RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCMR (Homo sapiens)

Ensembl gene IDs: ENSG00000162894

Ensembl transcript IDs: ENST00000367091.8, ENST00000442471.4, ENST00000463473.2, ENST00000474041.5, ENST00000525793.5, ENST00000528654.1, ENST00000529560.1, ENST00000530505.1, ENST00000533312.1, ENST00000628511.2

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTCTCCAGGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTaGAGAGGGCTTTCCTCCTTTCAACGGCCCTTTTCACCACCAGCC +
Preference number: 1 (lower is better)
Translates to: SSPGRASSRPVGGPA*RGLSSFQRPFSPPA
Trigger: GGCTGGTGGTGAAAAGGGCCGTTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCCTGGAGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR CCA 90 bp AGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATaGGGCATGGAGCCAGGGAGATTCAGACACCTGCAGCGGGGCGGG +
Preference number: 1 (lower is better)
Translates to: RLVVEAHVFTAGLQR*GMEPGRFRHLQRGG
Trigger: CCCGCCCCGCTGCAGGTGTCTGAATCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR CCA 90 bp TGCAAGACGACCTGGGGGCAGAGCCATGCTCAGGGCACAGATAGATaGGGATGGGAGTCGAGATGGGGCATGGGAAGTGATGAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: CKTTWGQSHAQGTDR*GWESRWGMGSDEGS
Trigger: AGAGCCCTCATCACTTCCCATGCCCCATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR TCA 90 bp GGCTGTAGTGGATGGCAGGAAGGTTCGGGGCTTGTCACCTGCTACTaGAGATGCTCTGGACACTCGAGGGCGGTGGGTGATTTGGGTGGT +
Preference number: 1 (lower is better)
Translates to: GCSGWQEGSGLVTCY*RCSGHSRAVGDLGG
Trigger: ACCACCCAAATCACCCACCGCCCTCGAGTGTCCAGAGCATCTTCAGTAGCAGGTGACAAGCCCCGAACCTTCCTGCCATCCACTACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR GCA 90 bp CAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTaGCAAGGTGTGCAAGACGACCTGGGGGCAGAGCCATGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: QLLYMPTAYLSTTGG*QGVQDDLGAEPCSG
Trigger: CCCTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 90 bp CCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTaGTCTTCAGAGATGGGGCATGGAGCCAGGGAGATTCAGACACCT +
Preference number: 1 (lower is better)
Translates to: PSWRQAGGRGSRIHS*SSEMGHGAREIQTP
Trigger: AGGTGTCTGAATCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR TCA 90 bp ATGCCCGAGACAATAGCTATGCCTCTGCCCCAGCCTGATGCCATGTaGTCTAGAGCCTGGGCAGCAACAACCCTGTGGTCAAAGACATGG +
Preference number: 1 (lower is better)
Translates to: MPETIAMPLPQPDAM*SRAWAATTLWSKTW
Trigger: CCATGTCTTTGACCACAGGGTTGTTGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTGGGGCAGAGGCATAGCTATTGTCTCGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR GCA 90 bp ACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATaGCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGC +
Preference number: 1 (lower is better)
Translates to: TAWKGSKWHWDNCST*LQLTCQLQGAAKVC
Trigger: GCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR GCA 90 bp GTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTaGTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCC +
Preference number: 1 (lower is better)
Translates to: VCSTAWKGSKWHWDN*STCLQLTCQLQGAA
Trigger: GGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 90 bp ATGCTCAGGGCACAGATAGATGGGGATGGGAGTCGAGATGGGGCATaGGAAGTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGA +
Preference number: 1 (lower is better)
Translates to: MLRAQIDGDGSRDGA*EVMRALRTHEAGIG
Trigger: TCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCACTTCCCATGCCCCATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR TCA 90 bp CATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGGAACTCCTaGCTGCTTTCCTTCCCCTGCTTGCTATACATTGTCTGGAACTGG +
Preference number: 1 (lower is better)
Translates to: HDISAIAEPWPPRNS*LLSFPCLLYIVWNW
Trigger: CCAGTTCCAGACAATGTATAGCAAGCAGGGGAAGGAAAGCAGTCAGGAGTTCCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR CCA 90 bp AATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTaGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAG +
Preference number: 1 (lower is better)
Translates to: NPTVCSTAWKGSKWH*DNCSTCLQLTCQLQ
Trigger: CTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 90 bp TCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTaGCATTGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAA +
Preference number: 1 (lower is better)
Translates to: SANPTVCSTAWKGSK*HWDNCSTCLQLTCQ
Trigger: TTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 90 bp ACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTaGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTA +
Preference number: 1 (lower is better)
Translates to: TWKKHSANPTVCSTA*KGSKWHWDNCSTCL
Trigger: TAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 90 bp ATTGTGCCCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGTGTaGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATAAACTGTGGT +
Preference number: 1 (lower is better)
Translates to: IVPHASLPLTILATV*GSGWVLSKYLINCG
Trigger: ACCACAGTTTATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR TCA 90 bp AAAAACAGAGAGGGATGCTTGGATGTAAAACTGAACTTCAGAGCATaGAAATCACACTGTCTTCTGATATCTGCAGGGACAGAGCATTGG +
Preference number: 1 (lower is better)
Translates to: KNREGCLDVKLNFRA*KSHCLLISAGTEHW
Trigger: CCAATGCTCTGTCCCTGCAGATATCAGAAGACAGTGTGATTTTCATGCTCTGAAGTTCAGTTTTACATCCAAGCATCCCTCTCTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR-3UTR TCA 90 bp CCCCTGTGCCTGCAGCGTCCGCTCCACGAGCGCGCCGCGGGCAGGCGCTGTAGAGGGACCTTGCCCCTTTaGGCTGGTGTGGTAACTCTG +
Preference number: 2 (lower is better)
Translates to: PLCLQRPLHERAAGRRCRGTLPL*AGVVTL
Trigger: CAGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCC...TCTACAGCGCCTGCCCGCGGCGCGCTCGTGGAGCGGACGCTGCAGGCACAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR CCA 90 bp CCTGGTGTGGTGGTTGTAGCTGGGCGTCTGGGGCTTGAGCAGCCCCTCCAGAGCGACACTCGAGGGCGGTaGGTGATTTGGGTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PGVVVVAGRLGLEQPLQSDTRGR*VIWVVG
Trigger: CCCCACCACCCAAATCACCCACCGCCCTCGAGTGTC...GCTCTGGAGGGGCTGCTCAAGCCCCAGACGCCCAGCTACAACCACCACACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR TCA 90 bp TCTGGGAGCTCTCCAGGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTGGGGCTCTGAGAACACATaGAGCAGGTATTGGACATCA +
Preference number: 2 (lower is better)
Translates to: SGSSPGRASSRPVGGPAWGSENT*SRYWTS
Trigger: TGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCC...CCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCCTGGAGAGCTCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR CCA 90 bp ACGGCCAGTCGGCGGGCCCGCCTGGAGAGGGCTTTCCTCCTTTCAACGGCCCTTCTACTGAAGATGCTCTaGACACTCGAGGGCGGTGGG +
Preference number: 2 (lower is better)
Translates to: TASRRARLERAFLLSTALLLKML*TLEGGG
Trigger: CCCACCGCCCTCGAGTGTCCAGAGCATCTTCAGTAG...AAGGGCCGTTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR CCA 90 bp GCCATAGTCCAGTGCTCTCTGCCTGTGCAGCCTGGTGTGGTGGTTGTAGCTGGGACCACAGTCCGAGCCTaGGGTTGGGGGATAGCTGGG +
Preference number: 2 (lower is better)
Translates to: AIVQCSLPVQPGVVVVAGTTVRA*GWGIAG
Trigger: CCCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGT...CCCAGCTACAACCACCACACCAGGCTGCACAGGCAGAGAGCACTGGACTATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR CCA 90 bp ATCCTCACGGCCAGTCGGCGGGCCCGCCTGGAGAGGGCTTTCCTCCTTTCAACGGGAAAAGGCCCAGGATaGTCGGGATCAGGATGTGAA +
Preference number: 2 (lower is better)
Translates to: ILTASRRARLERAFLLSTGKGPG*SGSGCE
Trigger: TTCACATCCTGATCCCGACCATCCTGGGCCTTTTCC...CGTTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR CAA 90 bp GCTGAGATTTTTGAGGCTGTAGTGGATGGCAGGAAGGTTCGGGGCTaGTCACCTGCTACTGAAGATGCTCTGGACACTCGAGGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: AEIFEAVVDGRKVRG*SPATEDALDTRGRW
Trigger: CCACCGCCCTCGAGTGTCCAGAGCATCTTCAGTAGCAGGTGACAAGCCCCGAACCTTCCTGCCATCCACTACAGCCTCAAAAATCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR CCA 90 bp GGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAGTGTGCAAGACGACCTaGGGGCAGAGCCATGCTCAG +
Preference number: 2 (lower is better)
Translates to: GTIALHAYSLPVNYRGLPVCKTT*GQSHAQ
Trigger: CTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCACAC...TGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CCA 90 bp GCTTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTGCAGGGACAGAGCATTaGGGTGGGGGTAAGGTGCAT +
Preference number: 2 (lower is better)
Translates to: ASLPLTILATVWGSGWVLAGTEH*GGGKVH
Trigger: ATGCACCTTACCCCCACCCCAATGCTCTGTCCCTGC...AAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR-3UTR CCA 90 bp CCAGAAGTGCCAGCAGGAAAAGGCCCAGGATGGTCGGGATCAGGATGTGAAATCTCTGCCTGTGCAGCCTaGTGTGGTGGTTGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: PEVPAGKGPGWSGSGCEISACAA*CGGCSW
Trigger: CCAGCTACAACCACCACACCAGGCTGCACAGGCAGA...GATTTCACATCCTGATCCCGACCATCCTGGGCCTTTTCCTGCTGGCACTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR CCA 90 bp ATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTACCACAGTCCGAGCCTaGGGTTGGGGGATAGCTGGG +
Preference number: 2 (lower is better)
Translates to: IPQSVRRLGKEASGIGTITTVRA*GWGIAG
Trigger: CCCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGT...AATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CCA 90 bp ATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACGGATGGGAGTCGAGATaGGGCATGGGAAGTGATGAG +
Preference number: 2 (lower is better)
Translates to: MPTAYLSTTGGCQGVQDDGWESR*GMGSDE
Trigger: CTCATCACTTCCCATGCCCCATCTCGACTCCCATCC...GTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CCA 90 bp ACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGCACCACGGGCGGTGGGTGATTTaGGTGGTGGGGGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: THEAGIGHQQIDETPWHHGRWVI*VVGEEW
Trigger: CCACTCCTCCCCCACCACCCAAATCACCCACCGCCC...GTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR CCA 90 bp CCTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACACCACAGTCCGAGCCTaGGGTTGGGGGATAGCTGGG +
Preference number: 2 (lower is better)
Translates to: PVVKDMEETLCKSHSLFDTTVRA*GWGIAG
Trigger: CCCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGT...GTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CCA 90 bp ACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCGTGTGCAAGACGACCTaGGGGCAGAGCCATGCTCAG +
Preference number: 2 (lower is better)
Translates to: TARKGLLPNSKAVHLASSVCKTT*GQSHAQ
Trigger: CTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCACAC...GCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR-3UTR CCA 90 bp CAGATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCTCACGTATTCACAGCTaGTCTTCAGAGATGGGGCAT +
Preference number: 2 (lower is better)
Translates to: QIDETPWHHSPSLGLGDSSRIHS*SSEMGH
Trigger: ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGA...GCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR GCA 90 bp GGGGAGATGCTGAGGTCAGGGCACTTATGTGCATCAAGTGATGGAGACAGAGTATCAACTACAGGGGGCTaGCAAGGTGTGCAAGACGAC +
Preference number: 2 (lower is better)
Translates to: GEMLRSGHLCASSDGDRVSTTGG*QGVQDD
Trigger: GTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGA...TACTCTGTCTCCATCACTTGATGCACATAAGTGCCCTGACCTCAGCATCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR-3UTR CCA 90 bp GGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAACAGATAGATGGGGATaGGAGTCGAGATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: GTIALHAYSLPVNYRGLPTDRWG*ESRWGM
Trigger: CATGCCCCATCTCGACTCCCATCCCCATCTATCTGT...TGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CCA 90 bp GACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGCAGGGCACAGATAGATaGGGATGGGAGTCGAGATGG +
Preference number: 2 (lower is better)
Translates to: DNCSTCLQLTCQLQGAAKQGTDR*GWESRW
Trigger: CCATCTCGACTCCCATCCCCATCTATCTGTGCCCTG...CTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CAA 90 bp AGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATaGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: SLFDGLERKQVALGQ*LYMPTAYLSTTGGC
Trigger: GCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CCA 90 bp TCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGACAATAGCTATGCCCAGGGCACAGATAGATaGGGATGGGAGTCGAGATGG +
Preference number: 2 (lower is better)
Translates to: SICVRPNPGKDARDNSYAQGTDR*GWESRW
Trigger: CCATCTCGACTCCCATCCCCATCTATCTGTGCCCTG...GGCATAGCTATTGTCTCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR TCA 90 bp CGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCACATCAGCAGATAGATaGGACTCCTTGGCACCACAG +
Preference number: 2 (lower is better)
Translates to: RLGKEASGIGTIALHAYSTSADR*DSLAPQ
Trigger: CTGTGGTGCCAAGGAGTCTCATCTATCTGCTGATGT...GCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR TCA 90 bp CTTTCCTTCCCCTGCTTGCTATACATTGTCTGGAACTGGCTAAGAAATGGGGAACAGCCTGATGCCATGTaGTCTAGAGCCTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: LSFPCLLYIVWNWLRNGEQPDAM*SRAWAA
Trigger: TGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTG...TTCCCCATTTCTTAGCCAGTTCCAGACAATGTATAGCAAGCAGGGGAAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR-3UTR CCA 90 bp ATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTATAGATGAGACTCCTTaGCACCACAGTCCGAGCCTG +
Preference number: 2 (lower is better)
Translates to: IPQSVRRLGKEASGIGTIIDETP*HHSPSL
Trigger: CAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT...AATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CCA 90 bp GAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACATAGATGAGACTCCTTaGCACCACAGTCCGAGCCTG +
Preference number: 2 (lower is better)
Translates to: EASGIGTIALHAYSLPVNIDETP*HHSPSL
Trigger: CAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT...GTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR TCA 90 bp ACATTTGGATCAGGGCAAAGGCGTTTCCAGGAGTGTTTTTATACCAGACCCCTGACATCAGCAGATAGATaGGACTCCTTGGCACCACAG +
Preference number: 2 (lower is better)
Translates to: TFGSGQRRFQECFYTRPLTSADR*DSLAPQ
Trigger: CTGTGGTGCCAAGGAGTCTCATCTATCTGCTGATGT...CAGGGGTCTGGTATAAAAACACTCCTGGAAACGCCTTTGCCCTGATCCAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR-3UTR CCA 90 bp GTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATACAGATAGATGGGGATaGGAGTCGAGATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: VMRALRTHEAGIGHQQIDTDRWG*ESRWGM
