGTCAGC...AATTAGGTCTCCAAAATCTGCACTGGGCTCTTCAGCACTTTCTGATATGATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTAAGTTTCATTGTGGCTTaGTCGTATCGTTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLSFIVA*SYRSLA
Trigger: GGCCAAGGAACGATACGACAAAGCCACAATGAAACT...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTCTGTGCTGAAAACTTaGCTTCAGTGCATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLSVLKT*LQCISA
Trigger: AGCTGAGATGCACTGAAGCAAAGTTTTCAGCACAGA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTACTTCTATTCTGGGAATaGCACCATGGTACCAGTCCT +
Preference number: 5 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLLLFWE*HHGTSP
Trigger: AGGACTGGTACCATGGTGCAATTCCCAGAATAGAAG...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGCTTCTATTCTGGGAATaGCACCATGGTACCAGTCCT +
Preference number: 5 (lower is better)
Translates to: GINSLLMRTIMLLCWRTELLFWE*HHGTSP
Trigger: AGGACTGGTACCATGGTGCAATTCCCAGAATAGAAG...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGCTCTCTGTACATCCTaGAAAAGCAACTGCCTCAAC +
Preference number: 5 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEALCTS*KSNCLN
Trigger: GTTGAGGCAGTTGCTTTTCAAGGATGTACAGAGAGC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ATCTTCCTTTCCCTACATCAACTTGCACATTCTGAACAGTATGTTCGTGCTTCCTTTCTCTCAAAATTTTaGTTGCCATTACGAGGACTC +
Preference number: 5 (lower is better)
Translates to: IFLSLHQLAHSEQYVRASFLSKF*LPLRGL
Trigger: GAGTCCTCGTAATGGCAACAAAAATTTTGAGAGAAA...GGAAGCACGAACATACTGTTCAGAATGTGCAAGTTGATGTAGGGAAAGGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTTCTTCACCTGCTGCTaGTCCTTAATCATCATGGTG +
Preference number: 5 (lower is better)
Translates to: INSLLMRTIMLLCWRTESFFTCC*SLIIMV
Trigger: CACCATGATGATTAAGGACAAGCAGCAGGTGAAGAA...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCTGTGCTGAAAACTTaGCTTCAGTGCATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GINSLLMRTIMLLCWRTESVLKT*LQCISA
Trigger: AGCTGAGATGCACTGAAGCAAAGTTTTCAGCACAGA...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGTCACCAAAATTTCCCTaGCCCAGTAATTCTCCCAAT +
Preference number: 5 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLSPKFP*PSNSPN
Trigger: ATTGGGAGAATTACTGGGCAAGGGAAATTTTGGTGA...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGCACTTCATCATGATTTaGGAAATATCCTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKHFIMI*EISSGQ
Trigger: CTGTCCAGAGGATATTTCCAAAATCATGATGAAGTG...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp TATCATAATACTGATTCTGATGGAGCTGTGCCCCTTTCAACGCCAATACATACTTATGTGAGTTTTCTCTaGATGATAGTGAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: YHNTDSDGAVPLSTPIHTYVSFL*MIVSSF
Trigger: GAAAGAGCTCACTATCATCAAGAGAAAACTCACATA...AGTATGTATTGGCGTTGAAAGGGGCACAGCTCCATCAGAATCAGTATTATGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp TGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTACTTGCAAACTTCCTGTGCTTTTCTATTaGCAATGGCCTGAAATGGTA +
Preference number: 5 (lower is better)
Translates to: CCVCISSSANVFNITCKLPVLFY*QWPEMV
Trigger: TACCATTTCAGGCCATTGCAAATAGAAAAGCACAGG...AAGTTTGCAAGTAATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp TTTAAAAGCATCTGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTAAATATAATCCTGCTTaGGCAGAGGTGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: FKSICCVCISSSANVFNIKYNPA*AEVKAS
