RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCSK (Homo sapiens)

Ensembl gene IDs: ENSG00000157353

Ensembl transcript IDs: ENST00000288078.11, ENST00000378912.6, ENST00000464499.5, ENST00000485034.1, ENST00000498702.1, ENST00000571487.5, ENST00000571514.5, ENST00000572784.5, ENST00000573352.5, ENST00000573832.1, ENST00000574784.5, ENST00000576107.5, ENST00000576453.1

Found 747 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTACCTCCACCTTCAGTGGCAGCTGAGCCCGGGAGCGCCCCACCTTaGTGCCAGGCATTAGGCCACCTACTTGGTCCTGCCAGCCACCTC +
Preference number: 1 (lower is better)
Translates to: LPPPSVAAEPGSAPP*CQALGHLLGPASHL
Trigger: GAGGTGGCTGGCAGGACCAAGTAGGTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR TCA 90 bp CCCTCAGGCACCGTGACCTCTTCTACCTCCACCTTCAGTGGCAGCTaGGCCCGGGAGCGCCCCACCTTGATGCCAGGCATTAGGCCACCT +
Preference number: 1 (lower is better)
Translates to: PSGTVTSSTSTFSGS*ARERPTLMPGIRPP
Trigger: AGGTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CCA 90 bp TCTTGGCCAGCACCGCCTCCAAGGCCTCCTTTTGCTGTGGCTCCTTaGTCAACAGATAGAGAAAGCCTCCACCGCCTGCCCCAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: SWPAPPPRPPFAVAP*STDRESLHRLPQPG
Trigger: GCCTGGCTGGGGCAGGCGGTGGAGGCTTTCTCTATCTGTTGACCAAGGAGCCACAGCAAAAGGAGGCCTTGGAGGCGGTGCTGGCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CCA 90 bp GGCCAGGACATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTaGAGCCATGAGCTTCTTCTGCTCCCAGTACGAGGTCAGGCACTG +
Preference number: 1 (lower is better)
Translates to: GQDIHHTPHSQGLTA*SHELLLLPVRGQAL
Trigger: CAGTGCCTGACCTCGTACTGGGAGCAGAAGAAGCTCATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGATGTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR GCA 90 bp GCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTaGCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGC +
Preference number: 1 (lower is better)
Translates to: APVHQVTVLSQALSA*PDLALVSFLWEQIR
Trigger: GCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR GCA 90 bp AGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCATTCTGCACCACAGCAGGAAGTCGG +
Preference number: 1 (lower is better)
Translates to: RGRLPWRKPSAHSSV*RTRLWAFCTTAGSR
Trigger: CCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CCA 90 bp TGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGTACCAGGCTGTaGGCATTCTGCACCACAGCAGGAAGTCGGGCATACCAGCTCCTC +
Preference number: 1 (lower is better)
Translates to: WRKPSAHSSVCRTRL*AFCTTAGSRAYQLL
Trigger: GAGGAGCTGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR GCA 90 bp CCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTaGTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGTG +
Preference number: 1 (lower is better)
Translates to: PGHSPVPGTLCLPRS*SGQLPLGADSQRWV
Trigger: CACCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR GCA 90 bp CTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTaGTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAT +
Preference number: 1 (lower is better)
Translates to: LGPCPPGHSPVPGTL*LPRSCSGQLPLGAD
Trigger: ATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTaGGAGCAGATTCGCAGAGGTGGGTGGGGAGTAGGAGGTGGAGGT +
Preference number: 1 (lower is better)
Translates to: QALSACPDLALVSFL*EQIRRGGWGVGGGG
Trigger: ACCTCCACCTCCTACTCCCCACCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 90 bp TCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTaGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGTGGGGAG +
Preference number: 1 (lower is better)
Translates to: SQSCPRHSLLAQILL*SASFGSRFAEVGGE
Trigger: CTCCCCACCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 90 bp AGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTaGGTGGGGAGTAGGAGGTGGAGGTTCCCATGGGGCAAGGAAGGT +
Preference number: 1 (lower is better)
Translates to: RSCSGQLPLGADSQR*VGSRRWRFPWGKEG
Trigger: ACCTTCCTTGCCCCATGGGAACCTCCACCTCCTACTCCCCACCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTaGTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCA +
Preference number: 1 (lower is better)
Translates to: VLLVKAWDGSESLGH*YQLGKGPPPSLPRS
Trigger: TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 90 bp CGGGTCTTGCCAGTGTACACCAAGAGCAGGTGGTCATTGAGCTTCTaGACAAAGCCCTCAGGCACCGTGACCTCTTCTACCTCCACCTTC +
Preference number: 1 (lower is better)
Translates to: RVLPVYTKSRWSLSF*TKPSGTVTSSTSTF
Trigger: GAAGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTACACTGGCAAGACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CCA 90 bp GCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTaGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAG +
Preference number: 1 (lower is better)
Translates to: APGHLARSVVLLVKA*DGSESLGHCYQLGK
Trigger: CTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 90 bp CCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTaGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAG +
Preference number: 1 (lower is better)
Translates to: PCGMRRPAIGFVKAT*DTKLGTFLCPGGTE
Trigger: CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 90 bp CCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTaGGGAGCAGATTCGCAGAGGTGGGTGGGGAGTAGGAGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: PGTLCLPRSCSGQLP*GADSQRWVGSRRWR
Trigger: CCTCCACCTCCTACTCCCCACCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 90 bp GGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTaGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCG +
Preference number: 2 (lower is better)
Translates to: GPCPPGHSPVPGTLC*PRSCSGQLPLGADS
Trigger: CGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 90 bp CAGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGCATTCTGCACCACAGCAGGAAGTCG +
Preference number: 2 (lower is better)
Translates to: QRQASLAEAFSTLLS*PYQAVGILHHSRKS
Trigger: CGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR-3UTR TCA 90 bp TACACCAAGAGCAGGTGGTCATTGAGCTTCTGGACAAAGCCCTCAGGCACCGTGGGGAGCGCCCCACCTTaGTGCCAGGCATTAGGCCAC +
Preference number: 2 (lower is better)
Translates to: YTKSRWSLSFWTKPSGTVGSAPP*CQALGH
Trigger: GTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCC...CACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR-3UTR GCA 90 bp AGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGTACCAGCCACCTACTTGGTCCTaGCAGCCACCTCCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: RQASLAEAFSTLLSLPYQPPTWS*QPPPGS
Trigger: GGAACCAGGAGGTGGCTGGCAGGACCAAGTAGGTGG...CTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCAGGTGGAGGTTCCCATaGGGCAAGGAAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVRWRFP*GKEGGG
Trigger: TCCCCCACCTTCCTTGCCCCATGGGAACCTCCACCT...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 90 bp CGAGCCAGGCGGGTCTTGCCAGTGTACACCAAGAGCAGGTGGTCATaGAGCTTCTGGACAAAGCCCTCAGGCACCGTGACCTCTTCTACC +
Preference number: 2 (lower is better)
Translates to: RARRVLPVYTKSRWS*SFWTKPSGTVTSST
Trigger: GGTAGAAGAGGTCACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CAA 90 bp CAGCTCCTCAGCACATCCTGCAGCAGGTTCCGAGCCAGGCGGGTCTaGCCAGTGTACACCAAGAGCAGGTGGTCATTGAGCTTCTGGACA +
Preference number: 2 (lower is better)
Translates to: QLLSTSCSRFRARRV*PVYTKSRWSLSFWT
Trigger: TGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCGGAACCTGCTGCAGGATGTGCTGAGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR-3UTR CCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCAGCAGATTCGCAGAGGTaGGTGGGGAGTAGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPADSQR*VGSRRW
Trigger: CCACCTCCTACTCCCCACCCACCTCTGCGAATCTGC...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 90 bp ACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTaGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: TRSQSCPRHSLLAQI*LWSASFGSRFAEVG
Trigger: ACCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 90 bp TTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTaGGCAAGGGACCGCCACCCTCACTCCCACGCTCACATGAGGGTT +
Preference number: 2 (lower is better)
Translates to: LRPGMAVNHWVTATN*ARDRHPHSHAHMRV
Trigger: AACCCTCATGTGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 90 bp ACCCACTTCCCACAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTaGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGC +
Preference number: 2 (lower is better)
Translates to: THFPQAPGHLARSVV*LVKAWDGSESLGHC
Trigger: GCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTGTGGGAAGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR GCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCAGGCACTCTCTGCTTaGCCAGATCTTGCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLQALSA*PDLALV
Trigger: GACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCAGATTCGCAGAGGTaGGTGGGGAGTAGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KATWDTKLGTFLCPGGTEADSQR*VGSRRW
Trigger: CCACCTCCTACTCCCCACCCACCTCTGCGAATCTGC...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 90 bp AGAATGCCAGTCCTGAGAACCCACTTCCCACAGGCACCAGGTCACTaGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGT +
Preference number: 2 (lower is better)
Translates to: RMPVLRTHFPQAPGH*ARSVVLLVKAWDGS
Trigger: ACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTGTGGGAAGTGGGTTCTCAGGACTGGCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR TCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACACTCCCACGCTCACATaGGGGTTGAGTGTAAGTCTA +
Preference number: 2 (lower is better)
Translates to: GMAVNHWVTATNLARDRHTPTLT*GLSVSL
Trigger: TAGACTTACACTCAACCCTCATGTGAGCGTGGGAGT...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTAGGTGGAGGTTCCCATaGGGCAAGGAAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: STTLSHRECLKGPLQGWPRWRFP*GKEGGG
Trigger: TCCCCCACCTTCCTTGCCCCATGGGAACCTCCACCT...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR GCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCTGCTTGCCCAGATCTTaGTCTGGTCAGCTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLCLPRS*SGQLPL
Trigger: CAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCA...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR GCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAGTCCCAGGCACTCTCTaGTTGCCCAGATCTTGCTCT +
Preference number: 2 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLVPGTL*LPRSCS
Trigger: AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGAC...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAGCCCAGATCTTGCTCTaGTCAGCTTCCTTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEAQILL*SASFGS
Trigger: GCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGC...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTGCCCAGATCTTGCTCTaGTCAGCTTCCTTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGAQILL*SASFGS
Trigger: GCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGC...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAGCCATATGCCAAGGCTaGCTGTCAACCCTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEAICQG*LSTLSR
Trigger: CCTGGAAAGGGTTGACAGCCAGCCTTGGCATATGGC...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGAATCACTGGGTCACTaGTACCAACTTGGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDESLGH*YQLGKG
Trigger: TCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTC...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATTTCCAGGGCCCTTGTaGAATGAGAAGGCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEFPGPL*NEKASH
Trigger: ATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAA...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR GCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTATGCTTGCCCAGATCTTaGTCTGGTCAGCTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLCLPRS*SGQLPL
Trigger: CAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCA...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR GCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGCAGGCACTCTCTGCTTaGCCAGATCTTGCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKQALSA*PDLALV
Trigger: GACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAAAGGTGGAGGTTCCCATaGGGCAAGGAAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: HMRVECKSTTLSHRECLKRWRFP*GKEGGG
Trigger: TCCCCCACCTTCCTTGCCCCATGGGAACCTCCACCT...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTACTGGTCAGCTTCCTTTaGGAGCAGATTCGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLLVSFL*EQIRRG
Trigger: ACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAG...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTATTTGTAAAGGCCACGTaGGATACTAAGCTTGGGACC +
Preference number: 2 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLFVKAT*DTKLGT
Trigger: GGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAA...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTGGTCAGCTTCCTTTaGGAGCAGATTCGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: HAHMRVECKSTTLSHRECLVSFL*EQIRRG
Trigger: ACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAG...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 72 bp CCACCGCCTGCCCCAGCCAGGCTCTGGCCATGCACGTaGGGGGCCAGGACATCCATCATACGCCGCACAGTC +
Preference number: 3 (lower is better)
Translates to: PPPAPARLWPCT*GARTSIIRRTV
Trigger: GACTGTGCGGCGTATGATGGATGTCCTGGCCCCCCACGTGCATGGCCAGAGCCTGGCTGGGGCAGGCGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CCA 72 bp CTCAGGCACCGTGACCTCTTCTACCTCCACCTTCAGTaGCAGCTGAGCCCGGGAGCGCCCCACCTTGATGCC +
Preference number: 3 (lower is better)
Translates to: LRHRDLFYLHLQ*QLSPGAPHLDA
Trigger: GGCATCAAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAGAAGAGGTCACGGTGCCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR TCA 72 bp ACCGTGACCTCTTCTACCTCCACCTTCAGTGGCAGCTaGGCCCGGGAGCGCCCCACCTTGATGCCAGGCATT +
Preference number: 3 (lower is better)
Translates to: TVTSSTSTFSGS*ARERPTLMPGI
Trigger: AATGCCTGGCATCAAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAGAAGAGGTCACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR-3UTR CAA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCATCTTCAGGGTTGGCCTaGCTAAGGGACTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSSSGLA*LRDSQP
Trigger: TGGCTGGGAGTCCCTTAGCAAGGCCAACCCTGAAGA...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp GAGCTTCTGGACAAAGCCCTCAGGCACCGTGACCTCTTCTACCTCCACCTTCAGCGGGAGCGCCCCACCTaGATGCCAGGCATTAGGCCA +
Preference number: 3 (lower is better)
Translates to: ELLDKALRHRDLFYLHLQRERPT*MPGIRP
Trigger: TGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCG...CTGAAGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGGCTTTGTCCAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR-3UTR CAA 90 bp CTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGTACCAGGCTGTGGCGAGCCAGGCGGGTCTaGCCAGTGTACACCAAGAGC +
Preference number: 3 (lower is better)
Translates to: LPWRKPSAHSSVCRTRLWRARRV*PVYTKS
Trigger: GCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCG...CCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR-3UTR CAA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCATCTGGTCAGCTTCCTTaGGGAGCAGATTCGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSSGQLP*GADSQR
Trigger: CCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGA...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCTGCTTGCCCAGATCTaGCTCTGGTCAGCTTCCTTT +
Preference number: 3 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRLLAQI*LWSASF
Trigger: AAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCTCTTCAGGGTTGGCCTaGCTAAGGGACTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLSSGLA*LRDSQP
Trigger: TGGCTGGGAGTCCCTTAGCAAGGCCAACCCTGAAGA...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGTCACTGCTACCAACTaGGCAAGGGACCGCCACCCT +
Preference number: 3 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDVTATN*ARDRHP
Trigger: AGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGAC...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR GCA 72 bp CACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTaGCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAG +
Preference number: 3 (lower is better)
Translates to: HQVTVLSQALSA*PDLALVSFLWE
Trigger: CTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR GCA 72 bp GTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTaGTACCAACTTGGCAAGGGACCGCCACCCTCACTC +
Preference number: 3 (lower is better)
Translates to: VKAWDGSESLGH*YQLGKGPPPSL
Trigger: GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR GCA 72 bp CTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCATTCTGCACCACAGCA +
Preference number: 3 (lower is better)
Translates to: LPWRKPSAHSSV*RTRLWAFCTTA
Trigger: TGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CCA 72 bp ATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTaGAGCCATGAGCTTCTTCTGCTCCCAGTACGAGGT +
Preference number: 3 (lower is better)
Translates to: IHHTPHSQGLTA*SHELLLLPVRG
Trigger: ACCTCGTACTGGGAGCAGAAGAAGCTCATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CCA 72 bp CTTGGCCAGCACCGCCTCCAAGGCCTCCTTTTGCTGTaGCTCCTTGGTCAACAGATAGAGAAAGCCTCCACC +
Preference number: 3 (lower is better)
Translates to: LGQHRLQGLLLL*LLGQQIEKAST
Trigger: GGTGGAGGCTTTCTCTATCTGTTGACCAAGGAGCCACAGCAAAAGGAGGCCTTGGAGGCGGTGCTGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR-3UTR CAA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCATCTGGTCAGCTTCCTTaGGGAGCAGATTCGCAGAGG +
Preference number: 3 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPSGQLP*GADSQR
Trigger: CCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGA...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR GCA 72 bp AGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTaGTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAG +
Preference number: 3 (lower is better)
Translates to: SPVPGTLCLPRS*SGQLPLGADSQ
Trigger: CTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR GCA 72 bp TGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTaGTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTG +
Preference number: 3 (lower is better)
Translates to: CPPGHSPVPGTL*LPRSCSGQLPL
Trigger: CAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 72 bp TGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTaGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: CPRHSLLAQILL*SASFGSRFAEV
Trigger: CACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCGTGGGATACTAAGCTaGGGACCTTCCTATGTCCAG +
Preference number: 3 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLRGILS*GPSYVQ
Trigger: CTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGCTGCTTGCCCAGATCTaGCTCTGGTCAGCTTCCTTT +
Preference number: 3 (lower is better)
Translates to: KATWDTKLGTFLCPGGTELLAQI*LWSASF
Trigger: AAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAG...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTACCAGGCACTCTCTGCTaGCCCAGATCTTGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLPGTLC*PRSCSG
Trigger: ACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGG...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCCCTTTCCAGGGCCCTaGTGGAATGAGAAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: HAHMRVECKSTTLSHRECPFPGP*WNEKAS
Trigger: GCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGG...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 72 bp CACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTaGGATGGCAGTGAATCACTGGGTCACTGCTACCAA +
Preference number: 3 (lower is better)
Translates to: HLARSVVLLVKA*DGSESLGHCYQ
Trigger: TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGCGTGGGATACTAAGCTaGGGACCTTCCTATGTCCAG +
Preference number: 3 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRRGILS*GPSYVQ
Trigger: CTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACG...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR-3UTR CAA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACGTGGGATACTAAGCTaGGGACCTTCCTATGTCCAG +
Preference number: 3 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQRGILS*GPSYVQ
Trigger: CTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACG...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR TCA 72 bp AAGGACAGAGTGAATTTATTCCAAGAATGCCAGTCCTaGGAACCCACTTCCCACAGGCACCAGGTCACTTGG +
Preference number: 3 (lower is better)
Translates to: KDRVNLFQECQS*EPTSHRHQVTW
Trigger: CCAAGTGACCTGGTGCCTGTGGGAAGTGGGTTCTCAGGACTGGCATTCTTGGAATAAATTCACTCTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CCA 72 bp ATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTaGGATACTAAGCTTGGGACCTTCCTATGTCCAGGA +
Preference number: 3 (lower is better)
Translates to: MRRPAIGFVKAT*DTKLGTFLCPG
Trigger: TCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CGGGAGCGCCCCACCTTGATGCCAGGCATTAGGCCACCTACTTGGTCCTGCCAGGCCCACCACCCGGCCTaGGGCTCGCTGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RERPTLMPGIRPPTWSCQAHHPA*GSLQGS
Trigger: GCTGCCTTGCAGCGAGCCGCAGGCCGGGTGGTGGGC...CTGGCAGGACCAAGTAGGTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACAACCTGGTCCAGCGTaGCCAGCAGGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSQPGPA*PAGARG
Trigger: GCCCCGGGCCCCTGCTGGCCACGCTGGACCAGGTTG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACGGGCCTCCAGCACGTaGCGCGCCTTATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSRASST*RALCRA
Trigger: GGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCCGGGAGCGCCCCACCTTGATGCCAGGCATTAGGCCACCTACTTGGTCCTGCTGCCTGCCAGGATGCTaGTGGTGCCCAGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ARERPTLMPGIRPPTWSCCLPGC*WCPGQS
Trigger: GCTCTGGCCTGGGCACCAGCAGCATCCTGGCAGGCA...GCAGGACCAAGTAGGTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR TCA 90 bp TGGCTCCTTGGTCAACAGATAGAGAAAGCCTCCACCGCCTGCCCCAGCCAGGCTACCTTCAGTGGCAGCTaGGCCCGGGAGCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: WLLGQQIEKASTACPSQATFSGS*ARERPT
Trigger: GGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGT...AGCCTGGCTGGGGCAGGCGGTGGAGGCTTTCTCTATCTGTTGACCAAGGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGGCCGCCAGAAGCTGCTaGTCCTCCACCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQAARSC*SSTWEC
Trigger: GCACTCCCAGGTGGAGGAGCAGCAGCTTCTGGCGGC...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGTCAGCCACCACCCACTaGCCAGGTCCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQSATTH*PGPGSS
Trigger: GGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTGA...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCTCCGGGATGCGGCGTaGCCTGGCTCCGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHLRDAA*PGSDGP
Trigger: CGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAG...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCCGGGAGCGCCCCACCTTGATGCCAGGCATTAGGCCACCTACTTGGTCCTGCACAGTCATCTCATCCTaGCGAGGCCCCACCGCCAGC +
Preference number: 4 (lower is better)
Translates to: ARERPTLMPGIRPPTWSCTVISS*RGPTAS
Trigger: GCTGGCGGTGGGGCCTCGGCAGGATGAGATGACTGT...GCAGGACCAAGTAGGTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp TGGCTCCTTGGTCAACAGATAGAGAAAGCCTCCACCGCCTGCCCCAGCCAGGCTGGATCAGGGCTTCCGTaGCCACCACCCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: WLLGQQIEKASTACPSQAGSGLP*PPPGLR
Trigger: CCGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCC...AGCCTGGCTGGGGCAGGCGGTGGAGGCTTTCTCTATCTGTTGACCAAGGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACGTGCCCTGGCTCCGATaGGCCGGCGGCCGTCCACTC +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHVPWLR*AGGRPL
Trigger: GAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCAC...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGTACCAGGCTGTGGGTGCCCTGGCTCCGATaGGCCGGCGGCCGTCCACTC +
Preference number: 4 (lower is better)
Translates to: LPWRKPSAHSSVCRTRLWVPWLR*AGGRPL
Trigger: GAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCAC...CCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp TTCTACCTCCACCTTCAGTGGCAGCTGAGCCCGGGAGCGCCCCACCTTGATGCCCTGCCAGGATGCTGCTaGTGCCCAGGCCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: FYLHLQWQLSPGAPHLDALPGCC*CPGQSR
Trigger: ACGGCTCTGGCCTGGGCACCAGCAGCATCCTGGCAG...GGCATCAAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR TCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCATCAGCGGGCGCAGGCTaGGGTCCTGCCGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPSAGAG*GPAGPP