Trigger: CATGCCCCATCTCGACTCCCATCCCCATCTATCTGT...ATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR TCA 90 bp ACATTTGGATCAGGGCAAAGGCGTTTCCAGGAGTGTTTTTATACCAGACCCCTGGGCTCTGAGAACACATaGAGCAGGTATTGGACATCA +
Preference number: 2 (lower is better)
Translates to: TFGSGQRRFQECFYTRPLGSENT*SRYWTS
Trigger: TGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCC...CAGGGGTCTGGTATAAAAACACTCCTGGAAACGCCTTTGCCCTGATCCAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR-3UTR TCA 90 bp CCTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTCTGAGAACACATaGAGCAGGTATTGGACATCA +
Preference number: 2 (lower is better)
Translates to: PVVKDMEETLCKSHSLFDGSENT*SRYWTS
Trigger: TGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCC...GTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR GCA 90 bp ACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCTGGCATTGGGACAATTaGTCTACATGCCTACAGCTT +
Preference number: 2 (lower is better)
Translates to: TARKGLLPNSKAVHLASSWHWDN*STCLQL
Trigger: AAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCA...GCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR CCA 72 bp TTTTGGGAGCGCGGTCGCGGCGACCCGCGGGGCCTCTaGGAGCTCTCCAGGGCGCGCATCCTCACGGCCAGT +
Preference number: 3 (lower is better)
Translates to: FWERGRGDPRGL*ELSRARILTAS
Trigger: ACTGGCCGTGAGGATGCGCGCCCTGGAGAGCTCCCAGAGGCCCCGCGGGTCGCCGCGACCGCGCTCCCAAAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR-3UTR CAA 90 bp TCTGGGAGCTCTCCAGGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTGGCAGGATGTGAAATCCTaGGCCTTCCCTCCCAGACTG +
Preference number: 3 (lower is better)
Translates to: SGSSPGRASSRPVGGPAWQDVKS*AFPPRL
Trigger: CAGTCTGGGAGGGAAGGCCAAGGATTTCACATCCTG...CCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCCTGGAGAGCTCCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR CCA 72 bp GGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTaGAGAGGGCTTTCCTCCTTTCAACGGCCCTTTTCA +
Preference number: 3 (lower is better)
Translates to: GRASSRPVGGPA*RGLSSFQRPFS
Trigger: TGAAAAGGGCCGTTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR CCA 72 bp GGGCAGAGCCATGCTCAGGGCACAGATAGATGGGGATaGGAGTCGAGATGGGGCATGGGAAGTGATGAGGGC +
Preference number: 3 (lower is better)
Translates to: GQSHAQGTDRWG*ESRWGMGSDEG
Trigger: GCCCTCATCACTTCCCATGCCCCATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCATGGCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 72 bp CAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTaGGGGCAGAGCCATGCTCAGGGCACAGATAGATGG +
Preference number: 3 (lower is better)
Translates to: QLQGAAKVCKTT*GQSHAQGTDRW
Trigger: CCATCTATCTGTGCCCTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 72 bp ACCTGGGGGCAGAGCCATGCTCAGGGCACAGATAGATaGGGATGGGAGTCGAGATGGGGCATGGGAAGTGAT +
Preference number: 3 (lower is better)
Translates to: TWGQSHAQGTDR*GWESRWGMGSD
Trigger: ATCACTTCCCATGCCCCATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCATGGCTCTGCCCCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 72 bp CCAGCCCCAGAAGTGCCAGCAGGAAAAGGCCCAGGATaGTCGGGATCAGGATGTGAAATCCTTGGCCTTCCC +
Preference number: 3 (lower is better)
Translates to: PAPEVPAGKGPG*SGSGCEILGLP
Trigger: GGGAAGGCCAAGGATTTCACATCCTGATCCCGACCATCCTGGGCCTTTTCCTGCTGGCACTTCTGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR GCA 72 bp TACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTaGCAAGGTGTGCAAGACGACCTGGGGGCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: YMPTAYLSTTGG*QGVQDDLGAEP
Trigger: TGGCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 72 bp CGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTaGTCTTCAGAGATGGGGCATGGAGCCAGGGAGATT +
Preference number: 3 (lower is better)
Translates to: RQAGGRGSRIHS*SSEMGHGAREI
Trigger: AATCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR TCA 72 bp CAGGATGTGAAATCCTTGGCCTTCCCTCCCAGACTGTaGGCCATAGTCCAGTGCTCTCTGCCTGTGCAGCCT +
Preference number: 3 (lower is better)
Translates to: QDVKSLAFPPRL*AIVQCSLPVQP
Trigger: AGGCTGCACAGGCAGAGAGCACTGGACTATGGCTCACAGTCTGGGAGGGAAGGCCAAGGATTTCACATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
3UTR CCA 72 bp GCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTaGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGC +
Preference number: 3 (lower is better)
Translates to: AGIGHQQIDETP*HHSPSLGLGDS
Trigger: GCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
3UTR-3UTR CAA 90 bp CCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGGTGGCATTGGGACAATaGCTCTACATGCCTACAGCT +
Preference number: 3 (lower is better)
Translates to: PMLLYPSQSLPQCGAVDGVALGQ*LYMPTA
Trigger: AGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCAC...CCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR-3UTR CAA 90 bp AGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGAAGTCTGTTCGACGGCTaGGAAAGGAAGCAAGTGGCA +
Preference number: 3 (lower is better)
Translates to: RARAFYLCKTQPWEGCPRSLFDG*ERKQVA
Trigger: TGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACT...TCTCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR GCA 72 bp AAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATaGCTACAGCTTACCTGTCAACTACAGGGGGCTGCC +
Preference number: 3 (lower is better)
Translates to: KGSKWHWDNCST*LQLTCQLQGAA
Trigger: GGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 72 bp AGAGCCTGGGCAGCAACAACCCTGTGGTCAAAGACATaGAAGAAACACTCTGCAAATCCCACAGTCTGTTCG +
Preference number: 3 (lower is better)
Translates to: RAWAATTLWSKT*KKHSANPTVCS
Trigger: CGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAGGGTTGTTGCTGCCCAGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CAA 90 bp TCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGACAATAGCTATGCCGTGGCATTGGGACAATaGCTCTACATGCCTACAGCT +
Preference number: 3 (lower is better)
Translates to: SICVRPNPGKDARDNSYAVALGQ*LYMPTA
Trigger: AGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCAC...GGCATAGCTATTGTCTCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 72 bp GTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTaGGACAATTGCTCTACATGCCTACAGCTTACCTGT +
Preference number: 3 (lower is better)
Translates to: VCSTAWKGSKWH*DNCSTCLQLTC
Trigger: ACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR TCA 72 bp CAAAGAGTATATGTAGGAGGTGGGATATCACTTCCATaGCATAAGTGCTATTGCAGAGCCGTGGCCACCCAG +
Preference number: 3 (lower is better)
Translates to: QRVYVGGGISLP*HKCYCRAVATQ
Trigger: CTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCACCTCCTACATATACTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR GCA 72 bp ACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTaGTCTACATGCCTACAGCTTACCTGTCAACTACAG +
Preference number: 3 (lower is better)
Translates to: TAWKGSKWHWDN*STCLQLTCQLQ
Trigger: CTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CCA 72 bp AAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTaGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCT +
Preference number: 3 (lower is better)
Translates to: KHSANPTVCSTA*KGSKWHWDNCS
Trigger: AGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR-3UTR CAA 90 bp AACCCTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCAGGAAGCAAGTGGCATaGGGACAATTGCTCTACATG +
Preference number: 3 (lower is better)
Translates to: NPVVKDMEETLCKSHSLFRKQVA*GQLLYM
Trigger: CATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCT...GAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR GCA 72 bp GTAAGTTACATGAAGGCAGCAGAATATTGTGCCCCATaGTTCTTTACCCCTCACAATCCTTGCCACAGTGTG +
Preference number: 3 (lower is better)
Translates to: VSYMKAAEYCAP*FFTPHNPCHSV
Trigger: CACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGGGCACAATATTCTGCTGCCTTCATGTAACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR CCA 72 bp CATGCTTCTTTACCCCTCACAATCCTTGCCACAGTGTaGGGCAGTGGATGGGTGCTTAGTAAGTACTTAATA +
Preference number: 3 (lower is better)
Translates to: HASLPLTILATV*GSGWVLSKYLI
Trigger: TATTAAGTACTTACTAAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR CAA 72 bp ACGAGCGCGCCGCGGGCAGGCGCTGTAGATGTTGTTTaGGGAGCGCGGTCGCGGCGACCCGCGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TSAPRAGAVDVV*GARSRRPAGPL
Trigger: CAGAGGCCCCGCGGGTCGCCGCGACCGCGCTCCCAAAACAACATCTACAGCGCCTGCCCGCGGCGCGCTCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp CTCCCCTGTGCCTGCAGCGTCCGCTCCACGAGCGCGCCGCGGGCAGGCGCTGTAGGGCGGTGGGTGATTTaGGTGGTGGGGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LPCACSVRSTSAPRAGAVGRWVI*VVGEEW
Trigger: CCACTCCTCCCCCACCACCCAAATCACCCACCGCCC...TACAGCGCCTGCCCGCGGCGCGCTCGTGGAGCGGACGCTGCAGGCACAGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp TCTGGGAGCTCTCCAGGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTGGGACACTCGAGGGCGGTaGGTGATTTGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SGSSPGRASSRPVGGPAWDTRGR*VIWVVG
Trigger: CCCCACCACCCAAATCACCCACCGCCCTCGAGTGTC...CCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCCTGGAGAGCTCCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp TCTGGGAGCTCTCCAGGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTGGCACTGTCCTCCATCATaGCGGCAGGCTGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SGSSPGRASSRPVGGPAWHCPPS*RQAGGR
Trigger: TCTACCACCAGCCTGCCGCCATGATGGAGGACAGTG...CCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCCTGGAGAGCTCCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp TGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGCGGGGGCCTCCCCTGTaGCTGCAGCGTCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CPPSWRQAGGRGSRIHSWRGPPL*LQRPLH
Trigger: GTGGAGCGGACGCTGCAGGCACAGGGGAGGCCCCCG...CCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp CCTGGTGTGGTGGTTGTAGCTGGGCGTCTGGGGCTTGAGCAGCCCCTCCAGAGCACCACAGTCCGAGCCTaGGGTTGGGGGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGVVVVAGRLGLEQPLQSTTVRA*GWGIAG
Trigger: CCCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGT...GCTCTGGAGGGGCTGCTCAAGCCCCAGACGCCCAGCTACAACCACCACACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR TCA 90 bp GCATCCTCACGGCCAGTCGGCGGGCCCGCCTGGAGAGGGCTTTCCTCCTTTCAAGCACTTGATGGTAACTaGTCCGCCCAGCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: ASSRPVGGPAWRGLSSFQALDGN*SAQLPL
Trigger: GAGGGGGAGCTGGGCGGATCAGTTACCATCAAGTGC...TTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGAGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp CCCCTGTGCCTGCAGCGTCCGCTCCACGAGCGCGCCGCGGGCAGGCGCTGTAGATCACGTATTCACAGCTaGTCTTCAGAGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLCLQRPLHERAAGRRCRSRIHS*SSEMGH
Trigger: ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGA...TCTACAGCGCCTGCCCGCGGCGCGCTCGTGGAGCGGACGCTGCAGGCACAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp GAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGAGAGTCGGCGGGCCCGCCTaGAGAGGGCTCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: EAHVFTAGLQRWGMEPGRVGGPA*RGLCLC
Trigger: GCACAGGCAGAGCCCTCTCCAGGCGGGCCCGCCGAC...TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628511.2
CDS-3UTR TCA 90 bp CCTGGGGGCAGAGCCATGCTCAGGGCACAGATAGATGGGGATGGGAGTCGAGATGTGGGGGAGGAGTGGTaGACTGGAGGGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGGRAMLRAQIDGDGSRDVGEEW*TGGTLP
Trigger: GGGCAAGGTCCCTCCAGTTCACCACTCCTCCCCCAC...ATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCATGGCTCTGCCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp ACGGCCAGTCGGCGGGCCCGCCTGGAGAGGGCTTTCCTCCTTTCAACGGCCCTTTTCCCTCCCAGACTGTaGGCCATAGTCCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TASRRARLERAFLLSTALFPPRL*AIVQCS
Trigger: AGAGCACTGGACTATGGCTCACAGTCTGGGAGGGAA...AAGGGCCGTTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp CCCCTGTGCCTGCAGCGTCCGCTCCACGAGCGCGCCGCGGGCAGGCGCTGTAGACTAGGAACAGATTCTTaGGTGGGTATTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PLCLQRPLHERAAGRRCRLGTDS*VGIASE
Trigger: CTCTGAAGCAATACCCACGCAAGAATCTGTTCCTAG...TCTACAGCGCCTGCCCGCGGCGCGCTCGTGGAGCGGACGCTGCAGGCACAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp CCCCTGTGCCTGCAGCGTCCGCTCCACGAGCGCGCCGCGGGCAGGCGCTGTAGACAGATGAAACCATTTTaGAGTCTCAGGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLCLQRPLHERAAGRRCRQMKPF*SLRHWL
Trigger: CAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTG...TCTACAGCGCCTGCCCGCGGCGCGCTCGTGGAGCGGACGCTGCAGGCACAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp ACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCAGAGCCACCAGCCCCAGAAGTaGCAGCAGGAAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TCQLQGAAKVCKTTWGQSHQPQK*QQEKAQ
Trigger: CTGGGCCTTTTCCTGCTGGCACTTCTGGGGCTGGTG...GCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp TGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCCGGGGGCCTCCCCTGTaGCTGCAGCGTCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: WDNCSTCLQLTCQLQGAARGPPL*LQRPLH
Trigger: GTGGAGCGGACGCTGCAGGCACAGGGGAGGCCCCCG...GGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp CACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCGCCTGGAGAGGGCTCTaGCTGTGCAGCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: HCPPSWRQAGGRGSRIHSAWRGL*LCSLVW
Trigger: CCACACCAGGCTGCACAGGCAGAGCCCTCTCCAGGC...GCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628511.2
CDS-3UTR TCA 90 bp GGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCGTGGGGGAGGAGTGGTaGACTGGAGGGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GGRGSRIHSWSSEMGHGAVGEEW*TGGTLP
Trigger: GGGCAAGGTCCCTCCAGTTCACCACTCCTCCCCCAC...GGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR TCA 90 bp AGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGAGGTGGGGGAGGAGTGGTaGACTGGAGGGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RGSRIHSWSSEMGHGAREVGEEW*TGGTLP
Trigger: GGGCAAGGTCCCTCCAGTTCACCACTCCTCCCCCAC...CTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR GCA 90 bp ACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCAGAGCAGTGCTCTCTGCCTGTaGAGCCTGGTGTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TCQLQGAAKVCKTTWGQSSALCL*SLVWWL
Trigger: CAACCACCACACCAGGCTGCACAGGCAGAGAGCACT...GCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCGGGCGGTGGGTGATTTaGGTGGTGGGGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GGRGSRIHSWSSEMGHGAGRWVI*VVGEEW