Trigger: GCTGGCTTTCACCTCTGCCAAAGCAGGATTATATTT...AATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCAGATGCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGATCAAACTCTATTTCTaGTTCTTTAGCAGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKIKLYF*FFSSRC
Trigger: ACAACGGCTGCTAAAGAACAAGAAATAGAGTTTGAT...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCTGAGAATCCATTTCTaGTCCTTAGGAATAGGATTC +
Preference number: 5 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLLRIHF*SLGIGF
Trigger: GAATCCTATTCCTAAGGACAAGAAATGGATTCTCAG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp TGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTACTTGCAAACTTCTGAGAATCCATTTCTaGTCCTTAGGAATAGGATTC +
Preference number: 5 (lower is better)
Translates to: CCVCISSSANVFNITCKLLRIHF*SLGIGF
Trigger: GAATCCTATTCCTAAGGACAAGAAATGGATTCTCAG...AAGTTTGCAAGTAATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCACTTCATCATGATTTaGGAAATATCCTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLHFIMI*EISSGQ
Trigger: CTGTCCAGAGGATATTTCCAAAATCATGATGAAGTG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCCACAAGGAGAGGTATTaGGTTTACTCTTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: INSLLMRTIMLLCWRTESHKERY*VYSLLR
Trigger: CCTTAGCAAAGAGTAAACCAAATACCTCTCCTTGTG...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGGATGTCTCTTTCTTTTaGTGTCTTACCTTAGGCACC +
Preference number: 5 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEDVSFF*CLTLGT
Trigger: GGTGCCTAAGGTAAGACACAAAAAGAAAGAGACATC...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGAAGCACCATTTGTACATTTaGTCTTGGCTTTCAATTTGC +
Preference number: 5 (lower is better)
Translates to: FIVNENNNVTLLEDRVLKHHLYI*SWLSIC
Trigger: GCAAATTGAAAGCCAAGACAAAATGTACAAATGGTG...CTTCAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCATTATCCTACTAAGTaGTTCTGTCTGCTGAATCAT +
Preference number: 5 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLHYPTK*FCLLNH
Trigger: ATGATTCAGCAGACAGAACAACTTAGTAGGATAATG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp TGCTGTGTTTGCATAAGTTCTTCCGCTAACGTTTTCAACATTACTTGCAAACTTACATATGAAGTTTCATaGTGGCTTTGTCGTATCGTT +
Preference number: 5 (lower is better)
Translates to: CCVCISSSANVFNITCKLTYEVS*WLCRIV
Trigger: AACGATACGACAAAGCCACAATGAAACTTCATATGT...AAGTTTGCAAGTAATGTTGAAAACGTTAGCGGAAGAACTTATGCAAACACAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504143.6
CDS-3UTR CAA 90 bp AAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCTGCGAATAGATTCAAATTaGGATAGCCTCTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: KFIVNENNNVTLLEDRVLRIDSN*DSLSFL
Trigger: AAGAAAGGAGAGGCTATCCAAATTTGAATCTATTCG...CAGGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGATGATGATTCTTACATaGGGCTTATACCTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEMMILT*GLYLAR
Trigger: TCTTGCCAGGTATAAGCCCAATGTAAGAATCATCAT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCACATATGAAGTTTCATaGTGGCTTTGTCGTATCGTT +
Preference number: 5 (lower is better)
