RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCHSD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197948

Ensembl transcript IDs: ENST00000435817.7, ENST00000518499.1, ENST00000519800.1, ENST00000520747.1, ENST00000522126.5, ENST00000522386.1, ENST00000522763.5, ENST00000522783.5, ENST00000523856.5

Found 549 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCCTGCAGGACGGAGCCCCCTCCCATCATCACACAGTGCACCTaGGCTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGC +
Preference number: 1 (lower is better)
Translates to: PACRTEPPPIITQCT*ALQPLASIAAAARG
Trigger: GCCTCTTGCTGCGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGATGATGGGAGGGGGCTCCGTCCTGCAGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR GCA 90 bp GCAGGACGGAGCCCCCTCCCATCATCACACAGTGCACCTGGGCTCTaGAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACT +
Preference number: 1 (lower is better)
Translates to: AGRSPLPSSHSAPGL*SPLPPLQPQQEAST
Trigger: AGTGGAGGCCTCTTGCTGCGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGATGATGGGAGGGGGCTCCGTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR GCA 90 bp CACTCCCCTCCTCCCTGCTGTCCAGTGTGGATGCCACCTCCAGCCTaGAGGACGGAGCCCCCTCCCATCATCACACAGTGCACCTGGGCT +
Preference number: 1 (lower is better)
Translates to: HSPPPCCPVWMPPPA*RTEPPPIITQCTWA
Trigger: AGCCCAGGTGCACTGTGTGATGATGGGAGGGGGCTCCGTCCTGCAGGCTGGAGGTGGCATCCACACTGGACAGCAGGGAGGAGGGGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR GCA 90 bp GCCCCCTCCCATCATCACACAGTGCACCTGGGCTCTGCAGCCCCTTaGCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAG +
Preference number: 1 (lower is better)
Translates to: APSHHHTVHLGSAAP*LHCSRSKRPPLVRQ
Trigger: CTGACGGACAAGTGGAGGCCTCTTGCTGCGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGATGATGGGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR GCA 90 bp CATCATCACACAGTGCACCTGGGCTCTGCAGCCCCTTGCCTCCATTaGAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGACGCTCC +
Preference number: 1 (lower is better)
Translates to: HHHTVHLGSAAPCLH*SRSKRPPLVRQGRS
Trigger: GGAGCGTCCCTGACGGACAAGTGGAGGCCTCTTGCTGCGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGATGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR GCA 90 bp GGGCAGCAGACGGATGAGTGCCCCCTCAGGGAAGCTCAGCTCCTCTaGACTCTGTCCGGTGTAGCTGTACAGGGCCTGTGCCAGGAATGC +
Preference number: 1 (lower is better)
Translates to: GQQTDECPLREAQLL*TLSGVAVQGLCQEC
Trigger: GCATTCCTGGCACAGGCCCTGTACAGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTCCCTGAGGGGGCACTCATCCGTCTGCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR GCA 90 bp GCCGTCATCTACTCCATCTTGGGCCCGGGGCAGCAGACGGATGAGTaGCCCCTCAGGGAAGCTCAGCTCCTCTGCACTCTGTCCGGTGTA +
Preference number: 1 (lower is better)
Translates to: AVIYSILGPGQQTDE*PLREAQLLCTLSGV
Trigger: TACACCGGACAGAGTGCAGAGGAGCTGAGCTTCCCTGAGGGGGCACTCATCCGTCTGCTGCCCCGGGCCCAAGATGGAGTAGATGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR CCA 90 bp GGTAGGGGGCCCAGTGATCAGGCACCTGATCCCAAAAGTGGGCCTTaGCTCTTTCCTCCTGGACTGGGAGCTCCGGCAGAAGTCAGGCTA +
Preference number: 1 (lower is better)
Translates to: GRGPSDQAPDPKSGP*LFPPGLGAPAEVRL
Trigger: TAGCCTGACTTCTGCCGGAGCTCCCAGTCCAGGAGGAAAGAGCCAAGGCCCACTTTTGGGATCAGGTGCCTGATCACTGGGCCCCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CCA 90 bp GCCAGGAATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTaGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTTGAGATATCGC +
Preference number: 1 (lower is better)
Translates to: ARNAVGSAPQGLSLS*LLSGRERSGKLRYR
Trigger: GCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR CCA 90 bp CCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGTaGGGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGG +
Preference number: 1 (lower is better)
Translates to: PVTLASRVGWVMEPG*GKRWARTTRDLDGW
Trigger: CCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCCCCACCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR TCA 90 bp TGTCACTGTCTTGGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTTaGGATATCGCTCAGGGACAAAGCCTACCTCGCCGTGCTGGTTCC +
Preference number: 1 (lower is better)
Translates to: CHCLGCSLGGRGPGS*DIAQGQSLPRRAGS
Trigger: GGAACCAGCACGGCGAGGTAGGCTTTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR CCA 90 bp CGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTaGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACC +
Preference number: 1 (lower is better)
Translates to: RRPPALLAQEAQALA*PSCPLFIVNKSAQT
Trigger: GGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CCA 90 bp TGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCTaGGAGGGAGAGGTCCGGGAAGTTGAGATATCGCTCAGGGACAAA +
Preference number: 1 (lower is better)
Translates to: CGLCPAGIVTVLAAL*EGEVREVEISLRDK
Trigger: TTTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR TCA 90 bp TGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTaGGAAGGCCTCCCCTACCTTAGGCCAGAGGGAAGTAGCCACCAA +
Preference number: 1 (lower is better)
Translates to: WELRQKSGYTMCPTI*EGLPYLRPEGSSHQ
Trigger: TTGGTGGCTACTTCCCTCTGGCCTAAGGTAGGGGAGGCCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CCA 90 bp AGGCACCTGATCCCAAAAGTGGGCCTTGGCTCTTTCCTCCTGGACTaGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATC +
Preference number: 1 (lower is better)
Translates to: RHLIPKVGLGSFLLD*ELRQKSGYTMCPTI
Trigger: GATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAGTCCAGGAGGAAAGAGCCAAGGCCCACTTTTGGGATCAGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR TCA 90 bp TTCCAGCTTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTaGCAGCTTGAAGATAGGGACAGCAGCATCACTGGGGGTCAAGGC +
Preference number: 1 (lower is better)
Translates to: FQLLAVLLWIIDGVV*QLEDRDSSITGGQG
Trigger: GCCTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAAGCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR GCA 90 bp GGAGGTGAGGGTGGAAATAAGGGCGATTCCAGCTTTTGGCTGTGTTaGTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGG +
Preference number: 1 (lower is better)
Translates to: GGEGGNKGDSSFWLC*SGSLMVWSDSLKIG
Trigger: CCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAAGCTGGAATCGCCCTTATTTCCACCCTCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR GCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGGGCCTGTGCCAGGAATaGTGTGGGCTCTGCCCCGCA +
Preference number: 2 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGGLCQE*CGLCPA
Trigger: TGCGGGGCAGAGCCCACAGCATTCCTGGCACAGGCC...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CCA 90 bp ATCTGGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATGAGTTCAGGTGGCCCTaGGGGGCCAAGCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: IWVARIRGFSRRGRWWTHEFRWP*GAKQLF
Trigger: GAAGAGCTGCTTGGCCCCCCAGGGCCACCTGAACTC...ATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR GCA 90 bp ATGGACTGCACGAACACCGTGATGGCTCCCCCACAGACAGGAGCTGGGGCTCTGCTGGGAGCAGGCCCCTaGCCGTGGTGGGCCCCTAAA +
Preference number: 2 (lower is better)
Translates to: MDCTNTVMAPPQTGAGALLGAGP*PWWAPK
Trigger: TTTAGGGGCCCACCACGGGCAGGGGCCTGCTCCCAG...CAGAGCCCCAGCTCCTGTCTGTGGGGGAGCCATCACGGTGTTCGTGCAGTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CCA 90 bp CAGGAATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCCGGCGGGGGAGGTGGTaGACGCATCGGCCTGAGTCG +
Preference number: 2 (lower is better)
Translates to: QECCGLCPAGIVTVLAALRRGRW*THRPES
Trigger: CGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCG...GAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR GCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGAAGCCTACCTCGCCGTaGTGGTTCCGAGCCTTGACC +
Preference number: 2 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGKPTSP*WFRALT
Trigger: GGTCAAGGCTCGGAACCAGCACGGCGAGGTAGGCTT...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR CAA 90 bp AGCCCCCTCCCATCATCACACAGTGCACCTGGGCTCTGCAGCCCCTaGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCA +
Preference number: 2 (lower is better)
Translates to: SPLPSSHSAPGLCSP*PPLQPQQEASTCPS
Trigger: TGACGGACAAGTGGAGGCCTCTTGCTGCGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGATGATGGGAGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR TCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACATCTCCCTCCTCTATaGCCTCCAGCCACTCACCCT +
Preference number: 2 (lower is better)
Translates to: RGRWWTHRPESRCHHVQEHLPPL*PPATHP
Trigger: AGGGTGAGTGGCTGGAGGTCATAGAGGAGGGAGATG...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR TCA 90 bp ACGGCCCCCAAATTCTCCCCTCCAGAAGCCGTCATCTACTCCATCTTGGGCCCGGTGGACGCATCGGCCTaGGTCGAGGTGCCATCATGT +
Preference number: 2 (lower is better)
Translates to: TAPKFSPPEAVIYSILGPVDASA*VEVPSC
Trigger: ACATGATGGCACCTCGACTCAGGCCGATGCGTCCAC...CGGGCCCAAGATGGAGTAGATGACGGCTTCTGGAGGGGAGAATTTGGGGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CCA 90 bp CAGGGAAGCTCAGCTCCTCTGCACTCTGTCCGGTGTAGCTGTACAGGGCCTGTGGGACAGCAGCATCACTaGGGGTCAAGGCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: QGSSAPLHSVRCSCTGPVGQQHH*GSRLPW
Trigger: CCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCC...CACAGGCCCTGTACAGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR CAA 90 bp TGCCAGGAATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTaGGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTTGAGATATCG +
Preference number: 2 (lower is better)
Translates to: CQECCGLCPAGIVTV*AALWEGEVREVEIS
Trigger: CGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR GCA 90 bp CTGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTGAGAAGGAGCCCAAGGCAGGGATaGCTGCCATGGAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: LGAPAEVRLHNVPHNLRRSPRQG*LPWRGC
Trigger: GCAGCCTCTCCATGGCAGGCATCCCTGCCTTGGGCT...CCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAACCCTGGCATCCAGAGTaGGGTGGGTCATGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQPWHPE*GGSWSQ
Trigger: CTGGCTCCATGACCCACCCCACTCTGGATGCCAGGG...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR TCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGATTGATGGTGTGGTCTaGCAGCTTGAAGATAGGGAC +
Preference number: 2 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGIDGVV*QLEDRD
Trigger: GTCCCTATCTTCAAGCTGTCAGACCACACCATCAAT...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR GCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGCTGTACAGGGCCTGTaGCAGGAATGCTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQAVQGL*QECCGL
Trigger: GAGCCCACAGCATTCCTGGCACAGGCCCTGTACAGC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CCA 90 bp CTGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTGAGAAGGGGACAGCAGCATCACTaGGGGTCAAGGCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LGAPAEVRLHNVPHNLRRGQQHH*GSRLPW
Trigger: CCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCC...CCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGCGGCGGGGGAGGTGGTaGACGCATCGGCCTGAGTCG +
Preference number: 2 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMRRGRW*THRPES
Trigger: CGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCG...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR CAA 90 bp TTGTCACTGTCTTGGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTaGAGATATCGCTCAGGGACAAAGCCTACCTCGCCGTGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LSLSWLLSGRERSGK*RYRSGTKPTSPCWF
Trigger: GAACCAGCACGGCGAGGTAGGCTTTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR TCA 90 bp CTGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTGAGAAGGAACCCCTCGTGCACTTaGAGGGAACCCCAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: LGAPAEVRLHNVPHNLRRNPSCT*REPQSF
Trigger: GAAGCTCTGGGGTTCCCTTCAAGTGCACGAGGGGTT...CCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR GCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCGGCCTGAGTCGAGGTaGCATCATGTCCAGGAACCC +
Preference number: 2 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSRPESR*HHVQEP
Trigger: GGGTTCCTGGACATGATGGCACCTCGACTCAGGCCG...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR GCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGAATGCTGTGGGCTCTaGCCCGCAGGGATTGTCACT +
Preference number: 2 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQECCGL*PAGIVT
Trigger: AGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTGTCTTGGCTGCTCTCTaGGAGGGAGAGGTCCGGGAA +
