Pregenerated sensors for FENDRR (Homo sapiens)
Ensembl gene IDs: ENSG00000268388Ensembl transcript IDs: ENST00000593604.2, ENST00000594398.1, ENST00000595886.1, ENST00000597578.1, ENST00000598996.3, ENST00000599749.5, ENST00000600553.5, ENST00000659025.1, ENST00000659486.1, ENST00000659545.1, ENST00000662100.1, ENST00000667117.1, ENST00000669311.1, ENST00000671115.1
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGCCCCCAGCCCGCACCCGAGCGCTGAGGTGGCAAGGGCAGGTCTaGGTGCGAGCCCCCTGCGGGCTGGCAGCCAGGTGCGCGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PPPARTRALRWQGQV*VRAPCGLAARCARA Trigger: GGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGTGCGGGCTGGGGGCGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENST00000593604.2 ENST00000595886.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 90 bp | GCGAGCCCCCTGCGGGCTGGCAGCCAGGTGCGCGAGGGCCGCCCTTaGCGGCGCTCCCAGCCCGCGCTGTCTGCTCTCAGGAACCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ASPLRAGSQVREGRP*RRSQPALSALRNLA Trigger: GGCCAGGTTCCTGAGAGCAGACAGCGCGGGCTGGGAGCGCCGGCAAGGGCGGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000593604.2 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000669311.1 |
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| CDS CCA 90 bp | TGCCGGCGCTCCCAGCCCGCGCTGTCTGCTCTCAGGAACCTGGCCTaGCGCGCAGTGTCAGAGGCCCCGCGGCGGCGGCAGGCCGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: CRRSQPALSALRNLA*RAVSEAPRRRQAEP Trigger: GGGCTCGGCCTGCCGCCGCCGCGGGGCCTCTGACACTGCGCGCCAGGCCAGGTTCCTGAGAGCAGACAGCGCGGGCTGGGAGCGCCGGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000599749.5 ENST00000659025.1 |
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| CDS CCA 90 bp | GCCCTTGCCGGCGCTCCCAGCCCGCGCTGTCTGCTCTCAGGAACCTaGCCTGGCGCGCAGTGTCAGAGGCCCCGCGGCGGCGGCAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: ALAGAPSPRCLLSGT*PGAQCQRPRGGGRP Trigger: CGGCCTGCCGCCGCCGCGGGGCCTCTGACACTGCGCGCCAGGCCAGGTTCCTGAGAGCAGACAGCGCGGGCTGGGAGCGCCGGCAAGGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000599749.5 ENST00000659025.1 |
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| CDS GCA 90 bp | ACCCGAGCGCTGAGGTGGCAAGGGCAGGTCTGCGTGCGAGCCCCCTaGGGGCTGGCAGCCAGGTGCGCGAGGGCCGCCCTTGCCGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: TRALRWQGQVCVRAP*GLAARCARAALAGA Trigger: AGCGCCGGCAAGGGCGGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000593604.2 ENST00000595886.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 90 bp | CCTTTCGTGGCTCCACCGCCCCCAGCCCGCACCCGAGCGCTGAGGTaGCAAGGGCAGGTCTGCGTGCGAGCCCCCTGCGGGCTGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PFVAPPPPARTRALR*QGQVCVRAPCGLAA Trigger: GGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGTGCGGGCTGGGGGCGGTGGAGCCACGAAAGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENST00000593604.2 ENST00000595886.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 90 bp | CTGGGTCTGTGCGCGCCGCGATGCGCCGGGGCTCCTGCGCTGTCCTaGGCTCCGCTCTCGGCACCACCTTTCGTGGCTCCACCGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LGLCAPRCAGAPALS*APLSAPPFVAPPPP Trigger: TGGGGGCGGTGGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000593604.2 ENST00000595886.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 90 bp | GCCCCACCTTCTGGGTCTGTGCGCGCCGCGATGCGCCGGGGCTCCTaGGCTGTCCTGCGCTCCGCTCTCGGCACCACCTTTCGTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: APPSGSVRAAMRRGS*AVLRSALGTTFRGS Trigger: GGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGAAGGTGGGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669311.1 |
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| CDS GCA 90 bp | CAGTTTCTCACTGGGTCTGTGCGCGCCGCGATGCGCCGGGGCTCCTaGGCTGTCCTGCGCTCCGCTCTCGGCACCACCTTTCGTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QFLTGSVRAAMRRGS*AVLRSALGTTFRGS Trigger: GGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGTGAGAAACTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597578.1 |
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| CDS GCA 90 bp | TTCACAAATCCTGGGTCTGTGCGCGCCGCGATGCGCCGGGGCTCCTaGGCTGTCCTGCGCTCCGCTCTCGGCACCACCTTTCGTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: FTNPGSVRAAMRRGS*AVLRSALGTTFRGS Trigger: GGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGGATTTGTGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS GCA 90 bp | CCCTCTCTGGTCTTCAGTTTCTCACTGGGTCTGTGCGCGCCGCGATaGGCCGGGGCTCCTGCGCTGTCCTGCGCTCCGCTCTCGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: PSLVFSFSLGLCAPR*AGAPALSCAPLSAP Trigger: TGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGTGAGAAACTGAAGACCAGAGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597578.1 |
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| CDS GCA 90 bp | GTAAACCACTCACCCTCTCTGGTCTTCAGTTTCTCACTGGGTCTGTaGGCGCCGCGATGCGCCGGGGCTCCTGCGCTGTCCTGCGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: VNHSPSLVFSFSLGL*APRCAGAPALSCAP Trigger: CGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597578.1 |
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| CDS TCA 90 bp | AGGGCATGGAAACCTCAGTCTTACCTGAGTCCAGGAGGGCATGGTTaGGGCCTCTGCAGGCCAGCTAGCATCCTCTGGGTGGGCCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: RAWKPQSYLSPGGHG*GLCRPASILWVGPG Trigger: CCCGGGGCCCACCCAGAGGATGCTAGCTGGCCTGCAGAGGCCTCAACCATGCCCTCCTGGACTCAGGTAAGACTGAGGTTTCCATGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 90 bp | CCTTGGATTCCGACCCAGGCGTCACCCTCTAGCGGCAATCTCAGTTaGATCCAGAGAACAGCGCCGAGGCCTCCCACTCCCAACCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: PWIPTQASPSSGNLS*IQRTAPRPPTPNRL Trigger: GAGACGGTTGGGAGTGGGAGGCCTCGGCGCTGTTCTCTGGATGCAACTGAGATTGCCGCTAGAGGGTGACGCCTGGGTCGGAATCCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594398.1 |
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| CDS TCA 90 bp | GGCAGGACTATCTCTGTGGCTGCAAGTCAGGAGACGGGTGACCTGTaGGTGGCGATAACAGGAGGGGGCTTCTGGAGGATGGAGATGATG | + |
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Preference number: 5 (lower is better) Translates to: GRTISVAASQETGDL*VAITGGGFWRMEMM Trigger: CATCATCTCCATCCTCCAGAAGCCCCCTCCTGTTATCGCCACTCACAGGTCACCCGTCTCCTGACTTGCAGCCACAGAGATAGTCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
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| CDS TCA 90 bp | GCAAGCTCTTCTGGCCTGTTAGTATGCAGGTCGAGGGAGGGGCCTTaGTTCACAATGGCTCAGTGCTCTCACCACCGGGCCCTAATGCAC | + |
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Preference number: 5 (lower is better) Translates to: ASSSGLLVCRSREGP*FTMAQCSHHRALMH Trigger: GTGCATTAGGGCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 90 bp | CCAACAGCAGCCAGCACCACTGATGGCCACGTGAGCAAGAAACCTTaGACGTTCAGCCCAGTTGAGCCTCTGAATGACTGCAGCCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: PTAASTTDGHVSKKP*TFSPVEPLNDCSPS Trigger: ACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCTCACGTGGCCATCAGTGGTGCTGGCTGCTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 90 bp | CTGCTGGCAGAGCTGGGCTTCGGGCTTTTGACGAGTAGGCTGCAGTaGCTTGGACAGAAGCAGCAGCTGCAAGATACCATCACTGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: LLAELGFGLLTSRLQ*LGQKQQLQDTITVS Trigger: CGACACAGTGATGGTATCTTGCAGCTGCTGCTTCTGTCCAAGGCACTGCAGCCTACTCGTCAAAAGCCCGAAGCCCAGCTCTGCCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000669311.1 |