Trigger: CCACTCCTCCCCCACCACCCAAATCACCCACCGCCC...GGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp CCTGGTGTGGTGGTTGTAGCTGGGCGTCTGGGGCTTGAGCAGCCCCTCCAGAGCTTCAGAGATGGGGCATaGAGCCAGGGAGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: PGVVVVAGRLGLEQPLQSFRDGA*SQGDSD
Trigger: GTCTGAATCTCCCTGGCTCCATGCCCCATCTCTGAA...GCTCTGGAGGGGCTGCTCAAGCCCCAGACGCCCAGCTACAACCACCACACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp CCTGGGGGCAGAGCCATGCTCAGGGCACAGATAGATGGGGATGGGAGTCGAGATGTGTGCAAGACGACCTaGGGGCAGAGCCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGGRAMLRAQIDGDGSRDVCKTT*GQSHAQ
Trigger: CTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCACAC...ATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCATGGCTCTGCCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp ATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCTGGGCACTTGATGGTAACTaGTCCGCCCAGCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: IDETPWHHSPSLGLGDSWALDGN*SAQLPL
Trigger: GAGGGGGAGCTGGGCGGATCAGTTACCATCAAGTGC...CCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000463473.2
CDS-3UTR GCA 90 bp TGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGCCCGGTCTGTGTTCATaGCCGCTCCGCAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: CPPSWRQAGGRGSRIHSWPGLCS*PLRRHR
Trigger: TCTATGCCTGCGGAGCGGGCATGAACACAGACCGGG...CCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628511.2
CDS-3UTR CCA 90 bp TGTGCCTGCAGCGTCCGCTCCACGAGCGCGCCGCGGGCAGGCGCTGTAGATGTTCGAATTTGGAAGAACTaGCATATGCAGGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: CACSVRSTSAPRAGAVDVRIWKN*HMQASG
Trigger: TCCAGATGCCTGCATATGCCAGTTCTTCCAAATTCG...AACATCTACAGCGCCTGCCCGCGGCGCGCTCGTGGAGCGGACGCTGCAGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp CCTGGGGGCAGAGCCATGCTCAGGGCACAGATAGATGGGGATGGGAGTCGAGATGGAGGAGTGGTGAACTaGAGGGACCTTGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PGGRAMLRAQIDGDGSRDGGVVN*RDLAPL
Trigger: CAAAGGGGCAAGGTCCCTCCAGTTCACCACTCCTCC...ATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCATGGCTCTGCCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp AATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACGTCGGCGGGCCCGCCTaGAGAGGGCTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NHCPPSWRQAGGRGSRIHVGGPA*RGLSSF
Trigger: AAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGAC...GTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp AGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCGGGTTGGGGGATAGCTaGGGAGTTGTCAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLPVNYRGLPRCARRPGGGLGDS*GVVRQE
Trigger: TTCCTGCCTGACAACTCCCCAGCTATCCCCCAACCC...GCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp GCATCCTCACGGCCAGTCGGCGGGCCCGCCTGGAGAGGGCTTTCCTCCTTTCAATCGGCCCTTGTATTCTaGCTTGATGAAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ASSRPVGGPAWRGLSSFQSALVF*LDEVGG
Trigger: ACCACCAACTTCATCAAGGCAGAATACAAGGGCCGA...TTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGAGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp AAAGGCCCAGGATGGTCGGGATCAGGATGTGAAATCCTTGGCCTTCCCTCCCAGCACCAGCCCCAGAAGTaGCAGCAGGAAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KGPGWSGSGCEILGLPSQHQPQK*QQEKAQ
Trigger: CTGGGCCTTTTCCTGCTGGCACTTCTGGGGCTGGTG...CTGGGAGGGAAGGCCAAGGATTTCACATCCTGATCCCGACCATCCTGGGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp ACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGACGGGGGCCTCCCCTGTaGCTGCAGCGTCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TWKKHSANPTVCSTAWKGRGPPL*LQRPLH
Trigger: GTGGAGCGGACGCTGCAGGCACAGGGGAGGCCCCCG...TCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GCCATAGTCCAGTGCTCTCTGCCTGTGCAGCCTGGTGTGGTGGTTGTAGCTGGGCTCTACCTTTACTTCTaGGAGGATCCTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AIVQCSLPVQPGVVVVAGLYLYF*EDPQGP
Trigger: GGGGCCCTGAGGATCCTCCCAGAAGTAAAGGTAGAG...CCCAGCTACAACCACCACACCAGGCTGCACAGGCAGAGAGCACTGGACTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp AGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGACACTCGAGGGCGGTaGGTGATTTGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLVVEAHVFTAGLQRWGMDTRGR*VIWVVG
Trigger: CCCCACCACCCAAATCACCCACCGCCCTCGAGTGTC...CATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp CTCTGCCCCAGCCTGATGCCATGTGATCTAGAGCCTGGGCAGCAACAACCCTGTTCTGCCTGTGCAGCCTaGTGTGGTGGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCPSLMPCDLEPGQQQPCSACAA*CGGCSW
Trigger: CCAGCTACAACCACCACACCAGGCTGCACAGGCAGA...ACAGGGTTGTTGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTGGGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp CAGCAGATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATGCTGGTCTTCAGAGATaGGGCATGGAGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QQIDETPWHHSPSLGLGDAGLQR*GMEPGR
Trigger: TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGC...ATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp CCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCAGAGCCTCTAGCCTCAAGCTCTaGCTGAACTTTGTGGTCGAC +
Preference number: 4 (lower is better)
Translates to: PVNYRGLPRCARRPGGRASSLKL*LNFVVD
Trigger: GTCGACCACAAAGTTCAGCCAGAGCTTGAGGCTAGA...GGCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp CTGAATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTGCACTTGATGGTAACTaGTCCGCCCAGCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: LNHCPPSWRQAGGRGSRIALDGN*SAQLPL
Trigger: GAGGGGGAGCTGGGCGGATCAGTTACCATCAAGTGC...AATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGATTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR TCA 90 bp TACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGGACCTTGCCCCTTTaGGCTGGTGTGGTAACTCTG +
Preference number: 4 (lower is better)
Translates to: YSLPVNYRGLPRCARRPGGTLPL*AGVVTL
Trigger: CAGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCC...CCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp GAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGAGAGGGACCTTGCCCCTTTaGGCTGGTGTGGTAACTCTG +
Preference number: 4 (lower is better)
Translates to: EAHVFTAGLQRWGMEPGRGTLPL*AGVVTL
Trigger: CAGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCC...TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR TCA 90 bp TCAGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGTGGGGGAGGAGTGGTaGACTGGAGGGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SEQEPSICVRPNPGKDARVGEEW*TGGTLP
Trigger: GGGCAAGGTCCCTCCAGTTCACCACTCCTCCCCCAC...TCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp GTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATCGGGGGCCTCCCCTGTaGCTGCAGCGTCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VMRALRTHEAGIGHQQIDRGPPL*LQRPLH
Trigger: GTGGAGCGGACGCTGCAGGCACAGGGGAGGCCCCCG...ATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp TCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGGGAGGAGTGGTGAACTaGAGGGACCTTGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SWRQAGGRGSRIHSWSSEGGVVN*RDLAPL
Trigger: CAAAGGGGCAAGGTCCCTCCAGTTCACCACTCCTCC...CTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp GGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGGCGGTGGGTGATTTaGGTGGTGGGGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GQLLYMPTAYLSTTGGCQGRWVI*VVGEEW
Trigger: CCACTCCTCCCCCACCACCCAAATCACCCACCGCCC...TTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGGGACACTCGAGGGCGGTaGGTGATTTGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VGYHFHDISAIAEPWPPRDTRGR*VIWVVG
Trigger: CCCCACCACCCAAATCACCCACCGCCCTCGAGTGTC...CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp TCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGTCTGCCTGTGCAGCCTaGTGTGGTGGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SWRQAGGRGSRIHSWSSESACAA*CGGCSW
Trigger: CCAGCTACAACCACCACACCAGGCTGCACAGGCAGA...CTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp AAAGGCCCAGGATGGTCGGGATCAGGATGTGAAATCCTTGGCCTTCCCTCCCAGGCTGGTCTTCAGAGATaGGGCATGGAGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KGPGWSGSGCEILGLPSQAGLQR*GMEPGR
Trigger: TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGC...CTGGGAGGGAAGGCCAAGGATTTCACATCCTGATCCCGACCATCCTGGGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp TGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCACCACAGTCCGAGCCTaGGGTTGGGGGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WDNCSTCLQLTCQLQGAATTVRA*GWGIAG
Trigger: CCCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGT...GGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp GTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGACCTTGCCCCTTTaGGCTGGTGTGGTAACTCTG +
Preference number: 4 (lower is better)
Translates to: VVEAHVFTAGLQRWGMEPGTLPL*AGVVTL
Trigger: CAGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCC...TGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR TCA 90 bp CCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTTCCCTCCCAGACTGTaGGCCATAGTCCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PMLLYPSQSLPQCGAVDGFPPRL*AIVQCS
Trigger: AGAGCACTGGACTATGGCTCACAGTCTGGGAGGGAA...CCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp CCCAGCCTGATGCCATGTGATCTAGAGCCTGGGCAGCAACAACCCTGTGGTCAATTCCCTCCCAGACTGTaGGCCATAGTCCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSLMPCDLEPGQQQPCGQFPPRL*AIVQCS
Trigger: AGAGCACTGGACTATGGCTCACAGTCTGGGAGGGAA...TTGACCACAGGGTTGTTGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp TGGAGAGGGCTTTCCTCCTTTCAACGGCCCTTTTCACCACCAGCCCCAGAAGTGGTCGGGATCAGGATGTaGAATCCTTGGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: WRGLSSFQRPFSPPAPEVVGIRM*NPWPSL
Trigger: GAGGGAAGGCCAAGGATTTCACATCCTGATCCCGAC...CACTTCTGGGGCTGGTGGTGAAAAGGGCCGTTGAAAGGAGGAAAGCCCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR TCA 90 bp AGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCACATCAGCAGATAGATaGGACTCCTTGGCACCACAG +
Preference number: 4 (lower is better)
Translates to: SLPVNYRGLPRCARRPGGTSADR*DSLAPQ
Trigger: CTGTGGTGCCAAGGAGTCTCATCTATCTGCTGATGT...GCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp TGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCCCACCCAGGAACTCCTaGCTGCTTTCCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WDNCSTCLQLTCQLQGAAPPRNS*LLSFPC
Trigger: GCAGGGGAAGGAAAGCAGTCAGGAGTTCCTGGGTGG...GGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp GGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCACCCGGTCTGTGTTCATaGCCGCTCCGCAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: GTIALHAYSLPVNYRGLPPGLCS*PLRRHR
Trigger: TCTATGCCTGCGGAGCGGGCATGAACACAGACCGGG...TGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp TCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGGTCTCAGGCATTGGCTaGTCTTCCCATGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: SWRQAGGRGSRIHSWSSEVSGIG*SSHDGS
Trigger: CGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGAC...CTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp GAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGAGACTCTACCTTTACTTCTaGGAGGATCCTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EAHVFTAGLQRWGMEPGRLYLYF*EDPQGP
Trigger: GGGGCCCTGAGGATCCTCCCAGAAGTAAAGGTAGAG...TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp TGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTTCAGGGTGACTTTCTaGGTCTTTCCCCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CPPSWRQAGGRGSRIHSWFRVTF*VFPRSV
Trigger: CACAGACCGGGGAAAGACCCAGAAAGTCACCCTGAA...CCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628511.2
CDS-3UTR CCA 90 bp GGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGACACTCGAGGGCGGTaGGTGATTTGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GQLLYMPTAYLSTTGGCQDTRGR*VIWVVG
Trigger: CCCCACCACCCAAATCACCCACCGCCCTCGAGTGTC...TTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp TGTAGTCATCTGAATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCCTACTGAAGATGCTCTaGACACTCGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSHLNHCPPSWRQAGGRGLLKML*TLEGGG
Trigger: CCCACCGCCCTCGAGTGTCCAGAGCATCTTCAGTAG...GCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGATTCAGATGACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp ATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACATCTGCCTGTGCAGCCTaGTGTGGTGGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: ITVLHHGGRLVVEAHVFTSACAA*CGGCSW
Trigger: CCAGCTACAACCACCACACCAGGCTGCACAGGCAGA...TGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp TGTAGTCATCTGAATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCGCTGGTCTTCAGAGATaGGGCATGGAGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CSHLNHCPPSWRQAGGRGAGLQR*GMEPGR
Trigger: TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGC...GCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGATTCAGATGACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp GTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCACACTGTCCTCCATCATaGCGGCAGGCTGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VVEAHVFTAGLQRWGMEPHCPPS*RQAGGR
Trigger: TCTACCACCAGCCTGCCGCCATGATGGAGGACAGTG...TGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp GGCTTTCCTCCTTTCAACGGCCCTTTTCACCACCAGCCCCAGAAGTGCCAGCAGATAGATGAGACTCCTTaGCACCACAGTCCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GFPPFNGPFHHQPQKCQQIDETP*HHSPSL
Trigger: CAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT...CTGCTGGCACTTCTGGGGCTGGTGGTGAAAAGGGCCGTTGAAAGGAGGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp CCCAGCCTGATGCCATGTGATCTAGAGCCTGGGCAGCAACAACCCTGTGGTCAAGGATGGGAGTCGAGATaGGGCATGGGAAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: PSLMPCDLEPGQQQPCGQGWESR*GMGSDE
Trigger: CTCATCACTTCCCATGCCCCATCTCGACTCCCATCC...TTGACCACAGGGTTGTTGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp TACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGTGTGGACATTCAGGGTaGCTTTCTGGGTCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: YSLPVNYRGLPRCARRPGCGHSG*LSGSFP
Trigger: GGGGAAAGACCCAGAAAGTCACCCTGAATGTCCACA...CCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp GCATCCTCACGGCCAGTCGGCGGGCCCGCCTGGAGAGGGCTTTCCTCCTTTCAAATTGATGTAGTCATCTaGATCACTGTCCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: ASSRPVGGPAWRGLSSFQIDVVI*ITVLHH