Trigger: TGGAGGCCCGGCAGGACCTCAGCCTGCGCCCGCTGA...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAGGGAGCGCCCCACCTTaGTGCCAGGCATTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSGSAPP*CQALGH
Trigger: GTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCC...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCACCTTCAGTGGCAGCTaGGCCCGGGAGCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVTFSGS*ARERPT
Trigger: GGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGT...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCGGGCCTCCAGCACGTaGCGCGCCTTATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLARASST*RALCRA
Trigger: GGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCG...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTCGCCACACAGGCCAGTaGCCGTGCCGCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSRHTGQ*PCRHTR
Trigger: CCTGGTGTGGCGGCACGGGCACTGGCCTGTGTGGCG...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCGCCTCCACGCCCGCTaGCAGGTCTCCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRRLHAR*QVSTLQ
Trigger: CTGGAGTGTGGAGACCTGGCAGCGGGCGTGGAGGCG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCAGGACATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTGGAGCCATGTCAGCCACCACCCACTaGCCAGGTCCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ARTSIIRRTVRGSQPGAMSATTH*PGPGSS
Trigger: GGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTGA...CATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGATGTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp CACCAAGAGCAGGTGGTCATTGAGCTTCTGGACAAAGCCCTCAGGCACCGTGACCTCCGGGATGCGGCGTaGCCTGGCTCCGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: HQEQVVIELLDKALRHRDLRDAA*PGSDGP
Trigger: CGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAG...GTCACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGGCCCACCACCCGGCCTaGGGCTCGCTGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGAHHPA*GSLQGS
Trigger: GCTGCCTTGCAGCGAGCCGCAGGCCGGGTGGTGGGC...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACGGATCAGGGCTTCCGTaGCCACCACCCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHGSGLP*PPPGLR
Trigger: CCGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCC...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACAAGCAGCCAGCGCCTaGAGGTGGCAGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSQAASA*RWQCCR
Trigger: CCTGCAGCACTGCCACCTGCAGGCGCTGGCTGCTTG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS-3UTR CCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACGCGGGCTCACGTGGGTaGCTAGGAGGCGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHAGSRG*LGGARQ
Trigger: CTGCCGAGCGCCTCCTAGCCACCCACGTGAGCCCGC...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCAGGGGCGGGCTCACGTaGGTGGCTAGGAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSRGGLT*VARRRS
Trigger: CGAGCGCCTCCTAGCCACCCACGTGAGCCCGCCCCT...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTAGGGGCGGGCTCACGTaGGTGGCTAGGAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSRGGLT*VARRRS
Trigger: CGAGCGCCTCCTAGCCACCCACGTGAGCCCGCCCCT...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTGGCGAGAGGCCAGCGTaGCAGCCCGATCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLAGERPA*QPDPGT
Trigger: CGTGCCTGGATCGGGCTGCCACGCTGGCCTCTCGCC...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCCTCAGGGTTGGCAGCTaGCCCGCTCCGCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSLRVGS*PAPQAP
Trigger: GGGGGCTTGCGGAGCGGGCCAGCTGCCAACCCTGAG...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACTGCCAGGATGCTGCTaGTGCCCAGGCCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSLPGCC*CPGQSR
Trigger: ACGGCTCTGGCCTGGGCACCAGCAGCATCCTGGCAG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR CCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGAGGTGCAGCACTGCGTaGATCAGGGCTTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQRCSTA*IRASVP
Trigger: GGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCT...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACCACGGGGAGGCAGGTaGAAGCCCTGCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSPRGGR*KPCHSH
Trigger: ATGACTGTGGCAGGGCTTTCACCTGCCTCCCCGTGG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGACGGCCAACGAGGGTaGAGGCGTGGCCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWDGQRG*RRGPGS
Trigger: GCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTC...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATCAGCGGGCGCAGGCTaGGGTCCTGCCGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRSAGAG*GPAGPP
Trigger: TGGAGGCCCGGCAGGACCTCAGCCTGCGCCCGCTGA...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GCCAGGACATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTGGAGCCATGCGATCCCTGCACAGATaGAGGCCGCCTTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARTSIIRRTVRGSQPGAMRSLHR*RPPSAG
Trigger: CCCTGCTGAAGGCGGCCTTCATCTGTGCAGGGATCG...CATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGATGTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR TCA 90 bp CCCAGCAGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCGGGAGCGCCCCACCTTaGTGCCAGGCATTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSRGRLPWRKPSAHSSVCGSAPP*CQALGH
Trigger: GTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCC...GCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR TCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAGAAAGGGCAACAGGTTaGGGCCTCGGTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSERATG*GLGPQQ
Trigger: CTGCTGGGGACCGAGGCCTCAACCTGTTGCCCTTTC...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGACATCTGCATCGCCTTaGCCCAACTCTGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQTSASP*PNSGGL
Trigger: GAGGCCCCCAGAGTTGGGGCAAGGCGATGCAGATGT...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTCGCAGCTCCCGGCCATaGAGGGCCTTGGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSRSSRP*RALEWA
Trigger: AGCCCACTCCAAGGCCCTGCATGGCCGGGAGCTGCG...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGACTCCGGGATGCGGCGTaGCCTGGCTCCGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRLRDAA*PGSDGP
Trigger: CGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAG...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGGCTCAGGCTCCGGGATaGGGCGTGCCCTGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGAQAPG*GVPWLR
Trigger: TCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGC...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACCAAGAGCAGGTGGTCATTGAGCTTCTGGACAAAGCCCTCAGGCACCGTGACGCTCAGGCTCCGGGATaGGGCGTGCCCTGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: HQEQVVIELLDKALRHRDAQAPG*GVPWLR
Trigger: TCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGC...GTCACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp GCCAGGACATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTGGAGCCATGAGCTCAGACCAGGTGTaGAGCTCAAAGCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: ARTSIIRRTVRGSQPGAMSSDQV*SSKPPP
Trigger: CGGGGGCGGCTTTGAGCTGCACACCTGGTCTGAGCT...CATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGATGTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp CCCAGCAGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCAGTGCCTGCCAGGATaGTGCTGGTGCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSRGRLPWRKPSAHSSVCQCLPG*CWCPGQ
Trigger: CTGGCCTGGGCACCAGCAGCATCCTGGCAGGCACTG...GCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCAGTGCCTGCCAGGATaGTGCTGGTGCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRQCLPG*CWCPGQ
Trigger: CTGGCCTGGGCACCAGCAGCATCCTGGCAGGCACTG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCAGGATCAGGGCTTCCGTaGCCACCACCCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPGSGLP*PPPGLR
Trigger: CCGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCC...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCGCGGGCTCACGTGGGTaGCTAGGAGGCGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLAGSRG*LGGARQ
Trigger: CTGCCGAGCGCCTCCTAGCCACCCACGTGAGCCCGC...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCAGCTCCCTCCACAGCTaGGCCCGGGCGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVSSLHS*ARALCR
Trigger: TCTGCAGAGCGCCCGGGCCCAGCTGTGGAGGGAGCT...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCTGGGAGTGCACAATCTaGGCCCCAGGAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVWECTI*APGAPG
Trigger: CCCCGGGGCTCCTGGGGCCCAGATTGTGCACTCCCA...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCTCCCAGGACCCAGCTaGACAGGGCCCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVLPGPS*TGPSSR
Trigger: CCTGCTGGAGGGCCCTGTCCAGCTGGGTCCTGGGAG...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTACGAGGGTGAAGGCGTaGCCCGGGGAGCCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSTRVKA*PGEPCS
Trigger: GCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGT...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGCCCCAGCTGCAACCTaGTCCAGCGTGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSAPAAT*SSVASR
Trigger: CCTGCTGGCCACGCTGGACCAGGTTGCAGCTGGGGC...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGCTCAGGGTTGGCAGCTaGCCCGCTCCGCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGLRVGS*PAPQAP
Trigger: GGGGGCTTGCGGAGCGGGCCAGCTGCCAACCCTGAG...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGAGTGCCCTGGCTCCGATaGGCCGGCGGCCGTCCACTC +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGVPWLR*AGGRPL
Trigger: GAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCAC...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CTGGACAAAGCCCTCAGGCACCGTGACCTCTTCTACCTCCACCTTCAGTGGCAGCCCAGGCCAGAGCCGTaGGGCAGCTCAGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: LDKALRHRDLFYLHLQWQPRPEP*GSSDQV
Trigger: CACCTGGTCTGAGCTGCCCCACGGCTCTGGCCTGGG...CTGCCACTGAAGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGGCTTTGTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGGCAGATTCGCAGAGGTaGGTGGGGAGTAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQADSQR*VGSRRW
Trigger: CCACCTCCTACTCCCCACCCACCTCTGCGAATCTGC...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCTCTCCTGCCCCAGCCTaGTCCAGCGTGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVSPAPA*SSVASR
Trigger: CCTGCTGGCCACGCTGGACCAGGCTGGGGCAGGAGA...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS-3UTR TCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCAGCCAGCGCCTATGTaGATGGGGCCCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVQPAPM*MGPCRW
Trigger: CCACCTGCAGGGCCCCATTCACATAGGCGCTGGCTG...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTTCAGCGGGCGCAGGCTaGGGTCCTGCCGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGSAGAG*GPAGPP
Trigger: TGGAGGCCCGGCAGGACCTCAGCCTGCGCCCGCTGA...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCGCAGCATGTCGGTGCTaGAGACCCACACGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVAACRC*RPTRLA
Trigger: CGCCAGGCGTGTGGGTCTGCAGCACCGACATGCTGC...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCCAAGCCTAGGTAGGTaGAGGCATCCAGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLAPSLGR*RHPGAG
Trigger: GCCCGCCCCTGGATGCCTGCACCTACCTAGGCTTGG...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACTGCAGGTGGCAGTGCTaGAGGACGCTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHCRWQC*RTLPGP
Trigger: GGGTCCTGGGAGCGTCCTGCAGCACTGCCACCTGCA...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAGGATCAGGGCTTCCGTaGCCACCACCCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRGSGLP*PPPGLR
Trigger: CCGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCC...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TTCTACCTCCACCTTCAGTGGCAGCTGAGCCCGGGAGCGCCCCACCTTGATGCCGAGCCAGGCGGGTCTTaGCAGTGTACACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FYLHLQWQLSPGAPHLDAEPGGS*QCTPRA
Trigger: TGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTC...GGCATCAAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp GCTCCTCAGCACATCCTGCAGCAGGTTCCGAGCCAGGCGGGTCTTGCCAGTGTAACAGTGGTGAGCACCTaGTCCAGGTGCAGCACTGCG +
Preference number: 4 (lower is better)
Translates to: APQHILQQVPSQAGLASVTVVST*SRCSTA
Trigger: CGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGT...TACACTGGCAAGACCCGCCTGGCTCGGAACCTGCTGCAGGATGTGCTGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGTCGGCTGCTCCATTCTaGCCAAGCGGAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRSAAPF*PSGGAS
Trigger: GGAAGCCCCTCCGCTTGGCCAGAATGGAGCAGCCGA...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCGGAGGGCGATCACTCTaGCTCCCCGGAAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVGGRSL*LPGSCP
Trigger: GGGACAGCTTCCGGGGAGCCAGAGTGATCGCCCTCC...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCATGGGAGTGCACAATCTaGGCCCCAGGAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPWECTI*APGAPG
Trigger: CCCCGGGGCTCCTGGGGCCCAGATTGTGCACTCCCA...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACATGGGGCCCTGCAGGTaGCAGTGCTGCAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHMGPCR*QCCRTL
Trigger: GAGCGTCCTGCAGCACTGCCACCTGCAGGGCCCCAT...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCAACGAGGGTGAAGGCGTaGCCCGGGGAGCCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPTRVKA*PGEPCS
Trigger: GCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGT...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGGAAAGAGGCGGGCGCTaGGAAGGCAGTACTCTGCGG +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRERGGR*EGSTLR
Trigger: CCGCAGAGTACTGCCTTCCCAGCGCCCGCCTCTTTC...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCCCCCATCCTCCTGGTaGTCCAGCATCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRPPSSW*SSIHSR
Trigger: CCTGCTGTGGATGCTGGACCACCAGGAGGATGGGGG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTACAACCTGGTCCAGCGTaGCCAGCAGGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLQPGPA*PAGARG
Trigger: GCCCCGGGCCCCTGCTGGCCACGCTGGACCAGGTTG...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATCTCAGGGTTGGCAGCTaGCCCGCTCCGCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDLRVGS*PAPQAP
Trigger: GGGGGCTTGCGGAGCGGGCCAGCTGCCAACCCTGAG...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACGCATCCACTCAGGGTTaGCAGCTGGCCCGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHASTQG*QLARSA
Trigger: TGCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGC...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGCAGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGAGGTGCAGCACTGCGTaGATCAGGGCTTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QQRQASLAEAFSTLLSLPRCSTA*IRASVP
Trigger: GGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCT...CGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGAGAGGCAGGCTTCCTTaGCGGAAGCCTTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQRGRLP*RKPSAH
Trigger: GTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCT...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CGGGAGCGCCCCACCTTGATGCCAGGCATTAGGCCACCTACTTGGTCCTGCCAGAGAGGCAGGCTTCCTTaGCGGAAGCCTTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: RERPTLMPGIRPPTWSCQRGRLP*RKPSAH
Trigger: GTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCT...CTGGCAGGACCAAGTAGGTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCTCTGGCCATGCACGTaGGGGGCCAGGACATCCATC +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRLWPCT*GARTSI
Trigger: GATGGATGTCCTGGCCCCCCACGTGCATGGCCAGAG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCATTCTGCACCACAGCAGGAAGTCGGGCATACCAGCTCCTCAGCACATCCTGCCAAGGCCCTCGGTCTTaGCCAGCACCGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AFCTTAGSRAYQLLSTSCQGPRS*PAPPPR
Trigger: CCTTGGAGGCGGTGCTGGCCAAGACCGAGGGCCTTG...GCAGGATGTGCTGAGGAGCTGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAAGGTGGAGGTTCCCATaGGGCAAGGAAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSRWRFP*GKEGGG
Trigger: TCCCCCACCTTCCTTGCCCCATGGGAACCTCCACCT...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGCTGCTGGTGCTCAGCTaGAGTTCCGAGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQLLVLS*SSEWTC
Trigger: GCATGTCCACTCGGAACTCCAGCTGAGCACCAGCAG...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR TCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCCGCCCATCAGGCCTaGCACACCGCTGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHPAHQA*HTAESL
Trigger: CAGAGATTCAGCGGTGTGTCAGGCCTGATGGGCGGG...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTGACGGCCAACGAGGGTaGAGGCGTGGCCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPDGQRG*RRGPGS
Trigger: GCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTC...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCGGGAGCGCCCCACCTTaGTGCCAGGCATTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLGSAPP*CQALGH
Trigger: GTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCC...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CAGCAGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGAGCCCTCAGGCACCGTaGCCTCTTCTACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QQRQASLAEAFSTLLSLPSPQAP*PLLPPP
Trigger: AGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGGCT...CGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR TCA 90 bp TTGCCGTACCAGGCTGTGGGCATTCTGCACCACAGCAGGAAGTCGGGCATACCAGAAAGGGCAACAGGTTaGGGCCTCGGTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPYQAVGILHHSRKSGIPERATG*GLGPQQ
Trigger: CTGCTGGGGACCGAGGCCTCAACCTGTTGCCCTTTC...TGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGGGGTGGCTCCTCCGCTaGCCACACGCTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQGWLLR*PHASLG
Trigger: ACCCAGAGAAGCGTGTGGGCAGCGGAGGAGCCACCC...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCTGCAGGTGGCAGTGCTaGAGGACGCTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLCRWQC*RTLPGP
Trigger: GGGTCCTGGGAGCGTCCTGCAGCACTGCCACCTGCA...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGACGCAGCTCCCGGCCATaGAGGGCCTTGGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRRSSRP*RALEWA
Trigger: AGCCCACTCCAAGGCCCTGCATGGCCGGGAGCTGCG...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCGCGTGTGGTGTCCCTaGAGGACAAGGTCACGCAGC +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVRVWCP*RTRSRS
Trigger: GCTGCGTGACCTTGTCCTGCAGGGACACCACACGCG...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTGGGAAGGCAGTACTCTaGGGGCAGCGTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLAGKAVL*GQRLRV
Trigger: GACCCTGAGACGCTGCCCGCAGAGTACTGCCTTCCC...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCGGGAAGGCAGTACTCTaGGGGCAGCGTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSGKAVL*GQRLRV
Trigger: GACCCTGAGACGCTGCCCGCAGAGTACTGCCTTCCC...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCACGTGCCGCGCCTTATaGAGGGCCTGGCGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSTCRAL*RAWRKN
Trigger: GTTCTTCCGCCAGGCCCTGCATAAGGCGCGGCACGT...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCCGCAGGCTGAGGTCCTaGCGGGCCTCCAGCACGTGC +
Preference number: 4 (lower is better)
Translates to: HSLLAQILLWSASFGSRFRRLRS*RASSTC
Trigger: GCACGTGCTGGAGGCCCGGCAGGACCTCAGCCTGCG...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCCACACCAGGGTCTCCTaGCCCAGCTGCAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSHTRVS*PSCNLV
Trigger: GACCAGGTTGCAGCTGGGGCAGGAGACCCTGGTGTG...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGACAGGCCAGTGCCCGTaGCGCCACACCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWTGQCP*RHTRVS
Trigger: GGAGACCCTGGTGTGGCGGCACGGGCACTGGCCTGT...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCCGCCACACAGGCCAGTaGCCGTGCCGCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: HSLLAQILLWSASFGSRFRHTGQ*PCRHTR
Trigger: CCTGGTGTGGCGGCACGGGCACTGGCCTGTGTGGCG...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCCCCCACGGCCCTCTaGCATGCAGCCCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: HSLLAQILLWSASFGSRFAPTAL*HAAQDV
Trigger: GACGTCCTGGGCTGCATGGCAGAGGGCCGTGGGGGC...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTGCTCAGGCTCCGGGATaGGGCGTGCCCTGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGAQAPG*GVPWLR
Trigger: TCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGC...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAAAGGTGCGGAGCAGCTaGTCACTCAGCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSKVRSS*SLSWSS
Trigger: GGAACTCCAGCTGAGTGAGCAGCTGCTCCGCACCTT...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR GCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCAGTGCCTGCCAGGATaGTGCTGGTGCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLQCLPG*CWCPGQ
Trigger: CTGGCCTGGGCACCAGCAGCATCCTGGCAGGCACTG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCAGTGGTGAGCACCTaGTCCAGGTGCAGCACTGCG +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHPVVST*SRCSTA
Trigger: CGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGG...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAGAGCCAGGCGGGTCTTaGCAGTGTACACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSEPGGS*QCTPRA
Trigger: TGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTC...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TTCTACCTCCACCTTCAGTGGCAGCTGAGCCCGGGAGCGCCCCACCTTGATGCCGCCATGAGCTTCTTCTaGTCCCAGTACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FYLHLQWQLSPGAPHLDAAMSFF*SQYEVR
Trigger: CCTGACCTCGTACTGGGAGCAGAAGAAGCTCATGGC...GGCATCAAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGTAGGCCGGGCTCCCTaGGAGGGCGATCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWVGRAP*EGDHSG
Trigger: GCCAGAGTGATCGCCCTCCCAGGGAGCCCGGCCTAC...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGGGGCGGGCTCACGTaGGTGGCTAGGAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLRGGLT*VARRRS
Trigger: CGAGCGCCTCCTAGCCACCCACGTGAGCCCGCCCCT...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACCAGGAAGTCCTCCCTaGTCACGTTCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSPGSPP*SRSQPC
Trigger: GCATGGCTGAGAACGTGACCAGGGAGGACTTCCTGG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAAGCTCCCTCCACAGCTaGGCCCGGGCGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRSSLHS*ARALCR
Trigger: TCTGCAGAGCGCCCGGGCCCAGCTGTGGAGGGAGCT...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTCCCCCATCCTCCTGGTaGTCCAGCATCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSPPSSW*SSIHSR
Trigger: CCTGCTGTGGATGCTGGACCACCAGGAGGATGGGGG...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTCGCCCCCATCCTCCTaGTGGTCCAGCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSSPPSS*WSSIHS
Trigger: GCTGTGGATGCTGGACCACCAGGAGGATGGGGGCGA...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTGGCGAGAGGCCAGCGTaGCAGCCCGATCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGGERPA*QPDPGT
Trigger: CGTGCCTGGATCGGGCTGCCACGCTGGCCTCTCGCC...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TTGCCGTACCAGGCTGTGGGCATTCTGCACCACAGCAGGAAGTCGGGCATACCACTCATAGGCAAGGGGTaGCGTGTCACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPYQAVGILHHSRKSGIPLIGKG*RVTPAP
Trigger: GGGGGCTGGAGTGACACGCCACCCCTTGCCTATGAG...TGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTGTGCCCTGGCTCCGATaGGCCGGCGGCCGTCCACTC +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPVPWLR*AGGRPL
Trigger: GAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCAC...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCTTCAGCAGGGCCCCTaGGGCATGAGGCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVLQQGP*GMRLAV
Trigger: TACTGCCAGCCTCATGCCCCAGGGGCCCTGCTGAAG...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGACCCAGGCCAGAGCCGTaGGGCAGCTCAGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRPRPEP*GSSDQV
Trigger: CACCTGGTCTGAGCTGCCCCACGGCTCTGGCCTGGG...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR CCA 90 bp GCATTCTGCACCACAGCAGGAAGTCGGGCATACCAGCTCCTCAGCACATCCTGCTACCTCCACCTTCAGTaGCAGCTGAGCCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: AFCTTAGSRAYQLLSTSCYLHLQ*QLSPGA
Trigger: CGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTA...GCAGGATGTGCTGAGGAGCTGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GCCAGGACATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTGGAGCCATGTGCCGTACCAGGCTGTaGGCATTCTGCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: ARTSIIRRTVRGSQPGAMCRTRL*AFCTTA