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| CDS CCA 90 bp | TGGGCAATTTCCATTGAGGGGATGTACCTGCCACCGTCTGGTTTGTaGAGGAGAGAGTGCCCCTGGAATCCAACCCACAGGCAGGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: WAISIEGMYLPPSGL*RRECPWNPTHRQEP Trigger: AGGCTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 90 bp | GACTCTGACGGAGGGTGTGTTCCAGGTTCTTCCCACTCCCAGGGTTaGCAGCATCCTTGGCATTCCCCGGCTTGTAAAGGCATTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: DSDGGCVPGSSHSQG*QHPWHSPACKGISP Trigger: TGGAGAAATGCCTTTACAAGCCGGGGAATGCCAAGGATGCTGGCAACCCTGGGAGTGGGAAGAACCTGGAACACACCCTCCGTCAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 90 bp | GGGATGTACCTGCCACCGTCTGGTTTGTGGAGGAGAGAGTGCCCCTaGAATCCAACCCACAGGCAGGAGCCTAGGACCAAAATCAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GMYLPPSGLWRRECP*NPTHRQEPRTKIKQ Trigger: TTGCTTGATTTTGGTCCTAGGCTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 90 bp | AGAATTAGGCAGGACTATCTCTGTGGCTGCAAGTCAGGAGACGGGTaGCCTGTGAGTGGCGATAACAGGAGGGGGCTTCTGGAGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: RIRQDYLCGCKSGDG*PVSGDNRRGLLEDG Trigger: TCCATCCTCCAGAAGCCCCCTCCTGTTATCGCCACTCACAGGTCACCCGTCTCCTGACTTGCAGCCACAGAGATAGTCCTGCCTAATTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
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| CDS CCA 90 bp | CCGGCTTGTAAAGGCATTTCTCCAATGTCTGCCTCCACCATCACTTaGCCTTCTGTTTGTGCCTCCCTCCGTGCCCTTTCTCTGTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PACKGISPMSASTIT*PSVCASLRALSLCP Trigger: TGGGCACAGAGAAAGGGCACGGAGGGAGGCACAAACAGAAGGCCAAGTGATGGTGGAGGCAGACATTGGAGAAATGCCTTTACAAGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 90 bp | ACCAGATATAGAAAGGACCCAACAGATATTCGCAGTCCGGGCAGGTaGTTAGTGCCCAGCATTAGGGCGCCAATGCCTCCTGCCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: TRYRKDPTDIRSPGR*LVPSIRAPMPPASF Trigger: AAAGCTGGCAGGAGGCATTGGCGCCCTAATGCTGGGCACTAACCACCTGCCCGGACTGCGAATATCTGTTGGGTCCTTTCTATATCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 90 bp | TCGGGGTATGTGCAGAGAAGAGCTCCTTATGCAAGCATTCTTCAGTaGCTGCAGGCCATAGCTGCATGCAGGCAAACGCAATGCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SGYVQRRAPYASILQ*LQAIAACRQTQCQG Trigger: GCCTTGGCATTGCGTTTGCCTGCATGCAGCTATGGCCTGCAGCCACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCACATACCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659025.1 ENST00000669311.1 |
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| CDS TCA 90 bp | GCTCAGTCCTCATGGAGGGCTAGGTTGGGGTCAGTTGTGCCAAACTaGGTAAACCACTCACCCTCTCTGGTCTTCAGTTTCTCACTGGGT | + |
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Preference number: 5 (lower is better) Translates to: AQSSWRARLGSVVPN*VNHSPSLVFSFSLG Trigger: ACCCAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTACTCAGTTTGGCACAACTGACCCCAACCTAGCCCTCCATGAGGACTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597578.1 |
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| CDS GCA 90 bp | GTCTTTAGGGTGAAGTGTGGGCAATTTCCATTGAGGGGATGTACCTaGCACCGTCTGGTTTGTGGAGGAGAGAGTGCCCCTGGAATCCAA | + |
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Preference number: 5 (lower is better) Translates to: VFRVKCGQFPLRGCT*HRLVCGGESAPGIQ Trigger: TTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCACACTTCACCCTAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 90 bp | AGCCCAGTTGAGCCTCTGAATGACTGCAGCCCCAGTACCATCACATaGAACAGAAGAACTGCCCAACTGAGCCCATCCCATGCACCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SPVEPLNDCSPSTIT*NRRTAQLSPSHAPN Trigger: ATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 90 bp | CAACCCACAGGCAGGAGCCTAGGACCAAAATCAAGCAAGCTCTTCTaGCCTGTTAGTATGCAGGTCGAGGGAGGGGCCTTGATTCACAAT | + |
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Preference number: 5 (lower is better) Translates to: QPTGRSLGPKSSKLF*PVSMQVEGGALIHN Trigger: ATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGCTTGATTTTGGTCCTAGGCTCCTGCCTGTGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 90 bp | CAGCTGGATGGCCTCCAACAGCAGAAACATTTTCTTGCCCAGTTCTaGAGGCCAGAAGTCCGAAAGGTGATGAAGGGCCAGTTCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: QLDGLQQQKHFLAQF*RPEVRKVMKGQFLL Trigger: CAGAAGGAACTGGCCCTTCATCACCTTTCGGACTTCTGGCCTCCAGAACTGGGCAAGAAAATGTTTCTGCTGTTGGAGGCCATCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 90 bp | GCTCAGTCCTCATGGAGGGCTAGGTTGGGGTCAGTTGTGCCAAACTaGGTAAACCACTCACCCTCTCTGGTCTTCAGTTTCTCACTGTCA | + |
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Preference number: 5 (lower is better) Translates to: AQSSWRARLGSVVPN*VNHSPSLVFSFSLS Trigger: TGACAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTACTCAGTTTGGCACAACTGACCCCAACCTAGCCCTCCATGAGGACTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593604.2 |
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| CDS TCA 90 bp | GAGGCAAGGGCAGCAGGGCTCGGATTCTTAAATCCTTGTGGACTCTaGGCACACAATCCACTCTCCACAAGCAAGCATAGTGGACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: EARAAGLGFLNPCGL*AHNPLSTSKHSGLP Trigger: AGGAAGTCCACTATGCTTGCTTGTGGAGAGTGGATTGTGTGCTCAGAGTCCACAAGGATTTAAGAATCCGAGCCCTGCTGCCCTTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 90 bp | ACAACTGCAAACCAAAAGGTGCTTCGAGGAGCTGTCATCGTGAAGTaGCCGGCTGACGGGACTGTGTACTGGAAAGGAATCTGCAAACGG | + |
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Preference number: 5 (lower is better) Translates to: TTANQKVLRGAVIVK*PADGTVYWKGICKR Trigger: CCGTTTGCAGATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTTTGCAGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 90 bp | GCTACACAACTGCAAACCAAAAGGTGCTTCGAGGAGCTGTCATCGTaGAGTGACCGGCTGACGGGACTGTGTACTGGAAAGGAATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ATQLQTKRCFEELSS*SDRLTGLCTGKESA Trigger: TGCAGATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTTTGCAGTTGTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 90 bp | AGCAAGAAACCTTGCACGTTCAGCCCAGTTGAGCCTCTGAATGACTaGAGCCCCAGTACCATCACATGGAACAGAAGAACTGCCCAACTG | + |
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Preference number: 5 (lower is better) Translates to: SKKPCTFSPVEPLND*SPSTITWNRRTAQL Trigger: CAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 90 bp | GACAGAAGCAGCAGCTGCAAGATACCATCACTGTGTCGGGGTATGTaGAGAGAAGAGCTCCTTATGCAAGCATTCTTCAGTGGCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: DRSSSCKIPSLCRGM*REELLMQAFFSGCR Trigger: CCTGCAGCCACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCACATACCCCGACACAGTGATGGTATCTTGCAGCTGCTGCTTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000669311.1 |
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| CDS GCA 90 bp | AGATACCATCACTGTGTCGGGGTATGTGCAGAGAAGAGCTCCTTATaGAAGCATTCTTCAGTGGCTGCAGGCCATAGCTGCATGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RYHHCVGVCAEKSSL*KHSSVAAGHSCMQA Trigger: TGCCTGCATGCAGCTATGGCCTGCAGCCACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCACATACCCCGACACAGTGATGGTATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659025.1 ENST00000669311.1 |
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| CDS GCA 90 bp | AGATACCATCACTGTGTCGGGGTATGTGCAGAGAAGAGCTCCTTATaGAAGCATTCTTCAGTGGCTGCAGGCCATAGGTTGTTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RYHHCVGVCAEKSSL*KHSSVAAGHRLFRV Trigger: GACCCTGAACAACCTATGGCCTGCAGCCACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCACATACCCCGACACAGTGATGGTATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595886.1 |
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| CDS GCA 90 bp | TCTTCAGTGGCTGCAGGCCATAGGTTGTTCAGGGTCCACTGTAGTTaGGTTTTCTTTTATGTGCATGAAGTAATCCTGGGTCTGTGCGCG | + |