Trigger: ATGATGGAGGACAGTGATTCAGATGACTACATCAAT...TTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp TGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGATGGAGACACGCTaGTTACTCAGGAACCCTTCA +
Preference number: 4 (lower is better)
Translates to: WRQAGGRGSRIHSWSSEMGMETR*LLRNPS
Trigger: TGAAGGGTTCCTGAGTAAGCAGCGTGTCTCCATCCC...CATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp ATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACGTCTCAGGCATTGGCTaGTCTTCCCATGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: MPTAYLSTTGGCQGVQDDVSGIG*SSHDGS
Trigger: CGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGAC...GTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp AATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACGTCTCAGGCATTGGCTaGTCTTCCCATGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: NHCPPSWRQAGGRGSRIHVSGIG*SSHDGS
Trigger: CGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGAC...GTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR GCA 90 bp ACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCAGAGCTGGCATTGGGACAATTaGTCTACATGCCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: TCQLQGAAKVCKTTWGQSWHWDN*STCLQL
Trigger: AAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCA...GCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp CTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGCAGGGCCCCCGATACTaGCAGGAAGTAAAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LQIPQSVRRLGKEASGIGQGPRY*QEVKWP
Trigger: TGGCCACTTTACTTCCTGCCAGTATCGGGGGCCCTG...CCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp GTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGGGCGGTGGGTGATTTaGGTGGTGGGGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VKDMEETLCKSHSLFDGLGRWVI*VVGEEW
Trigger: CCACTCCTCCCCCACCACCCAAATCACCCACCGCCC...CAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GAGATTTTTGAGGCTGTAGTGGATGGCAGGAAGGTTCGGGGCTTGTCACCTGCTCTACTGAAGATGCTCTaGACACTCGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: EIFEAVVDGRKVRGLSPALLKML*TLEGGG
Trigger: CCCACCGCCCTCGAGTGTCCAGAGCATCTTCAGTAG...AGCAGGTGACAAGCCCCGAACCTTCCTGCCATCCACTACAGCCTCAAAAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp GAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGAGAGGAAAAGGCCCAGGATaGTCGGGATCAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: EAHVFTAGLQRWGMEPGRGKGPG*SGSGCE
Trigger: TTCACATCCTGATCCCGACCATCCTGGGCCTTTTCC...TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp TACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGATAGATGAGACTCCTTaGCACCACAGTCCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: YSLPVNYRGLPRCARRPGIDETP*HHSPSL
Trigger: CAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT...CCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTaGGGGCAGAGCCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: DNCSTCLQLTCQLQGAAKVCKTT*GQSHAQ
Trigger: CTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCACAC...CTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp GTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCATGTGGACATTCAGGGTaGCTTTCTGGGTCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: VVEAHVFTAGLQRWGMEPCGHSG*LSGSFP
Trigger: GGGGAAAGACCCAGAAAGTCACCCTGAATGTCCACA...TGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628511.2
CDS-3UTR TCA 90 bp TACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCAGAGCCATGCTCAGGATTGATGTAGTCATCTaGATCACTGTCCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: YRGLPRCARRPGGRAMLRIDVVI*ITVLHH
Trigger: ATGATGGAGGACAGTGATTCAGATGACTACATCAAT...CCTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp TGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGACATCAGCAGATAGATaGGACTCCTTGGCACCACAG +
Preference number: 4 (lower is better)
Translates to: WRQAGGRGSRIHSWSSEMTSADR*DSLAPQ
Trigger: CTGTGGTGCCAAGGAGTCTCATCTATCTGCTGATGT...CATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR TCA 90 bp CCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGCTTAGTCCATGGGGCTaGGGCATGTCACATAACTCA +
Preference number: 4 (lower is better)
Translates to: PMLLYPSQSLPQCGAVDGLSPWG*GMSHNS
Trigger: TGAGTTATGTGACATGCCTCAGCCCCATGGACTAAG...CCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp CAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATTGGCTGCTCTTCCCATaGTGGCTCGTATTCTCCACT +
Preference number: 4 (lower is better)
Translates to: QAGGRGSRIHSWSSEMGHWLLFP*WLVFST
Trigger: AGTGGAGAATACGAGCCATCATGGGAAGAGCAGCCA...ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGGTCAACTACAGGGGGCTaGCAAGGTGTGCAAGACGAC +
Preference number: 4 (lower is better)
Translates to: VGYHFHDISAIAEPWPPRSTTGG*QGVQDD
Trigger: GTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGA...CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp CACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGCAGGAAGTAAAGTaGCCAAAGCCAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: HCPPSWRQAGGRGSRIHSWQEVK*PKPEVH
Trigger: ATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCA...GCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp ATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCTGGGGCTCGTATTCACTGTaGACATTCAGGGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: IDETPWHHSPSLGLGDSWGSYSL*TFRVTF
Trigger: GAAAGTCACCCTGAATGTCCACAGTGAATACGAGCC...CCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp GGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGCTTGCCCCTTTGAGCTaGTGTGGTAACTCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: GRGSRIHSWSSEMGHGARLAPLS*CGNSGY
Trigger: GTAACCAGAGTTACCACACCAGCTCAAAGGGGCAAG...CCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp CGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCCTACTGAAGATGCTCTaGACACTCGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLGKEASGIGTIALHAYSLLKML*TLEGGG
Trigger: CCCACCGCCCTCGAGTGTCCAGAGCATCTTCAGTAG...GCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAACTACTGAAGATGCTCTaGACACTCGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GQLLYMPTAYLSTTGGCQLLKML*TLEGGG
Trigger: CCCACCGCCCTCGAGTGTCCAGAGCATCTTCAGTAG...TTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp CTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGGTCGGCGGGCCCGCCTaGAGAGGGCTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LRTHEAGIGHQQIDETPWVGGPA*RGLSSF
Trigger: AAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGAC...CCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp ATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACATTCAGAGATGGGGCATaGAGCCAGGGAGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: ITVLHHGGRLVVEAHVFTFRDGA*SQGDSD
Trigger: GTCTGAATCTCCCTGGCTCCATGCCCCATCTCTGAA...TGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp CAGCAGATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATTCACGTATTCACAGCTaGTCTTCAGAGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: QQIDETPWHHSPSLGLGDSRIHS*SSEMGH
Trigger: ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGA...ATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp GAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACACCACAGTCCGAGCCTaGGGTTGGGGGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EASGIGTIALHAYSLPVNTTVRA*GWGIAG
Trigger: CCCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGT...GTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp TACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCAGAGCCATGCTCAGGTACATTGTCTGGAACTaGCTAAGAAATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: YRGLPRCARRPGGRAMLRYIVWN*LRNGEH
Trigger: ATGTTCCCCATTTCTTAGCCAGTTCCAGACAATGTA...CCTGAGCATGGCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp TCAGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGCAGGGACAGAGCATTaGGGTGGGGGTAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: SEQEPSICVRPNPGKDARAGTEH*GGGKVH
Trigger: ATGCACCTTACCCCCACCCCAATGCTCTGTCCCTGC...TCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR CAA 72 bp TTTGAGGCTGTAGTGGATGGCAGGAAGGTTCGGGGCTaGTCACCTGCTACTGAAGATGCTCTGGACACTCGA +
Preference number: 4 (lower is better)
Translates to: FEAVVDGRKVRG*SPATEDALDTR
Trigger: TCGAGTGTCCAGAGCATCTTCAGTAGCAGGTGACAAGCCCCGAACCTTCCTGCCATCCACTACAGCCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR TCA 90 bp TCAGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGTCGGGATCAGGATGTaGAATCCTTGGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SEQEPSICVRPNPGKDARVGIRM*NPWPSL
Trigger: GAGGGAAGGCCAAGGATTTCACATCCTGATCCCGAC...TCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp AGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGAGTCGGGATCAGGATGTaGAATCCTTGGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RARAFYLCKTQPWEGCPRVGIRM*NPWPSL
Trigger: GAGGGAAGGCCAAGGATTTCACATCCTGATCCCGAC...TCTCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp CCCAGCCTGATGCCATGTGATCTAGAGCCTGGGCAGCAACAACCCTGTGGTCAAGGCTCTGAGAACACATaGAGCAGGTATTGGACATCA +
Preference number: 4 (lower is better)
Translates to: PSLMPCDLEPGQQQPCGQGSENT*SRYWTS
Trigger: TGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCC...TTGACCACAGGGTTGTTGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp CCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGGATGAATGCCCAGTaGGACTGTGTTGTACAGCTA +
Preference number: 4 (lower is better)
Translates to: PMLLYPSQSLPQCGAVDGWMNAQ*DCVVQL
Trigger: TAGCTGTACAACACAGTCTCACTGGGCATTCATCCA...CCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp ACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGGCTGCTCTTCCCATaGTGGCTCGTATTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TIALHAYSLPVNYRGLPRWLLFP*WLVFWQ
Trigger: CTGCCAGAATACGAGCCATCATGGGAAGAGCAGCCA...CCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442471.4
CDS-3UTR GCA 90 bp AGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGAGTCGGCCCTTGTATTCTaGCTTGATGAAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RGSRIHSWSSEMGHGARESALVF*LDEVGG
Trigger: ACCACCAACTTCATCAAGGCAGAATACAAGGGCCGA...CTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR GCA 90 bp CAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATTTCTTGCGTGGGTATTaGTTCAGAGTAACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: QAGGRGSRIHSWSSEMGHFLRGY*FRVTRP
Trigger: GGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAA...ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR GCA 90 bp GACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGTCAACTACAGGGGGCTaGCAAGGTGTGCAAGACGAC +
Preference number: 4 (lower is better)
Translates to: DNCSTCLQLTCQLQGAAKSTTGG*QGVQDD
Trigger: GTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGA...CTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp TGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGCAGATGAAACCATTTTaGAGTCTCAGGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: CPPSWRQAGGRGSRIHSWQMKPF*SLRHWL
Trigger: CAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTG...CCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp CAGATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCCGAATTTGGAAGAACTaGCATATGCAGGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: QIDETPWHHSPSLGLGDSRIWKN*HMQASG
Trigger: TCCAGATGCCTGCATATGCCAGTTCTTCCAAATTCG...GCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp CACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCCGAATTTGGAAGAACTaGCATATGCAGGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: HCPPSWRQAGGRGSRIHSRIWKN*HMQASG
Trigger: TCCAGATGCCTGCATATGCCAGTTCTTCCAAATTCG...GCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp GCCATAGTCCAGTGCTCTCTGCCTGTGCAGCCTGGTGTGGTGGTTGTAGCTGGGCTCTGGTTACGAATTTaGAAGAACTGGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: AIVQCSLPVQPGVVVVAGLWLRI*KNWHMQ
Trigger: CTGCATATGCCAGTTCTTCCAAATTCGTAACCAGAG...CCCAGCTACAACCACCACACCAGGCTGCACAGGCAGAGAGCACTGGACTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CCA 90 bp AGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGCTTGCCCCTTTGAGCTaGTGTGGTAACTCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: RLVVEAHVFTAGLQRWGMLAPLS*CGNSGY
Trigger: GTAACCAGAGTTACCACACCAGCTCAAAGGGGCAAG...CATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp TGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCGGAAAAGGCCCAGGATaGTCGGGATCAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: WDNCSTCLQLTCQLQGAAGKGPG*SGSGCE
Trigger: TTCACATCCTGATCCCGACCATCCTGGGCCTTTTCC...GGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp ATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTCACTGTCCTCCATCATaGCGGCAGGCTGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IPQSVRRLGKEASGIGTIHCPPS*RQAGGR
Trigger: TCTACCACCAGCCTGCCGCCATGATGGAGGACAGTG...AATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp TCAGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAAGTCGAGATGGGGCATaGGAAGTGATGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SEQEPSICVRPNPGKDARSRDGA*EVMRAL
Trigger: CAGAGCCCTCATCACTTCCCATGCCCCATCTCGACT...TCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp CTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGAGTCGAGATGGGGCATaGGAAGTGATGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LCKSHSLFDGLERKQVALSRDGA*EVMRAL
Trigger: CAGAGCCCTCATCACTTCCCATGCCCCATCTCGACT...CAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp CTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGATGGGAGTCGAGATaGGGCATGGGAAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: LCKSHSLFDGLERKQVALGWESR*GMGSDE
Trigger: CTCATCACTTCCCATGCCCCATCTCGACTCCCATCC...CAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAACAGGGCACAGATAGATaGGGATGGGAGTCGAGATGG +
Preference number: 4 (lower is better)
Translates to: GQLLYMPTAYLSTTGGCQQGTDR*GWESRW
Trigger: CCATCTCGACTCCCATCCCCATCTATCTGTGCCCTG...TTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp GAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGGGACCTTGCCCCTTTaGGCTGGTGTGGTAACTCTG +
Preference number: 4 (lower is better)
Translates to: EETLCKSHSLFDGLERKQGTLPL*AGVVTL