Trigger: TGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCA...CATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGATGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGAGGTGGAGGTTCCCATaGGGCAAGGAAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRRWRFP*GKEGGG
Trigger: TCCCCCACCTTCCTTGCCCCATGGGAACCTCCACCT...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCGCTGGAGACATAGGCTaGACAGGCCGGGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLAGDIG*TGRAPE
Trigger: CTCCGGAGCCCGGCCTGTCCAGCCTATGTCTCCAGC...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571514.5
3UTR CAA 72 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTaGGCAAGGGACCGCCACCCTCACTCCCACGCTCAC +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATN*ARDRHPHSHAH
Trigger: GTGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGCCACGGGGAGGCAGGTaGAAGCCCTGCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQPRGGR*KPCHSH
Trigger: ATGACTGTGGCAGGGCTTTCACCTGCCTCCCCGTGG...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCCAGCCGATAGGTCATaGTGTCCAGCAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRPADRS*CPAGSP
Trigger: TGGACTGCCTGCTGGACATCATGACCTATCGGCTGG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATCAGCCAGCGCCTATGTaGATGGGGCCCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDQPAPM*MGPCRW
Trigger: CCACCTGCAGGGCCCCATTCACATAGGCGCTGGCTG...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAGACGGCCAACGAGGGTaGAGGCGTGGCCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQDGQRG*RRGPGS
Trigger: GCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTC...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGTCCACACTCCAGGTATaGGAAGGGCCGCATCCACTC +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRSTLQV*EGPHPL
Trigger: GAGTGGATGCGGCCCTTCTCATACCTGGAGTGTGGA...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAGGGAGCGCCCCACCTTaGTGCCAGGCATTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRGSAPP*CQALGH
Trigger: GTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCC...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACAAGAATGCCAGTCCTaGGAACCCACTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSQECQS*EPTSHR
Trigger: CCTGTGGGAAGTGGGTTCTCAGGACTGGCATTCTTG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp AGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGTACCAGCCGTCTCTACAGTGGTaGGCACCTGCTCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RQASLAEAFSTLLSLPYQPSLQW*APAPGA
Trigger: TGCACCTGGAGCAGGTGCTCACCACTGTAGAGACGG...CTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGTCAACTCCCTTCGGCTaGTCCATTCTGGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRSTPFG*SILAKR
Trigger: CCGCTTGGCCAGAATGGAGCAGCCGAAGGGAGTTGA...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGGTCCCAGCAGGGATCTaGTCCCGCTTCTGCCGCACT +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQVPAGI*SRFCRT
Trigger: AGTGCGGCAGAAGCGGGAGCAGATCCCTGCTGGGAC...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGACCAAGCCTAGGTAGGTaGAGGCATCCAGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGPSLGR*RHPGAG
Trigger: GCCCGCCCCTGGATGCCTGCACCTACCTAGGCTTGG...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAACCGGCCGCCAGAAGCTaGTGCTCCTCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEPAARS*CSSTWE
Trigger: CTCCCAGGTGGAGGAGCAGCAGCTTCTGGCGGCCGG...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCACCGGCCGCCAGAAGCTaGTGCTCCTCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFAPAARS*CSSTWE
Trigger: CTCCCAGGTGGAGGAGCAGCAGCTTCTGGCGGCCGG...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCCGGCCGCCAGAAGCTaGTGCTCCTCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGPAARS*CSSTWE
Trigger: CTCCCAGGTGGAGGAGCAGCAGCTTCTGGCGGCCGG...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGTGCAGGTGGCAGTGCTaGAGGACGCTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWCRWQC*RTLPGP
Trigger: GGGTCCTGGGAGCGTCCTGCAGCACTGCCACCTGCA...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCGCGTGTGGTGTCCCTaGAGGACAAGGTCACGCAGC +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLRVWCP*RTRSRS
Trigger: GCTGCGTGACCTTGTCCTGCAGGGACACCACACGCG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGACGTGCCGCGCCTTATaGAGGGCCTGGCGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQTCRAL*RAWRKN
Trigger: GTTCTTCCGCCAGGCCCTGCATAAGGCGCGGCACGT...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTCGCAGGCTGAGGTCCTaGCGGGCCTCCAGCACGTGC +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPRRLRS*RASSTC
Trigger: GCACGTGCTGGAGGCCCGGCAGGACCTCAGCCTGCG...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAACAGGCCAGTGCCCGTaGCGCCACACCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSETGQCP*RHTRVS
Trigger: GGAGACCCTGGTGTGGCGGCACGGGCACTGGCCTGT...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCCCGGCAGTTCCACCTaGTCTGTGGAGACAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRPGSST*SVETKC
Trigger: GCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCTCAGCCACCACCCACTaGCCAGGTCCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASSATTH*PGPGSS
Trigger: GGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTGA...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGCTCCGGGATGCGGCGTaGCCTGGCTCCGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKLRDAA*PGSDGP
Trigger: CGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAG...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGCAGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGAAGGTGCGGAGCAGCTaGTCACTCAGCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: QQRQASLAEAFSTLLSLPKVRSS*SLSWSS
Trigger: GGAACTCCAGCTGAGTGAGCAGCTGCTCCGCACCTT...CGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAGCTCAGACCAGGTGTaGAGCTCAAAGCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQSSDQV*SSKPPP
Trigger: CGGGGGCGGCTTTGAGCTGCACACCTGGTCTGAGCT...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATTGCCTGCCAGGATGCTaGTGGTGCCCAGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDCLPGC*WCPGQS
Trigger: GCTCTGGCCTGGGCACCAGCAGCATCCTGGCAGGCA...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR GCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCCACCACCCGGCCTaGGGCTCGCTGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKAHHPA*GSLQGS
Trigger: GCTGCCTTGCAGCGAGCCGCAGGCCGGGTGGTGGGC...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCATTCTGCACCACAGCAGGAAGTCGGGCATACCAGCTCCTCAGCACATCCTGCCTCCAGGTGCAGCACTaGGTGGATCAGGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: AFCTTAGSRAYQLLSTSCLQVQH*VDQGFR
Trigger: ACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAG...GCAGGATGTGCTGAGGAGCTGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTAGCACCTGCTCCAGGTaGAGCACTGCGTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLASTCSR*STAWIR
Trigger: CCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCT...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGCACACCAGGGTCTCCTaGCCCAGCCTGGTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWHTRVS*PSLVQR
Trigger: ACGCTGGACCAGGCTGGGGCAGGAGACCCTGGTGTG...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS-3UTR CCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTGCAGGGCCTTGGAGTaGGCTGTATCCAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSCRALE*AVSRPV
Trigger: GACTGGCCTGGATACAGCCCACTCCAAGGCCCTGCA...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTTGCAGGGCCTTGGAGTaGGCTGTATCCAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLACRALE*AVSRPV
Trigger: GACTGGCCTGGATACAGCCCACTCCAAGGCCCTGCA...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCACCGTGTAGCCGCGTGTaGTGTCCCTGCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPPCSRV*CPCRTR
Trigger: CCTTGTCCTGCAGGGACACCACACGCGGCTACACGG...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGGAAAGAGGCGGGCGCTaGGAAGGCAGTACTCTGCGG +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQERGGR*EGSTLR
Trigger: CCGCAGAGTACTGCCTTCCCAGCGCCCGCCTCTTTC...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAGCTCCCTCGAGGGGTaGAGCACAGGAAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQSSLEG*STGKRR
Trigger: CCGCCTCTTTCCTGTGCTCCACCCCTCGAGGGAGCT...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAGTTCCACCTGCTCTGTaGAGACAAAGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSVPPAL*RQSAGL
Trigger: CAGCCCAGCACTTTGTCTCCACAGAGCAGGTGGAAC...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGCTCATAGGCAAGGGGTaGCGTGTCACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQLIGKG*RVTPAP
Trigger: GGGGGCTGGAGTGACACGCCACCCCTTGCCTATGAG...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GAGCTTCTGGACAAAGCCCTCAGGCACCGTGACCTCTTCTACCTCCACCTTCAGCTTCAGCAGGGCCCCTaGGGCATGAGGCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: ELLDKALRHRDLFYLHLQLQQGP*GMRLAV
Trigger: TACTGCCAGCCTCATGCCCCAGGGGCCCTGCTGAAG...CTGAAGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGGCTTTGTCCAGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGAGGTGCAGCACTGCGTaGATCAGGGCTTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGRCSTA*IRASVP
Trigger: GGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCT...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGTACCTCCACCTTCAGTaGCAGCTGAGCCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGYLHLQ*QLSPGA
Trigger: CGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTA...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCATACCTCCACCTTCAGTaGCAGCTGAGCCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPYLHLQ*QLSPGA
Trigger: CGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTA...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGAGAGGCAGGCTTCCTTaGCGGAAGCCTTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRRGRLP*RKPSAH
Trigger: GTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCT...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGCAAGGCCCTCGGTCTTaGCCAGCACCGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWQGPRS*PAPPPR
Trigger: CCTTGGAGGCGGTGCTGGCCAAGACCGAGGGCCTTG...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCGCAGATTCGCAGAGGTaGGTGGGGAGTAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSADSQR*VGSRRW
Trigger: CCACCTCCTACTCCCCACCCACCTCTGCGAATCTGC...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 72 bp AGCACATCCTGCAGCAGGTTCCGAGCCAGGCGGGTCTaGCCAGTGTACACCAAGAGCAGGTGGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: STSCSRFRARRV*PVYTKSRWSLS
Trigger: GCTCAATGACCACCTGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCGGAACCTGCTGCAGGATGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
3UTR CAA 72 bp GCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGCATTCTGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: ASLAEAFSTLLS*PYQAVGILHHS
Trigger: GCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR TCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACCACCAGCAGGGCGTTaGGGGTGGCTCCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQPPAGR*GWLLRC
Trigger: GCAGCGGAGGAGCCACCCTCAACGCCCTGCTGGTGG...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGCCACCAGCAGGGCGTTaGGGGTGGCTCCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKPPAGR*GWLLRC
Trigger: GCAGCGGAGGAGCCACCCTCAACGCCCTGCTGGTGG...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGACCTTCAGTGGCAGCTaGGCCCGGGAGCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKTFSGS*ARERPT
Trigger: GGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGT...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp TTCCGAGCCAGGCGGGTCTTGCCAGTGTACACCAAGAGCAGGTGGTCATTGAGCTTCAGGCTCAGGCCCTaGGTGTCCACTTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: FRARRVLPVYTKSRWSLSFRLRP*VSTSTR
Trigger: CCTGGTTGAAGTGGACACTCAGGGCCTGAGCCTGAA...GCTCAATGACCACCTGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR TCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCGGCCTGGGATGGCAGTaGATCACTGGGTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSGLGWQ*ITGSLL
Trigger: TAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCC...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCAACAGCAGCATGTCGGTaGTGCAGACCCACACGCCTG +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPTAACR*CRPTRL
Trigger: CAGGCGTGTGGGTCTGCAGCACCGACATGCTGCTGT...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAATAACCCGCTACATCTaGATCGCCTTGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSITRYI*IALPQL
Trigger: GAGTTGGGGCAAGGCGATGCAGATGTAGCGGGTTAT...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGTCCTCCACCTGGGAGTaGACAATCTGGGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGSSTWE*TIWAPG
Trigger: TCCTGGGGCCCAGATTGTGCACTCCCAGGTGGAGGA...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGCCGCCAGAAGCTGCTaGTCCTCCACCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFAAARSC*SSTWEC
Trigger: GCACTCCCAGGTGGAGGAGCAGCAGCTTCTGGCGGC...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCCGCGTGTGGTGTCCCTaGAGGACAAGGTCACGCAGC +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASRVWCP*RTRSRS
Trigger: GCTGCGTGACCTTGTCCTGCAGGGACACCACACGCG...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGCGGGCCTCCAGCACGTaGCGCGCCTTATGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRRASST*RALCRA
Trigger: GGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCG...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGCGCAGGCTGAGGTCCTaGCGGGCCTCCAGCACGTGC +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRRRLRS*RASSTC
Trigger: GCACGTGCTGGAGGCCCGGCAGGACCTCAGCCTGCG...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATCACACCAGGGTCTCCTaGCCCAGCTGCAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDHTRVS*PSCNLV
Trigger: GACCAGGTTGCAGCTGGGGCAGGAGACCCTGGTGTG...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGCGCCACACAGGCCAGTaGCCGTGCCGCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKRHTGQ*PCRHTR
Trigger: CCTGGTGTGGCGGCACGGGCACTGGCCTGTGTGGCG...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGCCCCCACGGCCCTCTaGCATGCAGCCCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLAPTAL*HAAQDV
Trigger: GACGTCCTGGGCTGCATGGCAGAGGGCCGTGGGGGC...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCCGGCAGTTCCACCTaGTCTGTGGAGACAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVPGSST*SVETKC
Trigger: GCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGG...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAGCTCAGGCTCCGGGATaGGGCGTGCCCTGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQAQAPG*GVPWLR
Trigger: TCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGC...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATACAGTCATCTCATCCTaGCGAGGCCCCACCGCCAGC +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDTVISS*RGPTAS
Trigger: GCTGGCGGTGGGGCCTCGGCAGGATGAGATGACTGT...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CCCAGCAGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCGACATGCACGATCCCTaGACAGATGAAGGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: PSRGRLPWRKPSAHSSVCDMHDP*TDEGRL
Trigger: AAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTC...GCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGGACATGCACGATCCCTaGACAGATGAAGGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRDMHDP*TDEGRL
Trigger: AAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTC...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCAGGACATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTGGAGCCATGAGTTCCGAGTGGACATaGACGATCCCTGCACAGATG +
Preference number: 4 (lower is better)
Translates to: ARTSIIRRTVRGSQPGAMSSEWT*TIPAQM
Trigger: CATCTGTGCAGGGATCGTGCATGTCCACTCGGAACT...CATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGATGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGAGCTCAGACCAGGTGTaGAGCTCAAAGCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWSSDQV*SSKPPP
Trigger: CGGGGGCGGCTTTGAGCTGCACACCTGGTCTGAGCT...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR GCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTTGCCTGCCAGGATGCTaGTGGTGCCCAGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGCLPGC*WCPGQS
Trigger: GCTCTGGCCTGGGCACCAGCAGCATCCTGGCAGGCA...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTGCCCACCACCCGGCCTaGGGCTCGCTGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCAHHPA*GSLQGS
Trigger: GCTGCCTTGCAGCGAGCCGCAGGCCGGGTGGTGGGC...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGACCAGTGGTGAGCACCTaGTCCAGGTGCAGCACTGCG +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGPVVST*SRCSTA
Trigger: CGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGG...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACCTACTTGGTCCTaGCAGCCACCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLPPTWS*QPPPVV
Trigger: CACCACTGGAGGTGGCTGGCAGGACCAAGTAGGTGG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCGAGCCAGGCGGGTCTTaGCAGTGTACACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVEPGGS*QCTPRA
Trigger: TGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTC...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TTCCGAGCCAGGCGGGTCTTGCCAGTGTACACCAAGAGCAGGTGGTCATTGAGCAGGCTGTGGGCATTCTaGACCACAGCAGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: FRARRVLPVYTKSRWSLSRLWAF*TTAGSR
Trigger: CCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCT...GCTCAATGACCACCTGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp TTGCCGTACCAGGCTGTGGGCATTCTGCACCACAGCAGGAAGTCGGGCATACCAGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPYQAVGILHHSRKSGIPAHSSV*RTRLWA
Trigger: TGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGC...TGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGCTTCAACCAGGTGGATaGTGTAATTCCCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQLQPGG*CNSQGP
Trigger: AGGGCCTTGGGAATTACAGCATCCACCTGGTTGAAG...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CGGGAGCGCCCCACCTTGATGCCAGGCATTAGGCCACCTACTTGGTCCTGCCAGCTTCAACCAGGTGGATaGTGTAATTCCCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RERPTLMPGIRPPTWSCQLQPGG*CNSQGP
Trigger: AGGGCCTTGGGAATTACAGCATCCACCTGGTTGAAG...CTGGCAGGACCAAGTAGGTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGGTCCCAGGCACTCTCTaGTTGCCCAGATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRVPGTL*LPRSCS
Trigger: AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGAC...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGACTCCCAGCCATATaGCAAGGCTGGCTGTCAACC +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSGLPAI*QGWLST
Trigger: GGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCC...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGGAATCACTGGGTCACTaGTACCAACTTGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQESLGH*YQLGKG
Trigger: TCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTC...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTCGGATGTGACCACCTaGAGGAGTGGGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSSDVTT*RSGKAL
Trigger: CAGGGCTTTCCCACTCCTGCAGGTGGTCACATCCGA...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR GCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAACAACCCCAGAGACCTaGCGTCGCCCGGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLTTPET*RRPALG
Trigger: GCCGAGCGCCGGGCGACGGCAGGTCTCTGGGGTTGT...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS-3UTR CCA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGGCGGGCTCACGTGGGTaGCTAGGAGGCGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRAGSRG*LGGARQ
Trigger: CTGCCGAGCGCCTCCTAGCCACCCACGTGAGCCCGC...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCTGCTGCTCCTCCACCTaGGAGTGCACAATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLCCSST*ECTIWA
Trigger: GGCCCAGATTGTGCACTCCCAGGTGGAGGAGCAGCA...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGATGGGGCCCTGCAGGTaGCAGTGCTGCAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTEMGPCR*QCCRTL
Trigger: GAGCGTCCTGCAGCACTGCCACCTGCAGGGCCCCAT...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATTCGCCCCCATCCTCCTaGTGGTCCAGCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDSPPSS*WSSIHS
Trigger: GCTGTGGATGCTGGACCACCAGGAGGATGGGGGCGA...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGCGAGAGGCCAGCGTaGCAGCCCGATCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLGERPA*QPDPGT
Trigger: CGTGCCTGGATCGGGCTGCCACGCTGGCCTCTCGCC...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGCCTTATGCAGGGCCTaGCGGAAGAACAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWALCRA*RKNRSR
Trigger: CCGGGACCTGTTCTTCCGCCAGGCCCTGCATAAGGC...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGCCTTATGCAGGGCCTaGCGGAAGAACAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDALCRA*RKNRSR
Trigger: CCGGGACCTGTTCTTCCGCCAGGCCCTGCATAAGGC...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTGCATCCACTCAGGGTTaGCAGCTGGCCCGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGASTQG*QLARSA
Trigger: TGCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGC...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGACTCATAGGCAAGGGGTaGCGTGTCACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGLIGKG*RVTPAP
Trigger: GGGGGCTGGAGTGACACGCCACCCCTTGCCTATGAG...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGACTTCAGCAGGGCCCCTaGGGCATGAGGCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRLQQGP*GMRLAV
Trigger: TACTGCCAGCCTCATGCCCCAGGGGCCCTGCTGAAG...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGAGCTGGAGTTCCGAGTaGACATGCACGATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRSWSSE*TCTIPA
Trigger: TGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCT...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCCTGCCAGGATGCTGCTaGTGCCCAGGCCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: HSLLAQILLWSASFGSRFLPGCC*CPGQSR
Trigger: ACGGCTCTGGCCTGGGCACCAGCAGCATCCTGGCAG...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR CCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCAGGTGCAGCACTGCGTaGATCAGGGCTTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASRCSTA*IRASVP
Trigger: GGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCT...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGTACCTCCACCTTCAGTaGCAGCTGAGCCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWYLHLQ*QLSPGA
Trigger: CGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTA...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TACACCAAGAGCAGGTGGTCATTGAGCTTCTGGACAAAGCCCTCAGGCACCGTGCTCTGGCCATGCACGTaGGGGGCCAGGACATCCATC +
Preference number: 4 (lower is better)
Translates to: YTKSRWSLSFWTKPSGTVLWPCT*GARTSI
Trigger: GATGGATGTCCTGGCCCCCCACGTGCATGGCCAGAG...CACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCAAGGCCCTCGGTCTTaGCCAGCACCGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGQGPRS*PAPPPR
Trigger: CCTTGGAGGCGGTGCTGGCCAAGACCGAGGGCCTTG...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCTCACTGCTACCAACTTaGCAAGGGACCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVSLLPT*QGTATL
Trigger: GAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGA...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTTCACTGCTACCAACTTaGCAAGGGACCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLASLLPT*QGTATL
Trigger: GAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGA...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCACCAGCCGATAGGTCATaGTGTCCAGCAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPPADRS*CPAGSP
Trigger: TGGACTGCCTGCTGGACATCATGACCTATCGGCTGG...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAGGCCTGACACACCGCTaGATCTCTGCCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEGLTHR*ISASVP
Trigger: GGGCACTGAGGCAGAGATTCAGCGGTGTGTCAGGCC...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGCCATGGTAAGGGGCTaGTCGCGAAGCTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFAAMVRG*SRSSLH
Trigger: GTGGAGGGAGCTTCGCGATCAGCCCCTTACCATGGC...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGCGATCCCTGCACAGATaGAGGCCGCCTTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTERSLHR*RPPSAG
Trigger: CCCTGCTGAAGGCGGCCTTCATCTGTGCAGGGATCG...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGAAGCCCTCAGGCACCGTaGCCTCTTCTACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGSPQAP*PLLPPP
