RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000085265

Ensembl transcript IDs: ENST00000371806.4, ENST00000616356.4

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCTTGTGCAGCTTTTCCCACTGAGGTCCGCGGTCCCCTCTAGCTaGGGTCTGTGTGTGGGAGGAAGGCCTCTTCGGAATCTTCTCTGT +
Preference number: 1 (lower is better)
Translates to: SLVQLFPLRSAVPSS*GLCVGGRPLRNLLC
Trigger: ACAGAGAAGATTCCGAAGAGGCCTTCCTCCCACACACAGACCTCAGCTAGAGGGGACCGCGGACCTCAGTGGGAAAAGCTGCACAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 90 bp GAATGCCCAAATGTTGCTGGATGGGCCCACGCCTACACTCCTACTTaGGAGGTCCCATGGCCAGGAAGAAGAGCACTGGCCCAAGAGGAG +
Preference number: 1 (lower is better)
Translates to: ECPNVAGWAHAYTPT*EVPWPGRRALAQEE
Trigger: CTCCTCTTGGGCCAGTGCTCTTCTTCCTGGCCATGGGACCTCTCAAGTAGGAGTGTAGGCGTGGGCCCATCCAGCAACATTTGGGCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR TCA 90 bp TCCTGGCCATGCTCCCTGGTACACATGACGGCCATATCCAGGCCCTaGTGTGGGACTGGCAGGTTAGAGGACTGTGTGTCTTCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: SWPCSLVHMTAISRP*CGTGRLEDCVSSSP
Trigger: TGGAGAAGAAGACACACAGTCCTCTAACCTGCCAGTCCCACATCAGGGCCTGGATATGGCCGTCATGTGTACCAGGGAGCATGGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 90 bp GCCATGCTCCCTGGTACACATGACGGCCATATCCAGGCCCTGATGTaGGACTGGCAGGTTAGAGGACTGTGTGTCTTCTTCTCCAACAGT +
Preference number: 1 (lower is better)
Translates to: AMLPGTHDGHIQALM*DWQVRGLCVFFSNS
Trigger: ACTGTTGGAGAAGAAGACACACAGTCCTCTAACCTGCCAGTCCCACATCAGGGCCTGGATATGGCCGTCATGTGTACCAGGGAGCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 90 bp TGTGTGGGAGGAAGGCCTCTTCGGAATCTTCTCTGTGCAGGTGGCTaGCCAGGCGCTCACTTAGTGAGTGCTAAGTGTTTATCTCTTCCC +
Preference number: 1 (lower is better)
Translates to: CVGGRPLRNLLCAGG*PGAHLVSAKCLSLP
Trigger: GGGAAGAGATAAACACTTAGCACTCACTAAGTGAGCGCCTGGTCAGCCACCTGCACAGAGAAGATTCCGAAGAGGCCTTCCTCCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CCA 90 bp ACAGAAACAACACTATGTGGATGTCCACGAATGCCCAAATGTTGCTaGATGGGCCCACGCCTACACTCCTACTTGAGAGGTCCCATGGCC +
Preference number: 1 (lower is better)
Translates to: TETTLCGCPRMPKCC*MGPRLHSYLRGPMA
Trigger: GGCCATGGGACCTCTCAAGTAGGAGTGTAGGCGTGGGCCCATCCAGCAACATTTGGGCATTCGTGGACATCCACATAGTGTTGTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR GCA 90 bp AACAAACATCCTTACAATCACCACCTGGGTCAAGAAACAGAGCATTaGCAGAACCCCAGAGGCTTGTCCCTGTCCCTTCCCAGTCACCAT +
Preference number: 1 (lower is better)
Translates to: NKHPYNHHLGQETEH*QNPRGLSLSLPSHH
Trigger: ATGGTGACTGGGAAGGGACAGGGACAAGCCTCTGGGGTTCTGGCAATGCTCTGTTTCTTGACCCAGGTGGTGATTGTAAGGATGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR GCA 90 bp AGAACAGAAACAACACTATGTGGATGTCCACGAATGCCCAAATGTTaGTGGATGGGCCCACGCCTACACTCCTACTTGAGAGGTCCCATG +
Preference number: 1 (lower is better)
Translates to: RTETTLCGCPRMPKC*WMGPRLHSYLRGPM
Trigger: CATGGGACCTCTCAAGTAGGAGTGTAGGCGTGGGCCCATCCAGCAACATTTGGGCATTCGTGGACATCCACATAGTGTTGTTTCTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CCA 90 bp ATGGGCTACAAGGACCTCTCCTTACAGGTATTGAGTCAAGAACACTaGGCATCAGTGGAGGATGTGCCTGTAGCTCATGTTCCTGGATCC +
Preference number: 1 (lower is better)
Translates to: MGYKDLSLQVLSQEH*ASVEDVPVAHVPGS
Trigger: GGATCCAGGAACATGAGCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGAGGTCCTTGTAGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 90 bp CTCTTCCTGATGGGTATGTCGGCTGATTCCAGTTTGGTGCTATGGTaGGTATTTGGCTGTAAAGATTCCTGGCCATGCTCCCTGGTACAC +
Preference number: 1 (lower is better)
Translates to: LFLMGMSADSSLVLW*VFGCKDSWPCSLVH
Trigger: GTGTACCAGGGAGCATGGCCAGGAATCTTTACAGCCAAATACTCACCATAGCACCAAACTGGAATCAGCCGACATACCCATCAGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 90 bp GCAAAAGAGACTTTGCTGATGTGGTTAGGGATAGAGACCTGGACATaGGAGAGGATCCCAGATCATCCAGGTAGGCCTAGTCTAATCCCA +
Preference number: 1 (lower is better)
Translates to: AKETLLMWLGIETWT*ERIPDHPGRPSLIP
Trigger: TGGGATTAGACTAGGCCTACCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATCAGCAAAGTCTCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 90 bp TCCATGGCAAAAGAGACTTTGCTGATGTGGTTAGGGATAGAGACCTaGACATGGGAGAGGATCCCAGATCATCCAGGTAGGCCTAGTCTA +
Preference number: 1 (lower is better)
Translates to: SMAKETLLMWLGIET*TWERIPDHPGRPSL
Trigger: TAGACTAGGCCTACCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATCAGCAAAGTCTCTTTTGCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 90 bp CAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTGATGTaGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCAT +
Preference number: 1 (lower is better)
Translates to: QSLQIPSMAKETLLM*LGIETWTWERIPDH
Trigger: ATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATCAGCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 90 bp TGGGACTGGCAGGTTAGAGGACTGTGTGTCTTCTTCTCCAACAGTTaGTGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCGCATTGT +
Preference number: 1 (lower is better)
Translates to: WDWQVRGLCVFFSNS*CQAIFQVGSINSHC
Trigger: ACAATGCGAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGACACACAGTCCTCTAACCTGCCAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 90 bp GCCGCAGTGACTCCTTTGGGTGCTGATTTGCATTTCTCTGGTAAGTaGAAAGTGGAGCACTTTTTGATAAATACCTTGCTCCCCTGCATG +
Preference number: 1 (lower is better)
Translates to: AAVTPLGADLHFSGK*KVEHFLINTLLPCM
Trigger: CATGCAGGGGAGCAAGGTATTTATCAAAAAGTGCTCCACTTTTCACTTACCAGAGAAATGCAAATCAGCACCCAAAGGAGTCACTGCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 90 bp CTATCCATCTTTCTAACTTCTGAGGCTCAGATGAGGGTGCCGCAGTaGCTCCTTTGGGTGCTGATTTGCATTTCTCTGGTAAGTGAAAAG +
Preference number: 1 (lower is better)
Translates to: LSIFLTSEAQMRVPQ*LLWVLICISLVSEK
Trigger: CTTTTCACTTACCAGAGAAATGCAAATCAGCACCCAAAGGAGTCACTGCGGCACCCTCATCTGAGCCTCAGAAGTTAGAAAGATGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 90 bp TCTTGCAGGACTTTAAATAAATGTATCATAGCATGGCGGCAAGAATaGCATAAAAAGCAGAAGGGAGTGAATGTAGTTAGAGGTGTTTCA +
Preference number: 1 (lower is better)
Translates to: SCRTLNKCIIAWRQE*HKKQKGVNVVRGVS
Trigger: TGAAACACCTCTAACTACATTCACTCCCTTCTGCTTTTTATGCCATTCTTGCCGCCATGCTATGATACATTTATTTAAAGTCCTGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGGCTGGGGAAATGGGGTaGCTTCCACGACGCAGCGCT +
Preference number: 2 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRAGEMG*LPRRSA
Trigger: AGCGCTGCGTCGTGGAAGTCACCCCATTTCCCCAGC...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CAA 90 bp CACCACCTGGGTCAAGAAACAGAGCATTGCCAGAACCCCAGAGGCTaGTCCCTGTCCCTTCCCAGTCACCATGTGGTCCCACCCTCAAAT +
Preference number: 2 (lower is better)
Translates to: HHLGQETEHCQNPRG*SLSLPSHHVVPPSN
Trigger: ATTTGAGGGTGGGACCACATGGTGACTGGGAAGGGACAGGGACAAGCCTCTGGGGTTCTGGCAATGCTCTGTTTCTTGACCCAGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGTGGTGCTGCTGGCTTTaGGGTTGGGGGAAGGAGTCC +
Preference number: 2 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRWCCWL*GWGKES
Trigger: GGACTCCTTCCCCCAACCCCAAAGCCAGCAGCACCA...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGTTGTGTGCCGCACGTTaGTTCTGCCCCTCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRLCAAR*FCPSGL
Trigger: AAGGCCAGAGGGGCAGAATCAACGTGCGGCACACAA...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCCCTGCCCCCACCACTaGCCCGCCAAAAATGTCCTG +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSPCPHH*PAKNVL
Trigger: CAGGACATTTTTGGCGGGGCAGTGGTGGGGGCAGGG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGGCAGAATAATTCCCTaGCCCCACCACTGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSGRIIP*PHHCPA
Trigger: GGCGGGGCAGTGGTGGGGGCAGGGAATTATTCTGCC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGGGGAGTGTGTCTGGCTaGGGAAATGGGGTGACTTCC +
Preference number: 2 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRGSVSG*GNGVTS
Trigger: GGAAGTCACCCCATTTCCCCAGCCAGACACACTCCC...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGCTGAGGTCTGTGTGTaGGAGGAAGGCCTCTTCGGA +
Preference number: 2 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSAEVCV*EEGLFG
Trigger: TCCGAAGAGGCCTTCCTCCCACACACAGACCTCAGC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCCCTGGCCTGGGAGCTaGAGAAGCCCCTTCTCCATC +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSPWPGS*RSPFSI
Trigger: GATGGAGAAGGGGCTTCTCCAGCTCCCAGGCCAGGG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAATGTGGCGGCTTGACTaGGCTGGGGGCAAAGGGGCA +
Preference number: 2 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVMWRLD*AGGKGA
Trigger: TGCCCCTTTGCCCCCAGCTCAGTCAAGCCGCCACAT...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCTCTGTGCAGGTGGCTaGCCAGGCGCTCACTTAGTG +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSLCAGG*PGAHLV
Trigger: CACTAAGTGAGCGCCTGGTCAGCCACCTGCACAGAG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAAGGAGTCCGGGCCAATaGATGCCAGTGACCCCTGGG +
Preference number: 2 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVRSPGQ*MPVTPG
Trigger: CCCAGGGGTCACTGGCATTCATTGGCCCGGACTCCT...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGAGAGGGGACAACGGATaGAGGGTCAGAGAGATGTGG +
Preference number: 2 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRRGDNG*RVREMW
Trigger: CCACATCTCTCTGACCCTTCATCCGTTGTCCCCTCT...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACTGAGTCCTGCCTGCTaGCCCAGTAAGGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVLSPAC*PSKAQG
Trigger: TCCCTGGGCCTTACTGGGCCAGCAGGCAGGACTCAG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGAGGGTCAGAGAGATGTaGTGCTGCTGGCTTTGGGGT +
Preference number: 2 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRRVREM*CCWLWG
Trigger: ACCCCAAAGCCAGCAGCACCACATCTCTCTGACCCT...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CAA 90 bp TCTGGTCAGCCCCCAATGGGCTACAAGGACCTCTCCTTACAGGTATaGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: SGQPPMGYKDLSLQV*SQEHWASVEDVPVA
Trigger: AGCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGAGGTCCTTGTAGCCCATTGGGGGCTGACCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCCTGAGTCCTGCCTGCTaGCCCAGTAAGGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAALSPAC*PSKAQG
Trigger: TCCCTGGGCCTTACTGGGCCAGCAGGCAGGACTCAG...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCCCCTGGCCTGGGAGCTaGAGAAGCCCCTTCTCCATC +
Preference number: 2 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFPWPGS*RSPFSI
Trigger: GATGGAGAAGGGGCTTCTCCAGCTCCCAGGCCAGGG...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCTTGAGAAATCTCCCCTaGCCTGGGAGCTGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSLRNLP*PGSWRS
Trigger: GCTTCTCCAGCTCCCAGGCCAGGGGAGATTTCTCAA...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGTTGATTCTGCCCCTCTaGCCTTCCTTTGGTTCCCTT +
Preference number: 2 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRLILPL*PSFGSL
Trigger: AAGGGAACCAAAGGAAGGCCAGAGGGGCAGAATCAA...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTATCTCCCCTAGAACCCTaGAAGGAGCCACCACTGCTG +
Preference number: 2 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVSPLEP*KEPPLL