Trigger: CAGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCC...TTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp TACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGTCAGGCAGGAACATTaGTGTAGTCATCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: YSLPVNYRGLPRCARRPGVRQEH*CSHLNH
Trigger: GTGATTCAGATGACTACATCAATGTTCCTGCCTGAC...CCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp AGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGCAGCCTGATGCCATGTaGTCTAGAGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RHGRNTLQIPQSVRRLGKQPDAM*SRAWAA
Trigger: TGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTG...CTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp CAGATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCAGATATATCCTCACATaGATTTCAGGAAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QIDETPWHHSPSLGLGDSRYILT*ISGSGH
Trigger: GTGCCCACTTCCTGAAATGCATGTGAGGATATATCT...GCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000463473.2
CDS-3UTR GCA 90 bp CCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTAGATATATCCTCACATaGATTTCAGGAAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PPSWRQAGGRGSRIHSWSRYILT*ISGSGH
Trigger: GTGCCCACTTCCTGAAATGCATGTGAGGATATATCT...AGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR GCA 90 bp ACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCGTCTCAGGCATTGGCTaGTCTTCCCATGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: TARKGLLPNSKAVHLASSVSGIG*SSHDGS
Trigger: CGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGAC...GCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp CTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGAGTGCTCTCTGCCTGTaGAGCCTGGTGTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LWSKTWKKHSANPTVCSTSALCL*SLVWWL
Trigger: CAACCACCACACCAGGCTGCACAGGCAGAGAGCACT...CGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp AACAACCCTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGCACCAGCCCCAGAAGTaGCAGCAGGAAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: NNPVVKDMEETLCKSHSLHQPQK*QQEKAQ
Trigger: CTGGGCCTTTTCCTGCTGGCACTTCTGGGGCTGGTG...CAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAGGGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp ATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCTGGGACAATTGCTCTACATaGCTACAGCTTACCTGTCAA +
Preference number: 4 (lower is better)
Translates to: IDETPWHHSPSLGLGDSWDNCST*LQLTCQ
Trigger: TTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTC...CCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp ACATTTGGATCAGGGCAAAGGCGTTTCCAGGAGTGTTTTTATACCAGACCCCTGACCCCTCACAATCCTTaGCACAGTGTGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TFGSGQRRFQECFYTRPLTPHNP*HSVGQW
Trigger: CCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGT...CAGGGGTCTGGTATAAAAACACTCCTGGAAACGCCTTTGCCCTGATCCAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp GTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGCTCGTATTCACTGTaGACATTCAGGGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: VVEAHVFTAGLQRWGMEPGSYSL*TFRVTF
Trigger: GAAAGTCACCCTGAATGTCCACAGTGAATACGAGCC...TGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628511.2
CDS-3UTR CCA 90 bp CTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGCTTGCCCCTTTGAGCTaGTGTGGTAACTCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: LQIPQSVRRLGKEASGIGLAPLS*CGNSGY
Trigger: GTAACCAGAGTTACCACACCAGCTCAAAGGGGCAAG...CCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAATCTGCCTGTGCAGCCTaGTGTGGTGGTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: EETLCKSHSLFDGLERKQSACAA*CGGCSW
Trigger: CCAGCTACAACCACCACACCAGGCTGCACAGGCAGA...TTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp AGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGAGGAAAAGGCCCAGGATaGTCGGGATCAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: RARAFYLCKTQPWEGCPRGKGPG*SGSGCE
Trigger: TTCACATCCTGATCCCGACCATCCTGGGCCTTTTCC...TCTCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp TGTAGTCATCTGAATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTaGTCTTCAGAGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: CSHLNHCPPSWRQAGGRGSRIHS*SSEMGH
Trigger: ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGA...GCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGATTCAGATGACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp CCTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGGTTGGGGGATAGCTaGGGAGTTGTCAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PVVKDMEETLCKSHSLFDGLGDS*GVVRQE
Trigger: TTCCTGCCTGACAACTCCCCAGCTATCCCCCAACCC...GTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp TCAGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAACAGATAGATGGGGATaGGAGTCGAGATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SEQEPSICVRPNPGKDARTDRWG*ESRWGM
Trigger: CATGCCCCATCTCGACTCCCATCCCCATCTATCTGT...TCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp TGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGATTGATGTAGTCATCTaGATCACTGTCCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: CPPSWRQAGGRGSRIHSWIDVVI*ITVLHH
Trigger: ATGATGGAGGACAGTGATTCAGATGACTACATCAAT...CCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR TCA 90 bp GAAGTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATACAGCCTGATGCCATGTaGTCTAGAGCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EVMRALRTHEAGIGHQQIQPDAM*SRAWAA
Trigger: TGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTG...TATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp ATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTAGGAACAGATTCTTaGGTGGGTATTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MPTAYLSTTGGCQGVQDDLGTDS*VGIASE
Trigger: CTCTGAAGCAATACCCACGCAAGAATCTGTTCCTAG...GTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp ATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACACTAGGAACAGATTCTTaGGTGGGTATTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ITVLHHGGRLVVEAHVFTLGTDS*VGIASE
Trigger: CTCTGAAGCAATACCCACGCAAGAATCTGTTCCTAG...TGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR GCA 90 bp AGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTAGTGCTCTCTGCCTGTaGAGCCTGGTGTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RALRTHEAGIGHQQIDETSALCL*SLVWWL
Trigger: CAACCACCACACCAGGCTGCACAGGCAGAGAGCACT...AGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR GCA 90 bp GACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGTTTATACCAGACCCCTaGTTAGTCCATGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DNCSTCLQLTCQLQGAAKFIPDP*LVHGAE
Trigger: CTCAGCCCCATGGACTAAGCAGGGGTCTGGTATAAA...CTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp CATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGCACCACAGTCCAGGAACTCCTGACTaGTTTCCTTCCCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: HEAGIGHQQIDETPWHHSPGTPD*FPSPAC
Trigger: GCAAGCAGGGGAAGGAAAGCAGTCAGGAGTTCCTGG...ACTGTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp AGAGCAAGAGCCTTCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGACTTGCCCCTTTGAGCTaGTGTGGTAACTCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: RARAFYLCKTQPWEGCPRLAPLS*CGNSGY
Trigger: GTAACCAGAGTTACCACACCAGCTCAAAGGGGCAAG...TCTCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp ATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGGGAGGAGTGGTGAACTaGAGGGACCTTGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: MRALRTHEAGIGHQQIDEGGVVN*RDLAPL
Trigger: CAAAGGGGCAAGGTCCCTCCAGTTCACCACTCCTCC...CTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGGAGGAGTGGTGAACTaGAGGGACCTTGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VMRALRTHEAGIGHQQIDGGVVN*RDLAPL
Trigger: CAAAGGGGCAAGGTCCCTCCAGTTCACCACTCCTCC...ATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp ATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTTTCAGAGATGGGGCATaGAGCCAGGGAGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: IPQSVRRLGKEASGIGTIFRDGA*SQGDSD
Trigger: GTCTGAATCTCCCTGGCTCCATGCCCCATCTCTGAA...AATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GAAGTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGGGTTGGGGGATAGCTaGGGAGTTGTCAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: EVMRALRTHEAGIGHQQIGLGDS*GVVRQE
Trigger: TTCCTGCCTGACAACTCCCCAGCTATCCCCCAACCC...TATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp CAGCAGATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATCTGTGGTCAAAGACATaGAAGAAACACTCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: QQIDETPWHHSPSLGLGDLWSKT*KKHSAN
Trigger: ATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAG...ATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp ATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCTGGCTGTGGTCAAAGACATaGAAGAAACACTCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: IDETPWHHSPSLGLGDSWLWSKT*KKHSAN
Trigger: ATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAG...CCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp CCCAGCCTGATGCCATGTGATCTAGAGCCTGGGCAGCAACAACCCTGTGGTCAAATTGATGTAGTCATCTaGATCACTGTCCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: PSLMPCDLEPGQQQPCGQIDVVI*ITVLHH
Trigger: ATGATGGAGGACAGTGATTCAGATGACTACATCAAT...TTGACCACAGGGTTGTTGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp GGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGCTCTGAGAACACATaGAGCAGGTATTGGACATCA +
Preference number: 4 (lower is better)
Translates to: GQLLYMPTAYLSTTGGCQGSENT*SRYWTS
Trigger: TGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCC...TTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp ACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAGCCTCAAGCTCTGGCTaGACTTTGTGGTCGACATCA +
Preference number: 4 (lower is better)
Translates to: TWKKHSANPTVCSTAWKGASSSG*TLWSTS
Trigger: TGATGTCGACCACAAAGTTCAGCCAGAGCTTGAGGC...TCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp ACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAGGGATGGAGACACGCTaGTTACTCAGGAACCCTTCA +
Preference number: 4 (lower is better)
Translates to: TWKKHSANPTVCSTAWKGGMETR*LLRNPS
Trigger: TGAAGGGTTCCTGAGTAAGCAGCGTGTCTCCATCCC...TCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp CAGAAGTGCCAGCAGGAAAAGGCCCAGGATGGTCGGGATCAGGATGTGAAATCCAGATATATCCTCACATaGATTTCAGGAAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QKCQQEKAQDGRDQDVKSRYILT*ISGSGH
Trigger: GTGCCCACTTCCTGAAATGCATGTGAGGATATATCT...GGATTTCACATCCTGATCCCGACCATCCTGGGCCTTTTCCTGCTGGCACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR GCA 90 bp GGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCATGGCATTGGGACAATTaGTCTACATGCCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: GTIALHAYSLPVNYRGLPWHWDN*STCLQL
Trigger: AAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCA...TGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCACTCTGGTTACGAATTTaGAAGAACTGGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: VVEAHVFTAGLQRWGMEPLWLRI*KNWHMQ
Trigger: CTGCATATGCCAGTTCTTCCAAATTCGTAACCAGAG...TGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CCA 90 bp ACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTCACGTATTCACAGCTaGTCTTCAGAGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: TIALHAYSLPVNYRGLPRSRIHS*SSEMGH
Trigger: ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGA...CCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp ACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAATAGATGAGACTCCTTaGCACCACAGTCCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TWKKHSANPTVCSTAWKGIDETP*HHSPSL
Trigger: CAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT...TCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp ACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGCACCACACAGATAGATGGGGATaGGAGTCGAGATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: THEAGIGHQQIDETPWHHTDRWG*ESRWGM
Trigger: CATGCCCCATCTCGACTCCCATCCCCATCTATCTGT...GTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR GCA 90 bp GTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGGGATGGAGACACGCTaGTTACTCAGGAACCCTTCA +
Preference number: 4 (lower is better)
Translates to: VMRALRTHEAGIGHQQIDGMETR*LLRNPS
Trigger: TGAAGGGTTCCTGAGTAAGCAGCGTGTCTCCATCCC...ATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR GCA 90 bp ATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTTCGGCCCTTGTATTCTaGCTTGATGAAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: IPQSVRRLGKEASGIGTISALVF*LDEVGG
Trigger: ACCACCAACTTCATCAAGGCAGAATACAAGGGCCGA...AATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp ACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGATTCTTGCGTGGGTATTaGTTCAGAGTAACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: TWKKHSANPTVCSTAWKGFLRGY*FRVTRP
Trigger: GGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAA...TCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp ACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGCACCACTTCTTGCGTGGGTATTaGTTCAGAGTAACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: THEAGIGHQQIDETPWHHFLRGY*FRVTRP
Trigger: GGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAA...GTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000463473.2
CDS-3UTR CCA 90 bp TCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGACAATAGCTATGCCTGGCAGGAAGTAAAGTaGCCAAAGCCAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: SICVRPNPGKDARDNSYAWQEVK*PKPEVH
Trigger: ATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCA...GGCATAGCTATTGTCTCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp ATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGTTCAGGGTGACTTTCTaGGTCTTTCCCCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: MRALRTHEAGIGHQQIDEFRVTF*VFPRSV
Trigger: CACAGACCGGGGAAAGACCCAGAAAGTCACCCTGAA...CTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp CTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGCAGATGAAACCATTTTaGAGTCTCAGGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCKSHSLFDGLERKQVALQMKPF*SLRHWL
Trigger: CAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTG...CAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp CGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCCAGATGAAACCATTTTaGAGTCTCAGGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLGKEASGIGTIALHAYSQMKPF*SLRHWL