Trigger: AGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGGCT...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAAAGGGCAACAGGTTaGGGCCTCGGTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFAERATG*GLGPQQ
Trigger: CTGCTGGGGACCGAGGCCTCAACCTGTTGCCCTTTC...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCAAGAATGCCAGTCCTaGGAACCCACTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHQECQS*EPTSHR
Trigger: CCTGTGGGAAGTGGGTTCTCAGGACTGGCATTCTTG...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAGCAGGACATCGGATGTaGCCACCTGCAGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRAGHRM*PPAGVG
Trigger: TCCCACTCCTGCAGGTGGTCACATCCGATGTCCTGC...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACGCAGCTCCCGGCCATaGAGGGCCTTGGAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQRSSRP*RALEWA
Trigger: AGCCCACTCCAAGGCCCTGCATGGCCGGGAGCTGCG...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTGGGAAGGCAGTACTCTaGGGGCAGCGTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGGKAVL*GQRLRV
Trigger: GACCCTGAGACGCTGCCCGCAGAGTACTGCCTTCCC...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACGCCTCCACGCCCGCTaGCAGGTCTCCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQRLHAR*QVSTLQ
Trigger: CTGGAGTGTGGAGACCTGGCAGCGGGCGTGGAGGCG...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAACAGTCATCTCATCCTaGCGAGGCCCCACCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFATVISS*RGPTAS
Trigger: GCTGGCGGTGGGGCCTCGGCAGGATGAGATGACTGT...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGACATGCACGATCCCTaGACAGATGAAGGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSDMHDP*TDEGRL
Trigger: AAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTC...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TACACCAAGAGCAGGTGGTCATTGAGCTTCTGGACAAAGCCCTCAGGCACCGTGAGCACCTGCTCCAGGTaGAGCACTGCGTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: YTKSRWSLSFWTKPSGTVSTCSR*STAWIR
Trigger: CCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCT...CACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCACCAGTGGTGAGCACCTaGTCCAGGTGCAGCACTGCG +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFAPVVST*SRCSTA
Trigger: CGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGG...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLAHSSV*RTRLWA
Trigger: TGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGC...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCAGGCACTCTCTGCTTaGCCAGATCTTGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLAQALSA*PDLALV
Trigger: GACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TACACCAAGAGCAGGTGGTCATTGAGCTTCTGGACAAAGCCCTCAGGCACCGTGCCACCTACTTGGTCCTaGCAGCCACCTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: YTKSRWSLSFWTKPSGTVPPTWS*QPPPGS
Trigger: GGAACCAGGAGGTGGCTGGCAGGACCAAGTAGGTGG...CACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR GCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGGTTGAGATATGTGCCTaGCCCCTGTCTCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGVEICA*PLSLGE
Trigger: CTCCCCCAGAGACAGGGGGCAGGCACATATCTCAAC...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS-3UTR CCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGTAGGCCGGGCTCCCTaGGAGGGCGATCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKVGRAP*EGDHSG
Trigger: GCCAGAGTGATCGCCCTCCCAGGGAGCCCGGCCTAC...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTATGGGAGTGCACAATCTaGGCCCCAGGAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLWECTI*APGAPG
Trigger: CCCCGGGGCTCCTGGGGCCCAGATTGTGCACTCCCA...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGCTCCCAGGACCCAGCTaGACAGGGCCCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRLPGPS*TGPSSR
Trigger: CCTGCTGGAGGGCCCTGTCCAGCTGGGTCCTGGGAG...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGGCCATGCAGGGCCTTaGAGTGGGCTGTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTEGHAGP*SGLYPG
Trigger: GCCTGGATACAGCCCACTCCAAGGCCCTGCATGGCC...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCCGTGTAGCCGCGTGTaGTGTCCCTGCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGPCSRV*CPCRTR
Trigger: CCTTGTCCTGCAGGGACACCACACGCGGCTACACGG...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAACGAGGGTGAAGGCGTaGCCCGGGGAGCCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLTRVKA*PGEPCS
Trigger: GCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGT...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCTCCCTCGAGGGGTaGAGCACAGGAAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLSSLEG*STGKRR
Trigger: CCGCCTCTTTCCTGTGCTCCACCCCTCGAGGGAGCT...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAAGCTCCCTCGAGGGGTaGAGCACAGGAAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFASSLEG*STGKRR
Trigger: CCGCCTCTTTCCTGTGCTCCACCCCTCGAGGGAGCT...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGTCGCCCCCATCCTCCTaGTGGTCCAGCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTESPPSS*WSSIHS
Trigger: GCTGTGGATGCTGGACCACCAGGAGGATGGGGGCGA...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAGCCCCAGCTGCAACCTaGTCCAGCGTGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQAPAAT*SSVASR
Trigger: CCTGCTGGCCACGCTGGACCAGGTTGCAGCTGGGGC...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAACTCATAGGCAAGGGGTaGCGTGTCACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSELIGKG*RVTPAP
Trigger: GGGGGCTGGAGTGACACGCCACCCCTTGCCTATGAG...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCAGCTGGAGTTCCGAGTaGACATGCACGATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVSWSSE*TCTIPA
Trigger: TGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCT...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCATTCTGCACCACAGCAGGAAGTCGGGCATACCAGCTCCTCAGCACATCCTGCAGCTGGAGTTCCGAGTaGACATGCACGATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AFCTTAGSRAYQLLSTSCSWSSE*TCTIPA
Trigger: TGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCT...GCAGGATGTGCTGAGGAGCTGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACAGCTGCTCACTCAGCTaGAGTTCCGAGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHSCSLS*SSEWTC
Trigger: GCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCT...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR CCA 90 bp TTCCGAGCCAGGCGGGTCTTGCCAGTGTACACCAAGAGCAGGTGGTCATTGAGCAGCTGCTCACTCAGCTaGAGTTCCGAGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: FRARRVLPVYTKSRWSLSSCSLS*SSEWTC
Trigger: GCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCT...GCTCAATGACCACCTGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTAGCTGCTCACTCAGCTaGAGTTCCGAGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSSCSLS*SSEWTC
Trigger: GCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCT...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR CCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACCCAGGCCAGAGCCGTaGGGCAGCTCAGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQPRPEP*GSSDQV
Trigger: CACCTGGTCTGAGCTGCCCCACGGCTCTGGCCTGGG...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR CCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCTGCCGTACCAGGCTGTaGGCATTCTGCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLCRTRL*AFCTTA
Trigger: TGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCA...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAACTCTGGCCATGCACGTaGGGGGCCAGGACATCCATC +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSELWPCT*GARTSI
Trigger: GATGGATGTCCTGGCCCCCCACGTGCATGGCCAGAG...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTACTCTGGCCATGCACGTaGGGGGCCAGGACATCCATC +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLLWPCT*GARTSI
Trigger: GATGGATGTCCTGGCCCCCCACGTGCATGGCCAGAG...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCTCCTCAGCACATCCTGCAGCAGGTTCCGAGCCAGGCGGGTCTTGCCAGTGTAGGCCTCCTTTTGCTGTaGCTCCTTGGTCAACAGATA +
Preference number: 4 (lower is better)
Translates to: APQHILQQVPSQAGLASVGLLLL*LLGQQI
Trigger: TATCTGTTGACCAAGGAGCCACAGCAAAAGGAGGCC...TACACTGGCAAGACCCGCCTGGCTCGGAACCTGCTGCAGGATGTGCTGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGTCACTGCTACCAACTTaGCAAGGGACCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGSLLPT*QGTATL
Trigger: GAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGA...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGTTGCTAGTTAAGGCCTaGGATGGCAGTGAATCACTG +
Preference number: 4 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQLLVKA*DGSESL
Trigger: CAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAA...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGACCACCTGCAGGAGTaGGAAAGCCCTGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSDHLQE*ESPVNR
Trigger: TCTGTTCACAGGGCTTTCCCACTCCTGCAGGTGGTC...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378912.6
3UTR CAA 72 bp CGGGTCTTGCCAGTGTACACCAAGAGCAGGTGGTCATaGAGCTTCTGGACAAAGCCCTCAGGCACCGTGACC +
Preference number: 4 (lower is better)
Translates to: RVLPVYTKSRWS*SFWTKPSGTVT
Trigger: GGTCACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTACACTGGCAAGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR TCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGCACTCCAGGGCACGTTaGGATATGTGCCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTEHSRAR*DMCLPP
Trigger: AGGGGGCAGGCACATATCTCAACGTGCCCTGGAGTG...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGTCCACACTCCAGGTATaGGAAGGGCCGCATCCACTC +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWSTLQV*EGPHPL
Trigger: GAGTGGATGCGGCCCTTCTCATACCTGGAGTGTGGA...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGATCCACACTCCAGGTATaGGAAGGGCCGCATCCACTC +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGSTLQV*EGPHPL
Trigger: GAGTGGATGCGGCCCTTCTCATACCTGGAGTGTGGA...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGAGACAAAGTGCTGGGCTaGCATCACAGCCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGDKVLG*HHSLAD
Trigger: ATCCGCCAGGCTGTGATGTCAGCCCAGCACTTTGTC...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCAGCCCTCAGGCACCGTaGCCTCTTCTACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: HSLLAQILLWSASFGSRFSPQAP*PLLPPP
Trigger: AGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGGCT...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCTTCAGGCTCAGGCCCTaGGTGTCCACTTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASFRLRP*VSTSTR
Trigger: CCTGGTTGAAGTGGACACTCAGGGCCTGAGCCTGAA...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTGAAAGGGCAACAGGTTaGGGCCTCGGTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPERATG*GLGPQQ
Trigger: CTGCTGGGGACCGAGGCCTCAACCTGTTGCCCTTTC...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAGGCCTGGGATGGCAGTaGATCACTGGGTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRGLGWQ*ITGSLL
Trigger: TAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCC...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGGTGGCTCCTCCGCTaGCCACACGCTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLGWLLR*PHASLG
Trigger: ACCCAGAGAAGCGTGTGGGCAGCGGAGGAGCCACCC...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGAAGGATCCAGGCCGAGTaGAGGACATCGGATGTGACC +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGRIQAE*RTSDVT
Trigger: GGTCACATCCGATGTCCTGCACTCGGCCTGGATCCT...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCAAGTCTCGACCCATGTaGAGAATGAGGATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVKSRPM*RMRIQA
Trigger: GGCCTGGATCCTCATTCTGCACATGGGTCGAGACTT...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAGCAGGCAGTCCAGGTTaGAGACCAAGGCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEAGSPG*RPRLPR
Trigger: CCGTGGAAGCCTTGGTCTGCAACCTGGACTGCCTGC...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGCAGGCAGTCCAGGTTaGAGACCAAGGCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFAAGSPG*RPRLPR
Trigger: CCGTGGAAGCCTTGGTCTGCAACCTGGACTGCCTGC...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACACACCGCTGAATCTCTaGCTCAGTGCCCTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHTPLNL*LSALVV
Trigger: TACTACCAGGGCACTGAGGCAGAGATTCAGCGGTGT...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAACATCTGCATCGCCTTaGCCCAACTCTGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLTSASP*PNSGGL
Trigger: GAGGCCCCCAGAGTTGGGGCAAGGCGATGCAGATGT...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTATCCTCCACCTGGGAGTaGACAATCTGGGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLSSTWE*TIWAPG
Trigger: TCCTGGGGCCCAGATTGTGCACTCCCAGGTGGAGGA...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAGCCGCCAGAAGCTGCTaGTCCTCCACCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQAARSC*SSTWEC
Trigger: GCACTCCCAGGTGGAGGAGCAGCAGCTTCTGGCGGC...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCGCCTCCACGCCCGCTaGCAGGTCTCCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCRLHAR*QVSTLQ
Trigger: CTGGAGTGTGGAGACCTGGCAGCGGGCGTGGAGGCG...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGAGGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCTCTGTGGAGACAAAGTaGTGGGCTGACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: QEEQRLHLGPCPPGHSPVSVETK*WADITA
Trigger: GGCTGTGATGTCAGCCCAGCACTTTGTCTCCACAGA...GACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGCCCGGCAGTTCCACCTaGTCTGTGGAGACAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWPGSST*SVETKC
Trigger: GCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGG...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAATCAGCCACCACCCACTaGCCAGGTCCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQSATTH*PGPGSS
Trigger: GGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTGA...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCAGTTCCGAGTGGACATaGACGATCCCTGCACAGATG +
Preference number: 4 (lower is better)
Translates to: VTVLSQALSACPDLALVSSSEWT*TIPAQM
Trigger: CATCTGTGCAGGGATCGTGCATGTCCACTCGGAACT...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATAAGGTGCGGAGCAGCTaGTCACTCAGCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDKVRSS*SLSWSS
Trigger: GGAACTCCAGCTGAGTGAGCAGCTGCTCCGCACCTT...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000571514.5
CDS-3UTR GCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAACTCCAGGTGCAGCACTaGGTGGATCAGGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSELQVQH*VDQGFR
Trigger: ACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAG...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTAGCACCTGCTCCAGGTaGAGCACTGCGTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGSTCSR*STAWIR
Trigger: CCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCT...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGAAGGCTGTGGGCATTCTaGACCACAGCAGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGRLWAF*TTAGSR
Trigger: CCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCT...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWAHSSV*RTRLWA
Trigger: TGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGC...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATGCCTGCCAGGATGCTaGTGGTGCTCAGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRCLPGC*WCSAGV
Trigger: AACTCCAGCTGAGCACCAGCAGCATCCTGGCAGGCA...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR GCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAACAGTGCCTGCCAGGATaGTGCTGGTGCTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEQCLPG*CWCSAG
Trigger: TCCAGCTGAGCACCAGCAGCATCCTGGCAGGCACTG...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR CCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCAAAAACAGAGACAGCTaGACAGGCCGGGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASKNRDS*TGRAPE
Trigger: CTCCGGAGCCCGGCCTGTCCAGCTGTCTCTGTTTTT...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCCCAGGACCCAGCTaGACAGGGCCCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECLPGPS*TGPSSR
Trigger: CCTGCTGGAGGGCCCTGTCCAGCTGGGTCCTGGGAG...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGCAGCGCCTATGTGAATaGGGCCCTGCAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTEQRLCE*GPAGGS
Trigger: ACTGCCACCTGCAGGGCCCCATTCACATAGGCGCTG...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCTGCAGGGCCTTGGAGTaGGCTGTATCCAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: HSLLAQILLWSASFGSRFCRALE*AVSRPV
Trigger: GACTGGCCTGGATACAGCCCACTCCAAGGCCCTGCA...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGGTGGAGACAAAGTGCTaGGCTGACATCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQVETKC*ADITAW
Trigger: CCAGGCTGTGATGTCAGCCCAGCACTTTGTCTCCAC...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCCAGGACATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTGGAGCCATGTACACCAAGAGCAGGTaGTCATTGAGCTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: ARTSIIRRTVRGSQPGAMYTKSR*SLSFWT
Trigger: TGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTA...CATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGATGTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGGGCCTCCTTTTGCTGTaGCTCCTTGGTCAACAGATA +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRGLLLL*LLGQQI
Trigger: TATCTGTTGACCAAGGAGCCACAGCAAAAGGAGGCC...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGCAAGGCCCTCGGTCTTaGCCAGCACCGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRQGPRS*PAPPPR
Trigger: CCTTGGAGGCGGTGCTGGCCAAGACCGAGGGCCTTG...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCGCCCAGATCTTGCTCTaGTCAGCTTCCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLAQILL*SASFGS
Trigger: GCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGC...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAATGGCAGTGAATCACTaGGTCACTGCTACCAACTTG +
Preference number: 4 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSMAVNH*VTATNL
Trigger: CAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCAT...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCTCAGGCAGACGCCCTaGAGGATGGCACCCTCGAAT +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGLRQTP*RMAPSN
Trigger: ATTCGAGGGTGCCATCCTCCAGGGCGTCTGCCTGAG...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378912.6
3UTR CAA 72 bp CAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTaGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCA +
Preference number: 4 (lower is better)
Translates to: QSCPRHSLLAQI*LWSASFGSRFA
Trigger: TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTACTTCCAGTTCTCTCTaGAAGACCTGGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLATSSSL*KTWTLS
Trigger: GGACAGTGTCCAGGTCTTTCAGAGAGAACTGGAAGT...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGCCTGACACACCGCTaGATCTCTGCCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLGLTHR*ISASVP
Trigger: GGGCACTGAGGCAGAGATTCAGCGGTGTGTCAGGCC...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGCCCGCCCATCAGGCCTaGCACACCGCTGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRPAHQA*HTAESL
Trigger: CAGAGATTCAGCGGTGTGTCAGGCCTGATGGGCGGG...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR TCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCAGGAACTCACTGGCTaGGGAGGTCATGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLQELTG*GGHVAV
Trigger: TACAGCTACATGACCTCCTCAGCCAGTGAGTTCCTG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGCAGGAACTCACTGGCTaGGGAGGTCATGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGQELTG*GGHVAV
Trigger: TACAGCTACATGACCTCCTCAGCCAGTGAGTTCCTG...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGAACACCTGTCCTCTTaGAGAATTCACTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSEHLSS*RIHSRA
Trigger: TGCCCTGGAGTGAATTCTTCAAGAGGACAGGTGTTC...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACGATCCCTGCACAGATaGAGGCCGCCTTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQRSLHR*RPPSAG
Trigger: CCCTGCTGAAGGCGGCCTTCATCTGTGCAGGGATCG...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCATTCAGGCTCAGGCCCTaGGTGTCCACTTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFAFRLRP*VSTSTR
Trigger: CCTGGTTGAAGTGGACACTCAGGGCCTGAGCCTGAA...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTACTCCCACGCTCACATaGGGGTTGAGTGTAAGTCTA +
Preference number: 4 (lower is better)
Translates to: VHQVTVLSQALSACPDLATPTLT*GLSVSL
Trigger: TAGACTTACACTCAACCCTCATGTGAGCGTGGGAGT...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTGCAGCATGTCGGTGCTaGAGACCCACACGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCAACRC*RPTRLA
Trigger: CGCCAGGCGTGTGGGTCTGCAGCACCGACATGCTGC...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAACGTGCCGCGCCTTATaGAGGGCCTGGCGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQTCRAL*RAWRKN
Trigger: GTTCTTCCGCCAGGCCCTGCATAAGGCGCGGCACGT...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAAGCCCCCACGGCCCTCTaGCATGCAGCCCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKAPTAL*HAAQDV
Trigger: GACGTCCTGGGCTGCATGGCAGAGGGCCGTGGGGGC...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAACAGTCATCTCATCCTaGCGAGGCCCCACCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLTVISS*RGPTAS
Trigger: GCTGGCGGTGGGGCCTCGGCAGGATGAGATGACTGT...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGACATGCACGATCCCTaGACAGATGAAGGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDDMHDP*TDEGRL
Trigger: AAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTC...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTCTCCAGGTGCAGCACTaGGTGGATCAGGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPLQVQH*VDQGFR
Trigger: ACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAG...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAAGGCTGTGGGCATTCTaGACCACAGCAGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSERLWAF*TTAGSR
Trigger: CCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCT...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCGCCATGAGCTTCTTCTaGTCCCAGTACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASAMSFF*SQYEVR
Trigger: CCTGACCTCGTACTGGGAGCAGAAGAAGCTCATGGC...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCAGGTTTTCTCCTGTTaGAGAGAGAAGCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRQVFSC*REKPAS
Trigger: TGAAGCTGGCTTCTCTCTGCAACAGGAGAAAACCTG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGTCCCAGGCACTCTCTaGTTGCCCAGATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDVPGTL*LPRSCS
Trigger: AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGAC...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCAATCCAAGTGAAGCCTaGCCGGGCACTCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASNPSEA*PGTQVF
Trigger: GAACACCTGAGTGCCCGGGCAGGCTTCACTTGGATT...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR CCA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCAAAAACAGAGACAGCTaGACAGGCCGGGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: HSLLAQILLWSASFGSRFKNRDS*TGRAPE
Trigger: CTCCGGAGCCCGGCCTGTCCAGCTGTCTCTGTTTTT...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGCCATGCAGGGCCTTaGAGTGGGCTGTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLGHAGP*SGLYPG
Trigger: GCCTGGATACAGCCCACTCCAAGGCCCTGCATGGCC...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGGCCATGCAGGGCCTTaGAGTGGGCTGTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRGHAGP*SGLYPG
Trigger: GCCTGGATACAGCCCACTCCAAGGCCCTGCATGGCC...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGCCGTGTAGCCGCGTGTaGTGTCCCTGCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRPCSRV*CPCRTR
Trigger: CCTTGTCCTGCAGGGACACCACACGCGGCTACACGG...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGCCTTATGCAGGGCCTaGCGGAAGAACAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLALCRA*RKNRSR
Trigger: CCGGGACCTGTTCTTCCGCCAGGCCCTGCATAAGGC...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTGCATCCACTCAGGGTTaGCAGCTGGCCCGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCASTQG*QLARSA
Trigger: TGCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGC...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGTTCCACCTGCTCTGTaGAGACAAAGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWVPPAL*RQSAGL