Trigger: CAGCAGTGGTGGCTCCTTCCAGGGTTCTAGGGGAGA...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGCCCTGATGTGGGACTaGCAGGTTAGAGGACTGTGT +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSALMWD*QVRGLC
Trigger: ACACAGTCCTCTAACCTGCCAGTCCCACATCAGGGC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCTTGTGTGCCGCACGTTaGTTCTGCCCCTCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAALCAAR*FCPSGL
Trigger: AAGGCCAGAGGGGCAGAATCAACGTGCGGCACACAA...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCCTAGTCTAATCCCATaGGTCTCAGGAGTGGAGACC +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSPSLIP*VSGVET
Trigger: GGTCTCCACTCCTGAGACTCATGGGATTAGACTAGG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCTCCCCACTAGCAGGTaGATGTGGAGGGGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSILPTSR*MWRGPG
Trigger: GCCAGGACCCCTCCACATGCACCTGCTAGTGGGGAG...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR GCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCTCGGAATCTTCTCTGTaGAGGTGGCTGACCAGGCGC +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAASESSL*RWLTRR
Trigger: GCGCCTGGTCAGCCACCTGCACAGAGAAGATTCCGA...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGATGCTTCTTAGGTCGTaGTTGAGAAATCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRMLLRS*LRNLPW
Trigger: CCAGGGGAGATTTCTCAACCACGACCTAAGAAGCAT...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCCTGATGTGGGACTaGCAGGTTAGAGGACTGTGT +
Preference number: 2 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVALMWD*QVRGLC
Trigger: ACACAGTCCTCTAACCTGCCAGTCCCACATCAGGGC...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGGGGCATGTGGCGGCTTaGCTGAGCTGGGGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVGHVAA*LSWGQR
Trigger: CCTTTGCCCCCAGCTCAGTCAAGCCGCCACATGCCC...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCGCTTGGGGGTGGAGGTaGGGATCGCCCTGTGTCAAT +
Preference number: 2 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCAWGWR*GSPCVN
Trigger: ATTGACACAGGGCGATCCTCACCTCCACCCCCAAGC...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGAGGAGCCACCACTGCTaGGTCCTGCCTGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVRSHHC*VLPAGP
Trigger: TGGGCCAGCAGGCAGGACTCAGCAGTGGTGGCTCCT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTTCCAGGGAAAGACCTaGCGTGCAACAGACACAGGA +
Preference number: 2 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFFQGKT*RATDTG
Trigger: TCCTGTGTCTGTTGCACGGCAGGTCTTTCCCTGGAA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCTTGAGAAATCTCCCCTaGCCTGGGAGCTGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAALRNLP*PGSWRS
Trigger: GCTTCTCCAGCTCCCAGGCCAGGGGAGATTTCTCAA...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCCTTTTTCAAGAAGTGTaGAGTGTTGTGAGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSLFQEV*SVVSEA
Trigger: TGCCTCACTCACAACACTTCACACTTCTTGAAAAAG...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGAGGAGTCCGGGCCAATaGATGCCAGTGACCCCTGGG +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVRSPGQ*MPVTPG
Trigger: CCCAGGGGTCACTGGCATTCATTGGCCCGGACTCCT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACCAAAGCATGAACTCTaGCGTGGTGGGAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVPKHEL*RGGKQK
Trigger: TTTCTGCTTCCCACCACGGCAGAGTTCATGCTTTGG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCTCATGGGAGTGTGTCTaGCTGGGGAAATGGGGTGAC +
Preference number: 2 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFSWECV*LGKWGD
Trigger: GTCACCCCATTTCCCCAGCCAGACACACTCCCATGA...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCCATCTTTCTAACTTCTaGGGCTCAGATGAGGGTGCC +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAHLSNF*GSDEGA
Trigger: GGCACCCTCATCTGAGCCTCAGAAGTTAGAAAGATG...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCTTCTTCTCCAACAGTTaGTGCCAAGCCATTTTCCAG +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSFFSNS*CQAIFQ
Trigger: CTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAA...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCACAAAGTCAGAGCCTaGAAATACCTTCCATGGCAA +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSHKVRA*KYLPWQ
Trigger: TTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGGGCAGAATAATTCCCTaGCCCCACCACTGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKGRIIP*PHHCPA
Trigger: GGCGGGGCAGTGGTGGGGGCAGGGAATTATTCTGCC...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR GCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCAATACCTTGCTCCCCTaGATGTCATCTTCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSNTLLP*MSSSVK
Trigger: CTTCACAGAAGATGACATGCAGGGGAGCAAGGTATT...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGTTACTAGCAGTGTATaGAAATCTCCCTCCCACAGT +
Preference number: 2 (lower is better)
Translates to: LTGIESRTLGISGGCACSVTSSV*KSPSHS
Trigger: ACTGTGGGAGGGAGATTTGCATACACTGCTAGTAAC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTACCTCTGGTGAGGTTGTaGGCATGTGGCGGCTTGACT +
Preference number: 2 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLPLVRL*ACGGLT
Trigger: AGTCAAGCCGCCACATGCCCACAACCTCACCAGAGG...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTTCTTCTCTGTGCAGGTaGCTGACCAGGCGCTCACTT +
Preference number: 2 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSISSLCR*LTRRSL
Trigger: AAGTGAGCGCCTGGTCAGCCACCTGCACAGAGAAGA...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCGTCACTCAACCTCCCTaGACATCGGTAGTGCCATCT +
Preference number: 2 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCVTQPP*TSVVPS
Trigger: AGATGGCACTACCGATGTTCAGGGAGGTTGAGTGAC...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAAGGTGGAGGTTGCAGTaGGCTAAGGTCATACCGCTG +
Preference number: 2 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLRWRLQ*AKVIPL
Trigger: CAGCGGTATGACCTTAGCTCACTGCAACCTCCACCT...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR GCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCGGGAAAGACCTGCCGTaGAACAGACACAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCGKDLP*NRHRKV
Trigger: CACTTTCCTGTGTCTGTTGCACGGCAGGTCTTTCCC...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR GCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAGTCAGAGAGATGTGGTaGTGCTGGCTTTGGGGTTGG +
Preference number: 2 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLVREMW*CWLWGW
Trigger: CCAACCCCAAAGCCAGCAGCACCACATCTCTCTGAC...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR GCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAAATACCTTGCTCCCCTaGATGTCATCTTCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVNTLLP*MSSSVK
Trigger: CTTCACAGAAGATGACATGCAGGGGAGCAAGGTATT...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGGTCTGGCTGGGGAAATaGGGTGACTTCCACGACGCA +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVVWLGK*GDFHDA
Trigger: TGCGTCGTGGAAGTCACCCCATTTCCCCAGCCAGAC...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCCCCTGTGTCAATTACTaGAGGTGGAAAATCCTCGCA +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAPCVNY*RWKILA
Trigger: TGCGAGGATTTTCCACCTCCAGTAATTGACACAGGG...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCTGGTCAGCCCCCAATaGGCTACAAGGACCTCTCCT +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLVSPQ*ATRTSP
Trigger: AGGAGAGGTCCTTGTAGCCCATTGGGGGCTGACCAG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCTTGCCACATTCCCTTTaGTGCTTCTTAGGTCGTGGT +
Preference number: 2 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFLPHSL*CFLGRG
Trigger: ACCACGACCTAAGAAGCATCAAAGGGAATGTGGCAA...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGAGAGGGGACAACGGATaGAGGGTCAGAGAGATGTGG +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVRGDNG*RVREMW
Trigger: CCACATCTCTCTGACCCTTCATCCGTTGTCCCCTCT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR GCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACTGATTCCAGTTTGGTaGTATGGTGAGTATTTGGCT +
Preference number: 2 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVLIPVW*YGEYLA
Trigger: AGCCAAATACTCACCATAGCACCAAACTGGAATCAG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCCGGCTGATTCCAGTTTaGTGCTATGGTGAGTATTTG +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAARLIPV*CYGEYL
Trigger: CAAATACTCACCATAGCACCAAACTGGAATCAGCCG...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAGTAATCTCAGCAATTTaGGAGGCAGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLVISAI*EAEAGG
Trigger: TCCACCCGCCTCTGCCTCCCAAATTGCTGAGATTAC...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR GCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAGTGGATGTCCACGAATaGCCAAATGTTGCTGGATGG +
Preference number: 2 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLVDVHE*PNVAGW
Trigger: CCATCCAGCAACATTTGGGCATTCGTGGACATCCAC...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTATGCTTCTTAGGTCGTaGTTGAGAAATCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIMLLRS*LRNLPW
Trigger: CCAGGGGAGATTTCTCAACCACGACCTAAGAAGCAT...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCAGCCATTTTCCAGGTTaGTTCCATCAATTCGCATTG +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAASHFPG*FHQFAL
Trigger: CAATGCGAATTGATGGAACCAACCTGGAAAATGGCT...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTTTCTGGACCCCAAAGTaGCCTTTTTCAAGAAGTGTG +
Preference number: 2 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIFWTPK*PFSRSV
Trigger: CACACTTCTTGAAAAAGGTCACTTTGGGGTCCAGAA...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTATTGCCACATTCCCTTTaGTGCTTCTTAGGTCGTGGT +
Preference number: 2 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLLPHSL*CFLGRG
Trigger: ACCACGACCTAAGAAGCATCAAAGGGAATGTGGCAA...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGCCTAGTCTAATCCCATaGGTCTCAGGAGTGGAGACC +
Preference number: 2 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKPSLIP*VSGVET
Trigger: GGTCTCCACTCCTGAGACTCATGGGATTAGACTAGG...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCAGTTTGGTGCTATGGTaGGTATTTGGCTGTAAAGAT +
Preference number: 2 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAASLVLW*VFGCKD
Trigger: ATCTTTACAGCCAAATACTCACCATAGCACCAAACT...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR TCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGACTCCTGATCTCAAGTaGTCCACCCACTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKTPDLK*STHFSL
Trigger: GAGGCTGAAGTGGGTGGATCACTTGAGATCAGGAGT...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGAAAGATTCCTGGCCATaGTCCCTGGTACACATGACG +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVKDSWP*SLVHMT
Trigger: CGTCATGTGTACCAGGGAGCATGGCCAGGAATCTTT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGTTGATTCTGCCCCTCTaGCCTTCCTTTGGTTCCCTT +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLILPL*PSFGSL
Trigger: AAGGGAACCAAAGGAAGGCCAGAGGGGCAGAATCAA...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAATAGAGACCTGGACATaGGAGAGGATCCCAGATCAT +
Preference number: 2 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLIETWT*ERIPDH