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Preference number: 5 (lower is better) Translates to: SSVAAGHRLFRVHCS*VFFYVHEVILGLCA Trigger: CGCGCACAGACCCAGGATTACTTCATGCACATAAAAGAAAACGCAACTACAGTGGACCCTGAACAACCTATGGCCTGCAGCCACTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000595886.1 |
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| CDS CCA 90 bp | GCCGGAGCTGATTTTCTCATTATCCCCATATGTCCAGGGTGGATTTaGAATCACATGGCTGGCAGGAACTCTTTCCAGCTGAGGAACAAG | + |
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Preference number: 5 (lower is better) Translates to: AGADFLIIPICPGWI*NHMAGRNSFQLRNK Trigger: CTTGTTCCTCAGCTGGAAAGAGTTCCTGCCAGCCATGTGATTCCAAATCCACCCTGGACATATGGGGATAATGAGAAAATCAGCTCCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 90 bp | GTGGATTCTCCACCAGGGACACTTGCTTGTCTACAAAGTGCATCATaGGACATGGGGTTGGATAACGCAGAGAGGATAATGCTCTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: VDSPPGTLACLQSAS*DMGLDNAERIMLSD Trigger: GTCAGAGAGCATTATCCTCTCTGCGTTATCCAACCCCATGTCCCATGATGCACTTTGTAGACAAGCAAGTGTCCCTGGTGGAGAATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS TCA 90 bp | ACTGCAGCCCCAGTACCATCACATGGAACAGAAGAACTGCCCAACTaGGCCCATCCCATGCACCAAATCCTGAGAAAGAAGAAAATGGTA | + |
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Preference number: 5 (lower is better) Translates to: TAAPVPSHGTEELPN*AHPMHQILRKKKMV Trigger: TACCATTTTCTTCTTTCTCAGGATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
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| CDS TCA 90 bp | TGGCCTGTAAATGCTCCGGTCAATACAGTGACAGTCTGGGACATCTaGATCCTGGTCTTAAGAAGGCTGAACGCTTCTAATTCCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: WPVNAPVNTVTVWDI*ILVLRRLNASNSLL Trigger: GAGGAGGGAATTAGAAGCGTTCAGCCTTCTTAAGACCAGGATTCAGATGTCCCAGACTGTCACTGTATTGACCGGAGCATTTACAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 90 bp | TTGCCTCAGCATTGGGTCCATTTTGATGGAGATGCTGACCTCGAATaGTCAGGGGACTGTGCCAACAAAGAGCTTTGTCTTCATCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LPQHWVHFDGDADLE*SGDCANKELCLHPQ Trigger: CTGAGGATGAAGACAAAGCTCTTTGTTGGCACAGTCCCCTGATCATTCGAGGTCAGCATCTCCATCAAAATGGACCCAATGCTGAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 90 bp | AGGGGGCTTCTGGAGGATGGAGATGATGTGTCTGGATGTGCACACTaGTCAGAGAATGTGTTTCCTTTGAGAAAGCTCATCGAGCCAATT | + |
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Preference number: 5 (lower is better) Translates to: RGLLEDGDDVSGCAH*SENVFPLRKLIEPI Trigger: AATTGGCTCGATGAGCTTTCTCAAAGGAAACACATTCTCTGAGCAGTGTGCACATCCAGACACATCATCTCCATCCTCCAGAAGCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
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| CDS GCA 90 bp | TTAGTGCCCAGCATTAGGGCGCCAATGCCTCCTGCCAGCTTTATCTaGTCACTGCATGAGTTTTGCCACTCACAGAATAAGAACAACCTT | + |
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Preference number: 5 (lower is better) Translates to: LVPSIRAPMPPASFI*SLHEFCHSQNKNNL Trigger: AAGGTTGTTCTTATTCTGTGAGTGGCAAAACTCATGCAGTGAGCAGATAAAGCTGGCAGGAGGCATTGGCGCCCTAATGCTGGGCACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 90 bp | AGCATATGCCACCCATTCCTGCCCAAGATGGAAAAATTACTAGGCTaGCCTGTAAATGCTCCGGTCAATACAGTGACAGTCTGGGACATC | + |
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Preference number: 5 (lower is better) Translates to: SICHPFLPKMEKLLG*PVNAPVNTVTVWDI Trigger: GATGTCCCAGACTGTCACTGTATTGACCGGAGCATTTACAGGCCAGCCTAGTAATTTTTCCATCTTGGGCAGGAATGGGTGGCATATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 90 bp | GGCAGTAGATATTGGACACTGATCCTTGCAACCAATGAGGATGTGTaGCTGTGGATTCTCCACCAGGGACACTTGCTTGTCTACAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: GSRYWTLILATNEDV*LWILHQGHLLVYKV Trigger: CACTTTGTAGACAAGCAAGTGTCCCTGGTGGAGAATCCACAGCCACACATCCTCATTGGTTGCAAGGATCAGTGTCCAATATCTACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS TCA 90 bp | AACGGTTTCATGCTGGACAAATGTGTGGGCCACTCACATTGTTGCTaGACAGCAGGATCTGTCTTTAGGGTGAAGTGTGGGCAATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: NGFMLDKCVGHSHCC*TAGSVFRVKCGQFP Trigger: TGGAAATTGCCCACACTTCACCCTAAAGACAGATCCTGCTGTTCAGCAACAATGTGAGTGGCCCACACATTTGTCCAGCATGAAACCGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 90 bp | CTTCTGTCCAGTCCTGTTCCACCTCCGTCCCTTCCCATGGCCTCTTaGCTTGGTTTTTCAGATGTAAATCCCATCTACATGTATTTCACT | + |
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Preference number: 5 (lower is better) Translates to: LLSSPVPPPSLPMAS*LGFSDVNPIYMYFT Trigger: AGTGAAATACATGTAGATGGGATTTACATCTGAAAAACCAAGGCAAGAGGCCATGGGAAGGGACGGAGGTGGAACAGGACTGGACAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593604.2 |
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| CDS GCA 90 bp | ATGCCAAAATGCAGTGGCTTTAAACAGCAGTCTTTCATTACTTCTTaGAGTTCCTGTAGGTCAGAAATTCGAGAGGAGCAGGGCTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: MPKCSGFKQQSFITS*SSCRSEIREEQGWA Trigger: CGCCCAGCCCTGCTCCTCTCGAATTTCTGACCTACAGGAACTGCAAGAAGTAATGAAAGACTGCTGTTTAAAGCCACTGCATTTTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000600553.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS GCA 90 bp | TTCTCCAAGCACAAAGTGTGCTCCTTCTGTGAATTCCTGAAGCCGTaGAGGCTCCTACTTCTAAGCTACACAACTGCAAACCAAAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: FSKHKVCSFCEFLKP*RLLLLSYTTANQKV Trigger: CACCTTTTGGTTTGCAGTTGTGTAGCTTAGAAGTAGGAGCCTGCACGGCTTCAGGAATTCACAGAAGGAGCACACTTTGTGCTTGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 90 bp | CCAGCATTAGGGCGCCAATGCCTCCTGCCAGCTTTATCTGCTCACTaGATGAGTTTTGCCACTCACAGAATAAGAACAACCTTGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: PALGRQCLLPALSAH*MSFATHRIRTTLHL Trigger: TAAATGCAAGGTTGTTCTTATTCTGTGAGTGGCAAAACTCATGCAGTGAGCAGATAAAGCTGGCAGGAGGCATTGGCGCCCTAATGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 90 bp | GTCCAGTCCTGTTCCACCTCCGTCCCTTCCCATGGCCTCTTGCCTTaGTTTTTCAGATGTAAATCCCATCTACATGTATTTCACTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: VQSCSTSVPSHGLLP*FFRCKSHLHVFHLV Trigger: TACCAAGTGAAATACATGTAGATGGGATTTACATCTGAAAAACCAAGGCAAGAGGCCATGGGAAGGGACGGAGGTGGAACAGGACTGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593604.2 |
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| CDS GCA 90 bp | GTGCCAACAAAGAGCTTTGTCTTCATCCTCAGGTTGGCTTTCTGGTaGTGTGACTTTGACCTGGGCAGTGAGTTTTTGTCTGAACAATTG | + |
|
Preference number: 5 (lower is better) Translates to: VPTKSFVFILRLAFW*CDFDLGSEFLSEQL Trigger: CAATTGTTCAGACAAAAACTCACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGATGAAGACAAAGCTCTTTGTTGGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 90 bp | AGATATTGGACACTGATCCTTGCAACCAATGAGGATGTGTGGCTGTaGATTCTCCACCAGGGACACTTGCTTGTCTACAAAGTGCATCAT | + |
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Preference number: 5 (lower is better) Translates to: RYWTLILATNEDVWL*ILHQGHLLVYKVHH Trigger: ATGATGCACTTTGTAGACAAGCAAGTGTCCCTGGTGGAGAATCCACAGCCACACATCCTCATTGGTTGCAAGGATCAGTGTCCAATATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 90 bp | GGCAGAGCTGGTTTTGACAGTGATGCAGTTGCTGGCAAATCCGTTTaGATCCAACATTGTCTTGAAATTTGGGTCACCTCTTCACAAATC | + |
|
Preference number: 5 (lower is better) Translates to: GRAGFDSDAVAGKSV*IQHCLEIWVTSSQI Trigger: GATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS GCA 90 bp | TTCTTTGCTTCTCTGTTTCCTACGTTGTTCAGGGTCCACTGTAGTTaGGTTTTCTTTTATGTGCATGAAGTAATCCTGGGTCTGTGCGCG | + |