Trigger: CAGCCCAGCACTTTGTCTCCACAGAGCAGGTGGAAC...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGAGTTCCACCTGCTCTGTaGAGACAAAGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RHSLLAQILLWSASFGSRVPPAL*RQSAGL
Trigger: CAGCCCAGCACTTTGTCTCCACAGAGCAGGTGGAAC...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGCTTCAGCAGGGCCCCTaGGGCATGAGGCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRLQQGP*GMRLAV
Trigger: TACTGCCAGCCTCATGCCCCAGGGGCCCTGCTGAAG...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATGCCGTACCAGGCTGTaGGCATTCTGCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSECRTRL*AFCTTA
Trigger: TGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCA...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCTGGTCAGCTTCCTTTaGGAGCAGATTCGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLLVSFL*EQIRRG
Trigger: ACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGTTTCCAGGGCCCTTGTaGAATGAGAAGGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGFPGPL*NEKASH
Trigger: ATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAA...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGATGGCAGTGAATCACTaGGTCACTGCTACCAACTTG +
Preference number: 4 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRMAVNH*VTATNL
Trigger: CAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCAT...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
3UTR CAA 72 bp CCACAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTaGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTG +
Preference number: 4 (lower is better)
Translates to: PQAPGHLARSVV*LVKAWDGSESL
Trigger: CAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGACAGGAACTCACTGGCTaGGGAGGTCATGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGQELTG*GGHVAV
Trigger: TACAGCTACATGACCTCCTCAGCCAGTGAGTTCCTG...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACACTCCAGGGCACGTTaGGATATGTGCCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQHSRAR*DMCLPP
Trigger: AGGGGGCAGGCACATATCTCAACGTGCCCTGGAGTG...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGGAACACCTGTCCTCTTaGAGAATTCACTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QALSACPDLALVSFLWEQEHLSS*RIHSRA
Trigger: TGCCCTGGAGTGAATTCTTCAAGAGGACAGGTGTTC...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCAGCCACCTCCAGTGGTaGGCACCTGCTCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECSHLQW*APAPGA
Trigger: TGCACCTGGAGCAGGTGCTCACCACTGGAGGTGGCT...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTAGCCACCTCCAGTGGTaGGCACCTGCTCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCSHLQW*APAPGA
Trigger: TGCACCTGGAGCAGGTGCTCACCACTGGAGGTGGCT...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAAGCCCTCAGGCACCGTaGCCTCTTCTACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLSPQAP*PLLPPP
Trigger: AGGTGGAGGTAGAAGAGGTCACGGTGCCTGAGGGCT...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAACAGCAGCATGTCGGTaGTGCAGACCCACACGCCTG +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQTAACR*CRPTRL
Trigger: CAGGCGTGTGGGTCTGCAGCACCGACATGCTGCTGT...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGAGCACCTGCTCCAGGTaGAGCACTGCGTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRSTCSR*STAWIR
Trigger: CCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCT...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGCCACCTACTTGGTCCTaGCAGCCACCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKPPTWS*QPPPVV
Trigger: CACCACTGGAGGTGGCTGGCAGGACCAAGTAGGTGG...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCTTCAACCAGGTGGATaGTGTAATTCCCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLLQPGG*CNSQGP
Trigger: AGGGCCTTGGGAATTACAGCATCCACCTGGTTGAAG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGCTTCAACCAGGTGGATaGTGTAATTCCCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGLQPGG*CNSQGP
Trigger: AGGGCCTTGGGAATTACAGCATCCACCTGGTTGAAG...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCAGGCACTCTCTGCTTaGCCAGATCTTGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGQALSA*PDLALV
Trigger: GACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTGGACTCCCAGCCATATaGCAAGGCTGGCTGTCAACC +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPGLPAI*QGWLST
Trigger: GGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCC...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCACTAAGCCATAGGGAATaGCTCAAAGGGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPLSHRE*LKGPLQ
Trigger: CTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAG...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGGAATCACTGGGTCACTaGTACCAACTTGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGESLGH*YQLGKG
Trigger: TCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTC...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATTCATGTAGCTGTAGCTaGCGCTGGAGACATAGGCTG +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDSCSCS*RWRHRL
Trigger: CAGCCTATGTCTCCAGCGGCAGCTACAGCTACATGA...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS-3UTR CCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAATGCTGCTCCTCCACCTaGGAGTGCACAATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQCCSST*ECTIWA
Trigger: GGCCCAGATTGTGCACTCCCAGGTGGAGGAGCAGCA...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGTGCTGCTCCTCCACCTaGGAGTGCACAATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRCCSST*ECTIWA
Trigger: GGCCCAGATTGTGCACTCCCAGGTGGAGGAGCAGCA...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAAGCTGGAGTTCCGAGTaGACATGCACGATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSESWSSE*TCTIPA
Trigger: TGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCT...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTTGCCGTACCAGGCTGTaGGCATTCTGCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPCRTRL*AFCTTA
Trigger: TGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCA...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCCTGGTCAGCTTCCTTTaGGAGCAGATTCGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASLVSFL*EQIRRG
Trigger: ACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAG...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGTTTCCAGGGCCCTTGTaGAATGAGAAGGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWFPGPL*NEKASH
Trigger: ATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAA...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCCATATGCCAAGGCTaGCTGTCAACCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTEAICQG*LSTLSR
Trigger: CCTGGAAAGGGTTGACAGCCAGCCTTGGCATATGGC...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTGCCAGGATGCTGCTaGTGCTCAGCTGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQLPGCC*CSAGVP
Trigger: CGGAACTCCAGCTGAGCACCAGCAGCATCCTGGCAG...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR TCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGACCCATGTGCAGAATaGGGATCCAGGCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRDPCAE*GSRPSA
Trigger: TGCACTCGGCCTGGATCCTCATTCTGCACATGGGTC...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTATCTGCTCCCGCTTCTaGCGCACTTCCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPICSRF*RTSSSL
Trigger: GAGAGAACTGGAAGTGCGGCAGAAGCGGGAGCAGAT...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCGACCACAGTGAAGCCTaGCCGGGCACTCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECDHSEA*PGTQVF
Trigger: GAACACCTGAGTGCCCGGGCAGGCTTCACTGTGGTC...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288078.11
CDS-3UTR GCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGACACCGCTGAATCTCTaGCTCAGTGCCCTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTETPLNL*LSALVV
Trigger: TACTACCAGGGCACTGAGGCAGAGATTCAGCGGTGT...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTGTTGAGATATGTGCCTaGCCCCTGTCTCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPVEICA*PLSLPA
Trigger: AGCTGGGAGAGACAGGGGGCAGGCACATATCTCAAC...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAAGGCTGTGGGCATTCTaGACCACAGCAGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLRLWAF*TTAGSR
Trigger: CCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCT...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRAHSSV*RTRLWA
Trigger: TGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGC...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGATGCTTGCCCAGATCTTaGTCTGGTCAGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGCLPRS*SGQLPL
Trigger: CAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCA...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAGGACTCCCAGCCATATaGCAAGGCTGGCTGTCAACC +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQGLPAI*QGWLST
Trigger: GGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCC...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCCTAAGCCATAGGGAATaGCTCAAAGGGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KVGDTVAPGFLLLQREASLSHRE*LKGPLQ
Trigger: CTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAG...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCACACTGTCCTTGTACTaGCAGGTCAGGATGATGACT +
Preference number: 4 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLTLSLY*QVRMMT
Trigger: AGTCATCATCCTGACCTGCCAGTACAAGGACAGTGT...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGCCAGGAAGTCCTCCCTaGTCACGTTCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKPGSPP*SRSQPC
Trigger: GCATGGCTGAGAACGTGACCAGGGAGGACTTCCTGG...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCAGCGCCTATGTGAATaGGGCCCTGCAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECQRLCE*GPAGGS
Trigger: ACTGCCACCTGCAGGGCCCCATTCACATAGGCGCTG...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAAGAGGCAGGCTTCCTTaGCGGAAGCCTTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLRGRLP*RKPSAH
Trigger: GTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCT...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCATTCTGCACCACAGCAGGAAGTCGGGCATACCAGCTCCTCAGCACATCCTGCTTTGCTGTGGCTCCTTaGTCAACAGATAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: AFCTTAGSRAYQLLSTSCFAVAP*STDRES
Trigger: GCTTTCTCTATCTGTTGACCAAGGAGCCACAGCAAA...GCAGGATGTGCTGAGGAGCTGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CCA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACTTTGCTGTGGCTCCTTaGTCAACAGATAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GMAVNHWVTATNLARDRHFAVAP*STDRES
Trigger: GCTTTCTCTATCTGTTGACCAAGGAGCCACAGCAAA...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGGCCTCCTTTTGCTGTaGCTCCTTGGTCAACAGATA +
Preference number: 4 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWGLLLL*LLGQQI
Trigger: TATCTGTTGACCAAGGAGCCACAGCAAAAGGAGGCC...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTAGGTGGAGGTTCCCATaGGGCAAGGAAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCRWRFP*GKEGGG
Trigger: TCCCCCACCTTCCTTGCCCCATGGGAACCTCCACCT...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCTGGTCAGCTTCCTTTaGGAGCAGATTCGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGLVSFL*EQIRRG
Trigger: ACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAG...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTGCCCAGATCTTGCTCTaGTCAGCTTCCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPAQILL*SASFGS
Trigger: GCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGC...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTGCCATATGCCAAGGCTaGCTGTCAACCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPAICQG*LSTLSR
Trigger: CCTGGAAAGGGTTGACAGCCAGCCTTGGCATATGGC...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCATTGCTAGTTAAGGCCTaGGATGGCAGTGAATCACTG +
Preference number: 4 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPLLVKA*DGSESL
Trigger: CAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAA...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGAGACGCCCTGGAGGATaGCACCCTCGAATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRRRPGG*HPRIQR
Trigger: TCTCTGGATTCGAGGGTGCCATCCTCCAGGGCGTCT...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR TCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAAAGCCACCTCCAGTGGTaGGCACCTGCTCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKSHLQW*APAPGA
Trigger: TGCACCTGGAGCAGGTGCTCACCACTGGAGGTGGCT...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTTTCAGGCTCAGGCCCTaGGTGTCCACTTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCFRLRP*VSTSTR
Trigger: CCTGGTTGAAGTGGACACTCAGGGCCTGAGCCTGAA...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAACTCCCACGCTCACATaGGGGTTGAGTGTAAGTCTA +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSETPTLT*GLSVSL
Trigger: TAGACTTACACTCAACCCTCATGTGAGCGTGGGAGT...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGCAAGAATGCCAGTCCTaGGAACCCACTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKQECQS*EPTSHR
Trigger: CCTGTGGGAAGTGGGTTCTCAGGACTGGCATTCTTG...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTTCAACTCCCTTCGGCTaGTCCATTCTGGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCSTPFG*SILAKR
Trigger: CCGCTTGGCCAGAATGGAGCAGCCGAAGGGAGTTGA...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAATCTGCTCCCGCTTCTaGCGCACTTCCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLICSRF*RTSSSL
Trigger: GAGAGAACTGGAAGTGCGGCAGAAGCGGGAGCAGAT...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTAGGATCCAGGCCGAGTaGAGGACATCGGATGTGACC +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCRIQAE*RTSDVT
Trigger: GGTCACATCCGATGTCCTGCACTCGGCCTGGATCCT...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGTTGAGATATGTGCCTaGCCCCTGTCTCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKVEICA*PLSLPA
Trigger: AGCTGGGAGAGACAGGGGGCAGGCACATATCTCAAC...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTTCTGTGGAGACAAAGTaGTGGGCTGACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPSVETK*WADITA
Trigger: GGCTGTGATGTCAGCCCAGCACTTTGTCTCCACAGA...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCGAGCCAGGCGGGTCTTaGCAGTGTACACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECEPGGS*QCTPRA
Trigger: TGCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTC...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGCCATGAGCTTCTTCTaGTCCCAGTACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRAMSFF*SQYEVR
Trigger: CCTGACCTCGTACTGGGAGCAGAAGAAGCTCATGGC...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATCAGGTTTTCTCCTGTTaGAGAGAGAAGCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDQVFSC*REKPAS
Trigger: TGAAGCTGGCTTCTCTCTGCAACAGGAGAAAACCTG...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCATGCTTGCCCAGATCTTaGTCTGGTCAGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFACLPRS*SGQLPL
Trigger: CAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCA...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGTGCTTGCCCAGATCTTaGTCTGGTCAGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTECLPRS*SGQLPL
Trigger: CAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCA...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTACAGGCACTCTCTGCTTaGCCAGATCTTGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLQALSA*PDLALV
Trigger: GACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAATCGGCTGCTCCATTCTaGCCAAGCGGAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKSAAPF*PSGGAS
Trigger: GGAAGCCCCTCCGCTTGGCCAGAATGGAGCAGCCGA...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGAACACTGTCCTTGTACTaGCAGGTCAGGATGATGACT +
Preference number: 4 (lower is better)
Translates to: GPLWNEKASHRICKGHVGTLSLY*QVRMMT
Trigger: AGTCATCATCCTGACCTGCCAGTACAAGGACAGTGT...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAAGAAAGAGGCGGGCGCTaGGAAGGCAGTACTCTGCGG +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKERGGR*EGSTLR
Trigger: CCGCAGAGTACTGCCTTCCCAGCGCCCGCCTCTTTC...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAACCCCCATCCTCCTGGTaGTCCAGCATCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKPPSSW*SSIHSR
Trigger: CCTGCTGTGGATGCTGGACCACCAGGAGGATGGGGG...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGTGGAGACAAAGTGCTaGGCTGACATCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKVETKC*ADITAW
Trigger: CCAGGCTGTGATGTCAGCCCAGCACTTTGTCTCCAC...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAGGCCTCCTTTTGCTGTaGCTCCTTGGTCAACAGATA +
Preference number: 4 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEGLLLL*LLGQQI
Trigger: TATCTGTTGACCAAGGAGCCACAGCAAAAGGAGGCC...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAACACTCCAGGGCACGTTaGGATATGTGCCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKHSRAR*DMCLPP
Trigger: AGGGGGCAGGCACATATCTCAACGTGCCCTGGAGTG...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAAAGTCTCGACCCATGTaGAGAATGAGGATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQKSRPM*RMRIQA
Trigger: GGCCTGGATCCTCATTCTGCACATGGGTCGAGACTT...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAGAATCTCTGCCTCAGTaGCCTGGTAGTAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLESLPQ*PGSKCP
Trigger: TGGACATTTACTACCAGGGCACTGAGGCAGAGATTC...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGTCATGTAGCTGTAGCTaGCGCTGGAGACATAGGCCA +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRSCSCS*RWRHRP
Trigger: TGGCCTATGTCTCCAGCGGCAGCTACAGCTACATGA...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGTCATGTAGCTGTAGCTaGCGCTGGAGACATAGGCCA +
Preference number: 4 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRSCSCS*RWRHRP
Trigger: TGGCCTATGTCTCCAGCGGCAGCTACAGCTACATGA...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGTCTGTGGAGACAAAGTaGTGGGCTGACATCACAGCC +
Preference number: 4 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRSVETK*WADITA
Trigger: GGCTGTGATGTCAGCCCAGCACTTTGTCTCCACAGA...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAACCACCTACTTGGTCCTaGCAGCCACCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKPPTWS*QPPPVV
Trigger: CACCACTGGAGGTGGCTGGCAGGACCAAGTAGGTGG...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTGCCATGAGCTTCTTCTaGTCCCAGTACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCAMSFF*SQYEVR
Trigger: CCTGACCTCGTACTGGGAGCAGAAGAAGCTCATGGC...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTACAGGTTTTCTCCTGTTaGAGAGAGAAGCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLQVFSC*REKPAS
Trigger: TGAAGCTGGCTTCTCTCTGCAACAGGAGAAAACCTG...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTGTGGAGACAAAGTGCTaGGCTGACATCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCVETKC*ADITAW
Trigger: CCAGGCTGTGATGTCAGCCCAGCACTTTGTCTCCAC...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCTACACCAAGAGCAGGTaGTCATTGAGCTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: HSLLAQILLWSASFGSRFYTKSR*SLSFWT
Trigger: TGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTA...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGTTTGTAAAGGCCACGTaGGATACTAAGCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: KATWDTKLGTFLCPGGTEFVKAT*DTKLGT
Trigger: GGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAA...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTTTTGTAAAGGCCACGTaGGATACTAAGCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGFVKAT*DTKLGT
Trigger: GGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAA...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAATTTCCAGGGCCCTTGTaGAATGAGAAGGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQFPGPL*NEKASH
Trigger: ATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAA...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CGCCACCCTCACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTATTGCTAGTTAAGGCCTaGGATGGCAGTGAATCACTG +
Preference number: 4 (lower is better)
Translates to: RHPHSHAHMRVECKSTTLLLVKA*DGSESL
Trigger: CAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAA...TAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTGAGGGTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGAACACCTGTCCTCTTaGAGAATTCACTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLEHLSS*RIHSRA
Trigger: TGCCCTGGAGTGAATTCTTCAAGAGGACAGGTGTTC...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAAGACAAAGTGCTGGGCTaGCATCACAGCCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKDKVLG*HHSLAD
Trigger: ATCCGCCAGGCTGTGATGTCAGCCCAGCACTTTGTC...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGACTCCCACGCTCACATaGGGGTTGAGTGTAAGTCTA +
Preference number: 4 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRTPTLT*GLSVSL
Trigger: TAGACTTACACTCAACCCTCATGTGAGCGTGGGAGT...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGCCTGGGATGGCAGTaGATCACTGGGTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKGLGWQ*ITGSLL
Trigger: TAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCC...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCATAACCCGCTACATCTaGATCGCCTTGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECITRYI*IALPQL
Trigger: GAGTTGGGGCAAGGCGATGCAGATGTAGCGGGTTAT...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGAATCACTGGGTCACTaGTACCAACTTGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKESLGH*YQLGKG
Trigger: TCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTC...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCATTTGCTGTGGCTCCTTaGTCAACAGATAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SLLAQILLWSASFGSRFAFAVAP*STDRES
Trigger: GCTTTCTCTATCTGTTGACCAAGGAGCCACAGCAAA...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTTTTGTAAAGGCCACGTaGGATACTAAGCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: STTLSHRECLKGPLQGWPFVKAT*DTKLGT
Trigger: GGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAA...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR TCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTACTTCCAGTTCTCTCTaGAAGACCTGGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCTSSSL*KTWTLS
Trigger: GGACAGTGTCCAGGTCTTTCAGAGAGAACTGGAAGT...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAGAATCTCTGCCTCAGTaGCCTGGTAGTAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQESLPQ*PGSKCP
Trigger: TGGACATTTACTACCAGGGCACTGAGGCAGAGATTC...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR GCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTAAGCCATAGGGAATaGCTCAAAGGGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECLSHRE*LKGPLQ
Trigger: CTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAG...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAAGCCCAGATCTTGCTCTaGTCAGCTTCCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKAQILL*SASFGS
Trigger: GCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGC...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR GCA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAAAGTTCCGAGTGGACATaGACGATCCCTGCACAGATG +
Preference number: 4 (lower is better)
Translates to: HMRVECKSTTLSHRECLKSSEWT*TIPAQM
Trigger: CATCTGTGCAGGGATCGTGCATGTCCACTCGGAACT...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCTACACCAAGAGCAGGTaGTCATTGAGCTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECYTKSR*SLSFWT
Trigger: TGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTA...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTATGGCAGTGAATCACTaGGTCACTGCTACCAACTTG +
Preference number: 4 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCMAVNH*VTATNL
Trigger: CAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCAT...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CCA 90 bp CACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCTTTGCTGTGGCTCCTTaGTCAACAGATAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HAHMRVECKSTTLSHRECFAVAP*STDRES
Trigger: GCTTTCTCTATCTGTTGACCAAGGAGCCACAGCAAA...GCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 90 bp CCGAGGCCCCACCGCCAGCCACAGCTCAGGCTCCGGGATGCGGCGTaGCCTGGCTCCGATGGGCCGGCGGCCGTCCACTCGCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: PRPHRQPQLRLRDAA*PGSDGPAAVHSHSQ
Trigger: CTGGCTGTGCGAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGCTGTGGCTGGCGGTGGGGCCTCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS CCA 90 bp GCCCCACCGCCAGCCACAGCTCAGGCTCCGGGATGCGGCGTGCCCTaGCTCCGATGGGCCGGCGGCCGTCCACTCGCACAGCCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: APPPATAQAPGCGVP*LRWAGGRPLAQPGP