Translates to: INSLLMRTIMLLCWRTESTYEVS*WLCRIV
Trigger: AACGATACGACAAAGCCACAATGAAACTTCATATGT...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp ATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTCCATCAAACTCTATTTCTaGTTCTTTAGCAGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: INSLLMRTIMLLCWRTESIKLYF*FFSSRC
Trigger: ACAACGGCTGCTAAAGAACAAGAAATAGAGTTTGAT...GGACTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000504143.6
CDS-3UTR CAA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGTATGTGAGTTTTCTCTaGATGATAGTGAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEYVSFL*MIVSSF
Trigger: GAAAGAGCTCACTATCATCAAGAGAAAACTCACATA...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281092.9
ENST00000438717.6
ENST00000504143.6
CDS-3UTR CAA 90 bp GGTATAAATTCATTGTTAATGAGAACAATAATGTTACTCTGCTGGAGGACAGAGAAGAATATGTTGGCTTaGGCCTTAGATTACATGGAA +
Preference number: 5 (lower is better)
Translates to: GINSLLMRTIMLLCWRTEKNMLA*ALDYME
Trigger: TTCCATGTAATCTAAGGCCAAAGCCAACATATTCTT...CTCTGTCCTCCAGCAGAGTAACATTATTGTTCTCATTAACAATGAATTTATACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS-3UTR CAA 90 bp GGCAGGCAAGTTTATTTCTACCAGGTCAAATTATTTGTAAAAGGGAAATTCCTATTCCCTCAAATGTTATaGAAGACAAGGAACATTGCT +
Preference number: 5 (lower is better)
Translates to: GRQVYFYQVKLFVKGKFLFPQML*KTRNIA
Trigger: AGCAATGTTCCTTGTCTTCAATAACATTTGAGGGAA...TAGGAATTTCCCTTTTACAAATAATTTGACCTGGTAGAAATAAACTTGCCTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281092.9
CDS TCA 72 bp CGCGGCCGGGAAGTGGCCGGACCGGCGATGATAAGCTaGGGCCGCCTGGAAGGGACTACTCGGCGGGTCGGC +
Preference number: 6 (lower is better)
Translates to: RGREVAGPAMIS*GRLEGTTRRVG
Trigger: GCCGACCCGCCGAGTAGTCCCTTCCAGGCGGCCTCAGCTTATCATCGCCGGTCCGGCCACTTCCCGGCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS CCA 72 bp GGGGCCGGAGACGGACGAAGGCCTCACAGGAAACTTTaGGAGGCTCGCCTGGCCGCGGCCGGGAAGTGGCCG +
Preference number: 6 (lower is better)
Translates to: GAGDGRRPHRKL*EARLAAAGKWP
Trigger: CGGCCACTTCCCGGCCGCGGCCAGGCGAGCCTCCCAAAGTTTCCTGTGAGGCCTTCGTCCGTCTCCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS CAA 90 bp GTGGTGAGATGGGGCCGGAGACGGACGAAGGCCTCACAGGAAACTTaGGGAGGCTCGCCTGGCCGCGGCCGGGAAGTGGCCGGACCGGCG +
Preference number: 6 (lower is better)
Translates to: VVRWGRRRTKASQET*GGSPGRGREVAGPA
Trigger: CGCCGGTCCGGCCACTTCCCGGCCGCGGCCAGGCGAGCCTCCCAAAGTTTCCTGTGAGGCCTTCGTCCGTCTCCGGCCCCATCTCACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS CAA 72 bp TGGGGCCGGAGACGGACGAAGGCCTCACAGGAAACTTaGGGAGGCTCGCCTGGCCGCGGCCGGGAAGTGGCC +
Preference number: 6 (lower is better)
Translates to: WGRRRTKASQET*GGSPGRGREVA
Trigger: GGCCACTTCCCGGCCGCGGCCAGGCGAGCCTCCCAAAGTTTCCTGTGAGGCCTTCGTCCGTCTCCGGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS GCA 72 bp CTGCGCGTTTGTGCCGCTCTCCCCGCCTCGGTAACCTaGTCCTCCCTAGCGGGTGTCCTGGGCTGCCGTGGT +
Preference number: 6 (lower is better)
Translates to: LRVCAALPASVT*SSLAGVLGCRG
Trigger: ACCACGGCAGCCCAGGACACCCGCTAGGGAGGAGCAGGTTACCGAGGCGGGGAGAGCGGCACAAACGCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS GCA 72 bp TCGGTAACCTGCTCCTCCCTAGCGGGTGTCCTGGGCTaGCGTGGTGAGATGGGGCCGGAGACGGACGAAGGC +