Preference number: 2 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGVLAAL*EGEVRE
Trigger: TTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGAC...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR TCA 90 bp CAGGAATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCGTTGCTCTGGATCATTaGTGGTGTGGTCTGACAGCT +
Preference number: 2 (lower is better)
Translates to: QECCGLCPAGIVTVLAALVALDH*WCGLTA
Trigger: AGCTGTCAGACCACACCATCAATGATCCAGAGCAAC...GAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CCA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCGGACAGCAGCATCACTaGGGGTCAAGGCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: VNKSAQTITAASHPGSSSGQQHH*GSRLPW
Trigger: CCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCC...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp ATGGACTGCACGAACACCGTGATGGCTCCCCCACAGACAGGAGCTGGGGCTCTGTTGGCTGTGTTGCTCTaGATCATTGATGGTGTGGTC +
Preference number: 2 (lower is better)
Translates to: MDCTNTVMAPPQTGAGALLAVLL*IIDGVV
Trigger: GACCACACCATCAATGATCCAGAGCAACACAGCCAA...CAGAGCCCCAGCTCCTGTCTGTGGGGGAGCCATCACGGTGTTCGTGCAGTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGCCCAGGCCCTGGCCTaGCCTTCGTGCCCTTTATTC +
Preference number: 2 (lower is better)
Translates to: SINPLRPLQLLRILAPAPAQALA*PSCPLF
Trigger: GAATAAAGGGCACGAAGGCCAGGCCAGGGCCTGGGC...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGTGCCAGGAATGCTGTaGGCTCTGCCCCGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: SINPLRPLQLLRILAPAPVPGML*ALPRRD
Trigger: ATCCCTGCGGGGCAGAGCCCACAGCATTCCTGGCAC...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR GCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAATCAGACCATTACAGCTaGTTCGCATCCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQSDHYS*FASWLQ
Trigger: CTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGA...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTGGCAGGGCCAGGGGGTaGGTGGGCGTGAAAGCCCTC +
Preference number: 2 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVGRARG*VGVKAL
Trigger: GAGGGCTTTCACGCCCACCCACCCCCTGGCCCTGCC...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CAA 90 bp TGGAGCCAGGGTGGGGAAAGAGGTGGGCCAGAACTACTAGAGACCTaGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCAC +
Preference number: 2 (lower is better)
Translates to: WSQGGERGGPELLET*MDGFQPQRFQAFHH
Trigger: GTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCCCCACCCTGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR TCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCAGAGGTCCGGGAAGTTaGGATATCGCTCAGGGACAA +
Preference number: 2 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSRGPGS*DIAQGQ
Trigger: TTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCT...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR GCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGAAGCTCAGCTCCTCTaGACTCTGTCCGGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: INPLRPLQLLRILAPAPDEAQLL*TLSGVA
Trigger: AGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAATTGGCTGTGTTGCTCTaGATCATTGATGGTGTGGTC +
Preference number: 2 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQLAVLL*IIDGVV
Trigger: GACCACACCATCAATGATCCAGAGCAACACAGCCAA...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATATCAGGTGAGGGGATCTaGGTGGCCAGGATCCGGGGC +
Preference number: 2 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKISGEGI*VARIRG
Trigger: GCCCCGGATCCTGGCCACCCAGATCCCCTCACCTGA...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR CAA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTaGAAGATAGGGACAGCAGCATCACTGGGGGTCAAGGCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: FWLCCSGSLMVWSDS*KIGTAASLGVKASL
Trigger: CAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR TCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCATTGATGGTGTGGTCTaGCAGCTTGAAGATAGGGAC +
Preference number: 2 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSIDGVV*QLEDRD
Trigger: GTCCCTATCTTCAAGCTGTCAGACCACACCATCAAT...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR GCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCAGACCATTACAGCTaGTTCGCATCCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: INPLRPLQLLRILAPAPDSDHYS*FASWLQ
Trigger: CTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGA...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR GCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCCGGCCTGAGTCGAGGTaGCATCATGTCCAGGAACCC +
Preference number: 2 (lower is better)
Translates to: RALYSLSINPLRPLQLLRRPESR*HHVQEP
Trigger: GGGTTCCTGGACATGATGGCACCTCGACTCAGGCCG...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCGGCGATTCCAGCTTTTaGCTGTGTTGCTCTGGATCA +
Preference number: 2 (lower is better)
Translates to: VNKSAQTITAASHPGSSSGDSSF*LCCSGS
Trigger: TGATCCAGAGCAACACAGCCAAAAGCTGGAATCGCC...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGAGAGACCTTGATGGATaGTTTCCAGCCCCAGAGATT +
Preference number: 2 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRRDLDG*FPAPEI
Trigger: AATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCT...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGTCATGGAGCCAGGGTaGGGAAAGAGGTGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RALYSLSINPLRPLQLLRVMEPG*GKRWAR
Trigger: TCTGGCCCACCTCTTTCCCCACCCTGGCTCCATGAC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCCTGGCATCCAGAGTaGGGTGGGTCATGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVPWHPE*GGSWSQ
Trigger: CTGGCTCCATGACCCACCCCACTCTGGATGCCAGGG...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGGGTCAAGGCTTCCCTaGCCTTCAGGTGAGGGGATC +
Preference number: 2 (lower is better)
Translates to: RALYSLSINPLRPLQLLRGSRLP*PSGEGI
Trigger: GATCCCCTCACCTGAAGGCCAGGGAAGCCTTGACCC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR TCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGTTGCTCTGGATCATTaGTGGTGTGGTCTGACAGCT +
Preference number: 2 (lower is better)
Translates to: INPLRPLQLLRILAPAPDVALDH*WCGLTA
Trigger: AGCTGTCAGACCACACCATCAATGATCCAGAGCAAC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGGCGATTCCAGCTTTTaGCTGTGTTGCTCTGGATCA +
Preference number: 2 (lower is better)
Translates to: INPLRPLQLLRILAPAPDGDSSF*LCCSGS
Trigger: TGATCCAGAGCAACACAGCCAAAAGCTGGAATCGCC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCAAGCTGCTTCGCATCCTaGCTCCAGCTCCTGATTCCC +
Preference number: 2 (lower is better)
Translates to: TTRDLDGWFPAPEISGISSCFAS*LQLLIP
Trigger: GGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCT...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp GAGGTAATCTCATCTTCCCATCACCTACTTAAACTATTTAAGCCTTTCGGCTCCGGCCCCTGCCCGTGGTaGGCCCCTAAAGCAATAGCA +
Preference number: 2 (lower is better)
Translates to: EVISSSHHLLKLFKPFGSGPCPW*APKAIA
Trigger: TGCTATTGCTTTAGGGGCCCACCACGGGCAGGGGCC...GGAGCCGAAAGGCTTAAATAGTTTAAGTAGGTGATGGGAAGATGAGATTACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCGTGAGGGGATCTGGGTaGCCAGGATCCGGGGCTTTA +
Preference number: 2 (lower is better)
Translates to: ALYSLSINPLRPLQLLRIVRGSG*PGSGAL
Trigger: TAAAGCCCCGGATCCTGGCCACCCAGATCCCCTCAC...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR TCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTATTGATGGTGTGGTCTaGCAGCTTGAAGATAGGGAC +
Preference number: 2 (lower is better)
Translates to: SINPLRPLQLLRILAPAPIDGVV*QLEDRD
Trigger: GTCCCTATCTTCAAGCTGTCAGACCACACCATCAAT...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR TCA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAAGTGGACGCATCGGCCTaGGTCGAGGTGCCATCATGT +
Preference number: 2 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKVDASA*VEVPSC
Trigger: ACATGATGGCACCTCGACTCAGGCCGATGCGTCCAC...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR GCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTACTTCCACCTGGAGTTaGACAGTCTCAGGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVTSTWS*TVSGWG
Trigger: CCCCCAGCCTGAGACTGTGCAACTCCAGGTGGAAGT...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR GCA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAACAGCAGACGGATGAGTaGCCCCTCAGGGAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKQQTDE*PLREAQ
Trigger: CTGAGCTTCCCTGAGGGGGCACTCATCCGTCTGCTG...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CCA 90 bp GAGGTAATCTCATCTTCCCATCACCTACTTAAACTATTTAAGCCTTTCGGCTCCGTCATGGAGCCAGGGTaGGGAAAGAGGTGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: EVISSSHHLLKLFKPFGSVMEPG*GKRWAR
Trigger: TCTGGCCCACCTCTTTCCCCACCCTGGCTCCATGAC...GGAGCCGAAAGGCTTAAATAGTTTAAGTAGGTGATGGGAAGATGAGATTACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR GCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTAGCTTTTGGCTGTGTTaGTCTGGATCATTGATGGTG +
Preference number: 2 (lower is better)
Translates to: SINPLRPLQLLRILAPAPSFWLC*SGSLMV
Trigger: CACCATCAATGATCCAGAGCAACACAGCCAAAAGCT...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR GCA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAATGTCACTGTCTTGGCTaGTCTCTGGGAGGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIECHCLG*SLGGRG
Trigger: ACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACA...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR CAA 90 bp AGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGTCCAGGGCTTaGTCTATCAGGTACAATGTTCACTATTTGAGTTACAGGTACACT +
Preference number: 2 (lower is better)
Translates to: SRGAIMSRNPGKSRA*SIRYNVHYLSYRYT
Trigger: AGTGTACCTGTAACTCAAATAGTGAACATTGTACCTGATAGACAAAGCCCTGGACTTCCCTGGGTTCCTGGACATGATGGCACCTCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR GCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGAGCTTTTGGCTGTGTTaGTCTGGATCATTGATGGTG +
Preference number: 2 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMSFWLC*SGSLMV
Trigger: CACCATCAATGATCCAGAGCAACACAGCCAAAAGCT...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR GCA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAAGCTTTTGGCTGTGTTaGTCTGGATCATTGATGGTG +
Preference number: 2 (lower is better)
Translates to: WARTTRDLDGWFPAPEISSFWLC*SGSLMV
Trigger: CACCATCAATGATCCAGAGCAACACAGCCAAAAGCT...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGGATCATTGATGGTGTaGTCTGACAGCTTGAAGATA +
Preference number: 2 (lower is better)
Translates to: INPLRPLQLLRILAPAPDGSLMV*SDSLKI
Trigger: TATCTTCAAGCTGTCAGACCACACCATCAATGATCC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTGGCGATTCCAGCTTTTaGCTGTGTTGCTCTGGATCA +
Preference number: 2 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVGDSSF*LCCSGS
Trigger: TGATCCAGAGCAACACAGCCAAAAGCTGGAATCGCC...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGGATCATTGATGGTGTaGTCTGACAGCTTGAAGATA +
Preference number: 2 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLGSLMV*SDSLKI
Trigger: TATCTTCAAGCTGTCAGACCACACCATCAATGATCC...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CCA 90 bp GAGGTAATCTCATCTTCCCATCACCTACTTAAACTATTTAAGCCTTTCGGCTCCAGAGACCTTGATGGATaGTTTCCAGCCCCAGAGATT +
Preference number: 2 (lower is better)
Translates to: EVISSSHHLLKLFKPFGSRDLDG*FPAPEI
Trigger: AATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCT...GGAGCCGAAAGGCTTAAATAGTTTAAGTAGGTGATGGGAAGATGAGATTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CCA 72 bp GGGTCAAGGCTTCCCTGGCCTTCAGGTGAGGGGATCTaGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: GSRLPWPSGEGI*VARIRGFSRRG
Trigger: CCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCCAGATCCCCTCACCTGAAGGCCAGGGAAGCCTTGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR CCA 72 bp GTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTaGTGGACGCATCGGCCTGAGTCGAGGTGCCATCAT +
Preference number: 3 (lower is better)
Translates to: VARIRGFSRRGR*WTHRPESRCHH
Trigger: ATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR GCA 72 bp GCCTGCAGGACGGAGCCCCCTCCCATCATCACACAGTaGACCTGGGCTCTGCAGCCCCTTGCCTCCATTGCA +
Preference number: 3 (lower is better)
Translates to: ACRTEPPPIITQ*TWALQPLASIA
Trigger: TGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGATGATGGGAGGGGGCTCCGTCCTGCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CCA 72 bp AGGACGGAGCCCCCTCCCATCATCACACAGTGCACCTaGGCTCTGCAGCCCCTTGCCTCCATTGCAGCCGCA +
Preference number: 3 (lower is better)
Translates to: RTEPPPIITQCT*ALQPLASIAAA