Trigger: TGGGCCTGGCTGTGCGAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGCTGTGGCTGGCGGTGGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 90 bp AGGTCCCGGCGAGAGGCCAGCGTGGCAGCCCGATCCAGGCACGGCTaGAGCTGCTCCCAGGACAGGCGCCAGGAGGCCCGCCAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: RSRREASVAARSRHG*SCSQDRRQEARQAR
Trigger: GCGAGCCTGGCGGGCCTCCTGGCGCCTGTCCTGGGAGCAGCTGCAGCCGTGCCTGGATCGGGCTGCCACGCTGGCCTCTCGCCGGGACCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 90 bp CCAGCCACAGCTCAGGCTCCGGGATGCGGCGTGCCCTGGCTCCGATaGGCCGGCGGCCGTCCACTCGCACAGCCAGGCCCAGCACAGCCC +
Preference number: 5 (lower is better)
Translates to: PATAQAPGCGVPWLR*AGGRPLAQPGPAQP
Trigger: GGGCTGTGCTGGGCCTGGCTGTGCGAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGCTGTGGCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 90 bp CCCTCGCGGACAGCAGCCCAGATCAGCGGGCGCAGGCTGAGGTCCTaGCGGGCCTCCAGCACGTGCCGCGCCTTATGCAGGGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: PSRTAAQISGRRLRS*RASSTCRALCRAWR
Trigger: CCGCCAGGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCGGCAGGACCTCAGCCTGCGCCCGCTGATCTGGGCTGCTGTCCGCGAGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 90 bp GGTTGGCAGCTGGCCCGCTCCGCAAGCCCCCACGGCCCTCTGCCATaGAGCCCAGGACGTCCGCCACACAGGCCAGTGCCCGTGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GWQLARSASPHGPLP*SPGRPPHRPVPVPP
Trigger: TGGCGGCACGGGCACTGGCCTGTGTGGCGGACGTCCTGGGCTGCATGGCAGAGGGCCGTGGGGGCTTGCGGAGCGGGCCAGCTGCCAACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 90 bp CTCAGGGTTGGCAGCTGGCCCGCTCCGCAAGCCCCCACGGCCCTCTaGCATGCAGCCCAGGACGTCCGCCACACAGGCCAGTGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: LRVGSWPAPQAPTAL*HAAQDVRHTGQCPC
Trigger: GCACGGGCACTGGCCTGTGTGGCGGACGTCCTGGGCTGCATGGCAGAGGGCCGTGGGGGCTTGCGGAGCGGGCCAGCTGCCAACCCTGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 90 bp CGCAGGCTGAGGTCCTGCCGGGCCTCCAGCACGTGCCGCGCCTTATaGAGGGCCTGGCGGAAGAACAGGTCCCGGCGAGAGGCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: RRLRSCRASSTCRAL*RAWRKNRSRREASV
Trigger: CACGCTGGCCTCTCGCCGGGACCTGTTCTTCCGCCAGGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCGGCAGGACCTCAGCCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 90 bp CTCTGCCATGCAGCCCAGGACGTCCGCCACACAGGCCAGTGCCCGTaGCGCCACACCAGGGTCTCCTGCCCCAGCCTGGTCCAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: LCHAAQDVRHTGQCP*RHTRVSCPSLVQRG
Trigger: GCCACGCTGGACCAGGCTGGGGCAGGAGACCCTGGTGTGGCGGCACGGGCACTGGCCTGTGTGGCGGACGTCCTGGGCTGCATGGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS CCA 90 bp AGGTCCTGCCGGGCCTCCAGCACGTGCCGCGCCTTATGCAGGGCCTaGCGGAAGAACAGGTCCCGGCGAGAGGCCAGCGTGGCAGCCCGA +
Preference number: 5 (lower is better)
Translates to: RSCRASSTCRALCRA*RKNRSRREASVAAR
Trigger: TCGGGCTGCCACGCTGGCCTCTCGCCGGGACCTGTTCTTCCGCCAGGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCGGCAGGACCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 90 bp CAGATCAGCGGGCGCAGGCTGAGGTCCTGCCGGGCCTCCAGCACGTaGCGCGCCTTATGCAGGGCCTGGCGGAAGAACAGGTCCCGGCGA +
Preference number: 5 (lower is better)
Translates to: QISGRRLRSCRASST*RALCRAWRKNRSRR
Trigger: TCGCCGGGACCTGTTCTTCCGCCAGGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCGGCAGGACCTCAGCCTGCGCCCGCTGATCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS TCA 90 bp TGCCTGCCCCCTGTCTCTCCCAGCTGTCCAGACGGCCAACGAGGGTaGAGGCGTGGCCCGGGGAGCCGTGTAGCCGCGTGTGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: CLPPVSPSCPDGQRG*RRGPGSRVAACGVP
Trigger: AGGGACACCACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTCTGGACAGCTGGGAGAGACAGGGGGCAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
CDS GCA 90 bp GTGAAGGCGTGGCCCGGGGAGCCGTGTAGCCGCGTGTGGTGTCCCTaGAGGACAAGGTCACGCAGCTCCCGGCCATGCAGGGCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: VKAWPGEPCSRVWCP*RTRSRSSRPCRALE
Trigger: CTCCAAGGCCCTGCATGGCCGGGAGCTGCGTGACCTTGTCCTGCAGGGACACCACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 90 bp CCAACGAGGGTGAAGGCGTGGCCCGGGGAGCCGTGTAGCCGCGTGTaGTGTCCCTGCAGGACAAGGTCACGCAGCTCCCGGCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: PTRVKAWPGEPCSRV*CPCRTRSRSSRPCR
Trigger: CCTGCATGGCCGGGAGCTGCGTGACCTTGTCCTGCAGGGACACCACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS TCA 90 bp GGCAAGCGCCTCCACGCCCGCTGCCAGGTCTCCACACTCCAGGTATaGGAAGGGCCGCATCCACTCAGGGTTGGCAGCTGGCCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: GKRLHARCQVSTLQV*EGPHPLRVGSWPAP
Trigger: CGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGCGGCCCTTCTCATACCTGGAGTGTGGAGACCTGGCAGCGGGCGTGGAGGCGCTTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 90 bp GAGACAGCTGGACAGGCCGGGCTCCGGAGTCCAAGCCTAGGTAGGTaGAGGCATCCAGGGGCGGGCTCACGTGGGTGGCTAGGAGGCGCT +
Preference number: 5 (lower is better)
Translates to: ETAGQAGLRSPSLGR*RHPGAGSRGWLGGA
Trigger: AGCGCCTCCTAGCCACCCACGTGAGCCCGCCCCTGGATGCCTGCACCTACCTAGGCTTGGACTCCGGAGCCCGGCCTGTCCAGCTGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS CCA 90 bp CCCTGTCTCTCCCAGCTGTCCAGACGGCCAACGAGGGTGAAGGCGTaGCCCGGGGAGCCGTGTAGCCGCGTGTGGTGTCCCTGCAGGACA +
Preference number: 5 (lower is better)
Translates to: PCLSQLSRRPTRVKA*PGEPCSRVWCPCRT
Trigger: TGTCCTGCAGGGACACCACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTCTGGACAGCTGGGAGAGACAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
CDS CCA 90 bp GCCTCGCCCCCATCCTCCTGGTGGTCCAGCATCCACAGCAGGTCCTaGGGTCCCAGCTCCCTCGAGGGGTGGAGCACAGGAAAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ASPPSSWWSSIHSRS*GPSSLEGWSTGKRR
Trigger: CCGCCTCTTTCCTGTGCTCCACCCCTCGAGGGAGCTGGGACCCCAGGACCTGCTGTGGATGCTGGACCACCAGGAGGATGGGGGCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 90 bp CCCGTCTCTACAGTGGTGAGCACCTGCTCCAGGTGCAGCACTGCGTaGATCAGGGCTTCCGTGCCCACCACCCGGCCTGCGGCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: PVSTVVSTCSRCSTA*IRASVPTTRPAARC
Trigger: GCAGCGAGCCGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGTAGAGACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS CCA 90 bp AGTCAGGGCTCCCAGCTGTCCAGACGGCCAACGAGGGTGAAGGCGTaGCCCGGGGAGCCGTGTAGCCGCGTGTGGTGTCCCTGCAGGACA +
Preference number: 5 (lower is better)
Translates to: SQGSQLSRRPTRVKA*PGEPCSRVWCPCRT
Trigger: TGTCCTGCAGGGACACCACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTCTGGACAGCTGGGAGCCCTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS CCA 90 bp CTGCCAGCAGGTCCGGCCGCACCAGCCGGGTCGCGGGGCTCCCCTTaGAAGACCCAGGCCAAATGGACGCGGGAGCGTAGAAACACCTGT +
Preference number: 5 (lower is better)
Translates to: LPAGPAAPAGSRGSP*KTQAKWTRERRNTC
Trigger: ACAGGTGTTTCTACGCTCCCGCGTCCATTTGGCCTGGGTCTTCCAAGGGGAGCCCCGCGACCCGGCTGGTGCGGCCGGACCTGCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573352.5
CDS TCA 90 bp GAAGAAGCAGTCAGGGCTCCCAGCTGTCCAGACGGCCAACGAGGGTaGAGGCGTGGCCCGGGGAGCCGTGTAGCCGCGTGTGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: EEAVRAPSCPDGQRG*RRGPGSRVAACGVP
Trigger: AGGGACACCACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTCTGGACAGCTGGGAGCCCTGACTGCTTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS GCA 90 bp GGGGTGGAGCACAGGAAAGAGGCGGGCGCTGGGAAGGCAGTACTCTaGGGGCAGCGTCTCAGGGTCCCACAGGTCCCAGGCTCGAACACC +
Preference number: 5 (lower is better)
Translates to: GVEHRKEAGAGKAVL*GQRLRVPQVPGSNT
Trigger: GGTGTTCGAGCCTGGGACCTGTGGGACCCTGAGACGCTGCCCGCAGAGTACTGCCTTCCCAGCGCCCGCCTCTTTCCTGTGCTCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 90 bp GTCCCAGCTCCCTCGAGGGGTGGAGCACAGGAAAGAGGCGGGCGCTaGGAAGGCAGTACTCTGCGGGCAGCGTCTCAGGGTCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: VPAPSRGGAQERGGR*EGSTLRAASQGPTG
Trigger: ACCTGTGGGACCCTGAGACGCTGCCCGCAGAGTACTGCCTTCCCAGCGCCCGCCTCTTTCCTGTGCTCCACCCCTCGAGGGAGCTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 90 bp GGTCTCCACACTCCAGGTATGAGAAGGGCCGCATCCACTCAGGGTTaGCAGCTGGCCCGCTCCGCAAGCCCCCACGGCCCTCTGCCATGC +
Preference number: 5 (lower is better)
Translates to: GLHTPGMRRAASTQG*QLARSASPHGPLPC
Trigger: GCATGGCAGAGGGCCGTGGGGGCTTGCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGCGGCCCTTCTCATACCTGGAGTGTGGAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS-3UTR CAA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGCGCATCCACTCAGGGTaGGCAGCTGGCCCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQRIHSG*AAGPLR
Trigger: GCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGCG...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 90 bp CAGGCTCACCAGGATTTGCAGGAACAGACAGCAGCATGTCGGTGCTaGAGACCCACACGCCTGGCGGGGAGCCCGGGCCCAGCCGATAGG +
Preference number: 5 (lower is better)
Translates to: QAHQDLQEQTAACRC*RPTRLAGSPGPADR
Trigger: CCTATCGGCTGGGCCCGGGCTCCCCGCCAGGCGTGTGGGTCTGCAGCACCGACATGCTGCTGTCTGTTCCTGCAAATCCTGGTGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS CCA 90 bp TCCAGCATCCACAGCAGGTCCTGGGGTCCCAGCTCCCTCGAGGGGTaGAGCACAGGAAAGAGGCGGGCGCTGGGAAGGCAGTACTCTGCG +
Preference number: 5 (lower is better)
Translates to: SSIHSRSWGPSSLEG*STGKRRALGRQYSA
Trigger: CGCAGAGTACTGCCTTCCCAGCGCCCGCCTCTTTCCTGTGCTCCACCCCTCGAGGGAGCTGGGACCCCAGGACCTGCTGTGGATGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 90 bp AGTCACATACCAGTGGTGAGCACCTGCTCCAGGTGCAGCACTGCGTaGATCAGGGCTTCCGTGCCCACCACCCGGCCTGCGGCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: SHIPVVSTCSRCSTA*IRASVPTTRPAARC
Trigger: GCAGCGAGCCGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGGTATGTGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573832.1
CDS GCA 90 bp CGCGTGTGGTGTCCCTGCAGGACAAGGTCACGCAGCTCCCGGCCATaGAGGGCCTTGGAGTGGGCTGTATCCAGGCCAGTCACCAAGCAG +
Preference number: 5 (lower is better)
Translates to: RVWCPCRTRSRSSRP*RALEWAVSRPVTKQ
Trigger: CTGCTTGGTGACTGGCCTGGATACAGCCCACTCCAAGGCCCTGCATGGCCGGGAGCTGCGTGACCTTGTCCTGCAGGGACACCACACGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 90 bp GGGCACTCAGCCACCACCCACTGCCCAGGTCCCGGCAGTTCCACCTaGTCTGTGGAGACAAAGTGCTGGGCTGACATCACAGCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GHSATTHCPGPGSST*SVETKCWADITAWR
Trigger: CCGCCAGGCTGTGATGTCAGCCCAGCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTGAGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 90 bp CCCCCAGAGAAATCCACACGGGCCGGGCACTCAGCCACCACCCACTaGCCAGGTCCCGGCAGTTCCACCTGCTCTGTGGAGACAAAGTGC +
Preference number: 5 (lower is better)
Translates to: PPEKSTRAGHSATTH*PGPGSSTCSVETKC
Trigger: GCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTGAGTGCCCGGCCCGTGTGGATTTCTCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 90 bp AGGTCAGCCAGGCACCGGCACACTATCTTCACAGTCATCTCATCCTaGCGAGGCCCCACCGCCAGCCACAGCTCAGGCTCCGGGATGCGG +
Preference number: 5 (lower is better)
Translates to: RSARHRHTIFTVISS*RGPTASHSSGSGMR
Trigger: CCGCATCCCGGAGCCTGAGCTGTGGCTGGCGGTGGGGCCTCGGCAGGATGAGATGACTGTGAAGATAGTGTGCCGGTGCCTGGCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 90 bp TCTCAGGCTCACCAGGATTTGCAGGAACAGACAGCAGCATGTCGGTaGTGCAGACCCACACGCCTGGCGGGGAGCCCGGGCCCAGCCGAT +
Preference number: 5 (lower is better)
Translates to: SQAHQDLQEQTAACR*CRPTRLAGSPGPAD
Trigger: ATCGGCTGGGCCCGGGCTCCCCGCCAGGCGTGTGGGTCTGCAGCACCGACATGCTGCTGTCTGTTCCTGCAAATCCTGGTGAGCCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS TCA 90 bp GGACGAGGCACCACGGGCCACCACCCAGCCTCACCCGATAGGTCATaGTGTCCAGCAGGCAGTCCAGGTTGCAGACCAAGGCTTCCACGG +
Preference number: 5 (lower is better)
Translates to: GRGTTGHHPASPDRS*CPAGSPGCRPRLPR
Trigger: CCGTGGAAGCCTTGGTCTGCAACCTGGACTGCCTGCTGGACATCATGACCTATCGGGTGAGGCTGGGTGGTGGCCCGTGGTGCCTCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576107.5
CDS GCA 90 bp GCTGCTGGTGCTCAGCTGGAGTTCCGAGTGGACATGCACGATCCCTaGACAGATGAAGGCCGCCTTCAGCAGGGCCCCTGGGGCATGAGG +
Preference number: 5 (lower is better)
Translates to: AAGAQLEFRVDMHDP*TDEGRLQQGPWGMR
Trigger: CCTCATGCCCCAGGGGCCCTGCTGAAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCTGAGCACCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS GCA 90 bp CAACTCCAGGGCAGTCACATACCAGTGGTGAGCACCTGCTCCAGGTaGAGCACTGCGTGGATCAGGGCTTCCGTGCCCACCACCCGGCCT +
Preference number: 5 (lower is better)
Translates to: QLQGSHIPVVSTCSR*STAWIRASVPTTRP
Trigger: AGGCCGGGTGGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGGTATGTGACTGCCCTGGAGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573832.1
CDS CCA 90 bp CCAAGCCTAGGTAGGTGCAGGCATCCAGGGGCGGGCTCACGTGGGTaGCTAGGAGGCGCTCGGCAGTCTCCACAGAGAAGAAGACAACCC +
Preference number: 5 (lower is better)
Translates to: PSLGRCRHPGAGSRG*LGGARQSPQRRRQP
Trigger: GGGTTGTCTTCTTCTCTGTGGAGACTGCCGAGCGCCTCCTAGCCACCCACGTGAGCCCGCCCCTGGATGCCTGCACCTACCTAGGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571487.5
ENST00000571514.5
CDS-3UTR CAA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCGCATCCACTCAGGGTaGGCAGCTGGCCCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: GMAVNHWVTATNLARDRHRIHSG*AAGPLR
Trigger: GCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGCG...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGGGCCTGCTTAGCCACTaGTCCCTCTCCTGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQGLLSH*SLSWAS
Trigger: GCTTGCCCAGGAGAGGGACAAGTGGCTAAGCAGGCC...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GCTCCTCAGCACATCCTGCAGCAGGTTCCGAGCCAGGCGGGTCTTGCCAGTGTACGGGAGCGCCCCACCTaGATGCCAGGCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: APQHILQQVPSQAGLASVRERPT*MPGIRP
Trigger: TGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCG...TACACTGGCAAGACCCGCCTGGCTCGGAACCTGCTGCAGGATGTGCTGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CAA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGCGAGCCAGGCGGGTCTaGCCAGTGTACACCAAGAGC +
Preference number: 5 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQRARRV*PVYTKS
Trigger: GCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCG...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GGAACAGAGGCTACATCTAGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCCAAGGCCCTCGGTCTaGGCCAGCACCGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GTEATSRPLSTRSQSCPRPRPSV*ASTASK
Trigger: CTTGGAGGCGGTGCTGGCCAAGACCGAGGGCCTTGG...CCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCTAGATGTAGCCTCTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp CCCAGGAGCCCCGGGGAGTGTGAGGCTGAGCAGGAACTCACTGGCTaGGGAGGTCATGTAGCTGTAGCTGCCGCTGGAGACATAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRSPGECEAEQELTG*GGHVAVAAAGDIGW
Trigger: CCAGCCTATGTCTCCAGCGGCAGCTACAGCTACATGACCTCCTCAGCCAGTGAGTTCCTGCTCAGCCTCACACTCCCCGGGGCTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571514.5
CDS GCA 90 bp CAGCTGCTCACTCAGCTGGAGTTCCGAGTGGACATGCACGATCCCTaGACAGATGAAGGCCGCCTTCAGCAGGGCCCCTGGGGCATGAGG +
Preference number: 5 (lower is better)
Translates to: QLLTQLEFRVDMHDP*TDEGRLQQGPWGMR
Trigger: CCTCATGCCCCAGGGGCCCTGCTGAAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 90 bp GACCAGGTGTGCAGCTCAAAGCCGCCCCCGAAGGTGCGGAGCAGCTaGTCACTCAGCTGGAGTTCCGAGTGGACATGCACGATCCCTGCA +
Preference number: 5 (lower is better)
Translates to: DQVCSSKPPPKVRSS*SLSWSSEWTCTIPA
Trigger: TGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCTGCTCCGCACCTTCGGGGGCGGCTTTGAGCTGCACACCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 90 bp GACCTCCTCCAACTCCAGGGCAGTCACATACCAGTGGTGAGCACCTaGTCCAGGTGCAGCACTGCGTGGATCAGGGCTTCCGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: DLLQLQGSHIPVVST*SRCSTAWIRASVPT
Trigger: GGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGGTATGTGACTGCCCTGGAGTTGGAGGAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573832.1
CDS CCA 90 bp CAGCCACCACCCACTGCCCAGGTCCCGGCAGTTCCACCTGCTCTGTaGAGACAAAGTGCTGGGCTGACATCACAGCCTGGCGGATCAGGA +
Preference number: 5 (lower is better)
Translates to: QPPPTAQVPAVPPAL*RQSAGLTSQPGGSG
Trigger: TCCTGATCCGCCAGGCTGTGATGTCAGCCCAGCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS CCA 90 bp CCCCCGAAGGTGCGGAGCAGCTGCTCACTCAGCTGGAGTTCCGAGTaGACATGCACGATCCCTGCACAGATGAAGGCCGCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PPKVRSSCSLSWSSE*TCTIPAQMKAAFSR
Trigger: CCTGCTGAAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCTGCTCCGCACCTTCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS CCA 90 bp GATCCAGGCCGAGTGCAGGACATCGGATGTGACCACCTGCAGGAGTaGGAAAGCCCTGTGAACAGAGGCCTCAGGCAGACGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: DPGRVQDIGCDHLQE*ESPVNRGLRQTPWR
Trigger: CCTCCAGGGCGTCTGCCTGAGGCCTCTGTTCACAGGGCTTTCCCACTCCTGCAGGTGGTCACATCCGATGTCCTGCACTCGGCCTGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS-3UTR CAA 90 bp AGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCGCATCCACTCAGGGTaGGCAGCTGGCCCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: SESLGHCYQLGKGPPPSLRIHSG*AAGPLR
Trigger: GCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGCG...GAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TTCTACCTCCACCTTCAGTGGCAGCTGAGCCCGGGAGCGCCCCACCTTGATGCCCAGAGGCAGGCTTCCTaGGCGGAAGCCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: FYLHLQWQLSPGAPHLDAQRQAS*AEAFST
Trigger: TGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTG...GGCATCAAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CAA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCCAAGGCCCTCGGTCTaGGCCAGCACCGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VHQVTVLSQALSACPDLAPRPSV*ASTASK
Trigger: CTTGGAGGCGGTGCTGGCCAAGACCGAGGGCCTTGG...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp CCCAGGAGCCCCGGGGAGTGTGAGGCTGAGCAGGAACTCACTGGCTaGGGAGGTCATGTAGCTGTAGCTGCCGCTGGAGACATAGGCCAT +
Preference number: 5 (lower is better)
Translates to: PRSPGECEAEQELTG*GGHVAVAAAGDIGH
Trigger: ATGGCCTATGTCTCCAGCGGCAGCTACAGCTACATGACCTCCTCAGCCAGTGAGTTCCTGCTCAGCCTCACACTCCCCGGGGCTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS GCA 90 bp TACTGGCAGGTCAGGATGATGACTGTCCAATCAACTCCCTTCGGCTaGTCCATTCTGGCCAAGCGGAGGGGCTTCCTGCCGTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: YWQVRMMTVQSTPFG*SILAKRRGFLPSPG
Trigger: GCCGGGCGACGGCAGGAAGCCCCTCCGCTTGGCCAGAATGGAGCAGCCGAAGGGAGTTGATTGGACAGTCATCATCCTGACCTGCCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571487.5
ENST00000576107.5
CDS GCA 90 bp AAGGTGCGGAGCAGCTGCTCACTCAGCTGGAGTTCCGAGTGGACATaGACGATCCCTGCACAGATGAAGGCCGCCTTCAGCAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: KVRSSCSLSWSSEWT*TIPAQMKAAFSRAP
Trigger: AGGGGCCCTGCTGAAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCTGCTCCGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 90 bp GAGCGCCCCACCTTGATGCCAGGCATTAGGCCACCTACTTGGTCCTaGCAGCCACCTCCTGTGAGCCCAGGGACTGTCACTGTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: ERPTLMPGIRPPTWS*QPPPVSPGTVTVGV
Trigger: GACTCCAACAGTGACAGTCCCTGGGCTCACAGGAGGTGGCTGGCAGGACCAAGTAGGTGGCCTAATGCCTGGCATCAAGGTGGGGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CCA 90 bp TTGGTCCTGCCAGCCACCTCCTGTGAGCCCAGGGACTGTCACTGTTaGAGTCTATCTGGCCCAGCTTCACTCTCCCAGCCTAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: LVLPATSCEPRDCHC*SLSGPASLSQPRLP
Trigger: CGGGAGCCTAGGCTGGGAGAGTGAAGCTGGGCCAGATAGACTCCAACAGTGACAGTCCCTGGGCTCACAGGAGGTGGCTGGCAGGACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS-3UTR CAA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCGGGAGCGCCCCACCTaGATGCCAGGCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: VHQVTVLSQALSACPDLARERPT*MPGIRP
Trigger: TGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCG...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCACCAAGGCCCTCGGTCTaGGCCAGCACCGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPPRPSV*ASTASK
Trigger: CTTGGAGGCGGTGCTGGCCAAGACCGAGGGCCTTGG...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCAGTCACTGCTACCAACTaGGCAAGGGACCGCCACCCT +
Preference number: 5 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSVTATN*ARDRHP
Trigger: AGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGAC...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp GTGTCAGTGACCTCCTCCAACTCCAGGGCAGTCACATACCAGTGGTaGGCACCTGCTCCAGGTGCAGCACTGCGTGGATCAGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: VSVTSSNSRAVTYQW*APAPGAALRGSGLP
Trigger: CGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGGTATGTGACTGCCCTGGAGTTGGAGGAGGTCACTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573832.1
CDS GCA 90 bp GGAAGCCCCTCACCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCATTCTGCACCACAGCAGGAAGTCGG +
Preference number: 5 (lower is better)
Translates to: GSPSPWRKPSAHSSV*RTRLWAFCTTAGSR
Trigger: CCGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGTGAGGGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS GCA 90 bp TACTGGCAGGTCAGGATGATGACTGTCCAATCAACTCCCTTCGGCTaGTCCATTCTGGCCAAGCGGAGGGGCTTCCTGTGGGCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: YWQVRMMTVQSTPFG*SILAKRRGFLWAPG
Trigger: CCCGGGAGCCCACAGGAAGCCCCTCCGCTTGGCCAGAATGGAGCAGCCGAAGGGAGTTGATTGGACAGTCATCATCCTGACCTGCCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576453.1
CDS CCA 90 bp CAGCTTCACTCTCCCAGCCTAGGCTCCCGGCCCTGCACCCCTTGCTaGGACCAGTGTGGAAAGATAGCTTCCCTCAACTCCACAGGACAG +
Preference number: 5 (lower is better)
Translates to: QLHSPSLGSRPCTPC*DQCGKIASLNSTGQ
Trigger: CTGTCCTGTGGAGTTGAGGGAAGCTATCTTTCCACACTGGTCCCAGCAAGGGGTGCAGGGCCGGGAGCCTAGGCTGGGAGAGTGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CCA 90 bp CATAGATCATACCTGGGGGAACAGTGGGAGGGAAGTGGCTCTATCTaGGACGAGGCACCACGGGCCACCACCCAGCCTCACCCGATAGGT +
Preference number: 5 (lower is better)
Translates to: HRSYLGEQWEGSGSI*DEAPRATTQPHPIG
Trigger: ACCTATCGGGTGAGGCTGGGTGGTGGCCCGTGGTGCCTCGTCCCAGATAGAGCCACTTCCCTCCCACTGTTCCCCCAGGTATGATCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576107.5
CDS CCA 90 bp TCCTTCTCCCAGCTGAGCCAGCATAGATCATACCTGGGGGAACAGTaGGAGGGAAGTGGCTCTATCTGGGACGAGGCACCACGGGCCACC +
Preference number: 5 (lower is better)
Translates to: SFSQLSQHRSYLGEQ*EGSGSIWDEAPRAT
Trigger: GGTGGCCCGTGGTGCCTCGTCCCAGATAGAGCCACTTCCCTCCCACTGTTCCCCCAGGTATGATCTATGCTGGCTCAGCTGGGAGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576107.5
CDS-3UTR CAA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGCGGGAGCGCCCCACCTaGATGCCAGGCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGRERPT*MPGIRP
Trigger: TGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCG...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp AGAGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGTACCCGAGCCAGGCGGGTCTaGCCAGTGTACACCAAGAGC +
Preference number: 5 (lower is better)
Translates to: RGRLPWRKPSAHSSVCRTRARRV*PVYTKS
Trigger: GCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCG...GGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CAA 90 bp TACACCAAGAGCAGGTGGTCATTGAGCTTCTGGACAAAGCCCTCAGGCACCGTGCCAAGGCCCTCGGTCTaGGCCAGCACCGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: YTKSRWSLSFWTKPSGTVPRPSV*ASTASK
Trigger: CTTGGAGGCGGTGCTGGCCAAGACCGAGGGCCTTGG...CACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTTGGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CAA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACGGAAAGGGCAACAGGTaGAGGCCTCGGTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GMAVNHWVTATNLARDRHGKGNR*RPRSPA
Trigger: TGCTGGGGACCGAGGCCTCAACCTGTTGCCCTTTCC...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACCAGGCACTCTCTGCTaGCCCAGATCTTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSPGTLC*PRSCSG
Trigger: ACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp AGGTCCCGGCAGTTCCACCTGCTCTGTGGAGACAAAGTGCTGGGCTaGCATCACAGCCTGGCGGATCAGGATCTGACCAGCCCCCTCATA +
Preference number: 5 (lower is better)
Translates to: RSRQFHLLCGDKVLG*HHSLADQDLTSPLI
Trigger: TATGAGGGGGCTGGTCAGATCCTGATCCGCCAGGCTGTGATGTCAGCCCAGCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp TGCCAGGCATTAGGCCACCTACTTGGTCCTGCCAGCCACCTCCTGTaGGCCCAGGGACTGTCACTGTTGGAGTCTATCTGGCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CQALGHLLGPASHLL*AQGLSLLESIWPSF
Trigger: GAAGCTGGGCCAGATAGACTCCAACAGTGACAGTCCCTGGGCTCACAGGAGGTGGCTGGCAGGACCAAGTAGGTGGCCTAATGCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS GCA 90 bp GACCAGTGGCACCCGCCCATCAGGCCTGACACACCGCTGAATCTCTaGCTCAGTGCCCTGGTAGTAAATGTCCAAAACAAGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: DQWHPPIRPDTPLNL*LSALVVNVQNKALG
Trigger: CCCCAGGGCCTTGTTTTGGACATTTACTACCAGGGCACTGAGGCAGAGATTCAGCGGTGTGTCAGGCCTGATGGGCGGGTGCCACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