Trigger: ATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTAT...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGTTGCTGCCATGTTTGTaGGACTCATGCTCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLLPCL*DSCSLC
Trigger: ACACAAGGAGCATGAGTCTCACAAACATGGCAGCAA...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGGAGACTTTGCTGATGTaGTTAGGGATAGAGACCTGG +
Preference number: 2 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKETLLM*LGIETW
Trigger: CCAGGTCTCTATCCCTAACCACATCAGCAAAGTCTC...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGTGTAGCTCATGTTCCTaGATCCAAGCATGTGCAGTT +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVCSSCS*IQACAV
Trigger: AACTGCACATGCTTGGATCCAGGAACATGAGCTACA...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGTTGAGTCAAGAACACTaGGCATCAGTGGAGGATGTG +
Preference number: 2 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKLSQEH*ASVEDV
Trigger: CACATCCTCCACTGATGCCCAGTGTTCTTGACTCAA...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGACAAAAGGCATATTTTaGCCAGGCACAGTGTCTCAC +
Preference number: 2 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKTKGIF*PGTVSH
Trigger: GTGAGACACTGTGCCTGGCCAAAATATGCCTTTTGT...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCTTTGGGTGCTGATTTaGATTTCTCTGGTAAGTGAA +
Preference number: 2 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLWVLI*ISLVSE
Trigger: TTCACTTACCAGAGAAATGCAAATCAGCACCCAAAG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 72 bp AGGGGCAGCTGTGGGCGTCATGGGAGTGTGTCTGGCTaGGGAAATGGGGTGACTTCCACGACGCAGCGCTTG +
Preference number: 3 (lower is better)
Translates to: RGSCGRHGSVSG*GNGVTSTTQRL
Trigger: CAAGCGCTGCGTCGTGGAAGTCACCCCATTTCCCCAGCCAGACACACTCCCATGACGCCCACAGCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR GCA 72 bp GAACCCTGGAAGGAGCCACCACTGCTGAGTCCTGCCTaGTGGCCCAGTAAGGCCCAGGGACTCCAGATCTAC +
Preference number: 3 (lower is better)
Translates to: EPWKEPPLLSPA*WPSKAQGLQIY
Trigger: GTAGATCTGGAGTCCCTGGGCCTTACTGGGCCAGCAGGCAGGACTCAGCAGTGGTGGCTCCTTCCAGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 72 bp CAGCTTTTCCCACTGAGGTCCGCGGTCCCCTCTAGCTaGGGTCTGTGTGTGGGAGGAAGGCCTCTTCGGAAT +
Preference number: 3 (lower is better)
Translates to: QLFPLRSAVPSS*GLCVGGRPLRN
Trigger: ATTCCGAAGAGGCCTTCCTCCCACACACAGACCTCAGCTAGAGGGGACCGCGGACCTCAGTGGGAAAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 72 bp AGGGTCAGAGAGATGTGGTGCTGCTGGCTTTGGGGTTaGGGGAAGGAGTCCGGGCCAATGAATGCCAGTGAC +
Preference number: 3 (lower is better)
Translates to: RVREMWCCWLWG*GKESGPMNASD
Trigger: GTCACTGGCATTCATTGGCCCGGACTCCTTCCCCCAACCCCAAAGCCAGCAGCACCACATCTCTCTGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCTCCACGACGCAGCGCTaGTGGGTGTGGCCTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LTGIESRTLGISGGCACSSTTQR*WVWPPH
Trigger: GTGGGGAGGCCACACCCACAAGCGCTGCGTCGTGGA...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR TCA 72 bp AATGTTGCTGGATGGGCCCACGCCTACACTCCTACTTaGGAGGTCCCATGGCCAGGAAGAAGAGCACTGGCC +
Preference number: 3 (lower is better)
Translates to: NVAGWAHAYTPT*EVPWPGRRALA
Trigger: GGCCAGTGCTCTTCTTCCTGGCCATGGGACCTCTCAAGTAGGAGTGTAGGCGTGGGCCCATCCAGCAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR GCA 72 bp GTGTGTGGGAGGAAGGCCTCTTCGGAATCTTCTCTGTaGAGGTGGCTGACCAGGCGCTCACTTAGTGAGTGC +
Preference number: 3 (lower is better)
Translates to: VCGRKASSESSL*RWLTRRSLSEC
Trigger: GCACTCACTAAGTGAGCGCCTGGTCAGCCACCTGCACAGAGAAGATTCCGAAGAGGCCTTCCTCCCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR TCA 72 bp TGCTCCCTGGTACACATGACGGCCATATCCAGGCCCTaGTGTGGGACTGGCAGGTTAGAGGACTGTGTGTCT +
Preference number: 3 (lower is better)
Translates to: CSLVHMTAISRP*CGTGRLEDCVS
Trigger: AGACACACAGTCCTCTAACCTGCCAGTCCCACATCAGGGCCTGGATATGGCCGTCATGTGTACCAGGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 72 bp GCTGTAAAGATTCCTGGCCATGCTCCCTGGTACACATaGCGGCCATATCCAGGCCCTGATGTGGGACTGGCA +
Preference number: 3 (lower is better)
Translates to: AVKIPGHAPWYT*RPYPGPDVGLA
Trigger: TGCCAGTCCCACATCAGGGCCTGGATATGGCCGTCATGTGTACCAGGGAGCATGGCCAGGAATCTTTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 72 bp ATCCCAGATCATCCAGGTAGGCCTAGTCTAATCCCATaGGTCTCAGGAGTGGAGACCCTGTCCCATGGGGCT +
Preference number: 3 (lower is better)
Translates to: IPDHPGRPSLIP*VSGVETLSHGA
Trigger: AGCCCCATGGGACAGGGTCTCCACTCCTGAGACTCATGGGATTAGACTAGGCCTACCTGGATGATCTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 72 bp CCTGGTACACATGACGGCCATATCCAGGCCCTGATGTaGGACTGGCAGGTTAGAGGACTGTGTGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: PGTHDGHIQALM*DWQVRGLCVFF
Trigger: GAAGAAGACACACAGTCCTCTAACCTGCCAGTCCCACATCAGGGCCTGGATATGGCCGTCATGTGTACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTGGGCATGTGGCGGCTaGACTGAGCTGGGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFWACGG*TELGAK
Trigger: CTTTGCCCCCAGCTCAGTCAAGCCGCCACATGCCCA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CAA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACTCCCTCTGGTGAGGTaGTGGGCATGTGGCGGCTTG +
Preference number: 3 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVLPLVR*WACGGL
Trigger: CAAGCCGCCACATGCCCACAACCTCACCAGAGGGAG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR-3UTR CAA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCAGAACCCCAGAGGCTaGTCCCTGTCCCTTCCCAGT +
Preference number: 3 (lower is better)
Translates to: LTGIESRTLGISGGCACSQNPRG*SLSLPS
Trigger: ACTGGGAAGGGACAGGGACAAGCCTCTGGGGTTCTG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 72 bp TTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTaGCCTGGGAGCTGGAGAAGCCCCTTCTCCATCATC +
Preference number: 3 (lower is better)
Translates to: LMLLRSWLRNLP*PGSWRSPFSII
Trigger: GATGATGGAGAAGGGGCTTCTCCAGCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 72 bp ACACATGACGGCCATATCCAGGCCCTGATGTGGGACTaGCAGGTTAGAGGACTGTGTGTCTTCTTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: THDGHIQALMWD*QVRGLCVFFSN
Trigger: GTTGGAGAAGAAGACACACAGTCCTCTAACCTGCCAGTCCCACATCAGGGCCTGGATATGGCCGTCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCTTCTTAGGTCGTGGTaGAGAAATCTCCCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRLLRSW*RNLPWP
Trigger: AGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 72 bp GGAAGGCCTCTTCGGAATCTTCTCTGTGCAGGTGGCTaGCCAGGCGCTCACTTAGTGAGTGCTAAGTGTTTA +
Preference number: 3 (lower is better)
Translates to: GRPLRNLLCAGG*PGAHLVSAKCL
Trigger: TAAACACTTAGCACTCACTAAGTGAGCGCCTGGTCAGCCACCTGCACAGAGAAGATTCCGAAGAGGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR TCA 72 bp CCCCAATGGGCTACAAGGACCTCTCCTTACAGGTATTaGGTCAAGAACACTGGGCATCAGTGGAGGATGTGC +
Preference number: 3 (lower is better)
Translates to: PQWATRTSPYRY*VKNTGHQWRMC
Trigger: GCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGAGGTCCTTGTAGCCCATTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 72 bp ACACTATGTGGATGTCCACGAATGCCCAAATGTTGCTaGATGGGCCCACGCCTACACTCCTACTTGAGAGGT +
Preference number: 3 (lower is better)
Translates to: TLCGCPRMPKCC*MGPRLHSYLRG
Trigger: ACCTCTCAAGTAGGAGTGTAGGCGTGGGCCCATCCAGCAACATTTGGGCATTCGTGGACATCCACATAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR GCA 72 bp ACAACACTATGTGGATGTCCACGAATGCCCAAATGTTaGTGGATGGGCCCACGCCTACACTCCTACTTGAGA +
Preference number: 3 (lower is better)
Translates to: TTLCGCPRMPKC*WMGPRLHSYLR
Trigger: TCTCAAGTAGGAGTGTAGGCGTGGGCCCATCCAGCAACATTTGGGCATTCGTGGACATCCACATAGTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CCA 72 bp ACTTTGCTGATGTGGTTAGGGATAGAGACCTGGACATaGGAGAGGATCCCAGATCATCCAGGTAGGCCTAGT +
Preference number: 3 (lower is better)
Translates to: TLLMWLGIETWT*ERIPDHPGRPS
Trigger: ACTAGGCCTACCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATCAGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACTTCTTAGGTCGTGGTaGAGAAATCTCCCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVLLRSW*RNLPWP
Trigger: AGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCTTGCCACATTCCCTTaGATGCTTCTTAGGTCGTGG +
Preference number: 3 (lower is better)
Translates to: LTGIESRTLGISGGCACSLATFP*MLLRSW
Trigger: CCACGACCTAAGAAGCATCAAAGGGAATGTGGCAAG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 72 bp ACCTTTGACACTGGTGCTATCCATCTTTCTAACTTCTaGGGCTCAGATGAGGGTGCCGCAGTGACTCCTTTG +
Preference number: 3 (lower is better)
Translates to: TFDTGAIHLSNF*GSDEGAAVTPL
Trigger: CAAAGGAGTCACTGCGGCACCCTCATCTGAGCCTCAGAAGTTAGAAAGATGGATAGCACCAGTGTCAAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 72 bp TTTCTAACTTCTGAGGCTCAGATGAGGGTGCCGCAGTaGCTCCTTTGGGTGCTGATTTGCATTTCTCTGGTA +
Preference number: 3 (lower is better)
Translates to: FLTSEAQMRVPQ*LLWVLICISLV
Trigger: TACCAGAGAAATGCAAATCAGCACCCAAAGGAGTCACTGCGGCACCCTCATCTGAGCCTCAGAAGTTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 72 bp ATGGGTATGTCGGCTGATTCCAGTTTGGTGCTATGGTaGGTATTTGGCTGTAAAGATTCCTGGCCATGCTCC +
Preference number: 3 (lower is better)
Translates to: MGMSADSSLVLW*VFGCKDSWPCS
Trigger: GGAGCATGGCCAGGAATCTTTACAGCCAAATACTCACCATAGCACCAAACTGGAATCAGCCGACATACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR GCA 72 bp AAAGAACAGAAACAACACTATGTGGATGTCCACGAATaGCCAAATGTTGCTGGATGGGCCCACGCCTACACT +
Preference number: 3 (lower is better)
Translates to: KEQKQHYVDVHE*PNVAGWAHAYT
Trigger: AGTGTAGGCGTGGGCCCATCCAGCAACATTTGGGCATTCGTGGACATCCACATAGTGTTGTTTCTGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CCA 72 bp CCAGAGGCTTGTCCCTGTCCCTTCCCAGTCACCATGTaGTCCCACCCTCAAATACAATCACTTTCTTATTTT +
Preference number: 3 (lower is better)
Translates to: PEACPCPFPVTM*SHPQIQSLSYF
Trigger: AAAATAAGAAAGTGATTGTATTTGAGGGTGGGACCACATGGTGACTGGGAAGGGACAGGGACAAGCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 72 bp AAGGACCTCTCCTTACAGGTATTGAGTCAAGAACACTaGGCATCAGTGGAGGATGTGCCTGTAGCTCATGTT +
Preference number: 3 (lower is better)
Translates to: KDLSLQVLSQEH*ASVEDVPVAHV
Trigger: AACATGAGCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGAGGTCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAATAGCACATACCCTCTaGAACAGGCTCCTTTTGCTG +
Preference number: 3 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVIAHTL*NRLLLL
Trigger: CAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTAT...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCAAAGTGGAGCACTTTTaGATAAATACCTTGCTCCCC +
Preference number: 3 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAKVEHF*INTLLP
Trigger: GGGGAGCAAGGTATTTATCAAAAAGTGCTCCACTTT...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCTTGCCACATTCCCTTaGATGCTTCTTAGGTCGTGG +
Preference number: 3 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLATFP*MLLRSW
Trigger: CCACGACCTAAGAAGCATCAAAGGGAATGTGGCAAG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGTCAAGAAACAGAGCATaGCCAGAACCCCAGAGGCTT +
Preference number: 3 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVSRNRA*PEPQRL
Trigger: AAGCCTCTGGGGTTCTGGCAATGCTCTGTTTCTTGA...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CCA 72 bp CTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTaGTTCCATCAATTCGCATTGTTACTAGCAGTGTAT +