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Preference number: 5 (lower is better) Translates to: FFASLFPTLFRVHCS*VFFYVHEVILGLCA Trigger: CGCGCACAGACCCAGGATTACTTCATGCACATAAAAGAAAACGCAACTACAGTGGACCCTGAACAACGTAGGAAACAGAGAAGCAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000659486.1 ENST00000671115.1 |
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| CDS CCA 90 bp | TTGTCTTCATCCTCAGGTTGGCTTTCTGGTGCTGTGACTTTGACCTaGGCAGTGAGTTTTTGTCTGAACAATTGTTTTGAGGGCATGGAA | + |
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Preference number: 5 (lower is better) Translates to: LSSSSGWLSGAVTLT*AVSFCLNNCFEGME Trigger: TTCCATGCCCTCAAAACAATTGTTCAGACAAAAACTCACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGATGAAGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 90 bp | AGGTTGCAGGATATTCCTATAATTAACTTCTCCAAGCACAAAGTGTaGTCCTTCTGTGAATTCCTGAAGCCGTGCAGGCTCCTACTTCTA | + |
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Preference number: 5 (lower is better) Translates to: RLQDIPIINFSKHKV*SFCEFLKPCRLLLL Trigger: TAGAAGTAGGAGCCTGCACGGCTTCAGGAATTCACAGAAGGAGCACACTTTGTGCTTGGAGAAGTTAATTATAGGAATATCCTGCAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 90 bp | CCATCAACAGTAGAATACTCTATGGTGGTGAAAATGAACAAACGATaGCTTCCATGCAGCAATCTGGGTGATGCTCATAAACACAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PSTVEYSMVVKMNKR*LPCSNLGDAHKHSP Trigger: TGGGCTGTGTTTATGAGCATCACCCAGATTGCTGCATGGAAGCCATCGTTTGTTCATTTTCACCACCATAGAGTATTCTACTGTTGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
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| CDS TCA 90 bp | CAAGGACTCAATTTGAGGGTGGTCTGTTATACGTTAAGAGATACCTaGAACAACCTCCAACAGAAATGCATGCAGAAGGTAGCCAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: QGLNLRVVCYTLRDT*NNLQQKCMQKVAKR Trigger: TCTCTTGGCTACCTTCTGCATGCATTTCTGTTGGAGGTTGTTTCAGGTATCTCTTAACGTATAACAGACCACCCTCAAATTGAGTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
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| CDS GCA 90 bp | CTCTACCCTAGTTCTAAATGCCCTGTGTTTAGAATGTGTTCAGGCTaGTCTGATCAGATTAAGAGCACTGCTGAACACACTTTTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LYPSSKCPVFRMCSG*SDQIKSTAEHTFPS Trigger: TGAAGGAAAAGTGTGTTCAGCAGTGCTCTTAATCTGATCAGAGCAGCCTGAACACATTCTAAACACAGGGCATTTAGAACTAGGGTAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 90 bp | TTGAACCTGGGCATTTACCTTCAGAATCTGAGTTTGTATCTATGGTaGTCTAGTGCCTCTACCCTAGTTCTAAATGCCCTGTGTTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LNLGIYLQNLSLYLW*SSASTLVLNALCLE Trigger: TTCTAAACACAGGGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 90 bp | GTGGCTTTAAATGCCAGGATTCCCTTCTCTTCTTCTCGGTGTTCATaGAGTTCTTTTGTAATTAATCCTTTTGACCAAGGAACTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: VALNARIPFSSSRCS*SSFVINPFDQGTLQ Trigger: CTGCAGAGTTCCTTGGTCAAAAGGATTAATTACAAAAGAACTCCATGAACACCGAGAAGAAGAGAAGGGAATCCTGGCATTTAAAGCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593604.2 |
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| CDS CCA 90 bp | GATTTGAACCTGGGCATTTACCTTCAGAATCTGAGTTTGTATCTATaGTGCTCTAGTGCCTCTACCCTAGTTCTAAATGCCCTGTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: DLNLGIYLQNLSLYL*CSSASTLVLNALCL Trigger: TAAACACAGGGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 90 bp | TCAGAAATACACACCGGGGTGTGTTACAATCATTTCTCAACCATTTaGGCTTTCGATGTACTTGTAGGTATGTTTATTTGGCCTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SEIHTGVCYNHFSTI*AFDVLVGMFIWPLA Trigger: AGCCAGAGGCCAAATAAACATACCTACAAGTACATCGAAAGCTCAAATGGTTGAGAAATGATTGTAACACACCCCGGTGTGTATTTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000667117.1 ENST00000671115.1 |
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| CDS CCA 90 bp | ATTTGCAAAGGCTACATAGCGTATGATTCCAACAATATGACATTCTaGGAAAGGCAAAACCATGGAGATGGTAAAAGGATCAGTGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: ICKGYIAYDSNNMTF*ERQNHGDGKRISGC Trigger: GCAACCACTGATCCTTTTACCATCTCCATGGTTTTGCCTTTCCCAGAATGTCATATTGTTGGAATCATACGCTATGTAGCCTTTGCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000671115.1 |
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| CDS CCA 90 bp | AAACTGAGTAAACCACTCACCCTCTCTGGTCTTCAGTTTCTCACTTaGTTTTTCAGATGTAAATCCCATCTACATGTATTTCACTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: KLSKPLTLSGLQFLT*FFRCKSHLHVFHLV Trigger: TACCAAGTGAAATACATGTAGATGGGATTTACATCTGAAAAACCAAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTACTCAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000594398.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS GCA 90 bp | GTAAATCCGATGTTTTCTGGTTATCTACGACTGCATAACAAATCATaGCAAAATGCAGTGGCTTTAAACAGCAGTCTTTCATTACTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VNPMFSGYLRLHNKS*QNAVALNSSLSLLL Trigger: AAGAAGTAATGAAAGACTGCTGTTTAAAGCCACTGCATTTTGGCATGATTTGTTATGCAGTCGTAGATAACCAGAAAACATCGGATTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000600553.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS CCA 72 bp | GGCAAGGGCAGGTCTGCGTGCGAGCCCCCTGCGGGCTaGCAGCCAGGTGCGCGAGGGCCGCCCTTGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: GKGRSACEPPAG*QPGARGPPLPA Trigger: CGCCGGCAAGGGCGGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000593604.2 ENST00000595886.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 72 bp | GCCCGCACCCGAGCGCTGAGGTGGCAAGGGCAGGTCTaGGTGCGAGCCCCCTGCGGGCTGGCAGCCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: ARTRALRWQGQV*VRAPCGLAARC Trigger: GCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGTGCGGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000593604.2 ENST00000595886.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 72 bp | TCCCAGCCCGCGCTGTCTGCTCTCAGGAACCTGGCCTaGCGCGCAGTGTCAGAGGCCCCGCGGCGGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SQPALSALRNLA*RAVSEAPRRRQ Trigger: CTGCCGCCGCCGCGGGGCCTCTGACACTGCGCGCCAGGCCAGGTTCCTGAGAGCAGACAGCGCGGGCTGGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000599749.5 ENST00000659025.1 |
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| CDS GCA 72 bp | CTCTTGCCCCACCTTCTGGGTCTGTGCGCGCCGCGATaGGCCGGGGCTCCTGCGCTGTCCTGCGCTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLPHLLGLCAPR*AGAPALSCAPL Trigger: GAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGAAGGTGGGGCAAGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669311.1 |
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| CDS GCA 72 bp | ACCTCTTCACAAATCCTGGGTCTGTGCGCGCCGCGATaGGCCGGGGCTCCTGCGCTGTCCTGCGCTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSSQILGLCAPR*AGAPALSCAPL Trigger: GAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGGATTTGTGAAGAGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS GCA 72 bp | GTGCATGAAGTAATCCTGGGTCTGTGCGCGCCGCGATaGGCCGGGGCTCCTGCGCTGTCCTGCGCTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VHEVILGLCAPR*AGAPALSCAPL Trigger: GAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGGATTACTTCATGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000595886.1 ENST00000659486.1 ENST00000671115.1 |
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| CDS GCA 72 bp | GTCTTCAGTTTCTCACTGGGTCTGTGCGCGCCGCGATaGGCCGGGGCTCCTGCGCTGTCCTGCGCTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VFSFSLGLCAPR*AGAPALSCAPL Trigger: GAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGTGAGAAACTGAAGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597578.1 |