Trigger: TGCGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGATGATGGGAGGGGGCTCCGTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR GCA 72 bp AGCCCCCTCCCATCATCACACAGTGCACCTGGGCTCTaGAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAG +
Preference number: 3 (lower is better)
Translates to: SPLPSSHSAPGL*SPLPPLQPQQE
Trigger: CTCTTGCTGCGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGATGATGGGAGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CAA 90 bp ATCTGGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATTGCTGGTTCCGAGCCTaGACCCATTCGTCAGCATCT +
Preference number: 3 (lower is better)
Translates to: IWVARIRGFSRRGRWWTHCWFRA*THSSAS
Trigger: AGATGCTGACGAATGGGTCAAGGCTCGGAACCAGCA...ATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR GCA 72 bp ACGGATGAGTGCCCCCTCAGGGAAGCTCAGCTCCTCTaGACTCTGTCCGGTGTAGCTGTACAGGGCCTGTGC +
Preference number: 3 (lower is better)
Translates to: TDECPLREAQLL*TLSGVAVQGLC
Trigger: GCACAGGCCCTGTACAGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTCCCTGAGGGGGCACTCATCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CAA 90 bp TTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTGTGGTCTGACAGCTaGAAGATAGGGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: FSRRGRWWTHRPESRCHHVWSDS*KIGTAA
Trigger: TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACAC...ATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGTGTTGCTCTGGATCATaGATGGTGTGGTCTGACAGC +
Preference number: 3 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGCCSGS*MVWSDS
Trigger: GCTGTCAGACCACACCATCAATGATCCAGAGCAACA...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR TCA 72 bp CTTGGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTTaGGATATCGCTCAGGGACAAAGCCTACCTCGCCGT +
Preference number: 3 (lower is better)
Translates to: LGCSLGGRGPGS*DIAQGQSLPRR
Trigger: ACGGCGAGGTAGGCTTTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR GCA 72 bp AGTCTCTTCTCCTTCCCCTGCCTGCAACAGGCTGCCTaGCCCGCCTTCCCCAACACCTCGCTCCATATGATA +
Preference number: 3 (lower is better)
Translates to: SLFSFPCLQQAA*PAFPNTSLHMI
Trigger: TATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGCAGCCTGTTGCAGGCAGGGGAAGGAGAAGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CCA 72 bp CCCAGTGATCAGGCACCTGATCCCAAAAGTGGGCCTTaGCTCTTTCCTCCTGGACTGGGAGCTCCGGCAGAA +
Preference number: 3 (lower is better)
Translates to: PSDQAPDPKSGP*LFPPGLGAPAE
Trigger: TTCTGCCGGAGCTCCCAGTCCAGGAGGAAAGAGCCAAGGCCCACTTTTGGGATCAGGTGCCTGATCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CCA 72 bp TGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCTaGGAGGGAGAGGTCCGGGAAGTTGAGATATCGCTC +
Preference number: 3 (lower is better)
Translates to: CPAGIVTVLAAL*EGEVREVEISL
Trigger: GAGCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CAA 90 bp ACGGCCCCCAAATTCTCCCCTCCAGAAGCCGTCATCTACTCCATCTTGGGCCCGGAGAGGTCCGGGAAGTaGAGATATCGCTCAGGGACA +
Preference number: 3 (lower is better)
Translates to: TAPKFSPPEAVIYSILGPERSGK*RYRSGT
Trigger: TGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTC...CGGGCCCAAGATGGAGTAGATGACGGCTTCTGGAGGGGAGAATTTGGGGGCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CAA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGGGATTGTCACTGTCTaGGCTGCTCTCTGGGAGGGA +
Preference number: 3 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQGIVTV*AALWEG
Trigger: TCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR TCA 72 bp AGGACTCAGGGACAGCAGCCTAACCCCTCGTGCACTTaGAGGGAACCCCAGAGCTTCTGCAGAGCCAACACT +
Preference number: 3 (lower is better)
Translates to: RTQGQQPNPSCT*REPQSFCRANT
Trigger: AGTGTTGGCTCTGCAGAAGCTCTGGGGTTCCCTTCAAGTGCACGAGGGGTTAGGCTGCTGTCCCTGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR TCA 72 bp CGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTaGGAAGGCCTCCCCTACCTTAGGCCAGAGGGAAGT +
Preference number: 3 (lower is better)
Translates to: RQKSGYTMCPTI*EGLPYLRPEGS
Trigger: ACTTCCCTCTGGCCTAAGGTAGGGGAGGCCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CAA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGGGGCGATTCCAGCTTTaGGCTGTGTTGCTCTGGATC +
Preference number: 3 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRGRFQL*AVLLWI
Trigger: GATCCAGAGCAACACAGCCAAAAGCTGGAATCGCCC...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CAA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGGCAAGTTTCCACCCTaGGAGGTGAGGGTGGAAATA +
Preference number: 3 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQGKFPP*EVRVEI
Trigger: TATTTCCACCCTCACCTCCAAGGGTGGAAACTTGCC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR GCA 72 bp TTGAGATATCGCTCAGGGACAAAGCCTACCTCGCCGTaGTGGTTCCGAGCCTTGACCCATTCGTCAGCATCT +
Preference number: 3 (lower is better)
Translates to: LRYRSGTKPTSP*WFRALTHSSAS
Trigger: AGATGCTGACGAATGGGTCAAGGCTCGGAACCAGCACGGCGAGGTAGGCTTTGTCCCTGAGCGATATCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR TCA 72 bp AGAGGCAAATGGGCAGCCAAGCAAACCAGACACTTCTaGTCACCAGGTAGGAAAACACAGCCGGGACTGCAC +
Preference number: 3 (lower is better)
Translates to: RGKWAAKQTRHF*SPGRKTQPGLH
Trigger: GTGCAGTCCCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCCATTTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CAA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGGGAAGTCCAGGGCTTaGTCTATCAGGTACAATGTT +
Preference number: 3 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQGKSRA*SIRYNV
Trigger: AACATTGTACCTGATAGACAAAGCCCTGGACTTCCC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCAGGGCGATTCCAGCTTTaGGCTGTGTTGCTCTGGATC +
Preference number: 3 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAAGRFQL*AVLLWI
Trigger: GATCCAGAGCAACACAGCCAAAAGCTGGAATCGCCC...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGGCAAGTTTCCACCCTaGGAGGTGAGGGTGGAAATA +
Preference number: 3 (lower is better)
Translates to: INPLRPLQLLRILAPAPDGKFPP*EVRVEI
Trigger: TATTTCCACCCTCACCTCCAAGGGTGGAAACTTGCC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTGTCATCTACTCCATCTaGGGCCCGGGGCAGCAGACG +
Preference number: 3 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVVIYSI*GPGQQT
Trigger: CGTCTGCTGCCCCGGGCCCAAGATGGAGTAGATGAC...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
3UTR-3UTR CAA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGGGAAGTCCAGGGCTTaGTCTATCAGGTACAATGTT +
Preference number: 3 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPGKSRA*SIRYNV
Trigger: AACATTGTACCTGATAGACAAAGCCCTGGACTTCCC...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR CCA 72 bp GGAGGTGAGGGTGGAAATAAGGGCGATTCCAGCTTTTaGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCT +
Preference number: 3 (lower is better)
Translates to: GGEGGNKGDSSF*LCCSGSLMVWS
Trigger: AGACCACACCATCAATGATCCAGAGCAACACAGCCAAAAGCTGGAATCGCCCTTATTTCCACCCTCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTCAGCTTTTGGCTGTGTaGCTCTGGATCATTGATGGT +
Preference number: 3 (lower is better)
Translates to: SINPLRPLQLLRILAPAPQLLAV*LWIIDG
Trigger: ACCATCAATGATCCAGAGCAACACAGCCAAAAGCTG...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGAACTACTAGAGACCTaGATGGATGGTTTCCAGCCC +
Preference number: 3 (lower is better)
Translates to: WARTTRDLDGWFPAPEISELLET*MDGFQP
Trigger: GGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTC...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR GCA 72 bp GGTGGAAATAAGGGCGATTCCAGCTTTTGGCTGTGTTaGTCTGGATCATTGATGGTGTGGTCTGACAGCTTG +
Preference number: 3 (lower is better)
Translates to: GGNKGDSSFWLC*SGSLMVWSDSL
Trigger: CAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAAGCTGGAATCGCCCTTATTTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR CCA 72 bp AGCTTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTaGTCTGACAGCTTGAAGATAGGGACAGCAGCATCA +
Preference number: 3 (lower is better)
Translates to: SFWLCCSGSLMV*SDSLKIGTAAS
Trigger: TGATGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp GAGGTAATCTCATCTTCCCATCACCTACTTAAACTATTTAAGCCTTTCGGCTCCGTGTGGTCTGACAGCTaGAAGATAGGGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: EVISSSHHLLKLFKPFGSVWSDS*KIGTAA
Trigger: TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACAC...GGAGCCGAAAGGCTTAAATAGTTTAAGTAGGTGATGGGAAGATGAGATTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR-3UTR CAA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAAGTGTGGTCTGACAGCTaGAAGATAGGGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKVWSDS*KIGTAA
Trigger: TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACAC...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAATGTTGCTCTGGATCATaGATGGTGTGGTCTGACAGC +
Preference number: 3 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKCCSGS*MVWSDS
Trigger: GCTGTCAGACCACACCATCAATGATCCAGAGCAACA...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAACAGCTTTTGGCTGTGTaGCTCTGGATCATTGATGGT +
Preference number: 3 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKQLLAV*LWIIDG
Trigger: ACCATCAATGATCCAGAGCAACACAGCCAAAAGCTG...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
3UTR-3UTR CAA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCGTGCCCTTTATTCATaGTCAATAAATCCGCTCAGA +
Preference number: 3 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVRALYS*SINPLR
Trigger: TCTGAGCGGATTTATTGACAATGAATAAAGGGCACG...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCACCTGGGAGGTTGTCTaGTCCCCGCGGTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: GWPGSGALAGGGGGGRIGTWEVV*SPRWAC
Trigger: GCATGCCCACCGCGGGGAGCAGACAACCTCCCAGGT...GCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCAAGAGGCCCAGGCCCTaGCCTGGCCTTCGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GWPGSGALAGGGGGGRIGKRPRP*PGLRAL
Trigger: AAGGGCACGAAGGCCAGGCCAGGGCCTGGGCCTCTT...GCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGGGCCCCCAGCCACGGTaGCATCCAGCAGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGGPQPR*HPAGSA
Trigger: GGCGCTGCCTGCTGGATGCCACCGTGGCTGGGGGCC...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCAAGCCTACCTCGCCGTaGTGGTTCCGAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: GWPGSGALAGGGGGGRIGKPTSP*WFRALT
Trigger: GGTCAAGGCTCGGAACCAGCACGGCGAGGTAGGCTT...GCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGGGAGAGAGGTCCCTCTaGGACAGCCGAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRGERSL*DSRASL
Trigger: CAGTGAGGCTCGGCTGTCCCAGAGGGACCTCTCTCC...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGGTGCCAGGAATGCTGTaGGCTCTGCCCCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRVPGML*ALPRRD
Trigger: ATCCCTGCGGGGCAGAGCCCACAGCATTCCTGGCAC...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGCGGCTGGTCAAGCGCTaGACCTCTTTCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRRLVKR*TSFSRP
Trigger: TGGCCTGGAGAAAGAGGTTCAGCGCTTGACCAGCCG...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGCTGCAACAGGCTGCCTaGCCCGCCTTCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGLQQAA*PAFPNT
Trigger: GGTGTTGGGGAAGGCGGGGCAGGCAGCCTGTTGCAG...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGGGGCCAGCCAGTTTCTaGAGTGCCTGCCCATACTCC +
Preference number: 4 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRGPASF*SACPYS
Trigger: GGAGTATGGGCAGGCACTCCAGAAACTGGCTGGCCC...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTATCGGTCAGACGCCTaGAGTCGGGTTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRYRSDA*SRVWPP
Trigger: TGGGGGCCAAACCCGACTCCAGGCGTCTGACCGATA...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGGTCTGCTCCCCGCGGTaGGCATGCTCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGVCSPR*ACSRMT
Trigger: GGTCATCCTGGAGCATGCCCACCGCGGGGAGCAGAC...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCTCCCAGCTTACCTaGGAGGTTGTCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRCSQLT*EVVCSP
Trigger: CGGGGAGCAGACAACCTCCCAGGTAAGCTGGGAGCA...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGTCAGGTGAGGGGATCTaGGTGGCCAGGATCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGSGEGI*VARIRG
Trigger: GCCCCGGATCCTGGCCACCCAGATCCCCTCACCTGA...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGGCCACTCACCCTCCGTaGTTGTCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRATHPP*LSAHPH
Trigger: GTGAGGATGAGCTGACAATCACGGAGGGTGAGTGGC...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGGGGCAGCAGACGGATaGGTGCCCCCTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GGGGRIGLSRGAIMSRNPGAADG*VPPQGS
