Pregenerated sensors for FDCSP (Homo sapiens)
Ensembl gene IDs: ENSG00000181617Ensembl transcript IDs: ENST00000317987.6
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACTTTTCCTCTCGTTCCTGGTCTTaGGAGACTGGGAAACCAACA | + |
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Preference number: 4 (lower is better) Translates to: QGSGSISISGDQVYRDFSSRSWS*ETGKPT Trigger: TGTTGGTTTCCCAGTCTCTCAAGACCAGGAACGAGA...GGAAAAGTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR GCA 90 bp | CAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACTTTTCCGAAACCAACAGCCACTaGCAAGATGGCTGTGATCAG | + |
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Preference number: 4 (lower is better) Translates to: QGSGSISISGDQVYRDFSETNSH*QDGCDQ Trigger: CTGATCACAGCCATCTTGGCAGTGGCTGTTGGTTTC...GGAAAAGTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR CCA 90 bp | ATTCTTCAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACCTGGTCTTGAGAGACTaGGAAACCAACAGCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: ILQGSGSISISGDQVYRDLVLRD*ETNSHC Trigger: GCAGTGGCTGTTGGTTTCCCAGTCTCTCAAGACCAG...GTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTGAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR TCA 90 bp | ATTCTTCAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACCTGCCAAGATGGCTGTaGTCAGGAGGAGAACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ILQGSGSISISGDQVYRDLPRWL*SGGELS Trigger: AGAAAGTTCTCCTCCTGATCACAGCCATCTTGGCAG...GTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTGAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR CCA 90 bp | ATTCTTCAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACTGGAAGTGGGCGAAATaGATATGGGTAAGGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: ILQGSGSISISGDQVYRDWKWAK*IWVREH Trigger: GTGTTCCCTTACCCATATCCATTTCGCCCACTTCCA...GTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTGAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACTTTTCCTGGAATTGGTGGAAGTaGGCGAAATGGATATGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGSGSISISGDQVYRDFSWNWWK*AKWIWV Trigger: TACCCATATCCATTTCGCCCACTTCCACCAATTCCA...GGAAAAGTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACTTTTCCTCTTGGAAATGGAATTaGTGGAAGTGGGCGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: QGSGSISISGDQVYRDFSSWKWN*WKWAKW Trigger: CCATTTCGCCCACTTCCACCAATTCCATTTCCAAGA...GGAAAAGTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR TCA 90 bp | CAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACTTTTCCTCAGTTCTTTCTCTCTaGCGCTGTTATGAGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: QGSGSISISGDQVYRDFSSVLSL*RCYEKW Trigger: CCATTTCTCATAACAGCGTCAGAGAGAAAGAACTGA...GGAAAAGTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR CCA 90 bp | ATTCTTCAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACTGGAAATGGAATTGGTaGAAGTGGGCGAAATGGATA | + |
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Preference number: 4 (lower is better) Translates to: ILQGSGSISISGDQVYRDWKWNW*KWAKWI Trigger: TATCCATTTCGCCCACTTCCACCAATTCCATTTCCA...GTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTGAAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR CAA 90 bp | ATTCTTCAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACTTCTCGTTCCTGGTCTaGAGAGACTGGGAAACCAAC | + |
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Preference number: 5 (lower is better) Translates to: ILQGSGSISISGDQVYRDFSFLV*RDWETN Trigger: GTTGGTTTCCCAGTCTCTCAAGACCAGGAACGAGAA...GTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTGAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS-3UTR CAA 90 bp | ATTCTTCAAGGAAGTGGCTCAATTTCAATTTCAGGTGACCAGGTTTATCGTGACATCTTGGAAATGGAATaGGTGGAAGTGGGCGAAATG | + |
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Preference number: 5 (lower is better) Translates to: ILQGSGSISISGDQVYRDILEME*VEVGEM Trigger: CATTTCGCCCACTTCCACCAATTCCATTTCCAAGAT...GTCACGATAAACCTGGTCACCTGAAATTGAAATTGAGCCACTTCCTTGAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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| CDS GCA 72 bp | TTCCTGGTCTTGAGAGACTGGGAAACCAACAGCCACTaGCAAGATGGCTGTGATCAGGAGGAGAACTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FLVLRDWETNSH*QDGCDQEENFL Trigger: AAGAAAGTTCTCCTCCTGATCACAGCCATCTTGGCAGTGGCTGTTGGTTTCCCAGTCTCTCAAGACCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317987.6 |
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