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| CDS GCA 72 bp | TCACCCTCTCTGGTCTTCAGTTTCTCACTGGGTCTGTaGGCGCCGCGATGCGCCGGGGCTCCTGCGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSLVFSFSLGL*APRCAGAPALS Trigger: GGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGTGAGAAACTGAAGACCAGAGAGGGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597578.1 |
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| CDS GCA 72 bp | CCGACCCAGGCGTCACCCTCTAGCGGCAATCTCAGTTaGATCCAGAGAACAGCGCCGAGGCCTCCCACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PTQASPSSGNLS*IQRTAPRPPTP Trigger: GGGAGTGGGAGGCCTCGGCGCTGTTCTCTGGATGCAACTGAGATTGCCGCTAGAGGGTGACGCCTGGGTCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594398.1 |
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| CDS GCA 72 bp | GAGCAGGGCTGGGCGGCTGTGGCTCAGGATCTCTCATaGGCTCAGTCCTCATGGAGGGCTAGGTTGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EQGWAAVAQDLS*AQSSWRARLGS Trigger: TGACCCCAACCTAGCCCTCCATGAGGACTGAGCGCATGAGAGATCCTGAGCCACAGCCGCCCAGCCCTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000600553.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS TCA 72 bp | TCTGGCCTGTTAGTATGCAGGTCGAGGGAGGGGCCTTaGTTCACAATGGCTCAGTGCTCTCACCACCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGLLVCRSREGP*FTMAQCSHHRA Trigger: GGCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 72 bp | ACAGTGCACTGCTGGCAGAGCTGGGCTTCGGGCTTTTaGCGAGTAGGCTGCAGTGCCTTGGACAGAAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVHCWQSWASGF*RVGCSALDRSS Trigger: GCTGCTTCTGTCCAAGGCACTGCAGCCTACTCGTCAAAAGCCCGAAGCCCAGCTCTGCCAGCAGTGCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000669311.1 |
||
| CDS GCA 72 bp | GGAGGGTGTGTTCCAGGTTCTTCCCACTCCCAGGGTTaGCAGCATCCTTGGCATTCCCCGGCTTGTAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGCVPGSSHSQG*QHPWHSPACKG Trigger: GCCTTTACAAGCCGGGGAATGCCAAGGATGCTGGCAACCCTGGGAGTGGGAAGAACCTGGAACACACCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 72 bp | CTGCCACCGTCTGGTTTGTGGAGGAGAGAGTGCCCCTaGAATCCAACCCACAGGCAGGAGCCTAGGACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPPSGLWRRECP*NPTHRQEPRTK Trigger: TTTGGTCCTAGGCTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CAA 72 bp | CACAGTGCACTGCTGGCAGAGCTGGGCTTCGGGCTTTaGACGAGTAGGCTGCAGTGCCTTGGACAGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HSALLAELGFGL*TSRLQCLGQKQ Trigger: CTGCTTCTGTCCAAGGCACTGCAGCCTACTCGTCAAAAGCCCGAAGCCCAGCTCTGCCAGCAGTGCACTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000669311.1 |
||
| CDS CAA 90 bp | GTGTGGGCAATTTCCATTGAGGGGATGTACCTGCCACCGTCTGGTTaGTGGAGGAGAGAGTGCCCCTGGAATCCAACCCACAGGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VWAISIEGMYLPPSG*WRRECPWNPTHRQE Trigger: CTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CAA 90 bp | CTAAGAGCACACAGTGCACTGCTGGCAGAGCTGGGCTTCGGGCTTTaGACGAGTAGGCTGCAGTGCCTTGGACAGAAGCAGCAGCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LRAHSALLAELGFGL*TSRLQCLGQKQQLQ Trigger: TTGCAGCTGCTGCTTCTGTCCAAGGCACTGCAGCCTACTCGTCAAAAGCCCGAAGCCCAGCTCTGCCAGCAGTGCACTGTGTGCTCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000669311.1 |
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| CDS TCA 72 bp | ATCTCTGTGGCTGCAAGTCAGGAGACGGGTGACCTGTaGGTGGCGATAACAGGAGGGGGCTTCTGGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: ISVAASQETGDL*VAITGGGFWRM Trigger: CATCCTCCAGAAGCCCCCTCCTGTTATCGCCACTCACAGGTCACCCGTCTCCTGACTTGCAGCCACAGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
||
| CDS TCA 72 bp | CAGGACTATCTCTGTGGCTGCAAGTCAGGAGACGGGTaGCCTGTGAGTGGCGATAACAGGAGGGGGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QDYLCGCKSGDG*PVSGDNRRGLL Trigger: CAGAAGCCCCCTCCTGTTATCGCCACTCACAGGTCACCCGTCTCCTGACTTGCAGCCACAGAGATAGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
||
| CDS TCA 72 bp | AGCTCCCAACAGCAGCCAGCACCACTGATGGCCACGTaGGCAAGAAACCTTGCACGTTCAGCCCAGTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSQQQPAPLMAT*ARNLARSAQLS Trigger: GCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCTCACGTGGCCATCAGTGGTGCTGGCTGCTGTTGGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CCA 72 bp | TCCATTGAGGGGATGTACCTGCCACCGTCTGGTTTGTaGAGGAGAGAGTGCCCCTGGAATCCAACCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SIEGMYLPPSGL*RRECPWNPTHR Trigger: CCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CAA 72 bp | TTCTGGCCTGTTAGTATGCAGGTCGAGGGAGGGGCCTaGATTCACAATGGCTCAGTGCTCTCACCACCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FWPVSMQVEGGA*IHNGSVLSPPG Trigger: GCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CAA 72 bp | GGCTCTTACCTACTCCCCTGGAGAGGACCACCTAGGTaGTCTCCACTGCTAGGCTTCCCAAACCCCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSYLLPWRGPPR*SPLLGFPNPML Trigger: CAGCATGGGGTTTGGGAAGCCTAGCAGTGGAGACAACCTAGGTGGTCCTCTCCAGGGGAGTAGGTAAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CAA 90 bp | AGCAAGCTCTTCTGGCCTGTTAGTATGCAGGTCGAGGGAGGGGCCTaGATTCACAATGGCTCAGTGCTCTCACCACCGGGCCCTAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SKLFWPVSMQVEGGA*IHNGSVLSPPGPNA Trigger: TGCATTAGGGCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS GCA 72 bp | GCCAGCACCACTGATGGCCACGTGAGCAAGAAACCTTaGACGTTCAGCCCAGTTGAGCCTCTGAATGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASTTDGHVSKKP*TFSPVEPLNDC Trigger: GCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCTCACGTGGCCATCAGTGGTGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CCA 72 bp | GGCAGGAGCCTAGGACCAAAATCAAGCAAGCTCTTCTaGCCTGTTAGTATGCAGGTCGAGGGAGGGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GRSLGPKSSKLF*PVSMQVEGGAL Trigger: CAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGCTTGATTTTGGTCCTAGGCTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CCA 72 bp | AGAAAGGACCCAACAGATATTCGCAGTCCGGGCAGGTaGTTAGTGCCCAGCATTAGGGCGCCAATGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RKDPTDIRSPGR*LVPSIRAPMPP Trigger: AGGAGGCATTGGCGCCCTAATGCTGGGCACTAACCACCTGCCCGGACTGCGAATATCTGTTGGGTCCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS TCA 72 bp | GGTGCTTCGAGGAGCTGTCATCGTGAAGTGACCGGCTaGCGGGACTGTGTACTGGAAAGGAATCTGCAAACG | + |
|
Preference number: 6 (lower is better) Translates to: GASRSCHREVTG*RDCVLERNLQT Trigger: CGTTTGCAGATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS GCA 72 bp | TTAATCCTTTTGACCAAGGAACTCTGCAGAGCTTCCTaGCTCACGCCACAACCCACACTGGCCCCTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LILLTKELCRAS*LTPQPTLAPVR Trigger: CCTCACAGGGGCCAGTGTGGGTTGTGGCGTGAGGCAGGAAGCTCTGCAGAGTTCCTTGGTCAAAAGGATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593604.2 |
||