Trigger: CAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTG...GCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GAAGTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATATTCAGAGATGGGGCATaGAGCCAGGGAGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: EVMRALRTHEAGIGHQQIFRDGA*SQGDSD
Trigger: GTCTGAATCTCCCTGGCTCCATGCCCCATCTCTGAA...TATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp TCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGGTCTGTTCGACGGCTTaGAAAGGAAGCAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SKTWKKHSANPTVCSTAWVCSTA*KGSKWH
Trigger: ATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGAC...CCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp CTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGGCAAGTGCTAACATTTaGATCAGGGCAAAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: LCKSHSLFDGLERKQVALASANI*IRAKAF
Trigger: AAACGCCTTTGCCCTGATCCAAATGTTAGCACTTGC...CAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp GCTTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTGCTTGAACTGGCTAAGAAATaGGGAACATTTGTGAAAACC +
Preference number: 4 (lower is better)
Translates to: ASLPLTILATVWGSGWVLELAKK*GTFVKT
Trigger: GGTTTTCACAAATGTTCCCCATTTCTTAGCCAGTTC...AAGCACCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367091.8
3UTR CAA 72 bp GACGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATaGCTCTACATGCCTACAGCTTACCTGTCAACTACA +
Preference number: 4 (lower is better)
Translates to: DGLERKQVALGQ*LYMPTAYLSTT
Trigger: TGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp CTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGCTTATGTGCATCAAGTaGTGGAGACAGAGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LCKSHSLFDGLERKQVALLMCIK*WRQSKE
Trigger: CTCTTTACTCTGTCTCCATCACTTGATGCACATAAG...CAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp ACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAATCACACTGTCTTCTaGTATCTGCAGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: TWKKHSANPTVCSTAWKGNHTVF*YLQGQS
Trigger: GCTCTGTCCCTGCAGATATCAGAAGACAGTGTGATT...TCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp AGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTTTGTCCCTTCTAGAGTaGAAGGTCCATCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RALRTHEAGIGHQQIDETLSLLE*KVHPRA
Trigger: GGCTCTTGGATGGACCTTGCACTCTAGAAGGGACAA...AGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR GCA 90 bp TCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGCTGCTTTCCTTCCCCTaGTTGCTATACATTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SKTWKKHSANPTVCSTAWLLSFP*LLYIVW
Trigger: CCAGACAATGTATAGCAAGCAGGGGAAGGAAAGCAG...CCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp ACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGCACCACTGGCAGGAAGTAAAGTaGCCAAAGCCAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: THEAGIGHQQIDETPWHHWQEVK*PKPEVH
Trigger: ATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCA...GTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp TGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAGTCGGCGGGCCCGCCTaGAGAGGGCTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CTIQSVMTFPANKRQHNSVGGPA*RGLSSF
Trigger: AAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGAC...TGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp AGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGGAAGCAAGTGGCATTaGGACAATTGCTCTACATGC +
Preference number: 4 (lower is better)
Translates to: RHGRNTLQIPQSVRRLGKGSKWH*DNCSTC
Trigger: GCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCC...CTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp AACAACCCTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGGTCTGTTCGACGGCTTaGAAAGGAAGCAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NNPVVKDMEETLCKSHSLVCSTA*KGSKWH
Trigger: ATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGAC...CAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAGGGTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGTATATGTAGGAGGTaGGATATCACTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: GTIALHAYSLPVNYRGLPSICRR*DITSMT
Trigger: TGTCATGGAAGTGATATCCCACCTCCTACATATACT...TGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp GAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACGTCAGGCAGGAACATTaGTGTAGTCATCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: EASGIGTIALHAYSLPVNVRQEH*CSHLNH
Trigger: GTGATTCAGATGACTACATCAATGTTCCTGCCTGAC...GTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR TCA 90 bp ACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGCACCACGTCAGGCAGGAACATTaGTGTAGTCATCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: THEAGIGHQQIDETPWHHVRQEH*CSHLNH
Trigger: GTGATTCAGATGACTACATCAATGTTCCTGCCTGAC...GTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR TCA 90 bp GTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGGCTCTGAGAACACATaGAGCAGGTATTGGACATCA +
Preference number: 4 (lower is better)
Translates to: VMRALRTHEAGIGHQQIDGSENT*SRYWTS
Trigger: TGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCC...ATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR GCA 90 bp ACAGCTAGAAAAGGCCTTCTTCCCAATAGCAAGGCTGTGCATCTAGCCTCAAGCGACAATTGCTCTACATaGCTACAGCTTACCTGTCAA +
Preference number: 4 (lower is better)
Translates to: TARKGLLPNSKAVHLASSDNCST*LQLTCQ
Trigger: TTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTC...GCTTGAGGCTAGATGCACAGCCTTGCTATTGGGAAGAAGGCCTTTTCTAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp AGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTTGGCAGGAAGTAAAGTaGCCAAAGCCAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: RALRTHEAGIGHQQIDETWQEVK*PKPEVH
Trigger: ATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCA...AGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CCA 90 bp AACAACCCTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGGGAAGCAAGTGGCATTaGGACAATTGCTCTACATGC +
Preference number: 4 (lower is better)
Translates to: NNPVVKDMEETLCKSHSLGSKWH*DNCSTC
Trigger: GCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCC...CAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAGGGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
3UTR CAA 72 bp TCTTCCCTAATCTTCCACTTGAGTGTCAAGCTGACCTaGCTGATGGTGACATTGCACCTGGATGTACTATCC +
Preference number: 4 (lower is better)
Translates to: SSLIFHLSVKLT*LMVTLHLDVLS
Trigger: GGATAGTACATCCAGGTGCAATGTCACCATCAGCAAGGTCAGCTTGACACTCAAGTGGAAGATTAGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp GAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGGGATATCACTTCCATaGCATAAGTGCTATTGCAGA +
Preference number: 4 (lower is better)
Translates to: EETLCKSHSLFDGLERKQGISLP*HKCYCR
Trigger: TCTGCAATAGCACTTATGTCATGGAAGTGATATCCC...TTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp ACATTTGGATCAGGGCAAAGGCGTTTCCAGGAGTGTTTTTATACCAGACCCCTGTTTCCTTCCCCTGCTTaGTATACATTGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TFGSGQRRFQECFYTRPLFPSPA*YTLSGT
Trigger: AGTTCCAGACAATGTATAGCAAGCAGGGGAAGGAAA...CAGGGGTCTGGTATAAAAACACTCCTGGAAACGCCTTTGCCCTGATCCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp CTTGGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCTTACGAATTTGGAAGAACTaGCATATGCAGGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: LGKEASGIGTIALHAYSLRIWKN*HMQASG
Trigger: TCCAGATGCCTGCATATGCCAGTTCTTCCAAATTCG...TAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp GAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAACTCTGGTTACGAATTTaGAAGAACTGGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: EETLCKSHSLFDGLERKQLWLRI*KNWHMQ
Trigger: CTGCATATGCCAGTTCTTCCAAATTCGTAACCAGAG...TTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp CTTGGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCTTACTCTGGTTACGAATTTaGAAGAACTGGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: LGKEASGIGTIALHAYSLLWLRI*KNWHMQ
Trigger: CTGCATATGCCAGTTCTTCCAAATTCGTAACCAGAG...TAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CCA 90 bp TGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAGCTGGTCTTCAGAGATaGGGCATGGAGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CTIQSVMTFPANKRQHNSAGLQR*GMEPGR
Trigger: TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGC...TGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp ATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTACACTGTCCTCCATCATaGCGGCAGGCTGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IQCLTITLFQKPRQRVYVHCPPS*RQAGGR
Trigger: TCTACCACCAGCCTGCCGCCATGATGGAGGACAGTG...TACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp GTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGTTGCTATACATTGTCTaGAACTGGCTAAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: VKDMEETLCKSHSLFDGLLLYIV*NWLRNG
Trigger: CCCATTTCTTAGCCAGTTCCAGACAATGTATAGCAA...CAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp ATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTACTCTACCTTTACTTCTaGGAGGATCCTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: IQCLTITLFQKPRQRVYVLYLYF*EDPQGP
Trigger: GGGGCCCTGAGGATCCTCCCAGAAGTAAAGGTAGAG...TACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CCA 90 bp ATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGGTAAACGATAAAATGTaGATTAAAGTGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: MRALRTHEAGIGHQQIDEVNDKM*IKVPST
Trigger: TGTGCTGGGCACTTTAATCCACATTTTATCGTTTAC...CTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR TCA 90 bp ATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTAACATCAGCAGATAGATaGGACTCCTTGGCACCACAG +
Preference number: 4 (lower is better)
Translates to: IQCLTITLFQKPRQRVYVTSADR*DSLAPQ
Trigger: CTGTGGTGCCAAGGAGTCTCATCTATCTGCTGATGT...TACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp ATACAGTGTCTGACTATAACCTTGTTCCAAAAACCTAGGCAAAGAGTATATGTATTGTCCCTTCTAGAGTaGAAGGTCCATCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: IQCLTITLFQKPRQRVYVLSLLE*KVHPRA
Trigger: GGCTCTTGGATGGACCTTGCACTCTAGAAGGGACAA...TACATATACTCTTTGCCTAGGTTTTTGGAACAAGGTTATAGTCAGACACTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR GCA 90 bp TGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAAAATGTGGATTAAAGTaGCCAGCACAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: CTIQSVMTFPANKRQHNSKCGLK*PAQSRS
Trigger: GGATCTGCTTTGTGCTGGGCACTTTAATCCACATTT...TGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS CCA 90 bp AGCTCTCCAGGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTaGAGAGGGCTTCCCCACAAAGCCACGGGAAGAGGGAGGAAAATG +
Preference number: 5 (lower is better)
Translates to: SSPGRASSRPVGGPA*RGLPHKATGRGRKM
Trigger: CATTTTCCTCCCTCTTCCCGTGGCTTTGTGGGGAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCCTGGAGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474041.5
CDS-3UTR CAA 90 bp TCTGGGAGCTCTCCAGGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTGGACTAGGAACAGATTCTaGCGTGGGTATTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SGSSPGRASSRPVGGPAWTRNRF*RGYCFR
Trigger: TCTGAAGCAATACCCACGCAAGAATCTGTTCCTAGT...CCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCCTGGAGAGCTCCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CAA 90 bp CCTGCTACTGAAGATGCTCTGGACACTCGAGGGCGGTGGGTGATTTGGGTGGTGCTGGGCGTCTGGGGCTaGAGCAGCCCCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: PATEDALDTRGRWVIWVVLGVWG*SSPSRA
Trigger: AGCTCTGGAGGGGCTGCTCAAGCCCCAGACGCCCAG...CACCACCCAAATCACCCACCGCCCTCGAGTGTCCAGAGCATCTTCAGTAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CAA 90 bp TCACGGCCAGTCGGCGGGCCCGCCTGGAGAGGGCTTTCCTCCTTTCAACGGCCCATTCTTGCGTGGGTATaGCTTCAGAGTAACTCGGCC +
Preference number: 5 (lower is better)
Translates to: SRPVGGPAWRGLSSFQRPILAWV*LQSNSA
Trigger: GGCCGAGTTACTCTGAAGCAATACCCACGCAAGAAT...GGGCCGTTGAAAGGAGGAAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CAA 90 bp CAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATCTGGGCGTCTGGGGCTaGAGCAGCCCCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QAGGRGSRIHSWSSEMGHLGVWG*SSPSRA
Trigger: AGCTCTGGAGGGGCTGCTCAAGCCCCAGACGCCCAG...ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp CCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTGCTGTAGATGTTGTTTaGGGAGCGCGGTCGCGGCGA +
Preference number: 5 (lower is better)
Translates to: PPSWRQAGGRGSRIHSWSAVDVV*GARSRR
Trigger: TCGCCGCGACCGCGCTCCCAAAACAACATCTACAGC...AGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS TCA 90 bp GAGCCTCCAATCAGCGGAGGAACCTACCACTGTGGACATTCAGGGTaGCTTTCTGGGTCTTTCCCCGGTCTGTGTTCATGCCCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: EPPISGGTYHCGHSG*LSGSFPGLCSCPLR
Trigger: GCGGAGCGGGCATGAACACAGACCGGGGAAAGACCCAGAAAGTCACCCTGAATGTCCACAGTGGTAGGTTCCTCCGCTGATTGGAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533312.1
CDS-3UTR CAA 90 bp AAGGCCCAGGATGGTCGGGATCAGGATGTGAAATCCTTGGCCTTCCCTCCCAGAGCTGTAGATGTTGTTTaGGGAGCGCGGTCGCGGCGA +
Preference number: 5 (lower is better)
Translates to: KAQDGRDQDVKSLAFPPRAVDVV*GARSRR
Trigger: TCGCCGCGACCGCGCTCCCAAAACAACATCTACAGC...TCTGGGAGGGAAGGCCAAGGATTTCACATCCTGATCCCGACCATCCTGGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CAA 90 bp AGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATG +
Preference number: 5 (lower is better)
Translates to: SLPVNYRGLPRCARRPGGLESQA*AALPMM
Trigger: CATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAA...GCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp CAGATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCAGGGACCTTGCCCCTTaGAGCTGGTGTGGTAACTCT +
Preference number: 5 (lower is better)
Translates to: QIDETPWHHSPSLGLGDSRDLAP*SWCGNS
Trigger: AGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCCT...GCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CAA 90 bp CCTGGGGGCAGAGCCATGCTCAGGGCACAGATAGATGGGGATGGGAGTCGAGATAGGAAGGTTCGGGGCTaGTCACCTGCTACTGAAGAT +
Preference number: 5 (lower is better)
Translates to: PGGRAMLRAQIDGDGSRDRKVRG*SPATED
Trigger: ATCTTCAGTAGCAGGTGACAAGCCCCGAACCTTCCT...ATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCATGGCTCTGCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp ATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCTGGCAGGATGTGAAATCCTaGGCCTTCCCTCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: IDETPWHHSPSLGLGDSWQDVKS*AFPPRL