Preference number: 3 (lower is better)
Translates to: LLQQLMPSHFPG*FHQFALLLAVY
Trigger: ATACACTGCTAGTAACAATGCGAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR GCA 72 bp AAAGTGGAGCACTTTTTGATAAATACCTTGCTCCCCTaGATGTCATCTTCTGTGAAGTGTCTGTTCACATCT +
Preference number: 3 (lower is better)
Translates to: KVEHFLINTLLP*MSSSVKCLFTS
Trigger: AGATGTGAACAGACACTTCACAGAAGATGACATGCAGGGGAGCAAGGTATTTATCAAAAAGTGCTCCACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR TCA 72 bp ACTCCTTTGGGTGCTGATTTGCATTTCTCTGGTAAGTaGAAAGTGGAGCACTTTTTGATAAATACCTTGCTC +
Preference number: 3 (lower is better)
Translates to: TPLGADLHFSGK*KVEHFLINTLL
Trigger: GAGCAAGGTATTTATCAAAAAGTGCTCCACTTTTCACTTACCAGAGAAATGCAAATCAGCACCCAAAGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR-3UTR CAA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGTTTTTGATAAATACCTaGCTCCCCTGCATGTCATCT +
Preference number: 3 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKFLINT*LPCMSS
Trigger: AGATGACATGCAGGGGAGCAAGGTATTTATCAAAAA...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGGGCCCCACTGGTCCTaGCTTTCCAGGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSGPHWS*LSRGSR
Trigger: CCTGGAGCCCCTGGAAAGGCAGGACCAGTGGGGCCC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGCCCCCGGGCCATGGTaGCTCCACTCAGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSAPGPW*LHSAPC
Trigger: GCATGGAGCTGAGTGGAGCCACCATGGCCCGGGGGC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCGAGCCCCCGGGCCATaGTGGCTCCACTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRRAPGP*WLHSAP
Trigger: TGGAGCTGAGTGGAGCCACCATGGCCCGGGGGCTCG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCCCTGCCCCCACCACTaGCCCGCCAAAAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRPCPHH*PAKNVL
Trigger: CAGGACATTTTTGGCGGGGCAGTGGTGGGGGCAGGG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCTCCTCGGTCTCCTTTaGGCCCCACTGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRLLGLL*APLVLP
Trigger: AGGCAGGACCAGTGGGGCCCAAAGGAGACCGAGGAG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCCCTGGCCTGGGAGCTaGAGAAGCCCCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRPWPGS*RSPFSI
Trigger: GATGGAGAAGGGGCTTCTCCAGCTCCCAGGCCAGGG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGGGCATGTGGCGGCTTaGCTGAGCTGGGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSGHVAA*LSWGQR
Trigger: CCTTTGCCCCCAGCTCAGTCAAGCCGCCACATGCCC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGTCCTTGCAGTTGCGTaGGCCTGTCGCACACGACTG +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSVLAVA*ACRTRL
Trigger: CAGTCGTGTGCGACAGGCCCACGCAACTGCAAGGAC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGTGAGCCACCGCGCCTaGCCGCTGCTGCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSVSHRA*PLLLLL
Trigger: AAGAAGCAGCAGCAGCGGCCAGGCGCGGTGGCTCAC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGCTGGGGAAATGGGGTaGCTTCCACGACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSAGEMG*LPRRSA
Trigger: AGCGCTGCGTCGTGGAAGTCACCCCATTTCCCCAGC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGGGCATGTGGCGGCTTaGCTGAGCTGGGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVGHVAA*LSWGQR
Trigger: CCTTTGCCCCCAGCTCAGTCAAGCCGCCACATGCCC...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCTTGTGTGCCGCACGTTaGTTCTGCCCCTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSLCAAR*FCPSGL
Trigger: AAGGCCAGAGGGGCAGAATCAACGTGCGGCACACAA...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCGGGCCCCACTGGTCCTaGCTTTCCAGGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAGPHWS*LSRGSR
Trigger: CCTGGAGCCCCTGGAAAGGCAGGACCAGTGGGGCCC...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCCACCACCTTCACCTCTaGACATGTGTCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSHHLHL*TCVRSL
Trigger: CAGGCTGCGGACACATGTCCAGAGGTGAAGGTGGTG...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGGTCTGGCTGGGGAAATaGGGTGACTTCCACGACGCA +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRVWLGK*GDFHDA
Trigger: TGCGTCGTGGAAGTCACCCCATTTCCCCAGCCAGAC...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGGGAGTGTGTCTGGCTaGGGAAATGGGGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSGSVSG*GNGVTS
Trigger: GGAAGTCACCCCATTTCCCCAGCCAGACACACTCCC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGGCTGAGGTCTGTGTGTaGGAGGAAGGCCTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRAEVCV*EEGLFG
Trigger: TCCGAAGAGGCCTTCCTCCCACACACAGACCTCAGC...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTCCTGTCGCACACGACTaGGACTGCCCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFPVAHD*DCPASP
Trigger: AGGAGACGCTGGGCAGTCTCAGTCGTGTGCGACAGG...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTCCCTGCCCCCACCACTaGCCCGCCAAAAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFPCPHH*PAKNVL
Trigger: CAGGACATTTTTGGCGGGGCAGTGGTGGGGGCAGGG...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTGGCAGAATAATTCCCTaGCCCCACCACTGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFGRIIP*PHHCPA
Trigger: GGCGGGGCAGTGGTGGGGGCAGGGAATTATTCTGCC...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCCGAGCCCCCGGGCCATaGTGGCTCCACTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFRAPGP*WLHSAP
Trigger: TGGAGCTGAGTGGAGCCACCATGGCCCGGGGGCTCG...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACTCCTCGGTCTCCTTTaGGCCCCACTGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVLLGLL*APLVLP
Trigger: AGGCAGGACCAGTGGGGCCCAAAGGAGACCGAGGAG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCCATCCATCCTCCGCTaGAAAACGGTCCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSPSILR*KTVQPP
Trigger: AGGGGGCTGGACCGTTTTCCAGCGGAGGATGGATGG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCACTAGCAGGTGCATGTaGAGGGGTCCTGGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSTSRCM*RGPGPS
Trigger: AGACGGGCCAGGACCCCTCCACATGCACCTGCTAGT...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCTCATGGGAGTGTGTCTaGCTGGGGAAATGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSSWECV*LGKWGD
Trigger: GTCACCCCATTTCCCCAGCCAGACACACTCCCATGA...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACCCTGGCCTGGGAGCTaGAGAAGCCCCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVPWPGS*RSPFSI
Trigger: GATGGAGAAGGGGCTTCTCCAGCTCCCAGGCCAGGG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTCTGAGTCCTGCCTGCTaGCCCAGTAAGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFLSPAC*PSKAQG
Trigger: TCCCTGGGCCTTACTGGGCCAGCAGGCAGGACTCAG...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCAGGGTCAGAGAGATGTaGTGCTGCTGGCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSRVREM*CCWLWG
Trigger: ACCCCAAAGCCAGCAGCACCACATCTCTCTGACCCT...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGGCCCTGATGTGGGACTaGCAGGTTAGAGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRALMWD*QVRGLC
Trigger: ACACAGTCCTCTAACCTGCCAGTCCCACATCAGGGC...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGATGCCCAAATGTTGCTaGATGGGCCCACGCCTACAC +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRMPKCC*MGPRLH
Trigger: GTGTAGGCGTGGGCCCATCCAGCAACATTTGGGCAT...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CAA 72 bp CTTGCCACATTCCCTTTGATGCTTCTTAGGTCGTGGTaGAGAAATCTCCCCTGGCCTGGGAGCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LATFPLMLLRSW*RNLPWPGSWRS
Trigger: GCTTCTCCAGCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAATGTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CAA 72 bp TCCTTACAATCACCACCTGGGTCAAGAAACAGAGCATaGCCAGAACCCCAGAGGCTTGTCCCTGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLQSPPGSRNRA*PEPQRLVPVPS
Trigger: GGAAGGGACAGGGACAAGCCTCTGGGGTTCTGGCAATGCTCTGTTTCTTGACCCAGGTGGTGATTGTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCCCTGTCGCACACGACTaGGACTGCCCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAPVAHD*DCPASP
Trigger: AGGAGACGCTGGGCAGTCTCAGTCGTGTGCGACAGG...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCAGGAGCCACCACTGCTaGGTCCTGCCTGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFRSHHC*VLPAGP
Trigger: TGGGCCAGCAGGCAGGACTCAGCAGTGGTGGCTCCT...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCATGGTCTTGATCTCCTaGCCTTGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSMVLIS*PCDPPA
Trigger: GGCGGGCGGATCACAAGGTCAGGAGATCAAGACCAT...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGTTCCAGGGAAAGACCTaGCGTGCAACAGACACAGGA +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRFQGKT*RATDTG
Trigger: TCCTGTGTCTGTTGCACGGCAGGTCTTTCCCTGGAA...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCGGCAGAATAATTCCCTaGCCCCACCACTGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAGRIIP*PHHCPA
Trigger: GGCGGGGCAGTGGTGGGGGCAGGGAATTATTCTGCC...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCGCCCCCGGGCCATGGTaGCTCCACTCAGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCAPGPW*LHSAPC
Trigger: GCATGGAGCTGAGTGGAGCCACCATGGCCCGGGGGC...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCCTCTGGTGAGGTTGTaGGCATGTGGCGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSPLVRL*ACGGLT
Trigger: AGTCAAGCCGCCACATGCCCACAACCTCACCAGAGG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGGCTGTAAAGATTCCTaGCCATGCTCCCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSGCKDS*PCSLVH
Trigger: GTGTACCAGGGAGCATGGCCAGGAATCTTTACAGCC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CAA 72 bp CCCCCAATGGGCTACAAGGACCTCTCCTTACAGGTATaGAGTCAAGAACACTGGGCATCAGTGGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: PPMGYKDLSLQV*SQEHWASVEDV
Trigger: CACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGAGGTCCTTGTAGCCCATTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCATGTGGCGGCTTGACTaGGCTGGGGGCAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFMWRLD*AGGKGA
Trigger: TGCCCCTTTGCCCCCAGCTCAGTCAAGCCGCCACAT...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCGCTTGGGGGTGGAGGTaGGGATCGCCCTGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAAWGWR*GSPCVN
Trigger: ATTGACACAGGGCGATCCTCACCTCCACCCCCAAGC...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTATTGTGTGCCGCACGTTaGTTCTGCCCCTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVLCAAR*FCPSGL
Trigger: AAGGCCAGAGGGGCAGAATCAACGTGCGGCACACAA...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCAGGAGTCCGGGCCAATaGATGCCAGTGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFRSPGQ*MPVTPG
Trigger: CCCAGGGGTCACTGGCATTCATTGGCCCGGACTCCT...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCCAAAGCATGAACTCTaGCGTGGTGGGAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRPKHEL*RGGKQK
Trigger: TTTCTGCTTCCCACCACGGCAGAGTTCATGCTTTGG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGGTGGATGTCCACGAATaGCCAAATGTTGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRVDVHE*PNVAGW