Preference number: 6 (lower is better)
Translates to: SVTCSSLAGVLG*RGEMGPETDEG
Trigger: GCCTTCGTCCGTCTCCGGCCCCATCTCACCACGGCAGCCCAGGACACCCGCTAGGGAGGAGCAGGTTACCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS GCA 72 bp ATCAGCCCGGGTGGAGTCCCGAGGTCTGCGCGTTTGTaGCGCTCTCCCCGCCTCGGTAACCTGCTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: ISPGGVPRSARL*RSPRLGNLLLP
Trigger: AGGGAGGAGCAGGTTACCGAGGCGGGGAGAGCGGCACAAACGCGCAGACCTCGGGACTCCACCCGGGCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS CCA 72 bp GACGAAGGCCTCACAGGAAACTTTGGGAGGCTCGCCTaGCCGCGGCCGGGAAGTGGCCGGACCGGCGATGAT +
Preference number: 6 (lower is better)
Translates to: DEGLTGNFGRLA*PRPGSGRTGDD
Trigger: ATCATCGCCGGTCCGGCCACTTCCCGGCCGCGGCCAGGCGAGCCTCCCAAAGTTTCCTGTGAGGCCTTCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS CAA 72 bp CATATCAGCCCGGGTGGAGTCCCGAGGTCTGCGCGTTaGTGCCGCTCTCCCCGCCTCGGTAACCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: HISPGGVPRSAR*CRSPRLGNLLL
Trigger: GAGGAGCAGGTTACCGAGGCGGGGAGAGCGGCACAAACGCGCAGACCTCGGGACTCCACCCGGGCTGATATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513676.5
CDS GCA 72 bp CGGGAGTCTAGAATGCGTGGAGAACCCAAACGGGTCTaGTCTTCAGTGATGGCCGTTTCTGAAGCGTCCTTC +
Preference number: 6 (lower is better)
Translates to: RESRMRGEPKRV*SSVMAVSEASF
Trigger: GAAGGACGCTTCAGAAACGGCCATCACTGAAGAGCAGACCCGTTTGGGTTCTCCACGCATTCTAGACTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000509035.5
CDS TCA 72 bp GAATGCGTGGAGAACCCAAACGGGTCTGCTCTTCAGTaGTGGCCGTTTCTGAAGCGTCCTTCACCAAAAGAA +
Preference number: 6 (lower is better)
Translates to: ECVENPNGSALQ*WPFLKRPSPKE
Trigger: TTCTTTTGGTGAAGGACGCTTCAGAAACGGCCATCACTGAAGAGCAGACCCGTTTGGGTTCTCCACGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000509035.5
CDS TCA 72 bp ACCCAAACGGGTCTGCTCTTCAGTGATGGCCGTTTCTaGAGCGTCCTTCACCAAAAGAATTTGGTGAAAAAT +
Preference number: 6 (lower is better)
Translates to: TQTGLLFSDGRF*SVLHQKNLVKN
Trigger: ATTTTTCACCAAATTCTTTTGGTGAAGGACGCTTCAGAAACGGCCATCACTGAAGAGCAGACCCGTTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281092.9
ENST00000509035.5
CDS TCA 72 bp GATCTCTGTGGACTTCTGATGTGGAAGGCTCAGAGCTaGACATTAAAGCACATGTTTTACAGGATTGGGAGC +
Preference number: 6 (lower is better)
Translates to: DLCGLLMWKAQS*TLKHMFYRIGS
Trigger: GCTCCCAATCCTGTAAAACATGTGCTTTAATGTTCAGCTCTGAGCCTTCCACATCAGAAGTCCACAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505323.1
ENST00000618353.1
CDS CAA 72 bp ACTTCTTTTCCTCTGGGTGGATACCCAGTAGTGGGATaGCTGGATCAAATGGTAGTTCTACTTTTAGCTCTT +
Preference number: 6 (lower is better)
Translates to: TSFPLGGYPVVG*LDQMVVLLLAL
Trigger: AAGAGCTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCCACCCAGAGGAAAAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502752.1
CDS TCA 72 bp TGTGTCTTCATTATCCTACTAAGTTGTTCTGTCTGCTaGATCATAAGTAGCCAAGACTTGGATACGTTGCTG +
Preference number: 6 (lower is better)
Translates to: CVFIILLSCSVC*IISSQDLDTLL
Trigger: CAGCAACGTATCCAAGTCTTGGCTACTTATGATTCAGCAGACAGAACAACTTAGTAGGATAATGAAGACACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281092.9
ENST00000502752.1
ENST00000509035.5
ENST00000628534.1