Trigger: GCTTCCCTGAGGGGGCACTCATCCGTCTGCTGCCCC...TGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGAGCACATGTACCTCCTaGATCCCCAGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRSTCTS*IPRQDR
Trigger: CCTGTCCTGCCTGGGGATTCAGGAGGTACATGTGCT...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522783.5
CDS-3UTR GCA 90 bp GGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGTGCAGCACCTCAGCCTaGGCCCTCTGGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GGGGGGRIGLSRGAIMSRCSTSA*ALWRFS
Trigger: AGAGAACCTCCAGAGGGCGCAGGCTGAGGTGCTGCA...CCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGTCCCGCTCTGAAGCCTaGTGCCGCCTCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGSRSEA*CRLCSS
Trigger: ACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGA...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp GGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCTCAGACCATTACAGCTaGTTCGCATCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GWPGSGALAGGGGGGRIGSDHYS*FASWLQ
Trigger: CTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGA...GCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ATCTGGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATAGCCGCCGCTCCCGATaGCCATGGTTCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: IWVARIRGFSRRGRWWTHSRRSR*PWFWIL
Trigger: CAAGATCCAGAACCATGGGCATCGGGAGCGGCGGCT...ATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522783.5
CDS-3UTR GCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGAGCCGCCTTCTCCTGTaGCAAGGCCCACACACGTTC +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGSRLLL*QGPHTF
Trigger: GAACGTGTGTGGGCCTTGGCACAGGAGAAGGCGGCT...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGGGGCGGACAGCTTGGTaGTCAGTTTCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: GGGGGGRIGLSRGAIMSRGRTAW*SVSGDW
Trigger: CCAGTCTCCAGAAACTGAGCACCAAGCTGTCCGCCC...CCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACGGGCTGCTTGCAGCTaGTGGGAGTACTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RGRWWTHRPESRCHHVQERAACS*WEYWAD
Trigger: GTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCG...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAATCCCGCTCTGAAGCCTaGTGCCGCCTCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGRWWTHRPESRCHHVQESRSEA*CRLCSS
Trigger: ACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGA...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp ATGGACTGCACGAACACCGTGATGGCTCCCCCACAGACAGGAGCTGGGGCTCTGCACCTGGCTCACCTGTaGCCGGCGGATGCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: MDCTNTVMAPPQTGAGALHLAHL*PADALS
Trigger: CGAGAGAGCATCCGCCGGGCACAGGTGAGCCAGGTG...CAGAGCCCCAGCTCCTGTCTGTGGGGGAGCCATCACGGTGTTCGTGCAGTCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp CAGGGAAGCTCAGCTCCTCTGCACTCTGTCCGGTGTAGCTGTACAGGGCCTGTGTCTAAGCCAGCCCCCTaGAGCAGGGCCAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QGSSAPLHSVRCSCTGPVSKPAP*SRASRA
Trigger: TGCCCGGCTGGCCCTGCTGCAGGGGGCTGGCTTAGA...CACAGGCCCTGTACAGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp GGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGTCTGCTCCCCGCGGTaGGCATGCTCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: GGGGRIGLSRGAIMSRNPVCSPR*ACSRMT
Trigger: GGTCATCCTGGAGCATGCCCACCGCGGGGAGCAGAC...TGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAAGGAGAGAGGTCCCTCTaGGACAGCCGAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RGRWWTHRPESRCHHVQEGERSL*DSRASL
Trigger: CAGTGAGGCTCGGCTGTCCCAGAGGGACCTCTCTCC...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGCCTACCTCGCCGTGCTaGTTCCGAGCCTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGPTSPC*FRALTH
Trigger: ATGGGTCAAGGCTCGGAACCAGCACGGCGAGGTAGG...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGCTCTGCTGCCAGGTCTaGAGGATGCTCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGLCCQV*RMLSCS
Trigger: GGAACAGCTGAGCATCCTTCAGACCTGGCAGCAGAG...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATGGACTGCACGAACACCGTGATGGCTCCCCCACAGACAGGAGCTGGGGCTCTGCTGGGAGTACTGGGCTaGCTGGGCGGACAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: MDCTNTVMAPPQTGAGALLGVLG*LGGQLG
Trigger: ACCAAGCTGTCCGCCCAGTCAGCCCAGTACTCCCAG...CAGAGCCCCAGCTCCTGTCTGTGGGGGAGCCATCACGGTGTTCGTGCAGTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGGCTGGTTCCGAGCCTTaGCCCATTCGTCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGAGSEP*PIRQHL
Trigger: GAGATGCTGACGAATGGGTCAAGGCTCGGAACCAGC...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCATTGATGGTGTGGTCTaGCAGCTTGAAGATAGGGAC +
Preference number: 4 (lower is better)
Translates to: GWPGSGALAGGGGGGRIGIDGVV*QLEDRD
Trigger: GTCCCTATCTTCAAGCTGTCAGACCACACCATCAAT...GCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGCACCGAACACTGTCCTaGCCCTGCTGTCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGHRTLS*PCCPSH
Trigger: GTGAGATGGACAGCAGGGGCAGGACAGTGTTCGGTG...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp TTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATTGCAGCACCTCAGCCTaGGCCCTCTGGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSRRGRWWTHRPESRCHHCSTSA*ALWRFS
Trigger: AGAGAACCTCCAGAGGGCGCAGGCTGAGGTGCTGCA...ATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGCTCTGCTCCAGTCGTTaGAGTACCCGATGCCCATGG +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGLCSSR*STRCPW
Trigger: CCATGGGCATCGGGTACTGCAACGACTGGAGCAGAG...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp GGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGGAAGCTCAGCTCCTCTaGACTCTGTCCGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GGGGGGRIGLSRGAIMSREAQLL*TLSGVA
Trigger: AGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTC...CCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATCGGCCTGAGTCGAGGTaGCATCATGTCCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: FSRRGRWWTHRPESRCHHRPESR*HHVQEP
Trigger: GGGTTCCTGGACATGATGGCACCTCGACTCAGGCCG...ATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAAGGGCCAGCCAGTTTCTaGAGTGCCTGCCCATACTCC +
Preference number: 4 (lower is better)
Translates to: RGRWWTHRPESRCHHVQEGPASF*SACPYS
Trigger: GGAGTATGGGCAGGCACTCCAGAAACTGGCTGGCCC...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGGGCCCCCAGCCACGGTaGCATCCAGCAGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRGPQPR*HPAGSA
Trigger: GGCGCTGCCTGCTGGATGCCACCGTGGCTGGGGGCC...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGCTGATCAGTCCCTGCTaGCTGAAACTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGGGGRIGLSRGAIMSRLISPC*LKLLRW
Trigger: CCACCTCAGCAGTTTCAGCCAGCAGGGACTGATCAG...CCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCTACCTCGCCGTGCTaGTTCCGAGCCTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: RGRWWTHRPESRCHHVQEPTSPC*FRALTH
Trigger: ATGGGTCAAGGCTCGGAACCAGCACGGCGAGGTAGG...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAATCATCTACTCCATCTTaGGCCCGGGGCAGCAGACGG +
Preference number: 4 (lower is better)
Translates to: RGRWWTHRPESRCHHVQESSTPS*ARGSRR
Trigger: CCGTCTGCTGCCCCGGGCCCAAGATGGAGTAGATGA...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGGCCCAGGCCCTGGCCTaGCCTTCGTGCCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: GGRIGLSRGAIMSRNPGKAQALA*PSCPLF
Trigger: GAATAAAGGGCACGAAGGCCAGGCCAGGGCCTGGGC...CTTCCCTGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp AATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCTGGGAAGAGGCCCAGGCCCTaGCCTGGCCTTCGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: NAVGSAPQGLSLSWLLSGKRPRP*PGLRAL
Trigger: AAGGGCACGAAGGCCAGGCCAGGGCCTGGGCCTCTT...CCCAGAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR TCA 90 bp GGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGGTCCCTCAAGTGCTCTaGCAGCTCACTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGRIGLSRGAIMSRNPGKVPQVL*QLTDQG
Trigger: GCCCTGGTCAGTGAGCTGTCAGAGCACTTGAGGGAC...CTTCCCTGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGTCCCTCAAGTGCTCTaGCAGCTCACTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGGGRIGLSRGAIMSRNPVPQVL*QLTDQG
Trigger: GCCCTGGTCAGTGAGCTGTCAGAGCACTTGAGGGAC...TGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGATGTGCCCCACAATCTaGGAAGGCCTCCCCTACCTT +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGMCPTI*EGLPYL
Trigger: AAGGTAGGGGAGGCCTTCTCAGATTGTGGGGCACAT...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp GGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGAGCCGCCTTCTCCTGTaGCAAGGCCCACACACGTTC +
Preference number: 4 (lower is better)
Translates to: GGRIGLSRGAIMSRNPGKSRLLL*QGPHTF
Trigger: GAACGTGTGTGGGCCTTGGCACAGGAGAAGGCGGCT...CTTCCCTGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGCCTGTGCCCGGCGGATaGTCTCTCGCACTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: GGRIGLSRGAIMSRNPGKPVPGG*SLALPV
Trigger: TACAGGAAGTGCGAGAGAGCATCCGCCGGGCACAGG...CTTCCCTGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGTGTCACTGTCTTGGCTaGTCTCTGGGAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGCHCLG*SLGGRG
Trigger: ACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACA...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAACTGGGAGCAGGCCCCTaGCCGTGGTGGGCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQLGAGP*PWWAPK
Trigger: TTTAGGGGCCCACCACGGGCAGGGGCCTGCTCCCAG...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CTGGTTCCGAGCCTTGACCCATTCGTCAGCATCTCCCTCCTCTATGACCTCCAGGCCTGGAGTCGGGTTTaGCCCCCAGCCACGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LVPSLDPFVSISLLYDLQAWSRV*PPATVA
Trigger: TGCCACCGTGGCTGGGGGCCAAACCCGACTCCAGGC...CTGGAGGTCATAGAGGAGGGAGATGCTGACGAATGGGTCAAGGCTCGGAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp GGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCACACGGGCAGCTCGGCTaGTCAAGCGCTGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GGGGRIGLSRGAIMSRNPHGQLG*SSAEPL
Trigger: AAGAGGTTCAGCGCTTGACCAGCCGAGCTGCCCGTG...TGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGGTGAGGGGATCTGGGTaGCCAGGATCCGGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: GGRIGLSRGAIMSRNPGKVRGSG*PGSGAL
Trigger: TAAAGCCCCGGATCCTGGCCACCCAGATCCCCTCAC...CTTCCCTGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ACGGCCCCCAAATTCTCCCCTCCAGAAGCCGTCATCTACTCCATCTTGGGCCCGCCCTGGCATCCAGAGTaGGGTGGGTCATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TAPKFSPPEAVIYSILGPPWHPE*GGSWSQ
Trigger: CTGGCTCCATGACCCACCCCACTCTGGATGCCAGGG...CGGGCCCAAGATGGAGTAGATGACGGCTTCTGGAGGGGAGAATTTGGGGGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAAAGCTGCTTCGCATCCTaGCTCCAGCTCCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: RGRWWTHRPESRCHHVQESCFAS*LQLLIP
Trigger: GGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCT...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR CAA 72 bp TGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTaGGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: CCGLCPAGIVTV*AALWEGEVREV
Trigger: AACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR TCA 90 bp GGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGCTGGTTCCGAGCCTTaGCCCATTCGTCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: GGGGRIGLSRGAIMSRNPAGSEP*PIRQHL
Trigger: GAGATGCTGACGAATGGGTCAAGGCTCGGAACCAGC...TGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTGGGGCAGCAGACGGATaGGTGCCCCCTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGGAADG*VPPQGS
Trigger: GCTTCCCTGAGGGGGCACTCATCCGTCTGCTGCCCC...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATGGACTGCACGAACACCGTGATGGCTCCCCCACAGACAGGAGCTGGGGCTCTGCTCCCAGGTTCCGGGTaGCACACATTGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: MDCTNTVMAPPQTGAGALLPGSG*HTLRSA
Trigger: AGCGCTTCTCAATGTGTGTCACCCGGAACCTGGGAG...CAGAGCCCCAGCTCCTGTCTGTGGGGGAGCCATCACGGTGTTCGTGCAGTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp CGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAAGTACTCATTGCGGGCTaGTTGCAGCTGCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RGRWWTHRPESRCHHVQEVLIAG*LQLLGV
Trigger: TACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTAC...TTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TTGAAGATAGGGACAGCAGCATCACTGGGGGTCAAGGCTTCCCTGGCCTTCAGGTCCCCGCGGTGGGCATaGTCCAGGATGACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LKIGTAASLGVKASLAFRSPRWA*SRMTSA