CDS GCA 90 bp CCAAGGCACGGATTTCCCCACCAGGTGGAAGCAAGAGCCCAGGGCTaGGGCACCTGGGCACCTCTAAAAGGGAAATACGGTTTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: PRHGFPHQVEARAQG*GTWAPLKGKYGFQA
Trigger: GGCTTGGAAACCGTATTTCCCTTTTAGAGGTGCCCAGGTGCCGCAGCCCTGGGCTCTTGCTTCCACCTGGTGGGGAAATCCGTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS GCA 90 bp GACGTGCTGCTGAGCCAGTGTCATGGTAAAGAAGCCGGATTCCAGTaGCGGCTGGAGCCAGGAGTAACCCACTTCCCAGGACTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: DVLLSQCHGKEAGFQ*RLEPGVTHFPGLPE
Trigger: CTCAGGCAGTCCTGGGAAGTGGGTTACTCCTGGCTCCAGCCGGCACTGGAATCCGGCTTCTTTACCATGACACTGGCTCAGCAGCACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS CCA 90 bp TCCCAGCCTAGGCTCCCGGCCCTGCACCCCTTGCTGGGACCAGTGTaGAAAGATAGCTTCCCTCAACTCCACAGGACAGTGAGCTATGCA +
Preference number: 5 (lower is better)
Translates to: SQPRLPALHPLLGPV*KDSFPQLHRTVSYA
Trigger: TGCATAGCTCACTGTCCTGTGGAGTTGAGGGAAGCTATCTTTCCACACTGGTCCCAGCAAGGGGTGCAGGGCCGGGAGCCTAGGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CCA 90 bp AATTCACTCCAGGGCACGTTGAGATATGTGCCTGCCCCCTGTCTCTaGGGGAGAGGAAGAAGCAGTCAGGGCTCCCAGCTGTCCAGACGG +
Preference number: 5 (lower is better)
Translates to: NSLQGTLRYVPAPCL*GRGRSSQGSQLSRR
Trigger: CCGTCTGGACAGCTGGGAGCCCTGACTGCTTCTTCCTCTCCCCCAGAGACAGGGGGCAGGCACATATCTCAACGTGCCCTGGAGTGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS-3UTR CAA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGCGGGAGCGCCCCACCTaGATGCCAGGCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWRERPT*MPGIRP
Trigger: TGGCCTAATGCCTGGCATCAAGGTGGGGCGCTCCCG...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGAAGAGCAGGTGGTCATaGAGCTTCTGGACAAAGCCC +
Preference number: 5 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQKSRWS*SFWTKP
Trigger: GGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTT...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGCGAGCCAGGCGGGTCTaGCCAGTGTACACCAAGAGC +
Preference number: 5 (lower is better)
Translates to: QALSACPDLALVSFLWEQRARRV*PVYTKS
Trigger: GCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCG...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GGGATGGCAGTGAATCACTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GMAVNHWVTATNLARDRHSTLLS*PYQAVG
Trigger: GCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCT...GTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAGTGATTCACTGCCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp AGGCAGGCTTCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTGCCGTACCAGAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: RQASLAEAFSTLLSLPYQSTLLS*PYQAVG
Trigger: GCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCT...CTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CAA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCAGAGGCAGGCTTCCTaGGCGGAAGCCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: VHQVTVLSQALSACPDLAQRQAS*AEAFST
Trigger: TGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTG...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GCCAGGACATCCATCATACGCCGCACAGTCAGGGGCTCACAGCCTGGAGCCATGCTCCAAGGCCTCCTTTaGCTGTGGCTCCTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: ARTSIIRRTVRGSQPGAMLQGLL*LWLLGQ
Trigger: TTGACCAAGGAGCCACAGCAAAAGGAGGCCTTGGAG...CATGGCTCCAGGCTGTGAGCCCCTGACTGTGCGGCGTATGATGGATGTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CAA 90 bp CCTTCAGCACACTCCTCAGTTTGCCGTACCAGGCTGTGGGCATTCTGCACCACAGGAAAGGGCAACAGGTaGAGGCCTCGGTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PSAHSSVCRTRLWAFCTTGKGNR*RPRSPA
Trigger: TGCTGGGGACCGAGGCCTCAACCTGTTGCCCTTTCC...TGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CAA 90 bp AGGCCCCTGTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGGCACGCTCCGTAGTTTaGCTAGTTAAGGCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: RPLSTRSQSCPRHSLLAQARSVV*LVKAWD
Trigger: ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC...CTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGACAGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 90 bp AAGGGGAAGTCTCGACCCATGTGCAGAATGAGGATCCAGGCCGAGTaGAGGACATCGGATGTGACCACCTGCAGGAGTGGGAAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: KGKSRPMCRMRIQAE*RTSDVTTCRSGKAL
Trigger: CAGGGCTTTCCCACTCCTGCAGGTGGTCACATCCGATGTCCTGCACTCGGCCTGGATCCTCATTCTGCACATGGGTCGAGACTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS GCA 90 bp CATAGTCGGCATCTAGGGAGCTGTGAAGCCACACACTGGGGACCCTaGCCAGCTCAGACTTCCTTGGAACTCAGCCATGGGTTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: HSRHLGSCEATHWGP*PAQTSLELSHGLSP
Trigger: GGGACTCAACCCATGGCTGAGTTCCAAGGAAGTCTGAGCTGGGCAGGGTCCCCAGTGTGTGGCTTCACAGCTCCCTAGATGCCGACTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS-3UTR CAA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGAGGAAAGGGCAACAGGTaGAGGCCTCGGTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GPLWNEKASHRICKGHVGGKGNR*RPRSPA
Trigger: TGCTGGGGACCGAGGCCTCAACCTGTTGCCCTTTCC...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CTGGGTCACTGCTACCAACTTGGCAAGGGACCGCCACCCTCACTCCCACGCTCACGTGGGATACTAAGCTaGGGACCTTCCTATGTCCAG +
Preference number: 5 (lower is better)
Translates to: LGHCYQLGKGPPPSLPRSRGILS*GPSYVQ
Trigger: CTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACG...TGAGCGTGGGAGTGAGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGCCCTTTCCAGGGCCCTaGTGGAATGAGAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGPFPGP*WNEKAS
Trigger: GCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGG...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCAGAGGTGGGGTCACTGCTACCAACTaGGCAAGGGACCGCCACCCT +
Preference number: 5 (lower is better)
Translates to: CPDLALVSFLWEQIRRGGVTATN*ARDRHP
Trigger: AGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGAC...CCCACCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp CAGAAGGGGCAGGGCTGCTTCTGTCCATCCTATAGACAGACAGACTaGGGCACAGCAGGAGAAGCCCTGCCTCCACCAGGCTTCATTCTC +
Preference number: 5 (lower is better)
Translates to: QKGQGCFCPSYRQTD*GTAGEALPPPGFIL
Trigger: GAGAATGAAGCCTGGTGGAGGCAGGGCTTCTCCTGCTGTGCCTCAGTCTGTCTGTCTATAGGATGGACAGAAGCAGCCCTGCCCCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS GCA 90 bp CACTGGTGCCACTGCCACGGAGGAAACTCCTTGGATTCAGGAACATaGGAGGAAATCCAGGATGAGAGGCTGCCCACTGACAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: HWCHCHGGNSLDSGT*EEIQDERLPTDREE
Trigger: CTCCTCCCTGTCAGTGGGCAGCCTCTCATCCTGGATTTCCTCGCATGTTCCTGAATCCAAGGAGTTTCCTCCGTGGCAGTGGCACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571487.5
CDS CCA 90 bp GCAGAGGGGAGTGACGTGCCTGGGCCAAGATACTCAGCACCCATCTaGAGATTGCATGAAGTGCCAAGACGTGCTGCTGAGCCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: AEGSDVPGPRYSAPI*RLHEVPRRAAEPVS
Trigger: TGACACTGGCTCAGCAGCACGTCTTGGCACTTCATGCAATCTCCAGATGGGTGCTGAGTATCTTGGCCCAGGCACGTCACTCCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS-3UTR CAA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAGGCCTGCTTAGCCACTaGTCCCTCTCCTGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEGLLSH*SLSWAS
Trigger: GCTTGCCCAGGAGAGGGACAAGTGGCTAAGCAGGCC...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWSTLLS*PYQAVG
Trigger: GCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCT...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATCAGAGGCAGGCTTCCTaGGCGGAAGCCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDQRQAS*AEAFST
Trigger: TGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTG...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GTCCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTCCAAGGCCTCCTTTaGCTGTGGCTCCTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: VHQVTVLSQALSACPDLALQGLL*LWLLGQ
Trigger: TTGACCAAGGAGCCACAGCAAAAGGAGGCCTTGGAG...AGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GCCTTGCTAAGGGACTCCCAGCCATATGCCAAGGCTGGCTGTCAACCCTTTCCACAGGCACCAGGTCACTaGGCACGCTCCGTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: ALLRDSQPYAKAGCQPFPQAPGH*ARSVVL
Trigger: CAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG...TGGAAAGGGTTGACAGCCAGCCTTGGCATATGGCTGGGAGTCCCTTAGCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp AGAAGAAGACAACCCCAGAGACCAGTGGCACCCGCCCATCAGGCCTaGCACACCGCTGAATCTCTGCCTCAGTGCCCTGGTAGTAAATGT +
Preference number: 5 (lower is better)
Translates to: RRRQPQRPVAPAHQA*HTAESLPQCPGSKC
Trigger: ACATTTACTACCAGGGCACTGAGGCAGAGATTCAGCGGTGTGTCAGGCCTGATGGGCGGGTGCCACTGGTCTCTGGGGTTGTCTTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571487.5
CDS GCA 90 bp TGTCCTCTTGAAGAATTCACTCCAGGGCACGTTGAGATATGTGCCTaGCCCCTGTCTCTGGGGGAGAGGAAGAAGCAGTCAGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: CPLEEFTPGHVEICA*PLSLGERKKQSGLP
Trigger: TGGGAGCCCTGACTGCTTCTTCCTCTCCCCCAGAGACAGGGGGCAGGCACATATCTCAACGTGCCCTGGAGTGAATTCTTCAAGAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS GCA 90 bp GACCAGTGGCACCCGCCCATCAGGCCTGACACACCGCTGAATCTCTaGCTCAGTGCCCTGGTAGTAAATGTCCAAAACAAGGCCCTATGT +
Preference number: 5 (lower is better)
Translates to: DQWHPPIRPDTPLNL*LSALVVNVQNKALC
Trigger: ACATAGGGCCTTGTTTTGGACATTTACTACCAGGGCACTGAGGCAGAGATTCAGCGGTGTGTCAGGCCTGATGGGCGGGTGCCACTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571487.5
CDS-3UTR CAA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATACATCTGCATCGCCTaGCCCCAACTCTGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: GHLARSVVLLVKAWDGSEYICIA*PQLWGP
Trigger: AGGCCCCCAGAGTTGGGGCAAGGCGATGCAGATGTA...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CAA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCATACATCTGCATCGCCTaGCCCCAACTCTGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: SLLAQILLWSASFGSRFAYICIA*PQLWGP
Trigger: AGGCCCCCAGAGTTGGGGCAAGGCGATGCAGATGTA...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CAA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTCCAGGGCACGTaGAGATATGTGCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: GHLARSVVLLVKAWDGSESLQGT*RYVPAP
Trigger: GGGGGCAGGCACATATCTCAACGTGCCCTGGAGTGA...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CCACCAGGTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTAAGAGCAGGTGGTCATaGAGCTTCTGGACAAAGCCC +
Preference number: 5 (lower is better)
Translates to: PPGHSPVPGTLCLPRSCSKSRWS*SFWTKP
Trigger: GGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTT...AGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGACCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TTCTGCACCACAGCAGGAAGTCGGGCATACCAGCTCCTCAGCACATCCTGCAGCAAGAGCAGGTGGTCATaGAGCTTCTGGACAAAGCCC +
Preference number: 5 (lower is better)
Translates to: FCTTAGSRAYQLLSTSCSKSRWS*SFWTKP
Trigger: GGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTT...GCTGCAGGATGTGCTGAGGAGCTGGTATGCCCGACTTCCTGCTGTGGTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS-3UTR CAA 90 bp AAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: KATWDTKLGTFLCPGGTESTLLS*PYQAVG
Trigger: GCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCT...CTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGCTCCAAGGCCTCCTTTaGCTGTGGCTCCTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: QALSACPDLALVSFLWEQLQGLL*LWLLGQ
Trigger: TTGACCAAGGAGCCACAGCAAAAGGAGGCCTTGGAG...CTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCCTGCTTGCCCAGATCTaGCTCTGGTCAGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: VTVLSQALSACPDLALVSLLAQI*LWSASF
Trigger: AAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAG...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GTCACAGTCCTGTCCCAGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCCGTGGGATACTAAGCTaGGGACCTTCCTATGTCCAG +
Preference number: 5 (lower is better)
Translates to: VTVLSQALSACPDLALVSRGILS*GPSYVQ
Trigger: CTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACG...GCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGGGACAGGACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCACCCTTTCCAGGGCCCTaGTGGAATGAGAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SLLAQILLWSASFGSRFAPFPGP*WNEKAS
Trigger: GCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGG...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGTCTTCAGGGTTGGCCTaGCTAAGGGACTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: QGPCGMRRPAIGFVKATWSSGLA*LRDSQP
Trigger: TGGCTGGGAGTCCCTTAGCAAGGCCAACCCTGAAGA...CCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp AGGCACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATCTTCAGGGTTGGCCTaGCTAAGGGACTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RHSLLAQILLWSASFGSRSSGLA*LRDSQP
Trigger: TGGCTGGGAGTCCCTTAGCAAGGCCAACCCTGAAGA...TCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 90 bp TACTGGCAGGTCAGGATGATGACTGTCCAATCAACTCCCTTCGGCTaGTCCATTCTGGCCAAGCGGAGGGGCTTCCTGGGTCTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: YWQVRMMTVQSTPFG*SILAKRRGFLGLLD
Trigger: ATCCAAAAGACCCAGGAAGCCCCTCCGCTTGGCCAGAATGGAGCAGCCGAAGGGAGTTGATTGGACAGTCATCATCCTGACCTGCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574784.5
CDS GCA 90 bp TACTGGCAGGTCAGGATGATGACTGTCCAATCAACTCCCTTCGGCTaGTCCATTCTGGCCAAGCGGAGGGGCTTCGTCTATAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: YWQVRMMTVQSTPFG*SILAKRRGFVYNPS
Trigger: GCTGGGATTATAGACGAAGCCCCTCCGCTTGGCCAGAATGGAGCAGCCGAAGGGAGTTGATTGGACAGTCATCATCCTGACCTGCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572784.5
CDS CCA 90 bp GAGAATGACAACCCTCCTCTCCCAAAGTTCTTCCGCAGAGCCCTGTaGGACAGAAGGGGCAGGGCTGCTTCTGTCCATCCTATAGACAGA +
Preference number: 5 (lower is better)
Translates to: ENDNPPLPKFFRRAL*DRRGRAASVHPIDR
Trigger: TCTGTCTATAGGATGGACAGAAGCAGCCCTGCCCCTTCTGTCCCACAGGGCTCTGCGGAAGAACTTTGGGAGAGGAGGGTTGTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS-3UTR CAA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAGGAAAGGGCAACAGGTaGAGGCCTCGGTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQGKGNR*RPRSPA
Trigger: TGCTGGGGACCGAGGCCTCAACCTGTTGCCCTTTCC...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGGCCACGTGGGATCTGGTCAGCTTCCTTaGGGAGCAGATTCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GPLWNEKASHRICKGHVGSGQLP*GADSQR
Trigger: CCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGA...TCCCACGTGGCCTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCACCAGGCACTCTCTGCTaGCCCAGATCTTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SLLAQILLWSASFGSRFAPGTLC*PRSCSG
Trigger: ACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGG...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCACAGGCACCAGGTCACTaGGCACGCTCCGTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: SLLAQILLWSASFGSRFAQAPGH*ARSVVL
Trigger: CAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 90 bp TGCCTGGGCCAAGATACTCAGCACCCATCTGGAGATTGCATGAAGTaGCAAGACGTGCTGCTGAGCCAGTGTCATGGTAAAGAAGCCGGA +
Preference number: 5 (lower is better)
Translates to: CLGQDTQHPSGDCMK*QDVLLSQCHGKEAG
Trigger: TCCGGCTTCTTTACCATGACACTGGCTCAGCAGCACGTCTTGGCACTTCATGCAATCTCCAGATGGGTGCTGAGTATCTTGGCCCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS GCA 90 bp GGAGTGACGTGCCTGGGCCAAGATACTCAGCACCCATCTGGAGATTaGATGAAGTGCCAAGACGTGCTGCTGAGCCAGTGTCATGGTAAA +
Preference number: 5 (lower is better)
Translates to: GVTCLGQDTQHPSGD*MKCQDVLLSQCHGK
Trigger: TTTACCATGACACTGGCTCAGCAGCACGTCTTGGCACTTCATGCAATCTCCAGATGGGTGCTGAGTATCTTGGCCCAGGCACGTCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS-3UTR CAA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCACCTGGACACTGTCCTaGTACTGGCAGGTCAGGATG +
Preference number: 5 (lower is better)
Translates to: HSLLAQILLWSASFGSRFTWTLS*YWQVRM
Trigger: CATCCTGACCTGCCAGTACAAGGACAGTGTCCAGGT...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CAA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAAACCTGGACACTGTCCTaGTACTGGCAGGTCAGGATG +
Preference number: 5 (lower is better)
Translates to: GHLARSVVLLVKAWDGSETWTLS*YWQVRM
Trigger: CATCCTGACCTGCCAGTACAAGGACAGTGTCCAGGT...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS-3UTR CAA 90 bp AAGGTGGGGGACACTGTAGCTCCAGGTTTTCTCCTGTTGCAGAGAGAAGCCAGCCGAACACCTGTCCTCTaGAAGAATTCACTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: KVGDTVAPGFLLLQREASRTPVL*KNSLQG
Trigger: GCCCTGGAGTGAATTCTTCAAGAGGACAGGTGTTCG...GCTGGCTTCTCTCTGCAACAGGAGAAAACCTGGAGCTACAGTGTCCCCCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTGGCCTGCTTAGCCACTaGTCCCTCTCCTGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCGLLSH*SLSWAS
Trigger: GCTTGCCCAGGAGAGGGACAAGTGGCTAAGCAGGCC...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CAGGCACCAGGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATAAGAGCAGGTGGTCATaGAGCTTCTGGACAAAGCCC +
Preference number: 5 (lower is better)
Translates to: QAPGHLARSVVLLVKAWDKSRWS*SFWTKP
Trigger: GGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCTT...ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGCAGAGGCAGGCTTCCTaGGCGGAAGCCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRQRQAS*AEAFST
Trigger: TGTGCTGAAGGCTTCCGCCAAGGAAGCCTGCCTCTG...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CACTCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCCTCCAAGGCCTCCTTTaGCTGTGGCTCCTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: HSLLAQILLWSASFGSRFLQGLL*LWLLGQ
Trigger: TTGACCAAGGAGCCACAGCAAAAGGAGGCCTTGGAG...GAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GGTCACTTGGCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCTGGTCAGCTTCCTTaGGGAGCAGATTCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GHLARSVVLLVKAWDGSESGQLP*GADSQR
Trigger: CCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGA...TTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGCCAAGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TCTACAACTCTAAGCCATAGGGAATGCCTCAAAGGGCCTCTTCAGGGTTGGCCTCCAGGCACTCTCTGCTaGCCCAGATCTTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: STTLSHRECLKGPLQGWPPGTLC*PRSCSG
Trigger: ACCAGAGCAAGATCTGGGCAAGCAGAGAGTGCCTGG...AGGCCAACCCTGAAGAGGCCCTTTGAGGCATTCCCTATGGCTTAGAGTTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp AACCCTTTCCAGGGCCCTTGTGGAATGAGAAGGCCAGCCATAGGATTTGTAAAGCCCTTTCCAGGGCCCTaGTGGAATGAGAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NPFQGPCGMRRPAIGFVKPFPGP*WNEKAS
Trigger: GCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGG...CTTTACAAATCCTATGGCTGGCCTTCTCATTCCACAAGGGCCCTGGAAAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGTCACTGCTACCAACTaGGCAAGGGACCGCCACCCT +
Preference number: 5 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLVTATN*ARDRHP
Trigger: AGGGTGGCGGTCCCTTGCCAAGTTGGTAGCAGTGAC...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp AGGGAAATACGGTTTCCAAGCCAAATGGACATTCGCCTGGGAGAATaGCAACCCTCCTCTCCCAAAGTTCTTCCGCAGAGCCCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: REIRFPSQMDIRLGE*QPSSPKVLPQSPVG
Trigger: TCCCACAGGGCTCTGCGGAAGAACTTTGGGAGAGGAGGGTTGTCATTCTCCCAGGCGAATGTCCATTTGGCTTGGAAACCGTATTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS-3UTR CAA 90 bp GCACGCTCCGTAGTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCGAACACCTGTCCTCTaGAAGAATTCACTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: ARSVVLLVKAWDGSESLGRTPVL*KNSLQG
Trigger: GCCCTGGAGTGAATTCTTCAAGAGGACAGGTGTTCG...ACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp TCTCTGCTTGCCCAGATCTTGCTCTGGTCAGCTTCCTTTGGGAGCAGATTCGCACGAACACCTGTCCTCTaGAAGAATTCACTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SLLAQILLWSASFGSRFARTPVL*KNSLQG
Trigger: GCCCTGGAGTGAATTCTTCAAGAGGACAGGTGTTCG...TGCGAATCTGCTCCCAAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTATCTTCAGGGTTGGCCTaGCTAAGGGACTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLSSGLA*LRDSQP
Trigger: TGGCTGGGAGTCCCTTAGCAAGGCCAACCCTGAAGA...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS CCA 90 bp GGCACCTGGGCACCTCTAAAAGGGAAATACGGTTTCCAAGCCAAATaGACATTCGCCTGGGAGAATGACAACCCTCCTCTCCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: GTWAPLKGKYGFQAK*TFAWENDNPPLPKF
Trigger: GAACTTTGGGAGAGGAGGGTTGTCATTCTCCCAGGCGAATGTCCATTTGGCTTGGAAACCGTATTTCCCTTTTAGAGGTGCCCAGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS-3UTR CAA 90 bp CACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGAATGCCTCAAACGAGCCAGGCGGGTCTaGCCAGTGTACACCAAGAGC +
Preference number: 5 (lower is better)
Translates to: HMRVECKSTTLSHRECLKRARRV*PVYTKS
Trigger: GCTCTTGGTGTACACTGGCAAGACCCGCCTGGCTCG...TTTGAGGCATTCCCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGTCTGGTCAGCTTCCTTaGGGAGCAGATTCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRSGQLP*GADSQR
Trigger: CCTCTGCGAATCTGCTCCCAAAGGAAGCTGACCAGA...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCAGGCACCAGGTCACTaGGCACGCTCCGTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCQAPGH*ARSVVL
Trigger: CAAAACTACGGAGCGTGCCAAGTGACCTGGTGCCTG...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS CCA 90 bp CCTCTAAAAGGGAAATACGGTTTCCAAGCCAAATGGACATTCGCCTaGGAGAATGACAACCCTCCTCTCCCAAAGTTCTTCCGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: PLKGKYGFQAKWTFA*ENDNPPLPKFFRRA
Trigger: GGCTCTGCGGAAGAACTTTGGGAGAGGAGGGTTGTCATTCTCCCAGGCGAATGTCCATTTGGCTTGGAAACCGTATTTCCCTTTTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS-3UTR CAA 90 bp GGGATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTACTGCTTGCCCAGATCTaGCTCTGGTCAGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GILSLGPSYVQEEQRLHLLLAQI*LWSASF
Trigger: AAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAG...TAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GATACTAAGCTTGGGACCTTCCTATGTCCAGGAGGAACAGAGGCTACATCTAGGCGTGGGATACTAAGCTaGGGACCTTCCTATGTCCAG +
Preference number: 5 (lower is better)
Translates to: DTKLGTFLCPGGTEATSRRGILS*GPSYVQ
Trigger: CTGGACATAGGAAGGTCCCAAGCTTAGTATCCCACG...CCTAGATGTAGCCTCTGTTCCTCCTGGACATAGGAAGGTCCCAAGCTTAGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GTTTTGCTAGTTAAGGCCTGGGATGGCAGTGAATCACTGGGTCACTGCTACCAAGCACGCTCCGTAGTTTaGCTAGTTAAGGCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: VLLVKAWDGSESLGHCYQARSVV*LVKAWD
Trigger: ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC...TTGGTAGCAGTGACCCAGTGATTCACTGCCATCCCAGGCCTTAACTAGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp CACTCCCACGCTCACATGAGGGTTGAGTGTAAGTCTACAACTCTAAGCCATAGGGCACGCTCCGTAGTTTaGCTAGTTAAGGCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: HSHAHMRVECKSTTLSHRARSVV*LVKAWD
Trigger: ATCCCAGGCCTTAACTAGCAAAACTACGGAGCGTGC...CCTATGGCTTAGAGTTGTAGACTTACACTCAACCCTCATGTGAGCGTGGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS-3UTR CAA 90 bp GCCATAGGATTTGTAAAGGCCACGTGGGATACTAAGCTTGGGACCTTCCTATGTCTGCTTGCCCAGATCTaGCTCTGGTCAGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: AIGFVKATWDTKLGTFLCLLAQI*LWSASF
Trigger: AAAGGAAGCTGACCAGAGCAAGATCTGGGCAAGCAG...ACATAGGAAGGTCCCAAGCTTAGTATCCCACGTGGCCTTTACAAATCCTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS TCA 90 bp TTTGTTTTAGACCTAATGTATAATTGGAATTGGGATAAACCACACTaGAGAATAAAGATTTTACACTATGGCCGGGCACGGTGGCACACG +
Preference number: 5 (lower is better)
Translates to: FVLDLMYNWNWDKPH*RIKILHYGRARWHT
Trigger: CGTGTGCCACCGTGCCCGGCCATAGTGTAAAATCTTTATTCTTCAGTGTGGTTTATCCCAATTCCAATTATACATTAGGTCTAAAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS GCA 72 bp CACCGCCAGCCACAGCTCAGGCTCCGGGATGCGGCGTaGCCTGGCTCCGATGGGCCGGCGGCCGTCCACTCG +
Preference number: 6 (lower is better)
Translates to: HRQPQLRLRDAA*PGSDGPAAVHS
Trigger: CGAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGCTGTGGCTGGCGGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 72 bp GGATCCTCTGAGGCCCGCATCCCTCCCGGTCCCAGCTaGCAGCAGGTCCGGCCGCACCAGCCGGGTCGCGGG +
Preference number: 6 (lower is better)
Translates to: GSSEARIPPGPS*QQVRPHQPGRG
Trigger: CCCGCGACCCGGCTGGTGCGGCCGGACCTGCTGGCAGCTGGGACCGGGAGGGATGCGGGCCTCAGAGGATCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573352.5
CDS CCA 72 bp GCTCAGGCTCCGGGATGCGGCGTGCCCTGGCTCCGATaGGCCGGCGGCCGTCCACTCGCACAGCCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: AQAPGCGVPWLR*AGGRPLAQPGP
Trigger: TGGGCCTGGCTGTGCGAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS CCA 72 bp CCAGCCACAGCTCAGGCTCCGGGATGCGGCGTGCCCTaGCTCCGATGGGCCGGCGGCCGTCCACTCGCACAG +
Preference number: 6 (lower is better)
Translates to: PATAQAPGCGVP*LRWAGGRPLAQ