| CDS GCA 72 bp | GTGAAGTGTGGGCAATTTCCATTGAGGGGATGTACCTaGCACCGTCTGGTTTGTGGAGGAGAGAGTGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VKCGQFPLRGCT*HRLVCGGESAP Trigger: AGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCACACTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CAA 72 bp | ATTTCCATTGAGGGGATGTACCTGCCACCGTCTGGTTaGTGGAGGAGAGAGTGCCCCTGGAATCCAACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ISIEGMYLPPSG*WRRECPWNPTH Trigger: GTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 72 bp | CTGCAAACCAAAAGGTGCTTCGAGGAGCTGTCATCGTaGAGTGACCGGCTGACGGGACTGTGTACTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQTKRCFEELSS*SDRLTGLCTGK Trigger: CTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 72 bp | CTACTTAACTTTGAGGATGTAAACACAGAGGTCAGGTaGCTCGGGGGAGTCATGGTCACTTGGCGAGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLNFEDVNTEVR*LGGVMVTWRGG Trigger: GCCCCCTCGCCAAGTGACCATGACTCCCCCGAGTCACCTGACCTCTGTGTTTACATCCTCAAAGTTAAGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 72 bp | GTCAGCATGAAACAGAGCCATAGCTCACTGAGCGCATaGAGCCTATGCAGGGAGCAGGCTAAGGGTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: VSMKQSHSSLSA*SLCREQAKGFM Trigger: CATGAAACCCTTAGCCTGCTCCCTGCATAGGCTGCATGCGCTCAGTGAGCTATGGCTCTGTTTCATGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CAA 90 bp | GGATGTAAACACAGAGGTCAGGTGACTCGGGGGAGTCATGGTCACTaGGCGAGGGGGCTTGGATTTGAACCTGGGCATTTACCTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GCKHRGQVTRGSHGH*ARGLGFEPGHLPSE Trigger: TTCTGAAGGTAAATGCCCAGGTTCAAATCCAAGCCCCCTCGCCAAGTGACCATGACTCCCCCGAGTCACCTGACCTCTGTGTTTACATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS TCA 72 bp | AACCAAAAGGTGCTTCGAGGAGCTGTCATCGTGAAGTaGCCGGCTGACGGGACTGTGTACTGGAAAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: NQKVLRGAVIVK*PADGTVYWKGI Trigger: GATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 72 bp | CCTTGCACGTTCAGCCCAGTTGAGCCTCTGAATGACTaGAGCCCCAGTACCATCACATGGAACAGAAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: PCTFSPVEPLND*SPSTITWNRRT Trigger: AGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 72 bp | CTGCAGCCCCAGTACCATCACATGGAACAGAAGAACTaGCCAACTGAGCCCATCCCATGCACCAAATCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LQPQYHHMEQKN*PTEPIPCTKSL Trigger: TAAGGATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599749.5 |
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| CDS CCA 72 bp | AAAGGCATTTCTCCAATGTCTGCCTCCACCATCACTTaGCCTTCTGTTTGTGCCTCCCTCCGTGCCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KGISPMSASTIT*PSVCASLRALS Trigger: AGAAAGGGCACGGAGGGAGGCACAAACAGAAGGCCAAGTGATGGTGGAGGCAGACATTGGAGAAATGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 72 bp | TCCCGGCTCGCATGTGCGTTTGGCAAACGTTCGCATTaGTTTAGCATCAAGAAATGGCTTCCACGGGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRLACAFGKRSH*FSIKKWLPRED Trigger: ATCCTCCCGTGGAAGCCATTTCTTGATGCTAAACCAATGCGAACGTTTGCCAAACGCACATGCGAGCCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000667117.1 ENST00000671115.1 |
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| CDS CCA 72 bp | GTGCAGAGAAGAGCTCCTTATGCAAGCATTCTTCAGTaGCTGCAGGCCATAGCTGCATGCAGGCAAACGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VQRRAPYASILQ*LQAIAACRQTQ Trigger: TTGCGTTTGCCTGCATGCAGCTATGGCCTGCAGCCACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659025.1 ENST00000669311.1 |
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| CDS CAA 72 bp | GGGGGAGTCATGGTCACTTGGCGAGGGGGCTTGGATTaGAACCTGGGCATTTACCTTCAGAATCTGAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGVMVTWRGGLD*NLGIYLQNLSL Trigger: CAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAAATCCAAGCCCCCTCGCCAAGTGACCATGACTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CAA 90 bp | GACCTCCAGGGAAACACCCCAGGTGCACAGGCTCAGAGCAGCAGGTaGCAGGATATTCCTATAATTAACTTCTCCAAGCACAAAGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DLQGNTPGAQAQSSR*QDIPIINFSKHKVC Trigger: GCACACTTTGTGCTTGGAGAAGTTAATTATAGGAATATCCTGCAACCTGCTGCTCTGAGCCTGTGCACCTGGGGTGTTTCCCTGGAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 72 bp | GGGCGCCAATGCCTCCTGCCAGCTTTATCTGCTCACTaGATGAGTTTTGCCACTCACAGAATAAGAACAACC | + |
|
Preference number: 6 (lower is better) Translates to: GRQCLLPALSAH*MSFATHRIRTT Trigger: GGTTGTTCTTATTCTGTGAGTGGCAAAACTCATGCAGTGAGCAGATAAAGCTGGCAGGAGGCATTGGCGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 72 bp | AGGATGTGTGGCTGTGGATTCTCCACCAGGGACACTTaGTTGTCTACAAAGTGCATCATGGGACATGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RMCGCGFSTRDT*LSTKCIMGHGV Trigger: AACCCCATGTCCCATGATGCACTTTGTAGACAAGCAAGTGTCCCTGGTGGAGAATCCACAGCCACACATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 72 bp | TTATGCAAGCATTCTTCAGTGGCTGCAGGCCATAGCTaGATGCAGGCAAACGCAATGCCAAGGCATGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCKHSSVAAGHS*MQANAMPRHVC Trigger: ACACACATGCCTTGGCATTGCGTTTGCCTGCATGCAGCTATGGCCTGCAGCCACTGAAGAATGCTTGCATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659025.1 ENST00000669311.1 |
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| CDS CCA 72 bp | GTGCAGAGAAGAGCTCCTTATGCAAGCATTCTTCAGTaGCTGCAGGCCATAGGTTGTTCAGGGTCCACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VQRRAPYASILQ*LQAIGCSGSTV Trigger: TACAGTGGACCCTGAACAACCTATGGCCTGCAGCCACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595886.1 |
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| CDS CCA 72 bp | CTGTGCCAACAAAGAGCTTTGTCTTCATCCTCAGGTTaGCTTTCTGGTGCTGTGACTTTGACCTGGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LCQQRALSSSSG*LSGAVTLTWAV Trigger: CACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGATGAAGACAAAGCTCTTTGTTGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 72 bp | CAGATGGAAAAACAGTCCCACAGCTGCTGTCAGAGGTaGAATCTAGCCCACTCTGAGGCCAAAACCTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: QMEKQSHSCCQR*NLAHSEAKTST Trigger: AGTAGAGGTTTTGGCCTCAGAGTGGGCTAGATTCCACCTCTGACAGCAGCTGTGGGACTGTTTTTCCATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CAA 72 bp | CCTCGAATGATCAGGGGACTGTGCCAACAAAGAGCTTaGTCTTCATCCTCAGGTTGGCTTTCTGGTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRMIRGLCQQRA*SSSSGWLSGAV Trigger: CACAGCACCAGAAAGCCAACCTGAGGATGAAGACAAAGCTCTTTGTTGGCACAGTCCCCTGATCATTCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CAA 72 bp | ATGTGTGGCTGTGGATTCTCCACCAGGGACACTTGCTaGTCTACAAAGTGCATCATGGGACATGGGGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: MCGCGFSTRDTC*STKCIMGHGVG Trigger: TCCAACCCCATGTCCCATGATGCACTTTGTAGACAAGCAAGTGTCCCTGGTGGAGAATCCACAGCCACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CAA 90 bp | GATCAGGGGACTGTGCCAACAAAGAGCTTTGTCTTCATCCTCAGGTaGGCTTTCTGGTGCTGTGACTTTGACCTGGGCAGTGAGTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DQGTVPTKSFVFILR*AFWCCDFDLGSEFL Trigger: CAAAAACTCACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGATGAAGACAAAGCTCTTTGTTGGCACAGTCCCCTGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS TCA 72 bp | CCAGTACCATCACATGGAACAGAAGAACTGCCCAACTaGGCCCATCCCATGCACCAAATCCTGAGAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PVPSHGTEELPN*AHPMHQILRKK Trigger: CTTCTTTCTCAGGATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
||
| CDS TCA 72 bp | GCAGCAGGGCTCGGATTCTTAAATCCTTGTGGACTCTaGGCACACAATCCACTCTCCACAAGCAAGCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: AAGLGFLNPCGL*AHNPLSTSKHS Trigger: ACTATGCTTGCTTGTGGAGAGTGGATTGTGTGCTCAGAGTCCACAAGGATTTAAGAATCCGAGCCCTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS TCA 72 bp | ATGCTGGACAAATGTGTGGGCCACTCACATTGTTGCTaGACAGCAGGATCTGTCTTTAGGGTGAAGTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MLDKCVGHSHCC*TAGSVFRVKCG Trigger: CCCACACTTCACCCTAAAGACAGATCCTGCTGTTCAGCAACAATGTGAGTGGCCCACACATTTGTCCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS GCA 72 bp | AGCATTAGGGCGCCAATGCCTCCTGCCAGCTTTATCTaGTCACTGCATGAGTTTTGCCACTCACAGAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: SIRAPMPPASFI*SLHEFCHSQNK Trigger: CTTATTCTGTGAGTGGCAAAACTCATGCAGTGAGCAGATAAAGCTGGCAGGAGGCATTGGCGCCCTAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 72 bp | CCACCAGGGACACTTGCTTGTCTACAAAGTGCATCATaGGACATGGGGTTGGATAACGCAGAGAGGATAATG | + |
|