Trigger: CCATCCAGCAACATTTGGGCATTCGTGGACATCCAC...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTCTAAGGTCATACCGCTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFLRSYR*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGCGGTATGACCTTAG...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCCAGCTCCATGCTCTCTaGCCTTTGACTCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSQLHAL*PLTLKS
Trigger: ACTCTTCAGAGTCAAAGGCCAGAGAGCATGGAGCTG...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACACCACCTTCACCTCTaGACATGTGTCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVHHLHL*TCVRSL
Trigger: CAGGCTGCGGACACATGTCCAGAGGTGAAGGTGGTG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCTTGATTCTGCCCCTCTaGCCTTCCTTTGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSLILPL*PSFGSL
Trigger: AAGGGAACCAAAGGAAGGCCAGAGGGGCAGAATCAA...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCAATGCCAGTGACCCCTaGGGCTGGAAAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSNASDP*GWKRQG
Trigger: TCCTTGCCTTTTCCAGCCCCAGGGGTCACTGGCATT...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCATGTGGCGGCTTGACTaGGCTGGGGGCAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCMWRLD*AGGKGA
Trigger: TGCCCCTTTGCCCCCAGCTCAGTCAAGCCGCCACAT...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCGCTTGGGGGTGGAGGTaGGGATCGCCCTGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFAWGWR*GSPCVN
Trigger: ATTGACACAGGGCGATCCTCACCTCCACCCCCAAGC...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCTTGCCACATTCCCTTTaGTGCTTCTTAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSLPHSL*CFLGRG
Trigger: ACCACGACCTAAGAAGCATCAAAGGGAATGTGGCAA...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAAGAGGGGACAACGGATaGAGGGTCAGAGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVRGDNG*RVREMW
Trigger: CCACATCTCTCTGACCCTTCATCCGTTGTCCCCTCT...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCCTTCTGAGGCTCAGATaGGGGTGCCGCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFLLRLR*GCRSDS
Trigger: GGAGTCACTGCGGCACCCTCATCTGAGCCTCAGAAG...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCACTCCTGATCTCAAGTaGTCCACCCACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSTPDLK*STHFSL
Trigger: GAGGCTGAAGTGGGTGGATCACTTGAGATCAGGAGT...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGGCAGGTTCTTGATATaGAGGAACAAGACTAGCAGG +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSGRFLI*RNKTSR
Trigger: CCTGCTAGTCTTGTTCCTGCATATCAAGAACCTGCC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCGCGCCTGGCCGCTGCTaGTGCTTCTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAAPGRC*CFFFFF
Trigger: GAAGAAGAAGAAGAAGCAGCAGCAGCGGCCAGGCGC...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTCCTTTGGGCCCCACTaGTCCTGCCTTTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCSFGPH*SCLSRG
Trigger: GCCCCTGGAAAGGCAGGACCAGTGGGGCCCAAAGGA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGTACCACCAGGCTCCTTaGAACTTCTCAGCACAATTC +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRYHQAP*NFSAQF
Trigger: GAATTGTGCTGAGAAGTTCCAAGGAGCCTGGTGGTA...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCCCTCTGGTGAGGTTGTaGGCATGTGGCGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAPLVRL*ACGGLT
Trigger: AGTCAAGCCGCCACATGCCCACAACCTCACCAGAGG...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCCCTGTGTCAATTACTaGAGGTGGAAAATCCTCGCA +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRPCVNY*RWKILA
Trigger: TGCGAGGATTTTCCACCTCCAGTAATTGACACAGGG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTCTTCTCTGTGCAGGTaGCTGACCAGGCGCTCACTT +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFSSLCR*LTRRSL
Trigger: AAGTGAGCGCCTGGTCAGCCACCTGCACAGAGAAGA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTTGAGAAATCTCCCCTaGCCTGGGAGCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFLRNLP*PGSWRS
Trigger: GCTTCTCCAGCTCCCAGGCCAGGGGAGATTTCTCAA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCCTGAGTCCTGCCTGCTaGCCCAGTAAGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCLSPAC*PSKAQG
Trigger: TCCCTGGGCCTTACTGGGCCAGCAGGCAGGACTCAG...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCGAGATGTGGTGCTGCTaGCTTTGGGGTTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAEMWCC*LWGWGK
Trigger: CTTCCCCCAACCCCAAAGCCAGCAGCACCACATCTC...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCATAGAGACCTGGACATaGGAGAGGATCCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSIETWT*ERIPDH
Trigger: ATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTAT...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGAGACCATTGAGGTTTaGAGCATGACAGTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSETIEV*SMTVGV
Trigger: TACGCCGACTGTCATGCTTCAAACCTCAATGGTCTC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCCTCTGTGCAGGTGGCTaGCCAGGCGCTCACTTAGTG +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCLCAGG*PGAHLV
Trigger: CACTAAGTGAGCGCCTGGTCAGCCACCTGCACAGAG...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGCATGTCATCTTCTGTaGAGTGTCTGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSACHLL*SVCSHL
Trigger: GAGATGTGAACAGACACTTCACAGAAGATGACATGC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCTTCTTCTCCAACAGTTaGTGCCAAGCCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSFFSNS*CQAIFQ
Trigger: CTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAA...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGTCCTCTCTGCCTTCCTaGATACTATGTCTAGCATTC +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRSSLPS*ILCLAF
Trigger: GAATGCTAGACATAGTATTCAGGAAGGCAGAGAGGA...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTGGGAAAGACCTGCCGTaGAACAGACACAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFGKDLP*NRHRKV
Trigger: CACTTTCCTGTGTCTGTTGCACGGCAGGTCTTTCCC...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCGTCAGAGAGATGTGGTaGTGCTGGCTTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAVREMW*CWLWGW
Trigger: CCAACCCCAAAGCCAGCAGCACCACATCTCTCTGAC...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCCACAAAGTCAGAGCCTaGAAATACCTTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSHKVRA*KYLPWQ
Trigger: TTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTG...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGAATACCTTGCTCCCCTaGATGTCATCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRNTLLP*MSSSVK
Trigger: CTTCACAGAAGATGACATGCAGGGGAGCAAGGTATT...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCAATACCTTGCTCCCCTaGATGTCATCTTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSNTLLP*MSSSVK
Trigger: CTTCACAGAAGATGACATGCAGGGGAGCAAGGTATT...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAAGCTCGCTGCTTCCCTaGGCAGTCAGGGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLSSLLP*AVRAWM
Trigger: CATCCACGCCCTGACTGCCCAGGGAAGCAGCGAGCT...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCTCTCCCCTAGAACCCTaGAAGGAGCCACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFSPLEP*KEPPLL
Trigger: CAGCAGTGGTGGCTCCTTCCAGGGTTCTAGGGGAGA...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTGGTGCTGCTGGCTTTaGGGTTGGGGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCWCCWL*GWGKES
Trigger: GGACTCCTTCCCCCAACCCCAAAGCCAGCAGCACCA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCGGCTGATTCCAGTTTaGTGCTATGGTGAGTATTTG +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRRLIPV*CYGEYL
Trigger: CAAATACTCACCATAGCACCAAACTGGAATCAGCCG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGTGTAGCTCATGTTCCTaGATCCAAGCATGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRCSSCS*IQACAV
Trigger: AACTGCACATGCTTGGATCCAGGAACATGAGCTACA...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCCTGGTCAGCCCCCAATaGGCTACAAGGACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFLVSPQ*ATRTSP
Trigger: AGGAGAGGTCCTTGTAGCCCATTGGGGGCTGACCAG...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCGGGCGTAGTAGGGTCTaGTCAGCCCCCAATGGGCTA +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCGRSRV*SAPNGL
Trigger: TAGCCCATTGGGGGCTGACCAGACCCTACTACGCCC...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCACAAAAGGCATATTTTaGCCAGGCACAGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSTKGIF*PGTVSH
Trigger: GTGAGACACTGTGCCTGGCCAAAATATGCCTTTTGT...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCTCTGCTGATGTGAGTTaGGGAGGAATTGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSSADVS*GGIGDG
Trigger: CCCATCACCAATTCCTCCCCAACTCACATCAGCAGA...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CAA 72 bp TGTCGGCTGATTCCAGTTTGGTGCTATGGTGAGTATTaGGCTGTAAAGATTCCTGGCCATGCTCCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: CRLIPVWCYGEY*AVKIPGHAPWY
Trigger: GTACCAGGGAGCATGGCCAGGAATCTTTACAGCCAAATACTCACCATAGCACCAAACTGGAATCAGCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCGTCACTCAACCTCCCTaGACATCGGTAGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAVTQPP*TSVVPS
Trigger: AGATGGCACTACCGATGTTCAGGGAGGTTGAGTGAC...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGAGGAGCCACCACTGCTaGGTCCTGCCTGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKRSHHC*VLPAGP
Trigger: TGGGCCAGCAGGCAGGACTCAGCAGTGGTGGCTCCT...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCCCTAGTCTAATCCCATaGGTCTCAGGAGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAPSLIP*VSGVET
Trigger: GGTCTCCACTCCTGAGACTCATGGGATTAGACTAGG...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTACTTCTGAGGCTCAGATaGGGGTGCCGCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLLLRLR*GCRSDS
Trigger: GGAGTCACTGCGGCACCCTCATCTGAGCCTCAGAAG...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACATCTTTCTAACTTCTaGGGCTCAGATGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVHLSNF*GSDEGA
Trigger: GGCACCCTCATCTGAGCCTCAGAAGTTAGAAAGATG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCTTGCTGCCATGTTTGTaGGACTCATGCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSLLPCL*DSCSLC
Trigger: ACACAAGGAGCATGAGTCTCACAAACATGGCAGCAA...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCTGGGAGGCTGAAGCATaGGAATCTCTTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAWEAEA*ESLEPG
Trigger: CCCAGGTTCAAGAGATTCTCATGCTTCAGCCTCCCA...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCACTCCTGATCTCAAGTaGTCCACCCACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAATPDLK*STHFSL
Trigger: GAGGCTGAAGTGGGTGGATCACTTGAGATCAGGAGT...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTCAGTTCTGCTGATGTaGGTTGGGGAGGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFSVLLM*VGEELV
Trigger: CACCAATTCCTCCCCAACTCACATCAGCAGAACTGA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCAGGTGGAGGTTGCAGTaGGCTAAGGTCATACCGCTG +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFRWRLQ*AKVIPL
Trigger: CAGCGGTATGACCTTAGCTCACTGCAACCTCCACCT...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGGCAGGTCCTTGCAGTTaGGTGGGCCTGTCGCACACG +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVAGPCS*VGLSHT
