Pregenerated sensors for FCN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000160339Ensembl transcript IDs: ENST00000291744.11, ENST00000350339.3
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCCCAACCAACTATGTGTaGAGGCGTCCTGACCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SRHVFLLQTVGPSSQPYPPTNYV*RRPDPE Trigger: CTCAGGGTCAGGACGCCTCCACACATAGTTGGTTGG...GGGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCCAACCAACTATGTGTaGAGGCGTCCTGACCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: FRITTCVSFTNRRAKLPTPTNYV*RRPDPE Trigger: CTCAGGGTCAGGACGCCTCCACACATAGTTGGTTGG...GGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR CCA 90 bp | TCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCCCTGTCAGGCACGGCTaGGGCTCCCCAGGTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SRHVFLLQTVGPSSQPYPPVRHG*GSPGAP Trigger: CGGAGCACCTGGGGAGCCCCAGCCGTGCCTGACAGG...GGGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | TCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCCAGGTGTCTGCCGCCTaGAGAGCCCAGGCCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: SRHVFLLQTVGPSSQPYPQVSAA*RAQAMP Trigger: GGGCATGGCCTGGGCTCTCCAGGCGGCAGACACCTG...GGGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | TCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCCCCCAGGTGCTCCGTTaGGCCCAGGTGGTCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SRHVFLLQTVGPSSQPYPPQVLR*AQVVLP Trigger: AGGCAGGACCACCTGGGCCCAACGGAGCACCTGGGG...GGGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGA 59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | TCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCACCCTGAGGCCGGCCTaGGCTAGGCAGGTCGCACCT | + |
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Preference number: 4 (lower is better) Translates to: SRHVFLLQTVGPSSQPYPTLRPA*ARQVAP Trigger: AGGTGCGACCTGCCTAGCCCAGGCCGGCCTCAGGGT...GGGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | TCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCTCCGTTGGGCCCAGGTaGTCCTGCCTTCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SRHVFLLQTVGPSSQPYPSVGPR*SCLPRR Trigger: CCTCCTGGGAAGGCAGGACCACCTGGGCCCAACGGA...GGGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR GCA 90 bp | ATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCTCCTGGACAGGTGTCTaGCGCCTGGAGAGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ITTCVSFTNRRAKLPTLPSWTGV*RLESPG Trigger: GCCTGGGCTCTCCAGGCGGCAGACACCTGTCCAGGA...GGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | ATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCTCCGTTGGGCCCAGGTaGTCCTGCCTTCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ITTCVSFTNRRAKLPTLPSVGPR*SCLPRR Trigger: CCTCCTGGGAAGGCAGGACCACCTGGGCCCAACGGA...GGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | ATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCGGGGCCACGTTCTCCTaGACAGGTGTCTGCCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ITTCVSFTNRRAKLPTLPGATFS*TGVCRL Trigger: CAGGCGGCAGACACCTGTCCAGGAGAACGTGGCCCC...GGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350339.3 |
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| CDS-3UTR GCA 90 bp | GAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACGGGAATCTCCCGCACTaGCCTCCACGAAGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ESRHVFLLQTVGPSSQPYGNLPH*PPRRPP Trigger: TGGGGGCCTTCGTGGAGGGCAGTGCGGGAGATTCCC...GTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | TTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCCAGGTGTCTGCCGCCTaGAGAGCCCAGGCCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: LESRHVFLLQTVGPSSQPQVSAA*RAQAMP Trigger: GGGCATGGCCTGGGCTCTCCAGGCGGCAGACACCTG...GGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR CCA 90 bp | AGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCAGGTGCTCCGTTaGGCCCAGGTGGTCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RITTCVSFTNRRAKLPTLPQVLR*AQVVLP Trigger: AGGCAGGACCACCTGGGCCCAACGGAGCACCTGGGG...TAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | ATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCCATCCACCCTCCGCTaGAAAACGGTCCAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: ITTCVSFTNRRAKLPTLPPSTLR*KTVQPP Trigger: AGGGGGCTGGACCGTTTTCCAGCGGAGGGTGGATGG...GGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | GAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACAGCTCGCTGGTTCCCTaGGCGGTCAGGGCGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: ESRHVFLLQTVGPSSQPYSSLVP*AVRAWM Trigger: CATCCACGCCCTGACCGCCCAGGGAACCAGCGAGCT...GTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | AGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTAACCCTGAGGCCGGCCTaGGCTAGGCAGGTCGCACCT | + |