Preference number: 6 (lower is better) Translates to: PPGTLACLQSAS*DMGLDNAERIM Trigger: CATTATCCTCTCTGCGTTATCCAACCCCATGTCCCATGATGCACTTTGTAGACAAGCAAGTGTCCCTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 72 bp | TATTGGACACTGATCCTTGCAACCAATGAGGATGTGTaGCTGTGGATTCTCCACCAGGGACACTTGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YWTLILATNEDV*LWILHQGHLLV Trigger: GACAAGCAAGTGTCCCTGGTGGAGAATCCACAGCCACACATCCTCATTGGTTGCAAGGATCAGTGTCCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
||
| CDS CAA 72 bp | CAGTCCTGTTCCACCTCCGTCCCTTCCCATGGCCTCTaGCCTTGGTTTTTCAGATGTAAATCCCATCTACAT | + |
|
Preference number: 6 (lower is better) Translates to: QSCSTSVPSHGL*PWFFRCKSHLH Trigger: ATGTAGATGGGATTTACATCTGAAAAACCAAGGCAAGAGGCCATGGGAAGGGACGGAGGTGGAACAGGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593604.2 |
||
| CDS CAA 90 bp | CCAGGGACACTTGCTTGTCTACAAAGTGCATCATGGGACATGGGGTaGGATAACGCAGAGAGGATAATGCTCTCTGACTCAAATCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGTLACLQSASWDMG*DNAERIMLSDSNHA Trigger: GGCATGATTTGAGTCAGAGAGCATTATCCTCTCTGCGTTATCCAACCCCATGTCCCATGATGCACTTTGTAGACAAGCAAGTGTCCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
||
| CDS GCA 72 bp | GCCCAAGATGGAAAAATTACTAGGCTGGCCTGTAAATaGTCCGGTCAATACAGTGACAGTCTGGGACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: AQDGKITRLACK*SGQYSDSLGHL Trigger: CAGATGTCCCAGACTGTCACTGTATTGACCGGAGCATTTACAGGCCAGCCTAGTAATTTTTCCATCTTGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS GCA 72 bp | CACAAAGTGTGCTCCTTCTGTGAATTCCTGAAGCCGTaGAGGCTCCTACTTCTAAGCTACACAACTGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HKVCSFCEFLKP*RLLLLSYTTAN Trigger: GTTTGCAGTTGTGTAGCTTAGAAGTAGGAGCCTGCACGGCTTCAGGAATTCACAGAAGGAGCACACTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS GCA 72 bp | AGCAGCTGCAAGATACCATCACTGTGTCGGGGTATGTaGAGAGAAGAGCTCCTTATGCAAGCATTCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSCKIPSLCRGM*REELLMQAFFS Trigger: ACTGAAGAATGCTTGCATAAGGAGCTCTTCTCTGCACATACCCCGACACAGTGATGGTATCTTGCAGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000669311.1 |
||
| CDS CCA 72 bp | GGCAAATCCGTTTGCATCCAACATTGTCTTGAAATTTaGGTCACCTCTTCACAAATCCTGGGTCTGTGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GKSVCIQHCLEI*VTSSQILGLCA Trigger: CGCGCACAGACCCAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
||
| CDS CCA 72 bp | CACCCATTCCTGCCCAAGATGGAAAAATTACTAGGCTaGCCTGTAAATGCTCCGGTCAATACAGTGACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HPFLPKMEKLLG*PVNAPVNTVTV Trigger: GACTGTCACTGTATTGACCGGAGCATTTACAGGCCAGCCTAGTAATTTTTCCATCTTGGGCAGGAATGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CAA 72 bp | AAGACACGGGCAGAGCTGGTTTTGACAGTGATGCAGTaGCTGGCAAATCCGTTTGCATCCAACATTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KTRAELVLTVMQ*LANPFASNIVL Trigger: CAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCCCGTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
||
| CDS CAA 72 bp | TCTGGATGTGCACACTGCTCAGAGAATGTGTTTCCTTaGAGAAAGCTCATCGAGCCAATTGGTGGACGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGCAHCSENVFP*RKLIEPIGGRL Trigger: GAGACGTCCACCAATTGGCTCGATGAGCTTTCTCAAAGGAAACACATTCTCTGAGCAGTGTGCACATCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
||
| CDS CAA 90 bp | TATCTTCGGAAGACACGGGCAGAGCTGGTTTTGACAGTGATGCAGTaGCTGGCAAATCCGTTTGCATCCAACATTGTCTTGAAATTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YLRKTRAELVLTVMQ*LANPFASNIVLKFG Trigger: CCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCCCGTGTCTTCCGAAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
||
| CDS CAA 90 bp | GGGGGCTTGGATTTGAACCTGGGCATTTACCTTCAGAATCTGAGTTaGTATCTATGGTGCTCTAGTGCCTCTACCCTAGTTCTAAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGLDLNLGIYLQNLS*YLWCSSASTLVLNA Trigger: GGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAAATCCAAGCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CAA 90 bp | AGAGCTTTGTCTTCATCCTCAGGTTGGCTTTCTGGTGCTGTGACTTaGACCTGGGCAGTGAGTTTTTGTCTGAACAATTGTTTTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RALSSSSGWLSGAVT*TWAVSFCLNNCFEG Trigger: GCCCTCAAAACAATTGTTCAGACAAAAACTCACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGATGAAGACAAAGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
||
| CDS TCA 72 bp | CATTGGGTCCATTTTGATGGAGATGCTGACCTCGAATaGTCAGGGGACTGTGCCAACAAAGAGCTTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HWVHFDGDADLE*SGDCANKELCL Trigger: AAGACAAAGCTCTTTGTTGGCACAGTCCCCTGATCATTCGAGGTCAGCATCTCCATCAAAATGGACCCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 72 bp | CTGGAGGATGGAGATGATGTGTCTGGATGTGCACACTaGTCAGAGAATGTGTTTCCTTTGAGAAAGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LEDGDDVSGCAH*SENVFPLRKLI Trigger: GATGAGCTTTCTCAAAGGAAACACATTCTCTGAGCAGTGTGCACATCCAGACACATCATCTCCATCCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
||
| CDS CCA 72 bp | GATTTTCTCATTATCCCCATATGTCCAGGGTGGATTTaGAATCACATGGCTGGCAGGAACTCTTTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DFLIIPICPGWI*NHMAGRNSFQL Trigger: CAGCTGGAAAGAGTTCCTGCCAGCCATGTGATTCCAAATCCACCCTGGACATATGGGGATAATGAGAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CAA 72 bp | GTCTTAAGAAGGCTGAACGCTTCTAATTCCCTCCTCTaGGAATCCAGCCTCTGTATTGTTAGAAGCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLRRLNASNSLL*ESSLCIVRSLS Trigger: GCTCAGGCTTCTAACAATACAGAGGCTGGATTCCAAGAGGAGGGAATTAGAAGCGTTCAGCCTTCTTAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
||
| CDS CAA 90 bp | ATGTATTTCACTTGGTATCTTCGGAAGACACGGGCAGAGCTGGTTTaGACAGTGATGCAGTTGCTGGCAAATCCGTTTGCATCCAACATT | + |
|
Preference number: 6 (lower is better) Translates to: MYFTWYLRKTRAELV*TVMQLLANPFASNI Trigger: AATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCCCGTGTCTTCCGAAGATACCAAGTGAAATACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS CAA 90 bp | ACAGTGATGCAGTTGCTGGCAAATCCGTTTGCATCCAACATTGTCTaGAAATTTGGGTCACCTCTTCACAAATCCTTGGATTCCGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVMQLLANPFASNIV*KFGSPLHKSLDSDP Trigger: TGGGTCGGAATCCAAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594398.1 |
||
| CDS TCA 72 bp | AGCAATCTGGGTGATGCTCATAAACACAGCCCAGAGTaGAAGAAGCCAAGCCCATTCTGTATGATTCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SNLGDAHKHSPE*KKPSPFCMIPF Trigger: AAACGGAATCATACAGAATGGGCTTGGCTTCTTTCACTCTGGGCTGTGTTTATGAGCATCACCCAGATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000593604.2 ENST00000598996.3 |
||
| CDS TCA 72 bp | AATGCTCCGGTCAATACAGTGACAGTCTGGGACATCTaGATCCTGGTCTTAAGAAGGCTGAACGCTTCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: NAPVNTVTVWDI*ILVLRRLNASN Trigger: ATTAGAAGCGTTCAGCCTTCTTAAGACCAGGATTCAGATGTCCCAGACTGTCACTGTATTGACCGGAGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 72 bp | TGTTCCACCTCCGTCCCTTCCCATGGCCTCTTGCCTTaGTTTTTCAGATGTAAATCCCATCTACATGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: CSTSVPSHGLLP*FFRCKSHLHVF Trigger: AAATACATGTAGATGGGATTTACATCTGAAAAACCAAGGCAAGAGGCCATGGGAAGGGACGGAGGTGGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593604.2 |
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| CDS CCA 72 bp | GGCAAATCCGTTTGCATCCAACATTGTCTTGAAATTTaGGTCACCTCTTCACAAATCCTTGGATTCCGACCC | + |
|
Preference number: 6 (lower is better) Translates to: GKSVCIQHCLEI*VTSSQILGFRP Trigger: GGGTCGGAATCCAAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594398.1 |