Trigger: CGTGTGCGACAGGCCCACGCAACTGCAAGGACCTGC...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCTACACGGAGCTCGCTaGTTCCCTGGGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLHGAR*FPGQSG
Trigger: CCCTGACTGCCCAGGGAAGCAGCGAGCTCCGTGTAG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCTCCCCACTAGCAGGTaGATGTGGAGGGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLPTSR*MWRGPG
Trigger: GCCAGGACCCCTCCACATGCACCTGCTAGTGGGGAG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTTCGGAATCTTCTCTGTaGAGGTGGCTGACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSISESSL*RWLTRR
Trigger: GCGCCTGGTCAGCCACCTGCACAGAGAAGATTCCGA...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTAGAGAGATGTGGTGCTaGTGGCTTTGGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIREMWC*WLWGWG
Trigger: CCCCCAACCCCAAAGCCAGCAGCACCACATCTCTCT...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCGTCAGAGAGATGTGGTaGTGCTGGCTTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFVREMW*CWLWGW
Trigger: CCAACCCCAAAGCCAGCAGCACCACATCTCTCTGAC...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGTCCTTTGGGCCCCACTaGTCCTGCCTTTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVSFGPH*SCLSRG
Trigger: GCCCCTGGAAAGGCAGGACCAGTGGGGCCCAAAGGA...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTCTCCCCTAGAACCCTaGAAGGAGCCACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCSPLEP*KEPPLL
Trigger: CAGCAGTGGTGGCTCCTTCCAGGGTTCTAGGGGAGA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTATGGTGCTGCTGGCTTTaGGGTTGGGGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLWCCWL*GWGKES
Trigger: GGACTCCTTCCCCCAACCCCAAAGCCAGCAGCACCA...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGAGACTTTGCTGATGTaGTTAGGGATAGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSETLLM*LGIETW
Trigger: CCAGGTCTCTATCCCTAACCACATCAGCAAAGTCTC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCCTGGTCAGCCCCCAATaGGCTACAAGGACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCLVSPQ*ATRTSP
Trigger: AGGAGAGGTCCTTGTAGCCCATTGGGGGCTGACCAG...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAGGGCGTAGTAGGGTCTaGTCAGCCCCCAATGGGCTA +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLGRSRV*SAPNGL
Trigger: TAGCCCATTGGGGGCTGACCAGACCCTACTACGCCC...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCGTAATCTCAGCAATTTaGGAGGCAGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAVISAI*EAEAGG
Trigger: TCCACCCGCCTCTGCCTCCCAAATTGCTGAGATTAC...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CAA 72 bp CAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTaGCTGATGTGGTTAGGGATAGAGACCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: QSLQIPSMAKET*LMWLGIETWTW
Trigger: CCATGTCCAGGTCTCTATCCCTAACCACATCAGCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTAGAGGGGACAACGGATaGAGGGTCAGAGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIRGDNG*RVREMW
Trigger: CCACATCTCTCTGACCCTTCATCCGTTGTCCCCTCT...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTTGCTGCCATGTTTGTaGGACTCATGCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFLLPCL*DSCSLC
Trigger: ACACAAGGAGCATGAGTCTCACAAACATGGCAGCAA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAGCCTACACTCCTACTTaGGAGGTCCCATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLAYTPT*EVPWPG
Trigger: TCCTGGCCATGGGACCTCTCAAGTAGGAGTGTAGGC...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCAGGCAGCAAGAAGATaGTCTCACACCAAAAATAAT +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRQAARR*SHTKNN
Trigger: ATTATTTTTGGTGTGAGATCATCTTCTTGCTGCCTG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCCATGTGTCCGCAGCCTaGGCAGGCAGGTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCHVSAA*AGRFLI
Trigger: TATCAAGAACCTGCCTGCCCAGGCTGCGGACACATG...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCCATCCATCCTCCGCTaGAAAACGGTCCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVPSILR*KTVQPP
Trigger: AGGGGGCTGGACCGTTTTCCAGCGGAGGATGGATGG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTTGAGAAATCTCCCCTaGCCTGGGAGCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCLRNLP*PGSWRS
Trigger: GCTTCTCCAGCTCCCAGGCCAGGGGAGATTTCTCAA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAGAGATGTGGTGCTGCTaGCTTTGGGGTTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLEMWCC*LWGWGK
Trigger: CTTCCCCCAACCCCAAAGCCAGCAGCACCACATCTC...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCAGGGTCAGAGAGATGTaGTGCTGCTGGCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCRVREM*CCWLWG
Trigger: ACCCCAAAGCCAGCAGCACCACATCTCTCTGACCCT...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCGGCTGATTCCAGTTTaGTGCTATGGTGAGTATTTG +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSRLIPV*CYGEYL
Trigger: CAAATACTCACCATAGCACCAAACTGGAATCAGCCG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTATTGAGTCAAGAACACTaGGCATCAGTGGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVLSQEH*ASVEDV
Trigger: CACATCCTCCACTGATGCCCAGTGTTCTTGACTCAA...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTCAACCTCTGCCTCCTaGGTTCACGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCSTSAS*VHAILL
Trigger: CAGGAGAATGGCGTGAACCCAGGAGGCAGAGGTTGA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCGGGCAGGCAGGTTCTTaGTATGCAGGAACAAGACTA +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFGQAGS*YAGTRL
Trigger: TAGTCTTGTTCCTGCATATCAAGAACCTGCCTGCCC...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTCGCCGCACTCCAGTTaGTACCATTGGCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCSPHSS*YHWHSS
Trigger: AGAGCTATGCCAATGGTATCAACTGGAGTGCGGCGA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTGTCACTCAACCTCCCTaGACATCGGTAGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIVTQPP*TSVVPS
Trigger: AGATGGCACTACCGATGTTCAGGGAGGTTGAGTGAC...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTATTCTGGACCCCAAAGTaGCCTTTTTCAAGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVFWTPK*PFSRSV
Trigger: CACACTTCTTGAAAAAGGTCACTTTGGGGTCCAGAA...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCTGGGAGCTCTTGATTTaGATGGAGTCACACTTGCCA +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAWELLI*MESHLP
Trigger: TGGCAAGTGTGACTCCATTCAAATCAAGAGCTCCCA...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCCATCTTTCTAACTTCTaGGGCTCAGATGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFHLSNF*GSDEGA
Trigger: GGCACCCTCATCTGAGCCTCAGAAGTTAGAAAGATG...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTTCTTCTCCAACAGTTaGTGCCAAGCCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFFFSNS*CQAIFQ
Trigger: CTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTCTCCTTACAGGTATTaGGTCAAGAACACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFSPYRY*VKNTGH
Trigger: ATGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTATCTCCTTACAGGTATTaGGTCAAGAACACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVSPYRY*VKNTGH
Trigger: ATGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGA...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCAAAATGCTTACCTACTaGGGGACGAAAGTACTATCC +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSKMLTY*GTKVLS
Trigger: GGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTT...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTGGGAGGCTGAAGCATaGGAATCTCTTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCWEAEA*ESLEPG
Trigger: CCCAGGTTCAAGAGATTCTCATGCTTCAGCCTCCCA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGGAGAATTACCCGCACTaGCCCCGACAAAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVENYPH*PRQRLP
Trigger: TGGGAGCCTTTGTCGGGGGCAGTGCGGGTAATTCTC...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGAGAGAGATGTGGTGCTaGTGGCTTTGGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVREMWC*WLWGWG
Trigger: CCCCCAACCCCAAAGCCAGCAGCACCACATCTCTCT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTTCACGCCATTCTCCTaGCTCAGCTTCTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCFTPFS*LSFSSS
Trigger: GCTACTCGAGAAGCTGAGGCAGGAGAATGGCGTGAA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGGTCCTTGCAGTTGCGTaGGCCTGTCGCACACGACTG +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKVLAVA*ACRTRL
Trigger: CAGTCGTGTGCGACAGGCCCACGCAACTGCAAGGAC...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGGCTGAGGTCTGTGTGTaGGAGGAAGGCCTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVAEVCV*EEGLFG
Trigger: TCCGAAGAGGCCTTCCTCCCACACACAGACCTCAGC...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCATGCTTCTTAGGTCGTaGTTGAGAAATCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAMLLRS*LRNLPW
Trigger: CCAGGGGAGATTTCTCAACCACGACCTAAGAAGCAT...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTGGCTGTAAAGATTCCTaGCCATGCTCCCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIGCKDS*PCSLVH
Trigger: GTGTACCAGGGAGCATGGCCAGGAATCTTTACAGCC...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCTTACAATCACCACCTaGGTCAAGAAACAGAGCATT +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSLTITT*VKKQSI
Trigger: AATGCTCTGTTTCTTGACCCAGGTGGTGATTGTAAG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTACCAAATGTTGCTGGATaGGCCCACGCCTACACTCCT +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLPNVAG*AHAYTP
Trigger: AGGAGTGTAGGCGTGGGCCCATCCAGCAACATTTGG...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCCCAAAGCATGAACTCTaGCGTGGTGGGAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCPKHEL*RGGKQK
Trigger: TTTCTGCTTCCCACCACGGCAGAGTTCATGCTTTGG...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTAAAGATTCCTGGCCATaGTCCCTGGTACACATGACG +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIKDSWP*SLVHMT
Trigger: CGTCATGTGTACCAGGGAGCATGGCCAGGAATCTTT...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCGTGCCCAGCCTGCTTTaGTTCTTAAAATTAATGTTC +
Preference number: 4 (lower is better)
Translates to: LTGIESRTLGISGGCACSVPSLL*FLKLMF
Trigger: GAACATTAATTTTAAGAAGCAAAGCAGGCTGGGCAC...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCCTGGCCGCTGCTGCTaGTTCTTCTTCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVPGRCC*FFFFFL
Trigger: GAGGAAGAAGAAGAAGAAGCAGCAGCAGCGGCCAGG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCGAATGCCCAAATGTTaGTGGATGGGCCCACGCCTA +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVRMPKC*WMGPRL
Trigger: TAGGCGTGGGCCCATCCAGCAACATTTGGGCATTCG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCATGTGTCCGCAGCCTaGGCAGGCAGGTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVHVSAA*AGRFLI
Trigger: TATCAAGAACCTGCCTGCCCAGGCTGCGGACACATG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTAGCCATTTTCCAGGTTaGTTCCATCAATTCGCATTG +
Preference number: 4 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFSHFPG*FHQFAL
Trigger: CAATGCGAATTGATGGAACCAACCTGGAAAATGGCT...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCACAAAAGGCATATTTTaGCCAGGCACAGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAATKGIF*PGTVSH