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Preference number: 4 (lower is better) Translates to: RITTCVSFTNRRAKLPTLTLRPA*ARQVAP Trigger: AGGTGCGACCTGCCTAGCCCAGGCCGGCCTCAGGGT...TAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | GAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCATCCACCCTCCGCTaGAAAACGGTCCAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: ESRHVFLLQTVGPSSQPYPSTLR*KTVQPP Trigger: AGGGGGCTGGACCGTTTTCCAGCGGAGGGTGGATGG...GTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | AGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTAAGCTCGCTGGTTCCCTaGGCGGTCAGGGCGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: RITTCVSFTNRRAKLPTLSSLVP*AVRAWM Trigger: CATCCACGCCCTGACCGCCCAGGGAACCAGCGAGCT...TAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | AGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACTACACGGAGCTCGCTaGTTCCCTGGGCGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RITTCVSFTNRRAKLPTLLHGAR*FPGRSG Trigger: CCCTGACCGCCCAGGGAACCAGCGAGCTCCGTGTAG...TAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR GCA 90 bp | TTTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTCTGGACAGGTGTCTaGCGCCTGGAGAGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FRITTCVSFTNRRAKLPTLWTGV*RLESPG Trigger: GCCTGGGCTCTCCAGGCGGCAGACACCTGTCCAGAG...GGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR CCA 90 bp | TTTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACACGGAGCTCGCTaGTTCCCTGGGCGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FRITTCVSFTNRRAKLPTLHGAR*FPGRSG Trigger: CCCTGACCGCCCAGGGAACCAGCGAGCTCCGTGTAG...GGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR TCA 90 bp | TTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTGCCATGAGTCCCCCTaGGGTAGCGACCATTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LESRHVFLLQTVGPSSQPCHESP*GSDHSG Trigger: ACCTGAATGGTCGCTACCTCAGGGGGACTCATGGCA...GGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR CCA 90 bp | TTTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCACCATCTTCACCTCTaGACAGGTGTCTGCCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: FRITTCVSFTNRRAKLPTHHLHL*TGVCRL Trigger: CAGGCGGCAGACACCTGTCCAGAGGTGAAGATGGTG...GGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR CCA 90 bp | ATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCAAGGACTGGTTGTTGTaGAACGTCAGGGAATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ITTCVSFTNRRAKLPTLPKDWLL*NVRESP Trigger: GGGAGATTCCCTGACGTTCCACAACAACCAGTCCTT...GGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR TCA 90 bp | TCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCTACCACCAAGCTCCCTaGAACATCACAGCACAATTT | + |
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Preference number: 4 (lower is better) Translates to: SRHVFLLQTVGPSSQPYPYHQAP*NITAQF Trigger: AAATTGTGCTGTGATGTTTCAGGGAGCTTGGTGGTA...GGGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR TCA 90 bp | ATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCTACCACCAAGCTCCCTaGAACATCACAGCACAATTT | + |
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Preference number: 4 (lower is better) Translates to: ITTCVSFTNRRAKLPTLPYHQAP*NITAQF Trigger: AAATTGTGCTGTGATGTTTCAGGGAGCTTGGTGGTA...GGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CCA 90 bp | AGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTAAAGGACTGGTTGTTGTaGAACGTCAGGGAATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RITTCVSFTNRRAKLPTLKDWLL*NVRESP Trigger: GGGAGATTCCCTGACGTTCCACAACAACCAGTCCTT...TAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR TCA 90 bp | TTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCGCGACCATTCAGGTTTaGCACATGGCAGTTTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LESRHVFLLQTVGPSSQPATIQV*HMAVFV Trigger: TACAAAAACTGCCATGTGTCAAACCTGAATGGTCGC...GGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR TCA 90 bp | AGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTAGCGACCATTCAGGTTTaGCACATGGCAGTTTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: RITTCVSFTNRRAKLPTLATIQV*HMAVFV Trigger: TACAAAAACTGCCATGTGTCAAACCTGAATGGTCGC...TAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS GCA 90 bp | CACGTTCTCCTGGACAGGTGTCTGCCGCCTGGAGAGCCCAGGCCATaGCCAGGAAAGAGAGCAGCAGGGTGGCAGCGCCCAGGACCCCCA | + |