Trigger: CGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGA...CCTGAAGGCCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGGCCTGTGCCAGGAATaGTGTGGGCTCTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQGLCQE*CGLCPA
Trigger: TGCGGGGCAGAGCCCACAGCATTCCTGGCACAGGCC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGCCTGGAGTCGGGTTTaGCCCCCAGCCACGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRAWSRV*PPATVA
Trigger: TGCCACCGTGGCTGGGGGCCAAACCCGACTCCAGGC...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATGGACTGCACGAACACCGTGATGGCTCCCCCACAGACAGGAGCTGGGGCTCTGTCAGCCTGCGCCCTCTaGAGGTTCTCTGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: MDCTNTVMAPPQTGAGALSACAL*RFSVPF
Trigger: GAAGGGAACAGAGAACCTCCAGAGGGCGCAGGCTGA...CAGAGCCCCAGCTCCTGTCTGTGGGGGAGCCATCACGGTGTTCGTGCAGTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CAGGGAAGCTCAGCTCCTCTGCACTCTGTCCGGTGTAGCTGTACAGGGCCTGTGGAGTACTGGGCTGACTaGGCGGACAGCTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QGSSAPLHSVRCSCTGPVEYWAD*ADSLVL
Trigger: GAGCACCAAGCTGTCCGCCCAGTCAGCCCAGTACTC...CACAGGCCCTGTACAGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp ACGGCCCCCAAATTCTCCCCTCCAGAAGCCGTCATCTACTCCATCTTGGGCCCGGCTGCTTGCAGCTGCTaGGAGTACTGGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: TAPKFSPPEAVIYSILGPAACSC*EYWADW
Trigger: CCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGC...CGGGCCCAAGATGGAGTAGATGACGGCTTCTGGAGGGGAGAATTTGGGGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp ACGGCCCCCAAATTCTCCCCTCCAGAAGCCGTCATCTACTCCATCTTGGGCCCGGTGAGGGGATCTGGGTaGCCAGGATCCGGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: TAPKFSPPEAVIYSILGPVRGSG*PGSGAL
Trigger: TAAAGCCCCGGATCCTGGCCACCCAGATCCCCTCAC...CGGGCCCAAGATGGAGTAGATGACGGCTTCTGGAGGGGAGAATTTGGGGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp AATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCTGGGGGGTCAAGGCTTCCCTaGCCTTCAGGTGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: NAVGSAPQGLSLSWLLSGGSRLP*PSGEGI
Trigger: GATCCCCTCACCTGAAGGCCAGGGAAGCCTTGACCC...CCCAGAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAAAGAGGCCCAGGCCCTaGCCTGGCCTTCGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQKRPRP*PGLRAL
Trigger: AAGGGCACGAAGGCCAGGCCAGGGCCTGGGCCTCTT...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCGGCAGGGCCAGGGGGTaGGTGGGCGTGAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VNKSAQTITAASHPGSSSGRARG*VGVKAL
Trigger: GAGGGCTTTCACGCCCACCCACCCCCTGGCCCTGCC...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp CAGGAATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCGCCACTCACCCTCCGTaGTTGTCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: QECCGLCPAGIVTVLAALATHPP*LSAHPH
Trigger: GTGAGGATGAGCTGACAATCACGGAGGGTGAGTGGC...GAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp ACAAAGCCTACCTCGCCGTGCTGGTTCCGAGCCTTGACCCATTCGTCAGCATCTCCCTTCCTAAGCACCTaGTCCTTGGCGCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: TKPTSPCWFRALTHSSASPFLST*SLALRP
Trigger: AGGGCGGAGCGCCAAGGAGCAGGTGCTTAGGAAGGG...AGATGCTGACGAATGGGTCAAGGCTCGGAACCAGCACGGCGAGGTAGGCTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp TTGAAGATAGGGACAGCAGCATCACTGGGGGTCAAGGCTTCCCTGGCCTTCAGGCCCTTCCTAAGCACCTaGTCCTTGGCGCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LKIGTAASLGVKASLAFRPFLST*SLALRP
Trigger: AGGGCGGAGCGCCAAGGAGCAGGTGCTTAGGAAGGG...CCTGAAGGCCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ATGGACTGCACGAACACCGTGATGGCTCCCCCACAGACAGGAGCTGGGGCTCTGCACACACGTTCCCGCTaGCCATACAGCTTCCGACTT +
Preference number: 4 (lower is better)
Translates to: MDCTNTVMAPPQTGAGALHTRSR*PYSFRL
Trigger: AAGTCGGAAGCTGTATGGGCAGCGGGAACGTGTGTG...CAGAGCCCCAGCTCCTGTCTGTGGGGGAGCCATCACGGTGTTCGTGCAGTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp CGAGCCTTGACCCATTCGTCAGCATCTCCCTCCTCTATGACCTCCAGCCACTCACGGGCTGCTTGCAGCTaGTGGGAGTACTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RALTHSSASPSSMTSSHSRAACS*WEYWAD
Trigger: GTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCG...TGAGTGGCTGGAGGTCATAGAGGAGGGAGATGCTGACGAATGGGTCAAGGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGGCCTGTGCCAGGAATaGTGTGGGCTCTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRGLCQE*CGLCPA
Trigger: TGCGGGGCAGAGCCCACAGCATTCCTGGCACAGGCC...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTGGCCTGTGCCAGGAATaGTGTGGGCTCTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGGLCQE*CGLCPA
Trigger: TGCGGGGCAGAGCCCACAGCATTCCTGGCACAGGCC...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTCCCAGGCAGGACAGGTaGAGGGGGCCCATCCAACAC +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGPRQDR*RGPIQH
Trigger: GTGTTGGATGGGCCCCCTGCACCTGTCCTGCCTGGG...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522783.5
CDS-3UTR CCA 90 bp ATCTGGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATTTGGCTGTGTTGCTCTaGATCATTGATGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IWVARIRGFSRRGRWWTHLAVLL*IIDGVV
Trigger: GACCACACCATCAATGATCCAGAGCAACACAGCCAA...ATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
3UTR CAA 72 bp CTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTaGTCCGTCAGGGACGCTCCAAGGAAGGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LASIAAAARGLH*SVRDAPRKEKA
Trigger: GGCTTTTTCCTTCCTTGGAGCGTCCCTGACGGACAAGTGGAGGCCTCTTGCTGCGGCTGCAATGGAGGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CAA 72 bp TCTTGGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTaGAGATATCGCTCAGGGACAAAGCCTACCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SWLLSGRERSGK*RYRSGTKPTSP
Trigger: CGGCGAGGTAGGCTTTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR TCA 90 bp GGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAAGAGGTCCGGGAAGTTaGGATATCGCTCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: GGGGRIGLSRGAIMSRNPRGPGS*DIAQGQ
Trigger: TTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCT...TGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGTGGACGCATCGGCCTaGGTCGAGGTGCCATCATGT +
Preference number: 4 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQVDASA*VEVPSC
Trigger: ACATGATGGCACCTCGACTCAGGCCGATGCGTCCAC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CAGGGAAGCTCAGCTCCTCTGCACTCTGTCCGGTGTAGCTGTACAGGGCCTGTGGCCAGGTCTGAAGGATaGTCAGCTGTTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QGSSAPLHSVRCSCTGPVARSEG*SAVPGS
Trigger: GCTTCCTGGAACAGCTGAGCATCCTTCAGACCTGGC...CACAGGCCCTGTACAGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp AATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCTGGGATCTCACCGCTCCGGTaGCCTTCCCTCTTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NAVGSAPQGLSLSWLLSGISPLR*PSLFRN
Trigger: ATTCCTGAAGAGGGAAGGGCACCGGAGCGGTGAGAT...CCCAGAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp ACGGCCCCCAAATTCTCCCCTCCAGAAGCCGTCATCTACTCCATCTTGGGCCCGCACACACGTTCCCGCTaGCCATACAGCTTCCGACTT +
Preference number: 4 (lower is better)
Translates to: TAPKFSPPEAVIYSILGPHTRSR*PYSFRL
Trigger: AAGTCGGAAGCTGTATGGGCAGCGGGAACGTGTGTG...CGGGCCCAAGATGGAGTAGATGACGGCTTCTGGAGGGGAGAATTTGGGGGCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTCGGGCTGCTTGCAGCTaGTGGGAGTACTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGRAACS*WEYWAD
Trigger: GTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCG...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGAACAGCTTCAGGTCTTaGTCCCAGCTTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGRIGLSRGAIMSRNPGKNSFRS*SQLTWE
Trigger: CTCCCAGGTAAGCTGGGAGCAAGACCTGAAGCTGTT...CTTCCCTGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAAACAGCTTCAGGTCTTaGTCCCAGCTTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGGGRIGLSRGAIMSRNPNSFRS*SQLTWE
Trigger: CTCCCAGGTAAGCTGGGAGCAAGACCTGAAGCTGTT...TGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCGCCTGCTGCCGCCTCTaGTCCAGTCGTTGCAGTACC +
Preference number: 4 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSACCRL*SSRCST
Trigger: GGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGC...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTGCGAAATACCACGTGTaGAGGGCAGGGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGAKYHV*RAGEGP
Trigger: AGGGCCCTCCCCTGCCCTGCACACGTGGTATTTCGC...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCGCCCCTTGCCTCCATTaGAGCCGCAGCAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSAPCLH*SRSKRP
Trigger: AGGCCTCTTGCTGCGGCTGCAATGGAGGCAAGGGGC...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp CTGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTGAGAAGGCACTCCCCTCCTCCCTaGTGTCCAGTGTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LGAPAEVRLHNVPHNLRRHSPPP*CPVWMP
Trigger: TGGCATCCACACTGGACAGCAGGGAGGAGGGGAGTG...CCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp TTGAAGATAGGGACAGCAGCATCACTGGGGGTCAAGGCTTCCCTGGCCTTCAGGTGCTCCCAGCTTACCTaGGAGGTTGTCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LKIGTAASLGVKASLAFRCSQLT*EVVCSP
Trigger: CGGGGAGCAGACAACCTCCCAGGTAAGCTGGGAGCA...CCTGAAGGCCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGGCCTGGGTCATGGCTaGCTTCAGCCAGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPGLGHG*LQPALH
Trigger: GTGGAGCGCTGGCTGAAGCCAGCCATGACCCAGGCC...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CCA 90 bp TGGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTTGAGATATCGCTCAGGGACAAGCATCCTCAGCGGTTaGAGAGAGGTCCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: WLLSGRERSGKLRYRSGTSILSG*REVPLG
Trigger: TCCCAGAGGGACCTCTCTCCAACCGCTGAGGATGCT...TGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp CTGGTTCCGAGCCTTGACCCATTCGTCAGCATCTCCCTCCTCTATGACCTCCAGGTCTTGGCTGCTCTCTaGGAGGGAGAGGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LVPSLDPFVSISLLYDLQVLAAL*EGEVRE
Trigger: TTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGAC...CTGGAGGTCATAGAGGAGGGAGATGCTGACGAATGGGTCAAGGCTCGGAACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTGAGTTCAGGTGGCCCTaGGGGGCCAAGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGEFRWP*GAKQLF
Trigger: GAAGAGCTGCTTGGCCCCCCAGGGCCACCTGAACTC...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCACGGCGGGGGAGGTGGTaGACGCATCGGCCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAARRGRW*THRPES
Trigger: CGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCG...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp AGCCCAACCCCAGTGACCCTGGCATCCAGAGTGGGGTGGGTCATGGAGCCAGGGAGAGACCTTGATGGATaGTTTCCAGCCCCAGAGATT +
Preference number: 4 (lower is better)
Translates to: SPTPVTLASRVGWVMEPGRDLDG*FPAPEI
Trigger: AATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCT...CCCTGGCTCCATGACCCACCCCACTCTGGATGCCAGGGTCACTGGGGTTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGTCATGGAGCCAGGGTaGGGAAAGAGGTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQVMEPG*GKRWAR
Trigger: TCTGGCCCACCTCTTTCCCCACCCTGGCTCCATGAC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGGGCCCCTGCCCGTGGTaGGCCCCTAAAGCAATAGCA +
Preference number: 4 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRGPCPW*APKAIA
Trigger: TGCTATTGCTTTAGGGGCCCACCACGGGCAGGGGCC...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCAACAGCCGAGCCTCACTaGGCCGCCGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAATAEPH*AAAPAP
Trigger: TGGAGCAGGAGCGGCGGCTCAGTGAGGCTCGGCTGT...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATACCTGGGAGGTTGTCTaGTCCCCGCGGTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDTWEVV*SPRWAC
Trigger: GCATGCCCACCGCGGGGAGCAGACAACCTCCCAGGT...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTTCTCCAGGCCACTCTTaGCAGCCACGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGSPGHS*QPRLLL
Trigger: GAGCAGAAGGCGTGGCTGGCAAGAGTGGCCTGGAGA...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGCCTGCTGCCGCCTCTaGTCCAGTCGTTGCAGTACC +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPACCRL*SSRCST
Trigger: GGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGC...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCCTGTGCCCGGCGGATaGTCTCTCGCACTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSPVPGG*SLALPV
Trigger: TACAGGAAGTGCGAGAGAGCATCCGCCGGGCACAGG...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGCTGAGCCGCCGCTCCTaGTCCACCTCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMLSRRS*STSSWA