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| CDS CCA 72 bp | TCCTCAGGTTGGCTTTCTGGTGCTGTGACTTTGACCTaGGCAGTGAGTTTTTGTCTGAACAATTGTTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSGWLSGAVTLT*AVSFCLNNCFE Trigger: CTCAAAACAATTGTTCAGACAAAAACTCACTGCCCAGGTCAAAGTCACAGCACCAGAAAGCCAACCTGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS CCA 72 bp | AGGCAGGATTCAGTGCTGTCGATAAGCAAAAACTCCTaGCTGTGTTCAGTCCACCTCAAATGCATTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RQDSVLSISKNS*LCSVHLKCIFH Trigger: ATGGAAAATGCATTTGAGGTGGACTGAACACAGCCAGGAGTTTTTGCTTATCGACAGCACTGAATCCTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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| CDS GCA 72 bp | GGTTTTGACAGTGATGCAGTTGCTGGCAAATCCGTTTaGATCCAACATTGTCTTGAAATTTGGGTCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFDSDAVAGKSV*IQHCLEIWVTS Trigger: AGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000598996.3 ENST00000599749.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS GCA 72 bp | TGCAGTGGCTTTAAACAGCAGTCTTTCATTACTTCTTaGAGTTCCTGTAGGTCAGAAATTCGAGAGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CSGFKQQSFITS*SSCRSEIREEQ Trigger: CTGCTCCTCTCGAATTTCTGACCTACAGGAACTGCAAGAAGTAATGAAAGACTGCTGTTTAAAGCCACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000593604.2 ENST00000594398.1 ENST00000597578.1 ENST00000598996.3 ENST00000599749.5 ENST00000600553.5 ENST00000659025.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 |
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| CDS GCA 72 bp | GGCATTTACCTTCAGAATCTGAGTTTGTATCTATGGTaGTCTAGTGCCTCTACCCTAGTTCTAAATGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GIYLQNLSLYLW*SSASTLVLNAL Trigger: CAGGGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CCA 72 bp | CTGGGCATTTACCTTCAGAATCTGAGTTTGTATCTATaGTGCTCTAGTGCCTCTACCCTAGTTCTAAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGIYLQNLSLYL*CSSASTLVLNA Trigger: GGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CAA 90 bp | ACCTCAAATGCATTTTCCATCTTCTTAACAGTGATGTTCTCCTTCTaGCCTCAGCATTGGGTCCATTTTGATGGAGATGCTGACCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: TSNAFSIFLTVMFSF*PQHWVHFDGDADLE Trigger: TTCGAGGTCAGCATCTCCATCAAAATGGACCCAATGCTGAGGCAAGAAGGAGAACATCACTGTTAAGAAGATGGAAAATGCATTTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659486.1 ENST00000662100.1 ENST00000669311.1 |
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| CDS TCA 72 bp | CTCACCCTCTCTGGTCTTCAGTTTCTCACTGTCAATTaGGAGAAGGAGACAAGACCATATCAAGTTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LTLSGLQFLTVN*EKETRPYQVSL Trigger: CAAAGAAACTTGATATGGTCTTGTCTCCTTCTCTCAATTGACAGTGAGAAACTGAAGACCAGAGAGGGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593604.2 |
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| CDS TCA 72 bp | AAATCTATATTCGTTTTCTGTGGCAACCATAACAAATaGCCACCAGCTGGATGGCCTCCAACAGCAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: KSIFVFCGNHNK*PPAGWPPTAET Trigger: TGTTTCTGCTGTTGGAGGCCATCCAGCTGGTGGTCATTTGTTATGGTTGCCACAGAAAACGAATATAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000598996.3 ENST00000599749.5 |
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| CDS CAA 72 bp | CAGTTGCTGGCAAATCCGTTTGCATCCAACATTGTCTaGAAATTTGGGTCACCTCTTCACAAATCCTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QLLANPFASNIV*KFGSPLHKSLD Trigger: ATCCAAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594398.1 |
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| CDS CAA 90 bp | CTCAGAAATACACACCGGGGTGTGTTACAATCATTTCTCAACCATTaGAGCTTTCGATGTACTTGTAGGTATGTTTATTTGGCCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRNTHRGVLQSFLNH*SFRCTCRYVYLASG Trigger: GCCAGAGGCCAAATAAACATACCTACAAGTACATCGAAAGCTCAAATGGTTGAGAAATGATTGTAACACACCCCGGTGTGTATTTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000667117.1 ENST00000671115.1 |
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| CDS TCA 72 bp | GGAAAACTAGTTCAGCTCTGTGTATATTATGCCACATaGAAGCAGTTTTGCCTTCATTTGTGGCTGCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GKLVQLCVYYAT*KQFCLHLWLPD Trigger: ATCAGGCAGCCACAAATGAAGGCAAAACTGCTTTCATGTGGCATAATATACACAGAGCTGAACTAGTTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000667117.1 ENST00000671115.1 |
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| CDS CAA 72 bp | ACTCACCCTCTCTGGTCTTCAGTTTCTCACTGTCAATaGAGAGAAGGAGACAAGACCATATCAAGTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: THPLWSSVSHCQ*REGDKTISSFF Trigger: AAAGAAACTTGATATGGTCTTGTCTCCTTCTCTCAATTGACAGTGAGAAACTGAAGACCAGAGAGGGTGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593604.2 |
||
| CDS CAA 90 bp | TCTGCTCACTGCATGAGTTTTGCCACTCACAGAATAAGAACAACCTaGCATTTAGAACTTCACTCGTATATTCTATTGTGCCATCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SAHCMSFATHRIRTT*HLELHSYILLCHHV Trigger: CACATGATGGCACAATAGAATATACGAGTGAAGTTCTAAATGCAAGGTTGTTCTTATTCTGTGAGTGGCAAAACTCATGCAGTGAGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
||
| CDS TCA 72 bp | CACACCGGGGTGTGTTACAATCATTTCTCAACCATTTaGGCTTTCGATGTACTTGTAGGTATGTTTATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HTGVCYNHFSTI*AFDVLVGMFIW Trigger: CCAAATAAACATACCTACAAGTACATCGAAAGCTCAAATGGTTGAGAAATGATTGTAACACACCCCGGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000667117.1 ENST00000671115.1 |
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| CDS CCA 72 bp | AATGCCAGGATTCCCTTCTCTTCTTCTCGGTGTTCATaGAGTTCTTTTGTAATTAATCCTTTTGACCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: NARIPFSSSRCS*SSFVINPFDQG Trigger: TCCTTGGTCAAAAGGATTAATTACAAAAGAACTCCATGAACACCGAGAAGAAGAGAAGGGAATCCTGGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593604.2 |
||
| CDS CCA 72 bp | TGTGTTTCCTTTGAGAAAGCTCATCGAGCCAATTGGTaGACGTCTCTGTGTGTATGTGATGTTTCAATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: CVSFEKAHRANW*TSLCVCDVSIK Trigger: TTTTATTGAAACATCACATACACACAGAGACGTCCACCAATTGGCTCGATGAGCTTTCTCAAAGGAAACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593604.2 ENST00000597578.1 ENST00000598996.3 |
||
| CDS CAA 72 bp | CATTTGAGCTTTCGATGTACTTGTAGGTATGTTTATTaGGCCTCTGGCTGCGTTTTTCACTTAAAAATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HLSFRCTCRYVY*ASGCVFHLKIR Trigger: CCTGATTTTTAAGTGAAAAACGCAGCCAGAGGCCAAATAAACATACCTACAAGTACATCGAAAGCTCAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000667117.1 ENST00000671115.1 |
||
| CDS CAA 72 bp | ACACACCGGGGTGTGTTACAATCATTTCTCAACCATTaGAGCTTTCGATGTACTTGTAGGTATGTTTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: THRGVLQSFLNH*SFRCTCRYVYL Trigger: CAAATAAACATACCTACAAGTACATCGAAAGCTCAAATGGTTGAGAAATGATTGTAACACACCCCGGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000667117.1 ENST00000671115.1 |
||
| CDS CAA 90 bp | TTTCTCAACCATTTGAGCTTTCGATGTACTTGTAGGTATGTTTATTaGGCCTCTGGCTGCGTTTTTCACTTAAAAATCAGGATCACATGT | + |
|
Preference number: 6 (lower is better) Translates to: FLNHLSFRCTCRYVY*ASGCVFHLKIRITC Trigger: ACATGTGATCCTGATTTTTAAGTGAAAAACGCAGCCAGAGGCCAAATAAACATACCTACAAGTACATCGAAAGCTCAAATGGTTGAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659545.1 ENST00000667117.1 ENST00000671115.1 |
||
| CDS CAA 72 bp | TGCATGAGTTTTGCCACTCACAGAATAAGAACAACCTaGCATTTAGAACTTCACTCGTATATTCTATTGTGC | + |
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Preference number: 6 (lower is better) Translates to: CMSFATHRIRTT*HLELHSYILLC Trigger: GCACAATAGAATATACGAGTGAAGTTCTAAATGCAAGGTTGTTCTTATTCTGTGAGTGGCAAAACTCATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000595886.1 ENST00000659025.1 ENST00000659486.1 ENST00000659545.1 ENST00000662100.1 ENST00000667117.1 ENST00000669311.1 ENST00000671115.1 |
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