Trigger: GTGAGACACTGTGCCTGGCCAAAATATGCCTTTTGT...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAAGAAACAACACTATGTaGATGTCCACGAATGCCCAA +
Preference number: 4 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVRNNTM*MSTNAQ
Trigger: TTGGGCATTCGTGGACATCCACATAGTGTTGTTTCT...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGGCATTATTAGTGAACTaGAATATAGGTCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRALLVN*NIGQQK
Trigger: TTTCTGCTGACCTATATTCCAGTTCACTAATAATGC...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CAA 72 bp CTTGATTTGAATGGAGTCACACTTGCCACATTCCCTTaGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: LDLNGVTLATFP*MLLRSWLRNLP
Trigger: GGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAATGTGGCAAGTGTGACTCCATTCAAATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
3UTR CAA 72 bp CCAAGCCATTTTCCAGGTTGGTTCCATCAATTCGCATaGTTACTAGCAGTGTATGCAAATCTCCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PSHFPGWFHQFA*LLAVYANLPPT
Trigger: TGTGGGAGGGAGATTTGCATACACTGCTAGTAACAATGCGAATTGATGGAACCAACCTGGAAAATGGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCCTTTTTCAAGAAGTGTaGAGTGTTGTGAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAALFQEV*SVVSEA
Trigger: TGCCTCACTCACAACACTTCACACTTCTTGAAAAAG...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCTTCTGGACCCCAAAGTaGCCTTTTTCAAGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFFWTPK*PFSRSV
Trigger: CACACTTCTTGAAAAAGGTCACTTTGGGGTCCAGAA...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTTGGGAGCTCTTGATTTaGATGGAGTCACACTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIWELLI*MESHLP
Trigger: TGGCAAGTGTGACTCCATTCAAATCAAGAGCTCCCA...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCCTAGTCTAATCCCATaGGTCTCAGGAGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVPSLIP*VSGVET
Trigger: GGTCTCCACTCCTGAGACTCATGGGATTAGACTAGG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGGGCAGGAGAATTGTTTaGGCCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKGRRIV*AQEVEV
Trigger: AACCTCCACCTCCTGGGCTCAAACAATTCTCCTGCC...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCGGCAGGTTCTTGATATaGAGGAACAAGACTAGCAGG +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCGRFLI*RNKTSR
Trigger: CCTGCTAGTCTTGTTCCTGCATATCAAGAACCTGCC...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCAAGAAGTTGTTGTTGTaGCCCGTTAGAGAATTACCC +
Preference number: 4 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAKKLLL*PVRELP
Trigger: GGGTAATTCTCTAACGGGCCACAACAACAACTTCTT...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGTCTTCTCTGTGCAGGTaGCTGACCAGGCGCTCACTT +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKSSLCR*LTRRSL
Trigger: AAGTGAGCGCCTGGTCAGCCACCTGCACAGAGAAGA...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGAATGCCAGTGACCCCTaGGGCTGGAAAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKNASDP*GWKRQG
Trigger: TCCTTGCCTTTTCCAGCCCCAGGGGTCACTGGCATT...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTGAGACTTTGCTGATGTaGTTAGGGATAGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIETLLM*LGIETW
Trigger: CCAGGTCTCTATCCCTAACCACATCAGCAAAGTCTC...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTTGAGTCAAGAACACTaGGCATCAGTGGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCLSQEH*ASVEDV
Trigger: CACATCCTCCACTGATGCCCAGTGTTCTTGACTCAA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGGGGCAGGCAGGTTCTTaGTATGCAGGAACAAGACTA +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVGQAGS*YAGTRL
Trigger: TAGTCTTGTTCCTGCATATCAAGAACCTGCCTGCCC...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGTTGAGGTTTGAAGCATaGCAGTCGGCGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKLRFEA*QSAYHQ
Trigger: CTGGTGGTACGCCGACTGTCATGCTTCAAACCTCAA...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTAAGAGGAGGAGGGCTTaGTTTCTTTTCACCCATTCA +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIKRRRA*FLFTHS
Trigger: TGAATGGGTGAAAAGAAATCAAGCCCTCCTCCTCTT...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCAGAACAAGAGACATATaGGACACGAGCAAACATTGG +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFRTRDI*DTSKHW
Trigger: CCAATGTTTGCTCGTGTCTCATATGTCTCTTGTTCT...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCCTGATTCCAGTTTGGTaGTATGGTGAGTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFLIPVW*YGEYLA
Trigger: AGCCAAATACTCACCATAGCACCAAACTGGAATCAG...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCAAAAATTGCTGGGCATaGTTGTGTGTGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCKNCWA*LCVPVI
Trigger: GATCACAGGCACACACAACCATGCCCAGCAATTTTT...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTAGCATGGCGGCAAGAATaGCATAAAAAGCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLAWRQE*HKKQKG
Trigger: TCCCTTCTGCTTTTTATGCCATTCTTGCCGCCATGC...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
3UTR CAA 72 bp TCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTaGGTTCCATCAATTCGCATTGTTACTAGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: SSPTVDAKPFSR*VPSIRIVTSSV
Trigger: TACACTGCTAGTAACAATGCGAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGTTGCCACATTCCCTTTaGTGCTTCTTAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLPHSL*CFLGRG
Trigger: ACCACGACCTAAGAAGCATCAAAGGGAATGTGGCAA...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTAAAATGCTTACCTACTaGGGGACGAAAGTACTATCC +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIKMLTY*GTKVLS
Trigger: GGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTT...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTATTGGGGAGGAATTGGTaGTGGGAAAAGACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLLGRNW*WEKTLH
Trigger: ATGAAGAGTCTTTTCCCATCACCAATTCCTCCCCAA...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGATGCTTCTTAGGTCGTaGTTGAGAAATCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVMLLRS*LRNLPW
Trigger: CCAGGGGAGATTTCTCAACCACGACCTAAGAAGCAT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGATAGAGACCTGGACATaGGAGAGGATCCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVIETWT*ERIPDH
Trigger: ATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTAT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCAGCCATTTTCCAGGTTaGTTCCATCAATTCGCATTG +
Preference number: 4 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCSHFPG*FHQFAL
Trigger: CAATGCGAATTGATGGAACCAACCTGGAAAATGGCT...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR GCA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCTTTGGGTGCTGATTTaGATTTCTCTGGTAAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSILWVLI*ISLVSE
Trigger: TTCACTTACCAGAGAAATGCAAATCAGCACCCAAAG...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGAAAAATTGCTGGGCATaGTTGTGTGTGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVKNCWA*LCVPVI
Trigger: GATCACAGGCACACACAACCATGCCCAGCAATTTTT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCTTTTTCAAGAAGTGTaGAGTGTTGTGAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVLFQEV*SVVSEA
Trigger: TGCCTCACTCACAACACTTCACACTTCTTGAAAAAG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR TCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGGCATGTCATCTTCTGTaGAGTGTCTGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKACHLL*SVCSHL
Trigger: GAGATGTGAACAGACACTTCACAGAAGATGACATGC...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGCATTTCTCTGGTAAGTaGAAAGTGGAGCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVHFSGK*KVEHFL
Trigger: CAAAAAGTGCTCCACTTTTCACTTACCAGAGAAATG...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGCTTACAATCACCACCTaGGTCAAGAAACAGAGCATT +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKLTITT*VKKQSI
Trigger: AATGCTCTGTTTCTTGACCCAGGTGGTGATTGTAAG...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGCATTTCTCTGGTAAGTaGAAAGTGGAGCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKHFSGK*KVEHFL
Trigger: CAAAAAGTGCTCCACTTTTCACTTACCAGAGAAATG...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR TCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGAGTTTGGTGCTATGGTaGGTATTTGGCTGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKSLVLW*VFGCKD
Trigger: ATCTTTACAGCCAAATACTCACCATAGCACCAAACT...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR GCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGCTTTGGGTGCTGATTTaGATTTCTCTGGTAAGTGAA +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKLWVLI*ISLVSE
Trigger: TTCACTTACCAGAGAAATGCAAATCAGCACCCAAAG...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CCA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGAAATGTATCATAGCATaGCGGCAAGAATGGCATAAA +
Preference number: 4 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKKCIIA*RQEWHK
Trigger: TTTATGCCATTCTTGCCGCCATGCTATGATACATTT...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS GCA 90 bp CTTCCACGACGCAGCGCTTGTGGGTGTGGCCTCCCCACTAGCAGGTaGATGTGGAGGGGTCCTGGCCCGTCTAGGCGGGCCGCACCTTCA +
Preference number: 5 (lower is better)
Translates to: LPRRSACGCGLPTSR*MWRGPGPSRRAAPS
Trigger: TGAAGGTGCGGCCCGCCTAGACGGGCCAGGACCCCTCCACATGCACCTGCTAGTGGGGAGGCCACACCCACAAGCGCTGCGTCGTGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS CCA 90 bp TATGCAGGAACAAGACTAGCAGGACAGCGAGCCCCCGGGCCATGGTaGCTCCACTCAGCTCCATGCTCTCTGGCCTTTGACTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: YAGTRLAGQRAPGPW*LHSAPCSLAFDSEE
Trigger: CTCTTCAGAGTCAAAGGCCAGAGAGCATGGAGCTGAGTGGAGCCACCATGGCCCGGGGGCTCGCTGTCCTGCTAGTCTTGTTCCTGCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCTCCCTCTGGTGAGGTaGTGGGCATGTGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRLPLVR*WACGGL
Trigger: CAAGCCGCCACATGCCCACAACCTCACCAGAGGGAG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTCCACGACGCAGCGCTaGTGGGTGTGGCCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFSTTQR*WVWPPH
Trigger: GTGGGGAGGCCACACCCACAAGCGCTGCGTCGTGGA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCGCCTACACTCCTACTaGAGAGGTCCCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRRLHSY*RGPMAR
Trigger: CCTGGCCATGGGACCTCTCAAGTAGGAGTGTAGGCG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTCTCCTCGGTCTCCTTaGGGCCCCACTGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFSPRSP*GPTGPA
Trigger: GGCAGGACCAGTGGGGCCCAAAGGAGACCGAGGAGA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTAGCAGGTCCTTGCAGTaGCGTGGGCCTGTCGCACAC +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFSRSLQ*RGPVAH
Trigger: GTGTGCGACAGGCCCACGCAACTGCAAGGACCTGCT...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTCTCCCTCTGGTGAGGTaGTGGGCATGTGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFLPLVR*WACGGL
Trigger: CAAGCCGCCACATGCCCACAACCTCACCAGAGGGAG...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCTCTCCTCGGTCTCCTTaGGGCCCCACTGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCSPRSP*GPTGPA