Trigger: GGCCCAGGATGAGGTGGAGCAGGAGCGGCGGCTCAG...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAGCAGACGGATGAGTaGCCCCTCAGGGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSQQTDE*PLREAQ
Trigger: CTGAGCTTCCCTGAGGGGGCACTCATCCGTCTGCTG...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGGCCTGGAGTCGGGTTTaGCCCCCAGCCACGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMAWSRV*PPATVA
Trigger: TGCCACCGTGGCTGGGGGCCAAACCCGACTCCAGGC...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGCGGTTTAGCCTGGCCTaGACATCAGCCGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRRFSLA*TSAAFS
Trigger: GGAGAAGGCGGCTGATGTCCAGGCCAGGCTAAACCG...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAACACTTCGGTTTAGCCTaGCCTGGACATCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQHFGLA*PGHQPP
Trigger: AGGCGGCTGATGTCCAGGCCAGGCTAAACCGAAGTG...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TGGCTGCTCTCTGGGAGGGAGAGGTCCGGGAAGTTGAGATATCGCTCAGGGACAACTGGGCGGACAGCTTaGTGCTCAGTTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: WLLSGRERSGKLRYRSGTTGRTA*CSVSGD
Trigger: GTCTCCAGAAACTGAGCACCAAGCTGTCCGCCCAGT...TGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTCCCTCCCAGAGAGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTCACGGGCAGCTCGGCTaGTCAAGCGCTGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGHGQLG*SSAEPL
Trigger: AAGAGGTTCAGCGCTTGACCAGCCGAGCTGCCCGTG...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCGGGTCAAGGCTTCCCTaGCCTTCAGGTGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSGSRLP*PSGEGI
Trigger: GATCCCCTCACCTGAAGGCCAGGGAAGCCTTGACCC...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGCCCAGGCCCTGGCCTaGCCTTCGTGCCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPAQALA*PSCPLF
Trigger: GAATAAAGGGCACGAAGGCCAGGCCAGGGCCTGGGC...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCACAGGGATGCCTGCCATaGAGAGGCTGCCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPQGCLP*RGCPLR
Trigger: TCTCAGGGGGCAGCCTCTCCATGGCAGGCATCCCTG...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CTGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTGAGAAGGTTGGCTCTTTCCTCCTaGACTGGGAGCTCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGAPAEVRLHNVPHNLRRLALSS*TGSSGR
Trigger: TCTGCCGGAGCTCCCAGTCCAGGAGGAAAGAGCCAA...CCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCTCTGCTGCCAGGTCTaGAGGATGCTCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSLCCQV*RMLSCS
Trigger: GGAACAGCTGAGCATCCTTCAGACCTGGCAGCAGAG...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCATCTCCCTCCTCTATaGCCTCCAGCCACTCACCCT +
Preference number: 4 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSHLPPL*PPATHP
Trigger: AGGGTGAGTGGCTGGAGGTCATAGAGGAGGGAGATG...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ACGGCCCCCAAATTCTCCCCTCCAGAAGCCGTCATCTACTCCATCTTGGGCCCGGTTGCTCTGGATCATTaGTGGTGTGGTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: TAPKFSPPEAVIYSILGPVALDH*WCGLTA
Trigger: AGCTGTCAGACCACACCATCAATGATCCAGAGCAAC...CGGGCCCAAGATGGAGTAGATGACGGCTTCTGGAGGGGAGAATTTGGGGGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR TCA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCACTGCACGAACACCGTaGTGGCTCCCCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: VNKSAQTITAASHPGSSSTARTP*WLPHRQ
Trigger: CTGTCTGTGGGGGAGCCATCACGGTGTTCGTGCAGT...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGGGCGGACAGCTTGGTaGTCAGTTTCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRGRTAW*SVSGDW
Trigger: CCAGTCTCCAGAAACTGAGCACCAAGCTGTCCGCCC...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTAGGGGGTCCCTCAAGTaGTCTGACAGCTCACTGACC +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGRGSLK*SDSSLT
Trigger: GGTCAGTGAGCTGTCAGAGCACTTGAGGGACCCCCT...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCTCCAGGATGACCTCTaGGGCTTCCAGCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSLQDDL*GFQLSV
Trigger: CACACTGAGCTGGAAGCCGCAGAGGTCATCCTGGAG...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGCTCTGCTCCAGTCGTTaGAGTACCCGATGCCCATGG +
Preference number: 4 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRLCSSR*STRCPW
Trigger: CCATGGGCATCGGGTACTGCAACGACTGGAGCAGAG...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCACCCAGGCAGGACAGGTaGAGGGGGCCCATCCAACAC +
Preference number: 4 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAAPRQDR*RGPIQH
Trigger: GTGTTGGATGGGCCCCCTGCACCTGTCCTGCCTGGG...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522783.5
CDS-3UTR GCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGCTGCCATGGAGAGGCTaGCCCCTGAGAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMLPWRG*PLRGHS
Trigger: GCTGTGGCCTCTCAGGGGGCAGCCTCTCCATGGCAG...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTAAGGCGGTCAGCCACTaGACTCCGGAACTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGKAVSH*TPELEE
Trigger: TTCCTCCAGTTCCGGAGTCCAGTGGCTGACCGCCTT...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTCGAAGCTTCACCTCCTaGGCCGGCTTCACTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGRSFTS*AGFTFR
Trigger: CCGAAAAGTGAAGCCGGCCCAGGAGGTGAAGCTTCG...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522783.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGCCCCCAGCCACGGTaGCATCCAGCAGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIGPQPR*HPAGSA
Trigger: GGCGCTGCCTGCTGGATGCCACCGTGGCTGGGGGCC...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCATATCGGTCAGACGCCTaGAGTCGGGTTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPYRSDA*SRVWPP
Trigger: TGGGGGCCAAACCCGACTCCAGGCGTCTGACCGATA...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CTGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTGAGAAGGACTGGGCGGACAGCTTaGTGCTCAGTTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LGAPAEVRLHNVPHNLRRTGRTA*CSVSGD
Trigger: GTCTCCAGAAACTGAGCACCAAGCTGTCCGCCCAGT...CCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCGTCTTGGCTGCTCTCTaGGAGGGAGAGGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: VNKSAQTITAASHPGSSSVLAAL*EGEVRE
Trigger: TTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGAC...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGTGCCAGGAATGCTGTaGGCTCTGCCCCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDVPGML*ALPRRD
Trigger: ATCCCTGCGGGGCAGAGCCCACAGCATTCCTGGCAC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACACGGCGGGGGAGGTGGTaGACGCATCGGCCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITRRGRW*THRPES
Trigger: CGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCG...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGGACAGCAGCATCACTaGGGGTCAAGGCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPGQQHH*GSRLPW
Trigger: CCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCC...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATCCCTGGCATCCAGAGTaGGGTGGGTCATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDPWHPE*GGSWSQ
Trigger: CTGGCTCCATGACCCACCCCACTCTGGATGCCAGGG...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTCCCTGGCATCCAGAGTaGGGTGGGTCATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SINPLRPLQLLRILAPAPPWHPE*GGSWSQ
Trigger: CTGGCTCCATGACCCACCCCACTCTGGATGCCAGGG...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGCTGGGAGTACTGGGCTaGCTGGGCGGACAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMLGVLG*LGGQLG
Trigger: ACCAAGCTGTCCGCCCAGTCAGCCCAGTACTCCCAG...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp CAGGAATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCAATACACCAGGCTCCTaGAGAAACAGCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QECCGLCPAGIVTVLAALNTPGS*RNSFRS
Trigger: AGACCTGAAGCTGTTTCTTCAGGAGCCTGGTGTATT...GAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR TCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCAACAGCCGAGCCTCACTaGGCCGCCGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISTAEPH*AAAPAP
Trigger: TGGAGCAGGAGCGGCGGCTCAGTGAGGCTCGGCTGT...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR TCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGGGGCAGCAGACGGATaGGTGCCCCCTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRGAADG*VPPQGS
Trigger: GCTTCCCTGAGGGGGCACTCATCCGTCTGCTGCCCC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGTGGACGCATCGGCCTaGGTCGAGGTGCCATCATGT +
Preference number: 4 (lower is better)
Translates to: SINPLRPLQLLRILAPAPVDASA*VEVPSC
Trigger: ACATGATGGCACCTCGACTCAGGCCGATGCGTCCAC...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGAGAGGCTGCCCCCTaGGAGGCCACAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIGEAAP*EATAPG
Trigger: ACCTGGGGCTGTGGCCTCTCAGGGGGCAGCCTCTCC...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTACAGCCGAGCCTCACTaGGCCGCCGCTCCCGATGCC +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVTAEPH*AAAPDA
Trigger: GGCATCGGGAGCGGCGGCTCAGTGAGGCTCGGCTGT...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522783.5
CDS-3UTR GCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTATTTCGGGGCGGCGGCTaGATCTCCGCTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLFRGGG*ISAPAR
Trigger: CCTTGCTGGAGCGGAGATGCAGCCGCCGCCCCGAAA...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTATCTCACCGCTCCGGTaGCCTTCCCTCTTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGISPLR*PSLFRN
Trigger: ATTCCTGAAGAGGGAAGGGCACCGGAGCGGTGAGAT...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGCCCTTCCTAAGCACCTaGTCCTTGGCGCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMPFLST*SLALRP
Trigger: AGGGCGGAGCGCCAAGGAGCAGGTGCTTAGGAAGGG...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACATCTAAGCCAGCCCCCTaGAGCAGGGCCAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITSKPAP*SRASRA
Trigger: TGCCCGGCTGGCCCTGCTGCAGGGGGCTGGCTTAGA...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGCGAAATACCACGTGTaGAGGGCAGGGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WARTTRDLDGWFPAPEISAKYHV*RAGEGP
Trigger: AGGGCCCTCCCCTGCCCTGCACACGTGGTATTTCGC...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGCTGTACAGGGCCTGTaGCAGGAATGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SINPLRPLQLLRILAPAPAVQGL*QECCGL
Trigger: GAGCCCACAGCATTCCTGGCACAGGCCCTGTACAGC...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAACTTCCACCTGGAGTTaGACAGTCTCAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPTSTWS*TVSGWG
Trigger: CCCCCAGCCTGAGACTGTGCAACTCCAGGTGGAAGT...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGCCCAAGCCCAGGGCTaGCCACTCAAGAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SINPLRPLQLLRILAPAPAQAQG*PLKRQM
Trigger: CATTTGCCTCTTGAGTGGGCAGCCCTGGGCTTGGGC...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCCGAAGCTTCACCTCCTaGGCCGGCTTCACTTTTCGG +
Preference number: 4 (lower is better)
Translates to: VNKSAQTITAASHPGSSSRSFTS*AGFTFR
Trigger: CCGAAAAGTGAAGCCGGCCCAGGAGGTGAAGCTTCG...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522783.5
CDS-3UTR CCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTCGGTTTAGCCTGGCCTaGACATCAGCCGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SINPLRPLQLLRILAPAPRFSLA*TSAAFS
Trigger: GGAGAAGGCGGCTGATGTCCAGGCCAGGCTAAACCG...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGCTGCTTGCAGCTGCTaGGAGTACTGGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDAACSC*EYWADW
Trigger: CCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGTCTGCTCCCCGCGGTaGGCATGCTCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTVCSPR*ACSRMT
Trigger: GGTCATCCTGGAGCATGCCCACCGCGGGGAGCAGAC...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGGTGCCAGGAATGCTGTaGGCTCTGCCCCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMVPGML*ALPRRD
Trigger: ATCCCTGCGGGGCAGAGCCCACAGCATTCCTGGCAC...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCATCTACTCCATCTTaGGCCCGGGGCAGCAGACGG +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDSSTPS*ARGSRR
Trigger: CCGTCTGCTGCCCCGGGCCCAAGATGGAGTAGATGA...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CAGGAATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCAGAGACCTTGATGGATaGTTTCCAGCCCCAGAGATT +
Preference number: 4 (lower is better)
Translates to: QECCGLCPAGIVTVLAALRDLDG*FPAPEI