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Preference number: 5 (lower is better) Translates to: HVLLDRCLPPGEPRP*PGKRAAGWQRPGPP Trigger: TGGGGGTCCTGGGCGCTGCCACCCTGCTGCTCTCTTTCCTGGGCATGGCCTGGGCTCTCCAGGCGGCAGACACCTGTCCAGGAGAACGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000350339.3 |
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| CDS GCA 90 bp | TCTTCACCTCTGGACAGGTGTCTGCCGCCTGGAGAGCCCAGGCCATaGCCAGGAAAGAGAGCAGCAGGGTGGCAGCGCCCAGGACCCCCA | + |
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Preference number: 5 (lower is better) Translates to: SSPLDRCLPPGEPRP*PGKRAAGWQRPGPP Trigger: TGGGGGTCCTGGGCGCTGCCACCCTGCTGCTCTCTTTCCTGGGCATGGCCTGGGCTCTCCAGGCGGCAGACACCTGTCCAGAGGTGAAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS CCA 90 bp | CCGCCTGGAGAGCCCAGGCCATGCCCAGGAAAGAGAGCAGCAGGGTaGCAGCGCCCAGGACCCCCACAGCTCTGTCCAGCTCCATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: PPGEPRPCPGKRAAG*QRPGPPQLCPAPSL Trigger: AAGAGATGGAGCTGGACAGAGCTGTGGGGGTCCTGGGCGCTGCCACCCTGCTGCTCTCTTTCCTGGGCATGGCCTGGGCTCTCCAGGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CAA 90 bp | TTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTCCCCAGGTGCTCCGTaGGGCCCAGGTGGTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LESRHVFLLQTVGPSSQPSPGAP*GPGGPA Trigger: GGCAGGACCACCTGGGCCCAACGGAGCACCTGGGGA...GGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR CAA 90 bp | AGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTATCCCCAGGTGCTCCGTaGGGCCCAGGTGGTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RITTCVSFTNRRAKLPTLSPGAP*GPGGPA Trigger: GGCAGGACCACCTGGGCCCAACGGAGCACCTGGGGA...TAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CAA 90 bp | ATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCGCCCCCAGGACCAGATaGTACTTCTCCGCCTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: ITTCVSFTNRRAKLPTLPAPRTR*YFSASS Trigger: CGACGAGGCGGAGAAGTACAATCTGGTCCTGGGGGC...GGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CAA 90 bp | TTTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCGCCCCCAGGACCAGATaGTACTTCTCCGCCTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: FRITTCVSFTNRRAKLPTAPRTR*YFSASS Trigger: CGACGAGGCGGAGAAGTACAATCTGGTCCTGGGGGC...GGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR CAA 90 bp | TCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCCGAGAAGGACTGGTTGTaGTGGAACGTCAGGGAATCT | + |
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Preference number: 5 (lower is better) Translates to: SRHVFLLQTVGPSSQPYPEKDWL*WNVRES Trigger: AGATTCCCTGACGTTCCACAACAACCAGTCCTTCTC...GGGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CAA 90 bp | TTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCCCGGTGTTAAGATCATaGTCCTGGTCTTTGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LESRHVFLLQTVGPSSQPPVLRS*SWSLVE Trigger: CTCCACCAAAGACCAGGACAATGATCTTAACACCGG...GGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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| CDS-3UTR CAA 90 bp | AGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCGGTGTTAAGATCATaGTCCTGGTCTTTGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: RITTCVSFTNRRAKLPTLPVLRS*SWSLVE Trigger: CTCCACCAAAGACCAGGACAATGATCTTAACACCGG...TAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CAA 90 bp | ATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCCTACCCAGCGACCATTCAGGTTaGACACATGGCAGTTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: ITTCVSFTNRRAKLPTLPSDHSG*THGSFC Trigger: ACAAAAACTGCCATGTGTCAAACCTGAATGGTCGCT...GGGTAGGGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000291744.11 ENST00000350339.3 |
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| CDS-3UTR CAA 90 bp | TTTAGAATCACGACATGTGTTTCTTTTACAAACCGTAGGGCCAAGCTCCCAACCAGCGACCATTCAGGTTaGACACATGGCAGTTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: FRITTCVSFTNRRAKLPTSDHSG*THGSFC Trigger: ACAAAAACTGCCATGTGTCAAACCTGAATGGTCGCT...GGTTGGGAGCTTGGCCCTACGGTTTGTAAAAGAAACACATGTCGTGATTCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291744.11 |
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