Trigger: CTGTGCGAGTGGACGGCCGCCGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGCTGTGGCTGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS CCA 72 bp GCCCGCCAGGCTCGCAGGGCCTCGCCCCCATCCTCCTaGTGGTCCAGCATCCACAGCAGGTCCTGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: ARQARRASPPSS*WSSIHSRSWGP
Trigger: GGGACCCCAGGACCTGCTGTGGATGCTGGACCACCAGGAGGATGGGGGCGAGGCCCTGCGAGCCTGGCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp CGCCAGGCTCGCAGGGCCTCGCCCCCATCCTCCTGGTaGTCCAGCATCCACAGCAGGTCCTGGGGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: RQARRASPPSSW*SSIHSRSWGPS
Trigger: GCTGGGACCCCAGGACCTGCTGTGGATGCTGGACCACCAGGAGGATGGGGGCGAGGCCCTGCGAGCCTGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp CGGGCCTCCAGCACGTGCCGCGCCTTATGCAGGGCCTaGCGGAAGAACAGGTCCCGGCGAGAGGCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: RASSTCRALCRA*RKNRSRREASV
Trigger: CACGCTGGCCTCTCGCCGGGACCTGTTCTTCCGCCAGGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp GGTCCGGCCGCACCAGCCGGGTCGCGGGGCTCCCCTTaGAAGACCCAGGCCAAATGGACGCGGGAGCGTAGA +
Preference number: 6 (lower is better)
Translates to: GPAAPAGSRGSP*KTQAKWTRERR
Trigger: TCTACGCTCCCGCGTCCATTTGGCCTGGGTCTTCCAAGGGGAGCCCCGCGACCCGGCTGGTGCGGCCGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573352.5
CDS TCA 72 bp GTCAGGGCTCCCAGCTGTCCAGACGGCCAACGAGGGTaGAGGCGTGGCCCGGGGAGCCGTGTAGCCGCGTGT +
Preference number: 6 (lower is better)
Translates to: VRAPSCPDGQRG*RRGPGSRVAAC
Trigger: ACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTCTGGACAGCTGGGAGCCCTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS GCA 72 bp ACAGCAGCCCAGATCAGCGGGCGCAGGCTGAGGTCCTaGCGGGCCTCCAGCACGTGCCGCGCCTTATGCAGG +
Preference number: 6 (lower is better)
Translates to: TAAQISGRRLRS*RASSTCRALCR
Trigger: CCTGCATAAGGCGCGGCACGTGCTGGAGGCCCGGCAGGACCTCAGCCTGCGCCCGCTGATCTGGGCTGCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 72 bp GCTCCAGGTGCAGCACTGCGTGGATCAGGGCTTCCGTaGCCACCACCCGGCCTGCGGCTCGCTGCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: APGAALRGSGLP*PPPGLRLAARQ
Trigger: CTGCCTTGCAGCGAGCCGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS CCA 72 bp GTGAAGGCGTGGCCCGGGGAGCCGTGTAGCCGCGTGTaGTGTCCCTGCAGGACAAGGTCACGCAGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: VKAWPGEPCSRV*CPCRTRSRSSR
Trigger: CCGGGAGCTGCGTGACCTTGTCCTGCAGGGACACCACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp TCCCAGCTGTCCAGACGGCCAACGAGGGTGAAGGCGTaGCCCGGGGAGCCGTGTAGCCGCGTGTGGTGTCCC +
Preference number: 6 (lower is better)
Translates to: SQLSRRPTRVKA*PGEPCSRVWCP
Trigger: GGGACACCACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTCTGGACAGCTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS TCA 72 bp CCTGTCTCTCCCAGCTGTCCAGACGGCCAACGAGGGTaGAGGCGTGGCCCGGGGAGCCGTGTAGCCGCGTGT +
Preference number: 6 (lower is better)
Translates to: PVSPSCPDGQRG*RRGPGSRVAAC
Trigger: ACACGCGGCTACACGGCTCCCCGGGCCACGCCTTCACCCTCGTTGGCCGTCTGGACAGCTGGGAGAGACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
CDS TCA 72 bp AGCGGAGGGGCTTCCTGCCTCAGGGTGAGGATCCTCTaGGGCCCGCATCCCTCCCGGTCCCAGCTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: SGGASCLRVRIL*GPHPSRSQLPA
Trigger: TGCTGGCAGCTGGGACCGGGAGGGATGCGGGCCTCAGAGGATCCTCACCCTGAGGCAGGAAGCCCCTCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573352.5
CDS CCA 72 bp CCAGTGGTGAGCACCTGCTCCAGGTGCAGCACTGCGTaGATCAGGGCTTCCGTGCCCACCACCCGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: PVVSTCSRCSTA*IRASVPTTRPA
Trigger: CGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
ENST00000573832.1
CDS CAA 72 bp CACTCCAGGTATGAGAAGGGCCGCATCCACTCAGGGTaGGCAGCTGGCCCGCTCCGCAAGCCCCCACGGCCC +
Preference number: 6 (lower is better)
Translates to: HSRYEKGRIHSG*AAGPLRKPPRP
Trigger: GGGCCGTGGGGGCTTGCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGCGGCCCTTCTCATACCTGGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 72 bp CACAGGAAAGAGGCGGGCGCTGGGAAGGCAGTACTCTaGGGGCAGCGTCTCAGGGTCCCACAGGTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: HRKEAGAGKAVL*GQRLRVPQVPG
Trigger: GCCTGGGACCTGTGGGACCCTGAGACGCTGCCCGCAGAGTACTGCCTTCCCAGCGCCCGCCTCTTTCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp CCCTCGAGGGGTGGAGCACAGGAAAGAGGCGGGCGCTaGGAAGGCAGTACTCTGCGGGCAGCGTCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: PSRGGAQERGGR*EGSTLRAASQG
Trigger: ACCCTGAGACGCTGCCCGCAGAGTACTGCCTTCCCAGCGCCCGCCTCTTTCCTGTGCTCCACCCCTCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp ACTCCAGGTATGAGAAGGGCCGCATCCACTCAGGGTTaGCAGCTGGCCCGCTCCGCAAGCCCCCACGGCCCT +
Preference number: 6 (lower is better)
Translates to: TPGMRRAASTQG*QLARSASPHGP
Trigger: AGGGCCGTGGGGGCTTGCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGCGGCCCTTCTCATACCTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp ACAGTGGTGAGCACCTGCTCCAGGTGCAGCACTGCGTaGATCAGGGCTTCCGTGCCCACCACCCGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: TVVSTCSRCSTA*IRASVPTTRPA
Trigger: CGCAGGCCGGGTGGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS CAA 90 bp AGGTCTCCACACTCCAGGTATGAGAAGGGCCGCATCCACTCAGGGTaGGCAGCTGGCCCGCTCCGCAAGCCCCCACGGCCCTCTGCCATG +
Preference number: 6 (lower is better)
Translates to: RSPHSRYEKGRIHSG*AAGPLRKPPRPSAM
Trigger: CATGGCAGAGGGCCGTGGGGGCTTGCGGAGCGGGCCAGCTGCCAACCCTGAGTGGATGCGGCCCTTCTCATACCTGGAGTGTGGAGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 72 bp CAGGATTTGCAGGAACAGACAGCAGCATGTCGGTGCTaGAGACCCACACGCCTGGCGGGGAGCCCGGGCCCA +
Preference number: 6 (lower is better)
Translates to: QDLQEQTAACRC*RPTRLAGSPGP
Trigger: TGGGCCCGGGCTCCCCGCCAGGCGTGTGGGTCTGCAGCACCGACATGCTGCTGTCTGTTCCTGCAAATCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571487.5
CDS GCA 72 bp AAATCCACACGGGCCGGGCACTCAGCCACCACCCACTaGCCAGGTCCCGGCAGTTCCACCTGCTCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: KSTRAGHSATTH*PGPGSSTCSVE
Trigger: CTCCACAGAGCAGGTGGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTGAGTGCCCGGCCCGTGTGGATTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 72 bp TGCCAGCCACCTCCAGTGGTGAGCACCTGCTCCAGGTaGAGCACTGCGTGGATCAGGGCTTCCGTGCCCACC +
Preference number: 6 (lower is better)
Translates to: CQPPPVVSTCSR*STAWIRASVPT
Trigger: GGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGGAGGTGGCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp GGTAGGTGCAGGCATCCAGGGGCGGGCTCACGTGGGTaGCTAGGAGGCGCTCGGCAGTCTCCACAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: GRCRHPGAGSRG*LGGARQSPQRR
Trigger: TCTTCTCTGTGGAGACTGCCGAGCGCCTCCTAGCCACCCACGTGAGCCCGCCCCTGGATGCCTGCACCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571487.5
ENST00000571514.5
CDS CCA 72 bp AGGTCACGCAGCTCCCGGCCATGCAGGGCCTTGGAGTaGGCTGTATCCAGGCCAGTCACCAAGCAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: RSRSSRPCRALE*AVSRPVTKQPA
Trigger: CGCTGGCTGCTTGGTGACTGGCCTGGATACAGCCCACTCCAAGGCCCTGCATGGCCGGGAGCTGCGTGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp CCATCCTCCTGGTGGTCCAGCATCCACAGCAGGTCCTaGGGTCCCAGCTCCCTCGAGGGGTGGAGCACAGGA +
Preference number: 6 (lower is better)
Translates to: PSSWWSSIHSRS*GPSSLEGWSTG
Trigger: TCCTGTGCTCCACCCCTCGAGGGAGCTGGGACCCCAGGACCTGCTGTGGATGCTGGACCACCAGGAGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS TCA 72 bp CTCCACGCCCGCTGCCAGGTCTCCACACTCCAGGTATaGGAAGGGCCGCATCCACTCAGGGTTGGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LHARCQVSTLQV*EGPHPLRVGSW
Trigger: CCAGCTGCCAACCCTGAGTGGATGCGGCCCTTCTCATACCTGGAGTGTGGAGACCTGGCAGCGGGCGTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS GCA 72 bp TGTCCCTGCAGGACAAGGTCACGCAGCTCCCGGCCATaGAGGGCCTTGGAGTGGGCTGTATCCAGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: CPCRTRSRSSRP*RALEWAVSRPV
Trigger: GACTGGCCTGGATACAGCCCACTCCAAGGCCCTGCATGGCCGGGAGCTGCGTGACCTTGTCCTGCAGGGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp GTAGACGCCATGATTCTGAGCGTAGGCCGGGCTCCCTaGGAGGGCGATCACTCTGGCTCCCCGGAAGCTGTC +
Preference number: 6 (lower is better)
Translates to: VDAMILSVGRAP*EGDHSGSPEAV
Trigger: GACAGCTTCCGGGGAGCCAGAGTGATCGCCCTCCCAGGGAGCCCGGCCTACGCTCAGAATCATGGCGTCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571487.5
CDS CCA 72 bp GGACAAGGTCACGCAGCTCCCGGCCATGCAGGGCCTTaGAGTGGGCTGTATCCAGGCCAGTCACCAAGCAGC +
Preference number: 6 (lower is better)
Translates to: GQGHAAPGHAGP*SGLYPGQSPSS
Trigger: GCTGCTTGGTGACTGGCCTGGATACAGCCCACTCCAAGGCCCTGCATGGCCGGGAGCTGCGTGACCTTGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp TACCTGGGGGAACAGTGGGAGGGAAGTGGCTCTATCTaGGACGAGGCACCACGGGCCACCACCCAGCCTCAC +
Preference number: 6 (lower is better)
Translates to: YLGEQWEGSGSI*DEAPRATTQPH
Trigger: GTGAGGCTGGGTGGTGGCCCGTGGTGCCTCGTCCCAGATAGAGCCACTTCCCTCCCACTGTTCCCCCAGGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576107.5
CDS TCA 72 bp CAACCCCAGAGACCAGTGGCACCCGCCCATCAGGCCTaGCACACCGCTGAATCTCTGCCTCAGTGCCCTGGT +
Preference number: 6 (lower is better)
Translates to: QPQRPVAPAHQA*HTAESLPQCPG
Trigger: ACCAGGGCACTGAGGCAGAGATTCAGCGGTGTGTCAGGCCTGATGGGCGGGTGCCACTGGTCTCTGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571487.5
CDS GCA 72 bp AGGCACCGGCACACTATCTTCACAGTCATCTCATCCTaGCGAGGCCCCACCGCCAGCCACAGCTCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: RHRHTIFTVISS*RGPTASHSSGS
Trigger: GGAGCCTGAGCTGTGGCTGGCGGTGGGGCCTCGGCAGGATGAGATGACTGTGAAGATAGTGTGCCGGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 72 bp TGCAGCTCAAAGCCGCCCCCGAAGGTGCGGAGCAGCTaGTCACTCAGCTGGAGTTCCGAGTGGACATGCACG +
Preference number: 6 (lower is better)
Translates to: CSSKPPPKVRSS*SLSWSSEWTCT
Trigger: CGTGCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCTGCTCCGCACCTTCGGGGGCGGCTTTGAGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 72 bp AACCCCGTCTCTACAGTGGTGAGCACCTGCTCCAGGTaGAGCACTGCGTGGATCAGGGCTTCCGTGCCCACC +
Preference number: 6 (lower is better)
Translates to: NPVSTVVSTCSR*STAWIRASVPT
Trigger: GGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGTAGAGACGGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS GCA 72 bp GGCAGTCACATACCAGTGGTGAGCACCTGCTCCAGGTaGAGCACTGCGTGGATCAGGGCTTCCGTGCCCACC +
Preference number: 6 (lower is better)
Translates to: GSHIPVVSTCSR*STAWIRASVPT
Trigger: GGTGGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGGTATGTGACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573832.1
CDS CCA 72 bp CACTGGCTGAGGAGGTCATGTAGCTGTAGCTGCCGCTaGAGACATAGGCTGGACAGGCCGGGCTCCGGAGTC +
Preference number: 6 (lower is better)
Translates to: HWLRRSCSCSCR*RHRLDRPGSGV
Trigger: GACTCCGGAGCCCGGCCTGTCCAGCCTATGTCTCCAGCGGCAGCTACAGCTACATGACCTCCTCAGCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571514.5
CDS CAA 72 bp AGGACAAGGTCACGCAGCTCCCGGCCATGCAGGGCCTaGGAGTGGGCTGTATCCAGGCCAGTCACCAAGCAG +
Preference number: 6 (lower is better)
Translates to: RTRSRSSRPCRA*EWAVSRPVTKQ
Trigger: CTGCTTGGTGACTGGCCTGGATACAGCCCACTCCAAGGCCCTGCATGGCCGGGAGCTGCGTGACCTTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS TCA 72 bp CCCGGGGAGTGTGAGGCTGAGCAGGAACTCACTGGCTaGGGAGGTCATGTAGCTGTAGCTGCCGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: PGECEAEQELTG*GGHVAVAAAGD
Trigger: GTCTCCAGCGGCAGCTACAGCTACATGACCTCCTCAGCCAGTGAGTTCCTGCTCAGCCTCACACTCCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS TCA 72 bp ACCACGGGCCACCACCCAGCCTCACCCGATAGGTCATaGTGTCCAGCAGGCAGTCCAGGTTGCAGACCAAGG +
Preference number: 6 (lower is better)
Translates to: TTGHHPASPDRS*CPAGSPGCRPR
Trigger: CCTTGGTCTGCAACCTGGACTGCCTGCTGGACATCATGACCTATCGGGTGAGGCTGGGTGGTGGCCCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576107.5
CDS GCA 72 bp GCCACCACCCACTGCCCAGGTCCCGGCAGTTCCACCTaGTCTGTGGAGACAAAGTGCTGGGCTGACATCACA +
Preference number: 6 (lower is better)
Translates to: ATTHCPGPGSST*SVETKCWADIT
Trigger: TGTGATGTCAGCCCAGCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGGACCTGGGCAGTGGGTGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 72 bp ACTCAGCTGGAGTTCCGAGTGGACATGCACGATCCCTaGACAGATGAAGGCCGCCTTCAGCAGGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: TQLEFRVDMHDP*TDEGRLQQGPW
Trigger: CCAGGGGCCCTGCTGAAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 72 bp GGAACTCACTGGCTGAGGAGGTCATGTAGCTGTAGCTaGCGCTGGAGACATAGGCTGGACAGGCCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: GTHWLRRSCSCS*RWRHRLDRPGS
Trigger: GGAGCCCGGCCTGTCCAGCCTATGTCTCCAGCGGCAGCTACAGCTACATGACCTCCTCAGCCAGTGAGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571514.5
CDS CCA 72 bp TCTCCCAGCCTAGGCTCCCGGCCCTGCACCCCTTGCTaGGACCAGTGTGGAAAGATAGCTTCCCTCAACTCC +
Preference number: 6 (lower is better)
Translates to: SPSLGSRPCTPC*DQCGKIASLNS
Trigger: GGAGTTGAGGGAAGCTATCTTTCCACACTGGTCCCAGCAAGGGGTGCAGGGCCGGGAGCCTAGGCTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CCA 72 bp CAGGGCACGTTGAGATATGTGCCTGCCCCCTGTCTCTaGGGGAGAGGAAGAAGCAGTCAGGGCTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: QGTLRYVPAPCL*GRGRSSQGSQL
Trigger: CAGCTGGGAGCCCTGACTGCTTCTTCCTCTCCCCCAGAGACAGGGGGCAGGCACATATCTCAACGTGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS GCA 72 bp GGTCCCGGCAGTTCCACCTGCTCTGTGGAGACAAAGTaGTGGGCTGACATCACAGCCTGGCGGATCAGGATC +
Preference number: 6 (lower is better)
Translates to: GPGSSTCSVETK*WADITAWRIRI
Trigger: GATCCTGATCCGCCAGGCTGTGATGTCAGCCCAGCACTTTGTCTCCACAGAGCAGGTGGAACTGCCGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000571514.5
CDS GCA 72 bp CAACTCCAGGGCAGTCACATACCAGTGGTGAGCACCTaGTCCAGGTGCAGCACTGCGTGGATCAGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: QLQGSHIPVVST*SRCSTAWIRAS
Trigger: GGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGGTATGTGACTGCCCTGGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573832.1
CDS CCA 72 bp AGGCTCCCGGCCCTGCACCCCTTGCTGGGACCAGTGTaGAAAGATAGCTTCCCTCAACTCCACAGGACAGTG +
Preference number: 6 (lower is better)
Translates to: RLPALHPLLGPV*KDSFPQLHRTV
Trigger: CACTGTCCTGTGGAGTTGAGGGAAGCTATCTTTCCACACTGGTCCCAGCAAGGGGTGCAGGGCCGGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CCA 72 bp CCAGCCACCTCCTGTGAGCCCAGGGACTGTCACTGTTaGAGTCTATCTGGCCCAGCTTCACTCTCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: PATSCEPRDCHC*SLSGPASLSQP
Trigger: AGGCTGGGAGAGTGAAGCTGGGCCAGATAGACTCCAACAGTGACAGTCCCTGGGCTCACAGGAGGTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CAA 90 bp AGGAAGCCCCTCACCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGCATTCTGCACCACAGCAGGAAGTCG +
Preference number: 6 (lower is better)
Translates to: RKPLTLAEAFSTLLS*PYQAVGILHHSRKS
Trigger: CGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGTGAGGGGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS TCA 72 bp ACCTCCTCCAACTCCAGGGCAGTCACATACCAGTGGTaGGCACCTGCTCCAGGTGCAGCACTGCGTGGATCA +
Preference number: 6 (lower is better)
Translates to: TSSNSRAVTYQW*APAPGAALRGS
Trigger: TGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCACCACTGGTATGTGACTGCCCTGGAGTTGGAGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573832.1
CDS GCA 72 bp AGCAGCTGCTCACTCAGCTGGAGTTCCGAGTGGACATaGACGATCCCTGCACAGATGAAGGCCGCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SSCSLSWSSEWT*TIPAQMKAAFS
Trigger: GCTGAAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTCCACTCGGAACTCCAGCTGAGTGAGCAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288078.11
ENST00000464499.5
ENST00000498702.1
ENST00000571514.5
ENST00000573832.1
CDS GCA 72 bp TCTCGACCCATGTGCAGAATGAGGATCCAGGCCGAGTaGAGGACATCGGATGTGACCACCTGCAGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: SRPMCRMRIQAE*RTSDVTTCRSG
Trigger: CCCACTCCTGCAGGTGGTCACATCCGATGTCCTGCACTCGGCCTGGATCCTCATTCTGCACATGGGTCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378912.6
CDS GCA 72 bp GACCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCATTCTGCACCACAGCA +
Preference number: 6 (lower is better)
Translates to: DPWRKPSAHSSV*RTRLWAFCTTA
Trigger: TGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464499.5
CDS GCA 72 bp CATCTAGGGAGCTGTGAAGCCACACACTGGGGACCCTaGCCAGCTCAGACTTCCTTGGAACTCAGCCATGGG +
Preference number: 6 (lower is better)
Translates to: HLGSCEATHWGP*PAQTSLELSHG
Trigger: CCCATGGCTGAGTTCCAAGGAAGTCTGAGCTGGGCAGGGTCCCCAGTGTGTGGCTTCACAGCTCCCTAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS GCA 72 bp ACCTTGATGCCAGGCATTAGGCCACCTACTTGGTCCTaGCAGCCACCTCCTGTGAGCCCAGGGACTGTCACT +
Preference number: 6 (lower is better)
Translates to: TLMPGIRPPTWS*QPPPVSPGTVT
Trigger: AGTGACAGTCCCTGGGCTCACAGGAGGTGGCTGGCAGGACCAAGTAGGTGGCCTAATGCCTGGCATCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CCA 72 bp CCAACTCTGGGGGCCTCCCCACCAGGAAGTCCTCCCTaGTCACGTTCTCAGCCATGCAGTGGAGAATGTCAA +
Preference number: 6 (lower is better)
Translates to: PTLGASPPGSPP*SRSQPCSGECQ
Trigger: TTGACATTCTCCACTGCATGGCTGAGAACGTGACCAGGGAGGACTTCCTGGTGGGGAGGCCCCCAGAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288078.11
ENST00000378912.6
CDS CCA 72 bp AACCCTCCTCTCCCAAAGTTCTTCCGCAGAGCCCTGTaGGACAGAAGGGGCAGGGCTGCTTCTGTCCATCCT +
Preference number: 6 (lower is better)
Translates to: NPPLPKFFRRAL*DRRGRAASVHP
Trigger: AGGATGGACAGAAGCAGCCCTGCCCCTTCTGTCCCACAGGGCTCTGCGGAAGAACTTTGGGAGAGGAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS CAA 72 bp AGACCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGCATTCTGCACCACAGC +
Preference number: 6 (lower is better)
Translates to: RPLAEAFSTLLS*PYQAVGILHHS
Trigger: GCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464499.5
CDS CAA 72 bp CTCACCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGCATTCTGCACCACAGC +
Preference number: 6 (lower is better)
Translates to: LTLAEAFSTLLS*PYQAVGILHHS
Trigger: GCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CAA 90 bp GCGAGAGTAAGGGAGCACTGGTGCCACTGCCACGGAGGAAACTCCTaGGATTCAGGAACATGCGAGGAAATCCAGGATGAGAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: ARVREHWCHCHGGNS*DSGTCEEIQDERLP
Trigger: GGGCAGCCTCTCATCCTGGATTTCCTCGCATGTTCCTGAATCCAAGGAGTTTCCTCCGTGGCAGTGGCACCAGTGCTCCCTTACTCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571487.5
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTACAGTGGTGAGCACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSTVVSTCS
Trigger: GGAGCAGGTGCTCACCACTGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498702.1
CDS GCA 72 bp TCTCGACCCATGTGCAGAATGAGGATCCAGGCCGAGTaGAGGACATCGGATGTGACCACAGTGAAGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SRPMCRMRIQAE*RTSDVTTVKPA
Trigger: GGCAGGCTTCACTGTGGTCACATCCGATGTCCTGCACTCGGCCTGGATCCTCATTCTGCACATGGGTCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288078.11
ENST00000464499.5
ENST00000572784.5
ENST00000573352.5
ENST00000574784.5
ENST00000576107.5
ENST00000576453.1
CDS GCA 72 bp CTGAGCCAGTGTCATGGTAAAGAAGCCGGATTCCAGTaGCGGCTGGAGCCAGGAGTAACCCACTTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: LSQCHGKEAGFQ*RLEPGVTHFPG
Trigger: TCCTGGGAAGTGGGTTACTCCTGGCTCCAGCCGGCACTGGAATCCGGCTTCTTTACCATGACACTGGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS GCA 72 bp TCACCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTTaGCGTACCAGGCTGTGGGCATTCTGCACCACAGCA +
Preference number: 6 (lower is better)
Translates to: SPWRKPSAHSSV*RTRLWAFCTTA
Trigger: TGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CAA 90 bp CTAAATGTGAGACCCTTGGCGGAAGCCTTCAGCACACTCCTCAGTTaGCCGTACCAGGCTGTGGGCATTCTGCACCACAGCAGGAAGTCG +
Preference number: 6 (lower is better)
Translates to: LNVRPLAEAFSTLLS*PYQAVGILHHSRKS
Trigger: CGACTTCCTGCTGTGGTGCAGAATGCCCACAGCCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGGTCTCACATTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464499.5
CDS CAA 90 bp CAGGCTCGAACACCTGTCCTCTTGAAGAATTCACTCCAGGGCACGTaGAGATATGTGCCTGCCCCCTGTCTCTGGGGGAGAGGAAGAAGC +
Preference number: 6 (lower is better)
Translates to: QARTPVLLKNSLQGT*RYVPAPCLWGRGRS
Trigger: GCTTCTTCCTCTCCCCCAGAGACAGGGGGCAGGCACATATCTCAACGTGCCCTGGAGTGAATTCTTCAAGAGGACAGGTGTTCGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS TCA 72 bp CACAGGTGGCAGCAAGGGCATTCTCCAAAGGAAAGCTaGGGACGCAAGGCTGGCAGTTGCTGGCATTCTCAG +
Preference number: 6 (lower is better)
Translates to: HRWQQGHSPKES*GRKAGSCWHSQ
Trigger: CTGAGAATGCCAGCAACTGCCAGCCTTGCGTCCTCAGCTTTCCTTTGGAGAATGCCCTTGCTGCCACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571487.5
CDS GCA 72 bp AAGGCAGTCCCAGGTAGTCTCAGGCTCACCAGGATTTaGAGGAACAGACAGCAGCATGTCGGTGCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: KAVPGSLRLTRI*RNRQQHVGAAD
Trigger: GTCTGCAGCACCGACATGCTGCTGTCTGTTCCTGCAAATCCTGGTGAGCCTGAGACTACCTGGGACTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS GCA 72 bp CACCCGCCCATCAGGCCTGACACACCGCTGAATCTCTaGCTCAGTGCCCTGGTAGTAAATGTCCAAAACAAG +
Preference number: 6 (lower is better)
Translates to: HPPIRPDTPLNL*LSALVVNVQNK
Trigger: CTTGTTTTGGACATTTACTACCAGGGCACTGAGGCAGAGATTCAGCGGTGTGTCAGGCCTGATGGGCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571487.5
CDS GCA 72 bp GAAGAATTCACTCCAGGGCACGTTGAGATATGTGCCTaGCCCCTGTCTCTGGGGGAGAGGAAGAAGCAGTCA +
Preference number: 6 (lower is better)
Translates to: EEFTPGHVEICA*PLSLGERKKQS
Trigger: TGACTGCTTCTTCCTCTCCCCCAGAGACAGGGGGCAGGCACATATCTCAACGTGCCCTGGAGTGAATTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS CCA 72 bp AGTGACGTGCCTGGGCCAAGATACTCAGCACCCATCTaGAGATTGCATGAAGTGCCAAGACGTGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: SDVPGPRYSAPI*RLHEVPRRAAE
Trigger: CTCAGCAGCACGTCTTGGCACTTCATGCAATCTCCAGATGGGTGCTGAGTATCTTGGCCCAGGCACGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS CAA 72 bp GGGTCCCACAGGTCCCAGGCTCGAACACCTGTCCTCTaGAAGAATTCACTCCAGGGCACGTTGAGATATGTG +
Preference number: 6 (lower is better)
Translates to: GSHRSQARTPVL*KNSLQGTLRYV
Trigger: CACATATCTCAACGTGCCCTGGAGTGAATTCTTCAAGAGGACAGGTGTTCGAGCCTGGGACCTGTGGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288078.11
ENST00000378912.6
ENST00000464499.5
ENST00000571514.5
CDS CAA 72 bp ACACCTGTCCTCTTGAAGAATTCACTCCAGGGCACGTaGAGATATGTGCCTGCCCCCTGTCTCTGGGGGAGA +
Preference number: 6 (lower is better)
Translates to: TPVLLKNSLQGT*RYVPAPCLWGR
Trigger: TCTCCCCCAGAGACAGGGGGCAGGCACATATCTCAACGTGCCCTGGAGTGAATTCTTCAAGAGGACAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571514.5
CDS TCA 72 bp CGGTTTCCAAGCCAAATGGACATTCGCCTGGGAGAATaGCAACCCTCCTCTCCCAAAGTTCTTCCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: RFPSQMDIRLGE*QPSSPKVLPQS
Trigger: GCTCTGCGGAAGAACTTTGGGAGAGGAGGGTTGTCATTCTCCCAGGCGAATGTCCATTTGGCTTGGAAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS GCA 72 bp GTATTTTTGGCGAGAGTAAGGGAGCACTGGTGCCACTaGCACGGAGGAAACTCCTTGGATTCAGGAACATGC +
Preference number: 6 (lower is better)
Translates to: VFLARVREHWCH*HGGNSLDSGTC
Trigger: GCATGTTCCTGAATCCAAGGAGTTTCCTCCGTGGCAGTGGCACCAGTGCTCCCTTACTCTCGCCAAAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571487.5
CDS TCA 72 bp TGTGGAAAGATAGCTTCCCTCAACTCCACAGGACAGTaGGCTATGCAGCTTCTGTCCCCAGAACAATCCCAG +
Preference number: 6 (lower is better)
Translates to: CGKIASLNSTGQ*AMQLLSPEQSQ
Trigger: CTGGGATTGTTCTGGGGACAGAAGCTGCATAGCTCACTGTCCTGTGGAGTTGAGGGAAGCTATCTTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485034.1
CDS CCA 72 bp TTGGATCCTTATTCAGGTGATAGTGATAATGATATCTaGTCCCAAGCAAAGGCACTGCCGTCGCCCGGCGCT +
Preference number: 6 (lower is better)
Translates to: LDPYSGDSDNDI*SQAKALPSPGA
Trigger: AGCGCCGGGCGACGGCAGTGCCTTTGCTTGGGACCAGATATCATTATCACTATCACCTGAATAAGGATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574784.5
CDS GCA 72 bp CAAGATACTCAGCACCCATCTGGAGATTGCATGAAGTaGCAAGACGTGCTGCTGAGCCAGTGTCATGGTAAA +
Preference number: 6 (lower is better)
Translates to: QDTQHPSGDCMK*QDVLLSQCHGK
Trigger: TTTACCATGACACTGGCTCAGCAGCACGTCTTGGCACTTCATGCAATCTCCAGATGGGTGCTGAGTATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000485034.1
CDS CCA 72 bp GGGAAATACGGTTTCCAAGCCAAATGGACATTCGCCTaGGAGAATGACAACCCTCCTCTCCCAAAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: GKYGFQAKWTFA*ENDNPPLPKFF
Trigger: GAAGAACTTTGGGAGAGGAGGGTTGTCATTCTCCCAGGCGAATGTCCATTTGGCTTGGAAACCGTATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5
CDS CCA 72 bp GCACCTCTAAAAGGGAAATACGGTTTCCAAGCCAAATaGACATTCGCCTGGGAGAATGACAACCCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: APLKGKYGFQAK*TFAWENDNPPL
Trigger: GAGAGGAGGGTTGTCATTCTCCCAGGCGAATGTCCATTTGGCTTGGAAACCGTATTTCCCTTTTAGAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464499.5
ENST00000571487.5