Trigger: AATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCT...GAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAAGCTGCTTCGCATCCTaGCTCCAGCTCCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPSCFAS*LQLLIP
Trigger: GGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCT...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATCTCTGCTGCCAGGTCTaGAGGATGCTCAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDLCCQV*RMLSCS
Trigger: GGAACAGCTGAGCATCCTTCAGACCTGGCAGCAGAG...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGTCCCTCAAGTGCTCTaGCAGCTCACTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: WARTTRDLDGWFPAPEISVPQVL*QLTDQG
Trigger: GCCCTGGTCAGTGAGCTGTCAGAGCACTTGAGGGAC...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAATGGAGCCTCCCGCTCTaGAGCCTGCTGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIEWSLPL*SLLPPL
Trigger: CAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCA...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR TCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATATGGAGCCTCCCGCTCTaGAGCCTGCTGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIWSLPL*SLLPPL
Trigger: CAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCA...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR TCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATCATCTCCCTCCTCTATaGCCTCCAGCCACTCACCCT +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDHLPPL*PPATHP
Trigger: AGGGTGAGTGGCTGGAGGTCATAGAGGAGGGAGATG...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCACCGGGTGACACACATTaGGAAGCGCTATGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPPGDTH*EALWTA
Trigger: TGCAGTCCATAGCGCTTCTCAATGTGTGTCACCCGG...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCAGGGCCAAGCAGCCTCTaGGTTGTGGTCCTAAACCCC +
Preference number: 4 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAAGPSSL*VVVLNP
Trigger: GGGGTTTAGGACCACAACTCAGAGGCTGCTTGGCCC...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGCCAGGTCTGAAGGATaGTCAGCTGTTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPARSEG*SAVPGS
Trigger: GCTTCCTGGAACAGCTGAGCATCCTTCAGACCTGGC...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCGTACTCATTGCGGGCTaGTTGCAGCTGCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: VNKSAQTITAASHPGSSSVLIAG*LQLLGV
Trigger: TACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTAC...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAAAGCCTACCTCGCCGTaGTGGTTCCGAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: WARTTRDLDGWFPAPEISKPTSP*WFRALT
Trigger: GGTCAAGGCTCGGAACCAGCACGGCGAGGTAGGCTT...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGAATGCTGTGGGCTCTaGCCCGCAGGGATTGTCACT +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDECCGL*PAGIVT
Trigger: AGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGTCAGACCATTACAGCTaGTTCGCATCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRSDHYS*FASWLQ
Trigger: CTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGA...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACACTGCCTGCAACAGGCTaGCTGCCCCGCCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITLPATG*LPRLPQ
Trigger: TTGGGGAAGGCGGGGCAGGCAGCCTGTTGCAGGCAG...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGCATACTCCCGTTCAATaGCTGCCCTCTGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRHTPVQ*LPSACC
Trigger: ACAGCAAGCAGAGGGCAGCCATTGAACGGGAGTATG...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp TTGAAGATAGGGACAGCAGCATCACTGGGGGTCAAGGCTTCCCTGGCCTTCAGGTCAGTTTCTGGAGACTaGTCCGAGAGTGGAAGATCC +
Preference number: 4 (lower is better)
Translates to: LKIGTAASLGVKASLAFRSVSGD*SESGRS
Trigger: GGATCTTCCACTCTCGGACCAGTCTCCAGAAACTGA...CCTGAAGGCCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAAGCTGCTGGGAGTACTaGGCTGACTGGGCGGACAGC +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLSCWEY*ADWADS
Trigger: GCTGTCCGCCCAGTCAGCCCAGTACTCCCAGCAGCT...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCAGCTGCTTGCAGCTGCTaGGAGTACTGGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAAAACSC*EYWADW
Trigger: CCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGC...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGGTCTTGGCTGCTCTCTaGGAGGGAGAGGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMVLAAL*EGEVRE
Trigger: TTCCCGGACCTCTCCCTCCCAGAGAGCAGCCAAGAC...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GAAACAAAACATGAAGGGAAATGGAAATGTTACCCTCACTCCCCTCCTCCCTGCGAGTTCAGGTGGCCCTaGGGGGCCAAGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ETKHEGKWKCYPHSPPPCEFRWP*GAKQLF
Trigger: GAAGAGCTGCTTGGCCCCCCAGGGCCACCTGAACTC...GCAGGGAGGAGGGGAGTGAGGGTAACATTTCCATTTCCCTTCATGTTTTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACATCAGGTGAGGGGATCTaGGTGGCCAGGATCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITSGEGI*VARIRG
Trigger: GCCCCGGATCCTGGCCACCCAGATCCCCTCACCTGA...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGGGATCATTGATGGTGTaGTCTGACAGCTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: GGRIGLSRGAIMSRNPGKGSLMV*SDSLKI
Trigger: TATCTTCAAGCTGTCAGACCACACCATCAATGATCC...CTTCCCTGGGTTCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGTCATGGAGCCAGGGTaGGGAAAGAGGTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: WARTTRDLDGWFPAPEISVMEPG*GKRWAR
Trigger: TCTGGCCCACCTCTTTCCCCACCCTGGCTCCATGAC...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GAAACAAAACATGAAGGGAAATGGAAATGTTACCCTCACTCCCCTCCTCCCTGCGCAGGCCCCTGCCCGTaGTGGGCCCCTAAAGCAATA +
Preference number: 4 (lower is better)
Translates to: ETKHEGKWKCYPHSPPPCAGPCP*WAPKAI
Trigger: TATTGCTTTAGGGGCCCACCACGGGCAGGGGCCTGC...GCAGGGAGGAGGGGAGTGAGGGTAACATTTCCATTTCCCTTCATGTTTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCACCATATGATAGAGCGTaGCAGCTGGGAGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAAPYDRA*QLGAGP
Trigger: GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGG...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CAA 72 bp GGTGGGGAAAGAGGTGGGCCAGAACTACTAGAGACCTaGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GGERGGPELLET*MDGFQPQRFQA
Trigger: TGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp TTGAAGATAGGGACAGCAGCATCACTGGGGGTCAAGGCTTCCCTGGCCTTCAGGAATACACCAGGCTCCTaGAGAAACAGCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LKIGTAASLGVKASLAFRNTPGS*RNSFRS
Trigger: AGACCTGAAGCTGTTTCTTCAGGAGCCTGGTGTATT...CCTGAAGGCCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGGCCACTCACCCTCCGTaGTTGTCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMATHPP*LSAHPH
Trigger: GTGAGGATGAGCTGACAATCACGGAGGGTGAGTGGC...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATAGCCAGTTTCTGGAGTaGCTGCCCATACTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDSQFLE*LPILPF
Trigger: GAACGGGAGTATGGGCAGGCACTCCAGAAACTGGCT...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGAGGGGGTCCCTCAAGTaGTCTGACAGCTCACTGACC +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMRGSLK*SDSSLT
Trigger: GGTCAGTGAGCTGTCAGAGCACTTGAGGGACCCCCT...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCACTCCAGGATGACCTCTaGGGCTTCCAGCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAALQDDL*GFQLSV
Trigger: CACACTGAGCTGGAAGCCGCAGAGGTCATCCTGGAG...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTTCCCCGCGGTGGGCATaGTCCAGGATGACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVSPRWA*SRMTSA
Trigger: CGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGA...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCACCTGGGAGGTTGTCTaGTCCCCGCGGTGGGCATGC +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRITWEVV*SPRWAC
Trigger: GCATGCCCACCGCGGGGAGCAGACAACCTCCCAGGT...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTATCTCCAGGCCACTCTTaGCAGCCACGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLSPGHS*QPRLLL
Trigger: GAGCAGAAGGCGTGGCTGGCAAGAGTGGCCTGGAGA...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACATCTCCAGGCCACTCTTaGCAGCCACGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTSPGHS*QPRLLL
Trigger: GAGCAGAAGGCGTGGCTGGCAAGAGTGGCCTGGAGA...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACACCTGGCTCACCTGTaGCCGGCGGATGCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIEHLAHL*PADALS
Trigger: CGAGAGAGCATCCGCCGGGCACAGGTGAGCCAGGTG...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAACTGAGCCGCCGCTCCTaGTCCACCTCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKLSRRS*STSSWA
Trigger: GGCCCAGGATGAGGTGGAGCAGGAGCGGCGGCTCAG...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGCGAAATACCACGTGTaGAGGGCAGGGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRAKYHV*RAGEGP
Trigger: AGGGCCCTCCCCTGCCCTGCACACGTGGTATTTCGC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGCTGTACAGGGCCTGTaGCAGGAATGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLAVQGL*QECCGL
Trigger: GAGCCCACAGCATTCCTGGCACAGGCCCTGTACAGC...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGAAGCTCAGCTCCTCTaGACTCTGTCCGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: SINPLRPLQLLRILAPAPEAQLL*TLSGVA
Trigger: AGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTC...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTACGGCCTGAGTCGAGGTaGCATCATGTCCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLRPESR*HHVQEP
Trigger: GGGTTCCTGGACATGATGGCACCTCGACTCAGGCCG...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTCAGACCATTACAGCTaGTTCGCATCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VNKSAQTITAASHPGSSSSDHYS*FASWLQ
Trigger: CTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGA...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTTCTCCTTCCCCTGCCTaGAACAGGCTGCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVSPSPA*NRLPAP
Trigger: CGGGGCAGGCAGCCTGTTGCAGGCAGGGGAAGGAGA...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GAAACAAAACATGAAGGGAAATGGAAATGTTACCCTCACTCCCCTCCTCCCTGCGGGCCAGCCAGTTTCTaGAGTGCCTGCCCATACTCC +
Preference number: 4 (lower is better)
Translates to: ETKHEGKWKCYPHSPPPCGPASF*SACPYS
Trigger: GGAGTATGGGCAGGCACTCCAGAAACTGGCTGGCCC...GCAGGGAGGAGGGGAGTGAGGGTAACATTTCCATTTCCCTTCATGTTTTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGCACTTCGGTTTAGCCTaGCCTGGACATCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMHFGLA*PGHQPP
Trigger: AGGCGGCTGATGTCCAGGCCAGGCTAAACCGAAGTG...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGTCAGTTTCTGGAGACTaGTCCGAGAGTGGAAGATCC +
Preference number: 4 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRSVSGD*SESGRS
Trigger: GGATCTTCCACTCTCGGACCAGTCTCCAGAAACTGA...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACACACGGGCAGCTCGGCTaGTCAAGCGCTGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTHGQLG*SSAEPL
Trigger: AAGAGGTTCAGCGCTTGACCAGCCGAGCTGCCCGTG...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGCCTGGGTCATGGCTaGCTTCAGCCAGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIGLGHG*LQPALH
Trigger: GTGGAGCGCTGGCTGAAGCCAGCCATGACCCAGGCC...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCCTGGGCCTGGGTCATaGCTGGCTTCAGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRIPGPGS*LASASA
Trigger: AGCGCTGGCTGAAGCCAGCCATGACCCAGGCCCAGG...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATACCTGGGCCTGGGTCATaGCTGGCTTCAGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIPGPGS*LASASA
Trigger: AGCGCTGGCTGAAGCCAGCCATGACCCAGGCCCAGG...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTTCAGGTGAGGGGATCTaGGTGGCCAGGATCCGGGGC +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVSGEGI*VARIRG
Trigger: GCCCCGGATCCTGGCCACCCAGATCCCCTCACCTGA...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGTCATGGAGCCAGGGTaGGGAAAGAGGTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTVMEPG*GKRWAR
Trigger: TCTGGCCCACCTCTTTCCCCACCCTGGCTCCATGAC...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAATAGAGCGTGGCAGCTaGGAGCAGGCCCCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIIERGS*EQAPAR
Trigger: ACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTAT...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGTATTGCTCTCTACTCTaGGGGGCACTGATAGGACCT +
Preference number: 4 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRYCSLL*GALIGP