Trigger: CAGTCTGGGAGGGAAGGCCAAGGATTTCACATCCTG...CCAGCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CAA 90 bp ACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGGCAGAGCAGAGTAACTCGGCCCTaGTATTCTGCCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: TCQLQGAAKVCKTTWGQSRVTRP*YSALMK
Trigger: CTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCT...GCTCTGCCCCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CAA 90 bp TCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGCTGGGCGTCTGGGGCTaGAGCAGCCCCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SKTWKKHSANPTVCSTAWLGVWG*SSPSRA
Trigger: AGCTCTGGAGGGGCTGCTCAAGCCCCAGACGCCCAG...CCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp GAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAACTGGGCGTCTGGGGCTaGAGCAGCCCCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: EETLCKSHSLFDGLERKQLGVWG*SSPSRA
Trigger: AGCTCTGGAGGGGCTGCTCAAGCCCCAGACGCCCAG...TTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp CCCAGCCTGATGCCATGTGATCTAGAGCCTGGGCAGCAACAACCCTGTGGTCAACAGGATGTGAAATCCTaGGCCTTCCCTCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: PSLMPCDLEPGQQQPCGQQDVKS*AFPPRL
Trigger: CAGTCTGGGAGGGAAGGCCAAGGATTTCACATCCTG...TTGACCACAGGGTTGTTGCTGCCCAGGCTCTAGATCACATGGCATCAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGGGCTGTAGATGTTGTTTaGGGAGCGCGGTCGCGGCGA +
Preference number: 5 (lower is better)
Translates to: VGYHFHDISAIAEPWPPRAVDVV*GARSRR
Trigger: TCGCCGCGACCGCGCTCCCAAAACAACATCTACAGC...CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS GCA 90 bp GCAAGGTCCATCCAAGAGCCCCTAGAGAGGGGGATGGAGACACGCTaGTTACTCAGGAACCCTTCACAATCTGGAAACTGTTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ARSIQEPLERGMETR*LLRNPSQSGNCFWG
Trigger: CCCCCAGAAACAGTTTCCAGATTGTGAAGGGTTCCTGAGTAAGCAGCGTGTCTCCATCCCCCTCTCTAGGGGCTCTTGGATGGACCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525793.5
CDS-3UTR CAA 90 bp CCTGGGGGCAGAGCCATGCTCAGGGCACAGATAGATGGGGATGGGAGTCGAGATAAAGCCAGAAGTCCATaGTCCCTTCTAGAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: PGGRAMLRAQIDGDGSRDKARSP*SLLECK
Trigger: CTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTT...ATCTCGACTCCCATCCCCATCTATCTGTGCCCTGAGCATGGCTCTGCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp CAGAAGTGCCAGCAGGAAAAGGCCCAGGATGGTCGGGATCAGGATGTGAAATCCTCAGGAAGTGGGCACTaGATGGTAACTGATCCGCCC +
Preference number: 5 (lower is better)
Translates to: QKCQQEKAQDGRDQDVKSSGSGH*MVTDPP
Trigger: GGGCGGATCAGTTACCATCAAGTGCCCACTTCCTGA...GGATTTCACATCCTGATCCCGACCATCCTGGGCCTTTTCCTGCTGGCACTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CAA 90 bp ACTGAAGATGCTCTGGACACTCGAGGGCGGTGGGTGATTTGGGTGGTGGGGGAGAGAGTAACTCGGCCCTaGTATTCTGCCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: TEDALDTRGRWVIWVVGERVTRP*YSALMK
Trigger: CTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCT...CTCCCCCACCACCCAAATCACCCACCGCCCTCGAGTGTCCAGAGCATCTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CAA 90 bp AGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGAGGGACCTTGCCCCTTaGAGCTGGTGTGGTAACTCT +
Preference number: 5 (lower is better)
Translates to: RLVVEAHVFTAGLQRWGMRDLAP*SWCGNS
Trigger: AGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCCT...CATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp TGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGAGGAAGGTTCGGGGCTaGTCACCTGCTACTGAAGAT +
Preference number: 5 (lower is better)
Translates to: WRQAGGRGSRIHSWSSEMRKVRG*SPATED
Trigger: ATCTTCAGTAGCAGGTGACAAGCCCCGAACCTTCCT...CATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTGCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp GGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGAGGAAGGTTCGGGGCTaGTCACCTGCTACTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GRGSRIHSWSSEMGHGARRKVRG*SPATED
Trigger: ATCTTCAGTAGCAGGTGACAAGCCCCGAACCTTCCT...CCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS GCA 90 bp GGAAGTAAAGTGGCCAAAGCCAGAAGTCCATTGTCCCTTCTAGAGTaGAAGGTCCATCCAAGAGCCCCTAGAGAGGGGGATGGAGACACG +
Preference number: 5 (lower is better)
Translates to: GSKVAKARSPLSLLE*KVHPRAPREGDGDT
Trigger: CGTGTCTCCATCCCCCTCTCTAGGGGCTCTTGGATGGACCTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTTGGCCACTTTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
ENST00000525793.5
ENST00000528654.1
ENST00000530505.1
ENST00000533312.1
CDS CCA 90 bp AGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATaGGGCATGGAGCCAGGGAGATTCAGACACCTGGCAGGAAGTAAA +
Preference number: 5 (lower is better)
Translates to: RLVVEAHVFTAGLQR*GMEPGRFRHLAGSK
Trigger: TTTACTTCCTGCCAGGTGTCTGAATCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528654.1
CDS-3UTR CAA 90 bp GGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCATCAGGAAGTGGGCACTaGATGGTAACTGATCCGCCC +
Preference number: 5 (lower is better)
Translates to: GTIALHAYSLPVNYRGLPSGSGH*MVTDPP
Trigger: GGGCGGATCAGTTACCATCAAGTGCCCACTTCCTGA...TGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CAA 90 bp GAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGAGATCTGCCTTGATGAAGTaGGTGGTGGATACCACGGTA +
Preference number: 5 (lower is better)
Translates to: EAHVFTAGLQRWGMEPGRSALMK*VVDTTV
Trigger: TACCGTGGTATCCACCACCAACTTCATCAAGGCAGA...TCTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp AGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGGAGTCTGCCTTGATGAAGTaGGTGGTGGATACCACGGTA +
Preference number: 5 (lower is better)
Translates to: RGSRIHSWSSEMGHGARESALMK*VVDTTV
Trigger: TACCGTGGTATCCACCACCAACTTCATCAAGGCAGA...CTCCCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp AGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATG +
Preference number: 5 (lower is better)
Translates to: RLVVEAHVFTAGLQRWGMLESQA*AALPMM
Trigger: CATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAA...CATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp CAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATG +
Preference number: 5 (lower is better)
Translates to: QAGGRGSRIHSWSSEMGHLESQA*AALPMM
Trigger: CATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAA...ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp TGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAGGGACCTTGCCCCTTaGAGCTGGTGTGGTAACTCT +
Preference number: 5 (lower is better)
Translates to: WDNCSTCLQLTCQLQGAARDLAP*SWCGNS
Trigger: AGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCCT...GGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp GGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGGACCTTGCCCCTTaGAGCTGGTGTGGTAACTCT +
Preference number: 5 (lower is better)
Translates to: GTIALHAYSLPVNYRGLPRDLAP*SWCGNS
Trigger: AGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCCT...TGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp TACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGGTGTGCAAGACGACCTGGGGCAAGAGCCTTCTATTaGTGTAAGACCCAACCCTGG +
Preference number: 5 (lower is better)
Translates to: YSLPVNYRGLPRCARRPGARAFY*CKTQPW
Trigger: CCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGC...CCCAGGTCGTCTTGCACACCTTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp GGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAGGAGAGTAACTCGGCCCTaGTATTCTGCCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: GRGSRIHSWSSEMGHGARRVTRP*YSALMK
Trigger: CTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCT...CCTGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp GTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGGAGCCAATTCTTGCGTGGGTATaGCTTCAGAGTAACTCGGCC +
Preference number: 5 (lower is better)
Translates to: VVEAHVFTAGLQRWGMEPILAWV*LQSNSA
Trigger: GGCCGAGTTACTCTGAAGCAATACCCACGCAAGAAT...TGGCTCCATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp TCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGGCTGTAGATGTTGTTTaGGGAGCGCGGTCGCGGCGA +
Preference number: 5 (lower is better)
Translates to: SKTWKKHSANPTVCSTAWAVDVV*GARSRR
Trigger: TCGCCGCGACCGCGCTCCCAAAACAACATCTACAGC...CCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp CCCATGCTTCTTTACCCCTCACAATCCTTGCCACAGTGTGGGGCAGTGGATGGGTTGCTGATGGTGACATaGCACCTGGATGTACTATCC +
Preference number: 5 (lower is better)
Translates to: PMLLYPSQSLPQCGAVDGLLMVT*HLDVLS
Trigger: GGATAGTACATCCAGGTGCAATGTCACCATCAGCAA...CCCATCCACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTAAAGAAGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS GCA 90 bp CATGTTCCAGATCCAGCCATCTCCCGGCACAGATATATCCTCACATaGATTTCAGGAAGTGGGCACTTGATGGTAACTGATCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: HVPDPAISRHRYILT*ISGSGHLMVTDPPS
Trigger: GCTGGGCGGATCAGTTACCATCAAGTGCCCACTTCCTGAAATGCATGTGAGGATATATCTGTGCCGGGAGATGGCTGGATCTGGAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS-3UTR CAA 90 bp CTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAGTGGCATTGTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATG +
Preference number: 5 (lower is better)
Translates to: LCKSHSLFDGLERKQVALLESQA*AALPMM
Trigger: CATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAA...CAATGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp CAGATAGATGAGACTCCTTGGCACCACAGTCCGAGCCTGGGGTTGGGGGATAGCACTCTGGTTACGAATTaGGAAGAACTGGCATATGCA +
Preference number: 5 (lower is better)
Translates to: QIDETPWHHSPSLGLGDSTLVTN*EELAYA
Trigger: TGCATATGCCAGTTCTTCCAAATTCGTAACCAGAGT...GCTATCCCCCAACCCCAGGCTCGGACTGTGGTGCCAAGGAGTCTCATCTATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CAA 90 bp CGGCTTGGAAAGGAAGCAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCAGTCTGTTCGACGGCTaGGAAAGGAAGCAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RLGKEASGIGTIALHAYSSLFDG*ERKQVA
Trigger: TGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACT...GCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCTTTCCAAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp GAGATTTTTGAGGCTGTAGTGGATGGCAGGAAGGTTCGGGGCTTGTCACCTGCTAAAGCCAGAAGTCCATaGTCCCTTCTAGAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: EIFEAVVDGRKVRGLSPAKARSP*SLLECK
Trigger: CTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTT...AGCAGGTGACAAGCCCCGAACCTTCCTGCCATCCACTACAGCCTCAAAAATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS-3UTR CAA 90 bp CAGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATACTAGGAACAGATTCTaGCGTGGGTATTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: QAGGRGSRIHSWSSEMGHTRNRF*RGYCFR
Trigger: TCTGAAGCAATACCCACGCAAGAATCTGTTCCTAGT...ATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp CATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGCACCACAGTCAGGATGTGAAATCCTaGGCCTTCCCTCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: HEAGIGHQQIDETPWHHSQDVKS*AFPPRL
Trigger: CAGTCTGGGAGGGAAGGCCAAGGATTTCACATCCTG...ACTGTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CAA 90 bp GGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAAGTGGCATTGGGACAATaGCTCTACATGCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: GQLLYMPTAYLSTTGGCQVALGQ*LYMPTA
Trigger: AGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCAC...TTGGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp TGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAGGGGGCTGCCAGGAAGCAAGTGGCATaGGGACAATTGCTCTACATG +
Preference number: 5 (lower is better)
Translates to: WDNCSTCLQLTCQLQGAARKQVA*GQLLYM
Trigger: CATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCT...GGCAGCCCCCTGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp GTGGGATATCACTTCCATGACATAAGTGCTATTGCAGAGCCGTGGCCACCCAGGTCCCTAATCTTCCACTaGAGTGTCAAGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: VGYHFHDISAIAEPWPPRSLIFH*SVKLTL
Trigger: CAAGGTCAGCTTGACACTCAAGTGGAAGATTAGGGA...CCTGGGTGGCCACGGCTCTGCAATAGCACTTATGTCATGGAAGTGATATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CAA 90 bp AGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTTACCCCTCACAATCCTaGCCACAGTGTGGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RALRTHEAGIGHQQIDETYPSQS*PQCGAV
Trigger: CACTGCCCCACACTGTGGCAAGGATTGTGAGGGGTA...AGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS TCA 90 bp ATATATCCTCACATGCATTTCAGGAAGTGGGCACTTGATGGTAACTaGTCCGCCCAGCTCCCCCTCTACCTTTACTTCTGGGAGGATCCT +
Preference number: 5 (lower is better)
Translates to: IYPHMHFRKWALDGN*SAQLPLYLYFWEDP
Trigger: AGGATCCTCCCAGAAGTAAAGGTAGAGGGGGAGCTGGGCGGATCAGTTACCATCAAGTGCCCACTTCCTGAAATGCATGTGAGGATATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS-3UTR CAA 90 bp CTGAATCACTGTCCTCCATCATGGCGGCAGGCTGGTGGTAGAGGCTCACGTATTACTCTGGTTACGAATTaGGAAGAACTGGCATATGCA +
Preference number: 5 (lower is better)
Translates to: LNHCPPSWRQAGGRGSRITLVTN*EELAYA
Trigger: TGCATATGCCAGTTCTTCCAAATTCGTAACCAGAGT...AATACGTGAGCCTCTACCACCAGCCTGCCGCCATGATGGAGGACAGTGATTCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp AGGCTGGTGGTAGAGGCTCACGTATTCACAGCTGGTCTTCAGAGATGGGGCATGACTCTGGTTACGAATTaGGAAGAACTGGCATATGCA +
Preference number: 5 (lower is better)
Translates to: RLVVEAHVFTAGLQRWGMTLVTN*EELAYA
Trigger: TGCATATGCCAGTTCTTCCAAATTCGTAACCAGAGT...CATGCCCCATCTCTGAAGACCAGCTGTGAATACGTGAGCCTCTACCACCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp TCTATTTGTGTAAGACCCAACCCTGGGAAGGATGCCCGAGACAATAGCTATGCCGCAAGAGCCTTCTATTaGTGTAAGACCCAACCCTGG +
Preference number: 5 (lower is better)
Translates to: SICVRPNPGKDARDNSYAARAFY*CKTQPW
Trigger: CCAGGGTTGGGTCTTACACAAATAGAAGGCTCTTGC...GGCATAGCTATTGTCTCGGGCATCCTTCCCAGGGTTGGGTCTTACACAAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS GCA 90 bp ATTCTTGCGTGGGTATTGCTTCAGAGTAACTCGGCCCTTGTATTCTaGCTTGATGAAGTTGGTGGTGGATACCACGGTACCACATGTTCC +
Preference number: 5 (lower is better)
Translates to: ILAWVLLQSNSALVF*LDEVGGGYHGTTCS
Trigger: GGAACATGTGGTACCGTGGTATCCACCACCAACTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS-3UTR CAA 90 bp GAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGAAGCAAATTCTTGCGTGGGTATaGCTTCAGAGTAACTCGGCC +
Preference number: 5 (lower is better)
Translates to: EETLCKSHSLFDGLERKQILAWV*LQSNSA
