Pregenerated sensors for FEN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000168496

Ensembl transcript IDs: ENST00000305885.3, ENST00000535307.1, ENST00000535723.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	CAAGACACAGCCAGTAATCAGTCACAAACACAGACACAGCCAACTCCAGGGGCTCAGAGGAGGGATGACTaGCCTTTGGGACACGCGGCC	+
Preference number: 4 (lower is better) Translates to: QDTASNQSQTQTQPTPGAQRRDD*PLGHAA Trigger: GGCCGCGTGTCCCAAAGGCCAGTCATCCCTCCTCTG...AGCCCCTGGAGTTGGCTGTGTCTGTGTTTGTGACTGATTACTGGCTGTGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305885.3
CDS-3UTR GCA 90 bp	CCCACCCAAGACACAGCCAGTAATCAGTCACAAACACAGACACAGCCAACTCCATTCAGGCCCAGCTCCTaGAGAATCCGGCTCAGGTGG	+
Preference number: 4 (lower is better) Translates to: PTQDTASNQSQTQTQPTPFRPSS*RIRLRW Trigger: CCACCTGAGCCGGATTCTGCAGGAGCTGGGCCTGAA...TGGAGTTGGCTGTGTCTGTGTTTGTGACTGATTACTGGCTGTGTCTTGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305885.3 ENST00000535307.1
CDS-3UTR GCA 90 bp	AAGTTCGAGTTTCTGCCCACCCAAGACACAGCCAGTAATCAGTCACAAACACAGTTCAGGCCCAGCTCCTaGAGAATCCGGCTCAGGTGG	+
Preference number: 4 (lower is better) Translates to: KFEFLPTQDTASNQSQTQFRPSS*RIRLRW Trigger: CCACCTGAGCCGGATTCTGCAGGAGCTGGGCCTGAA...CTGTGTTTGTGACTGATTACTGGCTGTGTCTTGGGTGGGCAGAAACTCGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305885.3 ENST00000535307.1
CDS-3UTR GCA 90 bp	AAGACACAGCCAGTAATCAGTCACAAACACAGACACAGCCAACTCCAGGGGCTCGCAAGTTCGAGTTTCTaGCCACCCAAGACACAGCCA	+
Preference number: 4 (lower is better) Translates to: KTQPVISHKHRHSQLQGLASSSF*PPKTQP Trigger: TGGCTGTGTCTTGGGTGGGCAGAAACTCGAACTTGC...GAGCCCCTGGAGTTGGCTGTGTCTGTGTTTGTGACTGATTACTGGCTGTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305885.3 ENST00000535307.1
CDS-3UTR CAA 90 bp	CCCACCCAAGACACAGCCAGTAATCAGTCACAAACACAGACACAGCCAACTCCAAAGGTGGGTCAAGGCTaGAAGAAATCATCCAGGCGG	+
Preference number: 5 (lower is better) Translates to: PTQDTASNQSQTQTQPTPKVGQG*KKSSRR Trigger: CCGCCTGGATGATTTCTTCAAGCCTTGACCCACCTT...TGGAGTTGGCTGTGTCTGTGTTTGTGACTGATTACTGGCTGTGTCTTGGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535307.1
CDS CCA 72 bp	CCAAGCGGACCCCGTCGCTCCCGGAGGCGCTTCCCATaGGGTCTCACCTGGCCTTTGGGACACGCGGCCTCG	+
Preference number: 6 (lower is better) Translates to: PSGPRRSRRRFP*GLTWPLGHAAS Trigger: CGAGGCCGCGTGTCCCAAAGGCCAGGTGAGACCCCATGGGAAGCGCCTCCGGGAGCGACGGGGTCCGCTTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535723.1
CDS CCA 72 bp	CTTACGCGACTGGCCCAAGGCTCACAGGGGGAAAAGTaGCGGGACCTCTTGACTGCGAATCCCGCGCACTCC	+
Preference number: 6 (lower is better) Translates to: LTRLAQGSQGEK*RDLLTANPAHS Trigger: GGAGTGCGCGGGATTCGCAGTCAAGAGGTCCCGCCACTTTTCCCCCTGTGAGCCTTGGGCCAGTCGCGTAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000535723.1
CDS CCA 72 bp	ACAATGGAGGAAAGAGAGGCTCGGAGCTTACGCGACTaGCCCAAGGCTCACAGGGGGAAAAGTGGCGGGACC	+
Preference number: 6 (lower is better) Translates to: TMEEREARSLRD*PKAHRGKSGGT Trigger: GGTCCCGCCACTTTTCCCCCTGTGAGCCTTGGGCCAGTCGCGTAAGCTCCGAGCCTCTCTTTCCTCCATTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000535723.1
CDS CCA 72 bp	ATGGCAACACAGAGGAGGGATGACGCTTTTCTACAATaGAGGAAAGAGAGGCTCGGAGCTTACGCGACTGGC	+
Preference number: 6 (lower is better) Translates to: MATQRRDDAFLQ*RKERLGAYATG Trigger: GCCAGTCGCGTAAGCTCCGAGCCTCTCTTTCCTCCATTGTAGAAAAGCGTCATCCCTCCTCTGTGTTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535723.1