Trigger: GGCAGGACCAGTGGGGCCCAAAGGAGACCGAGGAGA...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGCTTGCCACATTCCCTTaGATGCTTCTTAGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRLATFP*MLLRSW
Trigger: CCACGACCTAAGAAGCATCAAAGGGAATGTGGCAAG...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCCTTGCCACATTCCCTTaGATGCTTCTTAGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSLATFP*MLLRSW
Trigger: CCACGACCTAAGAAGCATCAAAGGGAATGTGGCAAG...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTACGAATGCCCAAATGTaGCTGGATGGGCCCACGCCT +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFTNAQM*LDGPTP
Trigger: AGGCGTGGGCCCATCCAGCAACATTTGGGCATTCGT...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTCATGCTCTCTGGCCTTaGACTCTGAAGAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFHALWP*TLKSPP
Trigger: TGGGGGACTCTTCAGAGTCAAAGGCCAGAGAGCATG...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp AATACACACAAAGTCAGAGCCTGCAAATACCTTCCATGGCAAAAGAGACTTTGCAGCAGGTCCTTGCAGTaGCGTGGGCCTGTCGCACAC +
Preference number: 5 (lower is better)
Translates to: NTHKVRACKYLPWQKRLCSRSLQ*RGPVAH
Trigger: GTGTGCGACAGGCCCACGCAACTGCAAGGACCTGCT...GCAAAGTCTCTTTTGCCATGGAAGGTATTTGCAGGCTCTGACTTTGTGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGGTGGAGAAGAAGTTGTaGTTGTGGCCCGTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRVEKKL*LWPVRE
Trigger: TTCTCTAACGGGCCACAACAACAACTTCTTCTCCAC...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCCAGAACCCCAGAGGCTaGTCCCTGTCCCTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFQNPRG*SLSLPS
Trigger: ACTGGGAAGGGACAGGGACAAGCCTCTGGGGTTCTG...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCTCAAGAAACAGAGCATaGCCAGAACCCCAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LTGIESRTLGISGGCACSSRNRA*PEPQRL
Trigger: AAGCCTCTGGGGTTCTGGCAATGCTCTGTTTCTTGA...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp GATGTGGTTAGGGATAGAGACCTGGACATGGGAGAGGATCCCAGATCATCCAGGTACAAAAGGCATATTTaGGCCAGGCACAGTGTCTCA +
Preference number: 5 (lower is better)
Translates to: DVVRDRDLDMGEDPRSSRYKRHI*ARHSVS
Trigger: TGAGACACTGTGCCTGGCCAAAATATGCCTTTTGTA...CCTGGATGATCTGGGATCCTCTCCCATGTCCAGGTCTCTATCCCTAACCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCGAGAAGAAGTTGTTGTaGTGGCCCGTTAGAGAATTA +
Preference number: 5 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSEKKLL*WPVREL
Trigger: TAATTCTCTAACGGGCCACAACAACAACTTCTTCTC...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGTGGGCATGTGGCGGCTaGACTGAGCTGGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVWACGG*TELGAK
Trigger: CTTTGCCCCCAGCTCAGTCAAGCCGCCACATGCCCA...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCAAGCCATTTTCCAGGTaGGTTCCATCAATTCGCATT +
Preference number: 5 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSKPFSR*VPSIRI
Trigger: AATGCGAATTGATGGAACCAACCTGGAAAATGGCTT...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCATAGCACATACCCTCTaGAACAGGCTCCTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LTGIESRTLGISGGCACSIAHTL*NRLLLL
Trigger: CAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTAT...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTACAGAACCCCAGAGGCTaGTCCCTGTCCCTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLQNPRG*SLSLPS
Trigger: ACTGGGAAGGGACAGGGACAAGCCTCTGGGGTTCTG...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCCTTCTTAGGTCGTGGTaGAGAAATCTCCCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFLLRSW*RNLPWP
Trigger: AGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAG...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCCTTCTTCTCCAACAGTaGATGCCAAGCCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: LTGIESRTLGISGGCACSLLLQQ*MPSHFP
Trigger: TGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTATAGCACATACCCTCTaGAACAGGCTCCTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFIAHTL*NRLLLL
Trigger: CAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTAT...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTACTCTCCTTACAGGTATaGAGTCAAGAACACTGGGCA +
Preference number: 5 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVLSLQV*SQEHWA
Trigger: TGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGAG...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTCTCTCCTTACAGGTATaGAGTCAAGAACACTGGGCA +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFLSLQV*SQEHWA
Trigger: TGCCCAGTGTTCTTGACTCAATACCTGTAAGGAGAG...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp TTCCCTTTGATGCTTCTTAGGTCGTGGTTGAGAAATCTCCCCTGGCCTGGGAGCTGTGCCCAGCCTGCTTaGCTTCTTAAAATTAATGTT +
Preference number: 5 (lower is better)
Translates to: FPLMLLRSWLRNLPWPGSCAQPA*LLKINV
Trigger: AACATTAATTTTAAGAAGCAAAGCAGGCTGGGCACA...GCTCCCAGGCCAGGGGAGATTTCTCAACCACGACCTAAGAAGCATCAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp CTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTCTCAAGAAACAGAGCATaGCCAGAACCCCAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LLLQQLMPSHFPGWFHQFSRNRA*PEPQRL
Trigger: AAGCCTCTGGGGTTCTGGCAATGCTCTGTTTCTTGA...GAATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp CTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAGCTTTTTGATAAATACCTaGCTCCCCTGCATGTCATCT +
Preference number: 5 (lower is better)
Translates to: LTGIESRTLGISGGCACSFLINT*LPCMSS
Trigger: AGATGACATGCAGGGGAGCAAGGTATTTATCAAAAA...GCTACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAAAAGTGGAGCACTTTTaGATAAATACCTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVKVEHF*INTLLP
Trigger: GGGGAGCAAGGTATTTATCAAAAAGTGCTCCACTTT...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCTACAAAAGGCATATTTaGGCCAGGCACAGTGTCTCA +
Preference number: 5 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAYKRHI*ARHSVS
Trigger: TGAGACACTGTGCCTGGCCAAAATATGCCTTTTGTA...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp TCCTTACAGGTATTGAGTCAAGAACACTGGGCATCAGTGGAGGATGTGCCTGTAACTCTGACTGGTGTGTaGAAGAAAATGGAAGATGGT +
Preference number: 5 (lower is better)
Translates to: SLQVLSQEHWASVEDVPVTLTGV*KKMEDG
Trigger: ACCATCTTCCATTTTCTTCAACACACCAGTCAGAGT...TACAGGCACATCCTCCACTGATGCCCAGTGTTCTTGACTCAATACCTGTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp ATCTACAATGGAATCCATAGCACATACCCTCTTGAACAGGCTCCTTTTGCTGCCATGGCAAAAGAGACTTaGCTGATGTGGTTAGGGATA +
Preference number: 5 (lower is better)
Translates to: IYNGIHSTYPLEQAPFAAMAKET*LMWLGI
Trigger: TATCCCTAACCACATCAGCAAAGTCTCTTTTGCCAT...GGCAGCAAAAGGAGCCTGTTCAAGAGGGTATGTGCTATGGATTCCATTGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AGATCTACTGAGCCAGGAGGTGGCGAGTTCTTGTTGTTTCAAGCCACTCCATTTTTTTTGATAAATACCTaGCTCCCCTGCATGTCATCT +
Preference number: 5 (lower is better)
Translates to: RSTEPGGGEFLLFQATPFFLINT*LPCMSS
Trigger: AGATGACATGCAGGGGAGCAAGGTATTTATCAAAAA...AAATGGAGTGGCTTGAAACAACAAGAACTCGCCACCTCCTGGCTCAGTAGATCT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGTGGGCAGGCAGGTTCTaGATATGCAGGAACAAGACT +
Preference number: 5 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVWAGRF*ICRNKT
Trigger: AGTCTTGTTCCTGCATATCAAGAACCTGCCTGCCCA...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp TCTTCTTCTCCAACAGTTGATGCCAAGCCATTTTCCAGGTTGGTTCCATCAATTGAAGAACTCACATCATaGTCTTGGTCTTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SSSPTVDAKPFSRLVPSIEELTS*SWSLVE
Trigger: CTCCACCAAAGACCAAGACAATGATGTGAGTTCTTC...AATTGATGGAACCAACCTGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGGTACCACCAGGCTCCTaGGAACTTCTCAGCACAATT +
Preference number: 5 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVVPPGS*ELLSTI
Trigger: AATTGTGCTGAGAAGTTCCAAGGAGCCTGGTGGTAC...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGTGGGCAGGCAGGTTCTaGATATGCAGGAACAAGACT +
Preference number: 5 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKWAGRF*ICRNKT
Trigger: AGTCTTGTTCCTGCATATCAAGAACCTGCCTGCCCA...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTACTTCTTCTCCAACAGTaGATGCCAAGCCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLLLLQQ*MPSHFP
Trigger: TGGAAAATGGCTTGGCATCAACTGTTGGAGAAGAAG...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp GAAATCATATTAAGTTTGTTCTCTGACCCTGATAGAGGTAAGCCAGAAATCAAGAAGTGGAGCCAAGCATaGGAGTCTACACTGGCTATT +
Preference number: 5 (lower is better)
Translates to: EIILSLFSDPDRGKPEIKKWSQA*ESTLAI
Trigger: AATAGCCAGTGTAGACTCCAATGCTTGGCTCCACTT...CTTGATTTCTGGCTTACCTCTATCAGGGTCAGAGAACAAACTTAATATGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS-3UTR CAA 90 bp AAAAATGCTTACCTACTGAGGGACGAAAGTACTATCCCAATAGTGGATTTTGTGAAAGTGGAGCACTTTTaGATAAATACCTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: KNAYLLRDESTIPIVDFVKVEHF*INTLLP
Trigger: GGGGAGCAAGGTATTTATCAAAAAGTGCTCCACTTT...CACAAAATCCACTATTGGGATAGTACTTTCGTCCCTCAGTAGGTAAGCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS-3UTR CAA 90 bp CCAAGCAAGACAAATTCAGAGAAAGTCTCATCCAGGCACCTTGTAGTAAAACTATGTGCCCAGCCTGCTTaGCTTCTTAAAATTAATGTT +
Preference number: 5 (lower is better)
Translates to: PSKTNSEKVSSRHLVVKLCAQPA*LLKINV
Trigger: AACATTAATTTTAAGAAGCAAAGCAGGCTGGGCACA...TAGTTTTACTACAAGGTGCCTGGATGAGACTTTCTCTGAATTTGTCTTGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS GCA 72 bp CGCAGCGCTTGTGGGTGTGGCCTCCCCACTAGCAGGTaGATGTGGAGGGGTCCTGGCCCGTCTAGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: RSACGCGLPTSR*MWRGPGPSRRA
Trigger: GGCCCGCCTAGACGGGCCAGGACCCCTCCACATGCACCTGCTAGTGGGGAGGCCACACCCACAAGCGCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS GCA 72 bp CGAGCCCCCGGGCCATGGTGGCTCCACTCAGCTCCATaGTCTCTGGCCTTTGACTCTGAAGAGTCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: RAPGPWWLHSAP*SLAFDSEESPS
Trigger: GCTGGGGGACTCTTCAGAGTCAAAGGCCAGAGAGCATGGAGCTGAGTGGAGCCACCATGGCCCGGGGGCTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS CCA 72 bp ACAAGACTAGCAGGACAGCGAGCCCCCGGGCCATGGTaGCTCCACTCAGCTCCATGCTCTCTGGCCTTTGAC +
Preference number: 6 (lower is better)
Translates to: TRLAGQRAPGPW*LHSAPCSLAFD
Trigger: GTCAAAGGCCAGAGAGCATGGAGCTGAGTGGAGCCACCATGGCCCGGGGGCTCGCTGTCCTGCTAGTCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS CCA 72 bp GGAACAAGACTAGCAGGACAGCGAGCCCCCGGGCCATaGTGGCTCCACTCAGCTCCATGCTCTCTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: GTRLAGQRAPGP*WLHSAPCSLAF
Trigger: AAAGGCCAGAGAGCATGGAGCTGAGTGGAGCCACCATGGCCCGGGGGCTCGCTGTCCTGCTAGTCTTGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371806.4
CDS GCA 72 bp CATGTGTCCGCAGCCTGGGCAGGCAGGTTCTTGATATaGAGGAACAAGACTAGCAGGACAGCGAGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: HVSAAWAGRFLI*RNKTSRTASPR
Trigger: CCGGGGGCTCGCTGTCCTGCTAGTCTTGTTCCTGCATATCAAGAACCTGCCTGCCCAGGCTGCGGACACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4
CDS CCA 72 bp CCCACCACCTTCACCTCTGGACATGTGTCCGCAGCCTaGGCAGGCAGGTTCTTGATATGCAGGAACAAGACT +
Preference number: 6 (lower is better)
Translates to: PTTFTSGHVSAA*AGRFLICRNKT
Trigger: AGTCTTGTTCCTGCATATCAAGAACCTGCCTGCCCAGGCTGCGGACACATGTCCAGAGGTGAAGGTGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371806.4
ENST00000616356.4