Trigger: GGCCGAGTTACTCTGAAGCAATACCCACGCAAGAAT...TTGCTTCCTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CAA 90 bp AGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTAGGAAGGTTCGGGGCTaGTCACCTGCTACTGAAGAT +
Preference number: 5 (lower is better)
Translates to: RALRTHEAGIGHQQIDETRKVRG*SPATED
Trigger: ATCTTCAGTAGCAGGTGACAAGCCCCGAACCTTCCT...AGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CAA 90 bp AGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGGCTTGGAAAGGTGGCATTGGGACAATaGCTCTACATGCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: RHGRNTLQIPQSVRRLGKVALGQ*LYMPTA
Trigger: AGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCAC...CTTTCCAAGCCGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp CAAGTGGCATTGGGACAATTGCTCTACATGCCTACAGCTTACCTGTCAACTACAAGTCTGTTCGACGGCTaGGAAAGGAAGCAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: QVALGQLLYMPTAYLSTTSLFDG*ERKQVA
Trigger: TGCCACTTGCTTCCTTTCCAAGCCGTCGAACAGACT...TGTAGTTGACAGGTAAGCTGTAGGCATGTAGAGCAATTGTCCCAATGCCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS GCA 90 bp GTCAGCTGTGTTACCTCCACTAGGAACAGATTCTTGCGTGGGTATTaGTTCAGAGTAACTCGGCCCTTGTATTCTGCCTTGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VSCVTSTRNRFLRGY*FRVTRPLYSALMKL
Trigger: CAACTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAATCTGTTCCTAGTGGAGGTAACACAGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367091.8
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS-3UTR CAA 90 bp GAAGTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATATCTGCCTTGATGAAGTaGGTGGTGGATACCACGGTA +
Preference number: 5 (lower is better)
Translates to: EVMRALRTHEAGIGHQQISALMK*VVDTTV
Trigger: TACCGTGGTATCCACCACCAACTTCATCAAGGCAGA...TATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000463473.2
CDS-3UTR CAA 90 bp CTGTGGTCAAAGACATGGAAGAAACACTCTGCAAATCCCACAGTCTGTTCGACGAGGAAGCAAGTGGCATaGGGACAATTGCTCTACATG +
Preference number: 5 (lower is better)
Translates to: LWSKTWKKHSANPTVCSTRKQVA*GQLLYM
Trigger: CATGTAGAGCAATTGTCCCAATGCCACTTGCTTCCT...CGTCGAACAGACTGTGGGATTTGCAGAGTGTTTCTTCCATGTCTTTGACCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367091.8
ENST00000442471.4
CDS-3UTR CAA 90 bp GAAGTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAAAAGCCAGAAGTCCATaGTCCCTTCTAGAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: EVMRALRTHEAGIGHQQIKARSP*SLLECK
Trigger: CTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTT...TATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS-3UTR CAA 90 bp GTGATGAGGGCTCTGAGAACACATGAAGCAGGTATTGGACATCAGCAGATAGATCTTTCCTTCCCCTGCTaGCTATACATTGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VMRALRTHEAGIGHQQIDLSFPC*LYIVWN
Trigger: GTTCCAGACAATGTATAGCAAGCAGGGGAAGGAAAG...ATCTATCTGCTGATGTCCAATACCTGCTTCATGTGTTCTCAGAGCCCTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS-3UTR CAA 90 bp ACACATGAAGCAGGTATTGGACATCAGCAGATAGATGAGACTCCTTGGCACCACACTCTGGTTACGAATTaGGAAGAACTGGCATATGCA +
Preference number: 5 (lower is better)
Translates to: THEAGIGHQQIDETPWHHTLVTN*EELAYA
Trigger: TGCATATGCCAGTTCTTCCAAATTCGTAACCAGAGT...GTGGTGCCAAGGAGTCTCATCTATCTGCTGATGTCCAATACCTGCTTCATGTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
CDS GCA 90 bp AGCTGGTGTGGTAACTCTGGTTACGAATTTGGAAGAACTGGCATATaGAGGCATCTGGAACAAATAGGGCAGATGAAACCATTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: SWCGNSGYEFGRTGI*RHLEQIGQMKPFWS
Trigger: ACTCCAAAATGGTTTCATCTGCCCTATTTGTTCCAGATGCCTGCATATGCCAGTTCTTCCAAATTCGTAACCAGAGTTACCACACCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
ENST00000628511.2
CDS-3UTR CAA 90 bp TGTACTATCCAATCTGTGATGACATTCCCTGCTAATAAAAGACAACATAACTCAACTAGGAACAGATTCTaGCGTGGGTATTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: CTIQSVMTFPANKRQHNSTRNRF*RGYCFR
Trigger: TCTGAAGCAATACCCACGCAAGAATCTGTTCCTAGT...TGAGTTATGTTGTCTTTTATTAGCAGGGAATGTCATCACAGATTGGATAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367091.8
CDS CCA 72 bp GGGCGCGCATCCTCACGGCCAGTCGGCGGGCCCGCCTaGAGAGGGCTTCCCCACAAAGCCACGGGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: GRASSRPVGGPA*RGLPHKATGRG
Trigger: CCCTCTTCCCGTGGCTTTGTGGGGAAGCCCTCTCCAGGCGGGCCCGCCGACTGGCCGTGAGGATGCGCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474041.5
CDS CAA 72 bp GGGGGAGGAGTGGTGAACTGGAGGGACCTTGCCCCTTaGAGCTGGTGTGGTAACTCTGGTTACGAATTTGGA +
Preference number: 6 (lower is better)
Translates to: GGGVVNWRDLAP*SWCGNSGYEFG
Trigger: TCCAAATTCGTAACCAGAGTTACCACACCAGCTCAAAGGGGCAAGGTCCCTCCAGTTCACCACTCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
ENST00000628511.2
CDS CAA 90 bp CCCCCGATACTGGCAGGAAGTAAAGTGGCCAAAGCCAGAAGTCCATaGTCCCTTCTAGAGTGCAAGGTCCATCCAAGAGCCCCTAGAGAG +
Preference number: 6 (lower is better)
Translates to: PPILAGSKVAKARSP*SLLECKVHPRAPRE
Trigger: CTCTCTAGGGGCTCTTGGATGGACCTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCAGTATCGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000533312.1
CDS TCA 72 bp ATCAGCGGAGGAACCTACCACTGTGGACATTCAGGGTaGCTTTCTGGGTCTTTCCCCGGTCTGTGTTCATGC +
Preference number: 6 (lower is better)
Translates to: ISGGTYHCGHSG*LSGSFPGLCSC
Trigger: GCATGAACACAGACCGGGGAAAGACCCAGAAAGTCACCCTGAATGTCCACAGTGGTAGGTTCCTCCGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533312.1
CDS GCA 72 bp ATCCAAGAGCCCCTAGAGAGGGGGATGGAGACACGCTaGTTACTCAGGAACCCTTCACAATCTGGAACTGGA +
Preference number: 6 (lower is better)
Translates to: IQEPLERGMETR*LLRNPSQSGTG
Trigger: TCCAGTTCCAGATTGTGAAGGGTTCCTGAGTAAGCAGCGTGTCTCCATCCCCCTCTCTAGGGGCTCTTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442471.4
ENST00000528654.1
ENST00000530505.1
CDS CAA 90 bp CCCCCGATACTGGCAGGAAGTAAAGTGGCCAAAGCCAGAAGTCCATaGTCCCTTCTAGAGTGCAAGGTCCATCCAAGAGCCCACTGTTTC +
Preference number: 6 (lower is better)
Translates to: PPILAGSKVAKARSP*SLLECKVHPRAHCF
Trigger: GAAACAGTGGGCTCTTGGATGGACCTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCAGTATCGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529560.1
CDS TCA 72 bp CACATGCATTTCAGGAAGTGGGCACTTGATGGTAACTaGTCCGCCCAGCTCCCCCTCTACCTTTACTTCTGG +
Preference number: 6 (lower is better)
Translates to: HMHFRKWALDGN*SAQLPLYLYFW
Trigger: CCAGAAGTAAAGGTAGAGGGGGAGCTGGGCGGATCAGTTACCATCAAGTGCCCACTTCCTGAAATGCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS TCA 72 bp CCCATGATGGCTCGTATTCACTGTGGACATTCAGGGTaGCTTTCTGGGTCTTTCCCCGGTCTGTGTTCATGC +
Preference number: 6 (lower is better)
Translates to: PMMARIHCGHSG*LSGSFPGLCSC
Trigger: GCATGAACACAGACCGGGGAAAGACCCAGAAAGTCACCCTGAATGTCCACAGTGAATACGAGCCATCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367091.8
ENST00000525793.5
ENST00000529560.1
ENST00000628511.2
CDS CAA 72 bp CTGGCAGGAAGTAAAGTGGCCAAAGCCAGAAGTCCATaGTCCCTTCTAGAGTGCAAGGTCCATCCAAGAGCC +
Preference number: 6 (lower is better)
Translates to: LAGSKVAKARSP*SLLECKVHPRA
Trigger: GGCTCTTGGATGGACCTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
ENST00000525793.5
ENST00000528654.1
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
CDS CAA 90 bp GCTCGTATTCTGGCAGGAAGTAAAGTGGCCAAAGCCAGAAGTCCATaGTCCCTTCTAGAGTGCAAGGTCCATCCAAGAGCCCCTAGAGAG +
Preference number: 6 (lower is better)
Translates to: ARILAGSKVAKARSP*SLLECKVHPRAPRE
Trigger: CTCTCTAGGGGCTCTTGGATGGACCTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCAGAATACGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442471.4
CDS CAA 90 bp ACTCCATCTCTGGCAGGAAGTAAAGTGGCCAAAGCCAGAAGTCCATaGTCCCTTCTAGAGTGCAAGGTCCATCCAAGAGCCCCTAGAGAG +
Preference number: 6 (lower is better)
Translates to: TPSLAGSKVAKARSP*SLLECKVHPRAPRE
Trigger: CTCTCTAGGGGCTCTTGGATGGACCTTGCACTCTAGAAGGGACAATGGACTTCTGGCTTTGGCCACTTTACTTCCTGCCAGAGATGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530505.1
CDS TCA 72 bp CCATTTTGGAGTCTCAGGCATTGGCTGCTCTTCCCATaGTGGCTCGTATTCACTGTGGACATTCAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: PFWSLRHWLLFP*WLVFTVDIQGD
Trigger: GTCACCCTGAATGTCCACAGTGAATACGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367091.8
ENST00000525793.5
ENST00000529560.1
ENST00000628511.2
CDS GCA 72 bp TGGGTATTGCTTCAGAGTAACTCGGCCCTTGTATTCTaGCTTGATGAAGTTGGTGGTGGATACCACGGTACC +
Preference number: 6 (lower is better)
Translates to: WVLLQSNSALVF*LDEVGGGYHGT
Trigger: GGTACCGTGGTATCCACCACCAACTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCTGAAGCAATACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS CAA 72 bp TCTGTCAGCTGTGTTACCTCCACTAGGAACAGATTCTaGCGTGGGTATTGCTTCAGAGTAACTCGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: SVSCVTSTRNRF*RGYCFRVTRPL
Trigger: CAAGGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAATCTGTTCCTAGTGGAGGTAACACAGCTGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367091.8
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS CAA 90 bp TATTGCTTCAGAGTAACTCGGCCCTTGTATTCTGCCTTGATGAAGTaGGTGGTGGATACCACGGTACCACATGTTCCAGATCCAGCCATC +
Preference number: 6 (lower is better)
Translates to: YCFRVTRPLYSALMK*VVDTTVPHVPDPAI
Trigger: GATGGCTGGATCTGGAACATGTGGTACCGTGGTATCCACCACCAACTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCTGAAGCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS CAA 90 bp TTGCGTGGGTATTGCTTCAGAGTAACTCGGCCCTTGTATTCTGCCTaGATGAAGTTGGTGGTGGATACCACGGTACCACATGTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: LRGYCFRVTRPLYSA*MKLVVDTTVPHVPD
Trigger: ATCTGGAACATGTGGTACCGTGGTATCCACCACCAACTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCTGAAGCAATACCCACGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS CAA 90 bp AGGAACAGATTCTTGCGTGGGTATTGCTTCAGAGTAACTCGGCCCTaGTATTCTGCCTTGATGAAGTTGGTGGTGGATACCACGGTACCA +
Preference number: 6 (lower is better)
Translates to: RNRFLRGYCFRVTRP*YSALMKLVVDTTVP
Trigger: TGGTACCGTGGTATCCACCACCAACTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAATCTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS CAA 90 bp CTGTCACTTTCTGTCAGCTGTGTTACCTCCACTAGGAACAGATTCTaGCGTGGGTATTGCTTCAGAGTAACTCGGCCCTTGTATTCTGCC +
Preference number: 6 (lower is better)
Translates to: LSLSVSCVTSTRNRF*RGYCFRVTRPLYSA
Trigger: GGCAGAATACAAGGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAATCTGTTCCTAGTGGAGGTAACACAGCTGACAGAAAGTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367091.8
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS TCA 72 bp CCATTTTGGAGTCTCAGGCATTGGCTGCTCTTCCCATaGTGGCTCGTATTCTCCACTAGGAACAGATTCTTG +
Preference number: 6 (lower is better)
Translates to: PFWSLRHWLLFP*WLVFSTRNRFL
Trigger: CAAGAATCTGTTCCTAGTGGAGAATACGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS GCA 72 bp GATCCAGCCATCTCCCGGCACAGATATATCCTCACATaGATTTCAGGAAGTGGGCACTTGATGGTAACTGAT +
Preference number: 6 (lower is better)
Translates to: DPAISRHRYILT*ISGSGHLMVTD
Trigger: ATCAGTTACCATCAAGTGCCCACTTCCTGAAATGCATGTGAGGATATATCTGTGCCGGGAGATGGCTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS GCA 72 bp GTTACCTCCACTAGGAACAGATTCTTGCGTGGGTATTaGTTCAGAGTAACTCGGCCCTTGTATTCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: VTSTRNRFLRGY*FRVTRPLYSAL
Trigger: CAAGGCAGAATACAAGGGCCGAGTTACTCTGAAGCAATACCCACGCAAGAATCTGTTCCTAGTGGAGGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367091.8
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS CAA 72 bp AGAGTAACTCGGCCCTTGTATTCTGCCTTGATGAAGTaGGTGGTGGATACCACGGTACCACATGTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: RVTRPLYSALMK*VVDTTVPHVPD
Trigger: ATCTGGAACATGTGGTACCGTGGTATCCACCACCAACTTCATCAAGGCAGAATACAAGGGCCGAGTTACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367091.8
ENST00000463473.2
ENST00000525793.5
ENST00000529560.1
ENST00000530505.1
ENST00000533312.1
ENST00000628511.2
CDS CAA 72 bp AATAGGGCAGATGAAACCATTTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATGGCTCGTATTCTGGCA +
Preference number: 6 (lower is better)
Translates to: NRADETILESQA*AALPMMARILA
Trigger: TGCCAGAATACGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTGCCCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442471.4
CDS CAA 72 bp AATAGGGCAGATGAAACCATTTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATGGCTCGTATTCTCCAC +
Preference number: 6 (lower is better)
Translates to: NRADETILESQA*AALPMMARILH
Trigger: GTGGAGAATACGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTGCCCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463473.2
CDS CAA 90 bp TGGCATATGCAGGCATCTGGAACAAATAGGGCAGATGAAACCATTTaGGAGTCTCAGGCATTGGCTGCTCTTCCCATGATGGCTCGTATT +
Preference number: 6 (lower is better)
Translates to: WHMQASGTNRADETI*ESQALAALPMMARI
Trigger: AATACGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTGCCCTATTTGTTCCAGATGCCTGCATATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
ENST00000628511.2
CDS CAA 90 bp TCTGGAACAAATAGGGCAGATGAAACCATTTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATGGCTCGTATTCACTGTGGACATTCA +
Preference number: 6 (lower is better)
Translates to: SGTNRADETILESQA*AALPMMARIHCGHS
Trigger: TGAATGTCCACAGTGAATACGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTGCCCTATTTGTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367091.8
ENST00000525793.5
ENST00000628511.2
CDS CAA 90 bp TCTGGAACAAATAGGGCAGATGAAACCATTTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATGGCTCGTATTCTGGCAGGAAGTAAA +
Preference number: 6 (lower is better)
Translates to: SGTNRADETILESQA*AALPMMARILAGSK
Trigger: TTTACTTCCTGCCAGAATACGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTGCCCTATTTGTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442471.4
CDS CAA 72 bp AATAGGGCAGATGAAACCATTTTGGAGTCTCAGGCATaGGCTGCTCTTCCCATGATGGCTCGTATTCACTGT +
Preference number: 6 (lower is better)
Translates to: NRADETILESQA*AALPMMARIHC
Trigger: ACAGTGAATACGAGCCATCATGGGAAGAGCAGCCAATGCCTGAGACTCCAAAATGGTTTCATCTGCCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367091.8
ENST00000525793.5
ENST00000529560.1
ENST00000628511.2
CDS GCA 72 bp GGTAACTCTGGTTACGAATTTGGAAGAACTGGCATATaGAGGCATCTGGAACAAATAGGGCAGATGAAACCA +
Preference number: 6 (lower is better)
Translates to: GNSGYEFGRTGI*RHLEQIGQMKP
Trigger: TGGTTTCATCTGCCCTATTTGTTCCAGATGCCTGCATATGCCAGTTCTTCCAAATTCGTAACCAGAGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367091.8
ENST00000442471.4
ENST00000463473.2
ENST00000628511.2