Trigger: AGGTCCTATCAGTGCCCCCCAGAGTAGAGAGCAATA...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCCCACAGACAGGAGCTaGGGCTCTGGTGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRIPTDRS*GSGGGQ
Trigger: CTGTCCCCCACCAGAGCCCCAGCTCCTGTCTGTGGG...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAATCACACAGTGCACCTaGGCTCTGCAGCCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLITQCT*ALQPLA
Trigger: GGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGAT...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp GAAACAAAACATGAAGGGAAATGGAAATGTTACCCTCACTCCCCTCCTCCCTGCGCTGGTTCCGAGCCTTaGCCCATTCGTCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: ETKHEGKWKCYPHSPPPCAGSEP*PIRQHL
Trigger: GAGATGCTGACGAATGGGTCAAGGCTCGGAACCAGC...GCAGGGAGGAGGGGAGTGAGGGTAACATTTCCATTTCCCTTCATGTTTTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTATTGATGGTGTGGTCTaGCAGCTTGAAGATAGGGAC +
Preference number: 4 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGIDGVV*QLEDRD
Trigger: GTCCCTATCTTCAAGCTGTCAGACCACACCATCAAT...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCAGCCGCCTTCTCCTGTaGCAAGGCCCACACACGTTC +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRSRLLL*QGPHTF
Trigger: GAACGTGTGTGGGCCTTGGCACAGGAGAAGGCGGCT...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAATCCCCGCGGTGGGCATaGTCCAGGATGACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKSPRWA*SRMTSA
Trigger: CGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGA...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATAACAGCTTCAGGTCTTaGTCCCAGCTTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDNSFRS*SQLTWE
Trigger: CTCCCAGGTAAGCTGGGAGCAAGACCTGAAGCTGTT...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATACGCTCTGAAGCCTGCTaGCGCCTCTGCTCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIRSEAC*RLCSSR
Trigger: ACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCG...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCGCTCTGAAGCCTGCTaGCGCCTCTGCTCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRIRSEAC*RLCSSR
Trigger: ACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCG...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATGTAACCTCTGTTCTATaGTTGGAGCCTCCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDVTSVL*LEPPAL
Trigger: CAGAGCGGGAGGCTCCAAGCATAGAACAGAGGTTAC...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAAAGCCTACCTCGCCGTaGTGGTTCCGAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITKPTSP*WFRALT
Trigger: GGTCAAGGCTCGGAACCAGCACGGCGAGGTAGGCTT...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCATGTCACTGTCTTGGCTaGTCTCTGGGAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WARTTRDLDGWFPAPEISCHCLG*SLGGRG
Trigger: ACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACA...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAATGCTGTGGGCTCTaGCCCGCAGGGATTGTCACT +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLECCGL*PAGIVT
Trigger: AGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTC...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCAGCTGTACAGGGCCTGTaGCAGGAATGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISAVQGL*QECCGL
Trigger: GAGCCCACAGCATTCCTGGCACAGGCCCTGTACAGC...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ACAAAGCCTACCTCGCCGTGCTGGTTCCGAGCCTTGACCCATTCGTCAGCATCTAGCTTTTGGCTGTGTTaGTCTGGATCATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: TKPTSPCWFRALTHSSASSFWLC*SGSLMV
Trigger: CACCATCAATGATCCAGAGCAACACAGCCAAAAGCT...AGATGCTGACGAATGGGTCAAGGCTCGGAACCAGCACGGCGAGGTAGGCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp TTGAAGATAGGGACAGCAGCATCACTGGGGGTCAAGGCTTCCCTGGCCTTCAGGAGCTTTTGGCTGTGTTaGTCTGGATCATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: LKIGTAASLGVKASLAFRSFWLC*SGSLMV
Trigger: CACCATCAATGATCCAGAGCAACACAGCCAAAAGCT...CCTGAAGGCCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAAGCCCAAGGCAGGGATaGCTGCCATGGAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKISPRQG*LPWRGC
Trigger: GCAGCCTCTCCATGGCAGGCATCCCTGCCTTGGGCT...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTATCAGCCTGCGCCCTCTaGAGGTTCTCTGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLSACAL*RFSVPF
Trigger: GAAGGGAACAGAGAACCTCCAGAGGGCGCAGGCTGA...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTACACTTCGGTTTAGCCTaGCCTGGACATCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLHFGLA*PGHQPP
Trigger: AGGCGGCTGATGTCCAGGCCAGGCTAAACCGAAGTG...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGTGGAAGATCCCATaGTCACTTCGGTTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPEWKIP*SLRFSL
Trigger: CAGGCTAAACCGAAGTGACCATGGGATCTTCCACTC...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAAGACTGGTCCGAGAGTaGAAGATCCCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPRLVRE*KIPWSL
Trigger: AAGTGACCATGGGATCTTCCACTCTCGGACCAGTCT...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGAGTACTGGGCTGACTaGGCGGACAGCTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLREYWAD*ADSLVL
Trigger: GAGCACCAAGCTGTCCGCCCAGTCAGCCCAGTACTC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAAGCTGCTGGGAGTACTaGGCTGACTGGGCGGACAGC +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKISCWEY*ADWADS
Trigger: GCTGTCCGCCCAGTCAGCCCAGTACTCCCAGCAGCT...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAAGGAGAGAGGTCCCTCTaGGACAGCCGAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIEGERSL*DSRASL
Trigger: CAGTGAGGCTCGGCTGTCCCAGAGGGACCTCTCTCC...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCATCATCTACTCCATCTTaGGCCCGGGGCAGCAGACGG +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISSSTPS*ARGSRR
Trigger: CCGTCTGCTGCCCCGGGCCCAAGATGGAGTAGATGA...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAAGCTGCTTCGCATCCTaGCTCCAGCTCCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTSCFAS*LQLLIP
Trigger: GGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCT...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGCCCAGGCCCTGGCCTaGCCTTCGTGCCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIAQALA*PSCPLF
Trigger: GAATAAAGGGCACGAAGGCCAGGCCAGGGCCTGGGC...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACACATCTCCCTCCTCTATaGCCTCCAGCCACTCACCCT +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITHLPPL*PPATHP
Trigger: AGGGTGAGTGGCTGGAGGTCATAGAGGAGGGAGATG...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGTGGACGCATCGGCCTaGGTCGAGGTGCCATCATGT +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIVDASA*VEVPSC
Trigger: ACATGATGGCACCTCGACTCAGGCCGATGCGTCCAC...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCATCTCCTTCATTGTGCTaGTGGACTACCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAASPSLC*WTTSWQ
Trigger: CTGCCAGCTGGTAGTCCATCAGCACAATGAAGGAGA...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAATCTCACCGCTCCGGTaGCCTTCCCTCTTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTISPLR*PSLFRN
Trigger: ATTCCTGAAGAGGGAAGGGCACCGGAGCGGTGAGAT...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCTGCAGCACCTCAGCCTaGGCCCTCTGGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRICSTSA*ALWRFS
Trigger: AGAGAACCTCCAGAGGGCGCAGGCTGAGGTGCTGCA...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTACACACACGTTCCCGCTaGCCATACAGCTTCCGACTT +
Preference number: 4 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLHTRSR*PYSFRL
Trigger: AAGTCGGAAGCTGTATGGGCAGCGGGAACGTGTGTG...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGGGCGGACAGCTTGGTaGTCAGTTTCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRGRTAW*SVSGDW
Trigger: CCAGTCTCCAGAAACTGAGCACCAAGCTGTCCGCCC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAAGGGGGTCCCTCAAGTaGTCTGACAGCTCACTGACC +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITRGSLK*SDSSLT
Trigger: GGTCAGTGAGCTGTCAGAGCACTTGAGGGACCCCCT...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGTAACCTCTGTTCTATaGTTGGAGCCTCCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: WARTTRDLDGWFPAPEISVTSVL*LEPPAL
Trigger: CAGAGCGGGAGGCTCCAAGCATAGAACAGAGGTTAC...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACATGTCACTGTCTTGGCTaGTCTCTGGGAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTCHCLG*SLGGRG
Trigger: ACCTCTCCCTCCCAGAGAGCAGCCAAGACAGTGACA...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCAGAATGCTGTGGGCTCTaGCCCGCAGGGATTGTCACT +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISECCGL*PAGIVT
Trigger: AGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTC...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAAGAGTACTGGGCTGACTaGGCGGACAGCTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIEEYWAD*ADSLVL
Trigger: GAGCACCAAGCTGTCCGCCCAGTCAGCCCAGTACTC...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GAAACAAAACATGAAGGGAAATGGAAATGTTACCCTCACTCCCCTCCTCCCTGCCTGATCAGTCCCTGCTaGCTGAAACTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ETKHEGKWKCYPHSPPPCLISPC*LKLLRW
Trigger: CCACCTCAGCAGTTTCAGCCAGCAGGGACTGATCAG...GCAGGGAGGAGGGGAGTGAGGGTAACATTTCCATTTCCCTTCATGTTTTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGTCAAGGCTTCCCTaGCCTTCAGGTGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIGSRLP*PSGEGI
Trigger: GATCCCCTCACCTGAAGGCCAGGGAAGCCTTGACCC...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTGGACAGCAGCATCACTaGGGGTCAAGGCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVGQQHH*GSRLPW
Trigger: CCAGGGAAGCCTTGACCCCCAGTGATGCTGCTGTCC...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAAGCTCTACTTCCACCTaGAGTTGCACAGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WARTTRDLDGWFPAPEISSSTST*SCTVSG
Trigger: GCCTGAGACTGTGCAACTCCAGGTGGAAGTAGAGCT...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCAGCCGGGACTGCACTaGGCTGGGCTCTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRIQPGLH*AGLLLL
Trigger: GAGCAATAAGAGCCCAGCCCAGTGCAGTCCCGGCTG...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
3UTR CAA 72 bp TGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTaGAAGATAGGGACAGCAGCATCACTGGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: CCSGSLMVWSDS*KIGTAASLGVK
Trigger: CTTGACCCCCAGTGATGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATAATACACCAGGCTCCTaGAGAAACAGCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: INPLRPLQLLRILAPAPDNTPGS*RNSFRS
Trigger: AGACCTGAAGCTGTTTCTTCAGGAGCCTGGTGTATT...ATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAACGGCTGGTCAAGCGCTaGACCTCTTTCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKRLVKR*TSFSRP
Trigger: TGGCCTGGAGAAAGAGGTTCAGCGCTTGACCAGCCG...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAAGAGGTCCGGGAAGTTaGGATATCGCTCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTRGPGS*DIAQGQ
Trigger: TTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCT...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAAACCCCTCGTGCACTTaGAGGGAACCCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKINPSCT*REPQSF
Trigger: GAAGCTCTGGGGTTCCCTTCAAGTGCACGAGGGGTT...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAAGCCAGTTTCTGGAGTaGCTGCCCATACTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITSQFLE*LPILPF
Trigger: GAACGGGAGTATGGGCAGGCACTCCAGAAACTGGCT...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGTACTCATTGCGGGCTaGTTGCAGCTGCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRVLIAG*LQLLGV
Trigger: TACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTAC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCTCCAGGATGACCTCTaGGGCTTCCAGCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVLQDDL*GFQLSV
Trigger: CACACTGAGCTGGAAGCCGCAGAGGTCATCCTGGAG...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGAAGCTCAGCTCCTCTaGACTCTGTCCGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITEAQLL*TLSGVA
Trigger: AGCTACACCGGACAGAGTGCAGAGGAGCTGAGCTTC...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGTGCAGGCTTAGCCTTTaGTATAAATCCCTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRCRLSL*YKSLGL
Trigger: CAAACCAAGGGATTTATAGCAAAGGCTAAGCCTGCA...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAATCAGCCTGCGCCCTCTaGAGGTTCTCTGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIESACAL*RFSVPF
Trigger: GAAGGGAACAGAGAACCTCCAGAGGGCGCAGGCTGA...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GAGGTAATCTCATCTTCCCATCACCTACTTAAACTATTTAAGCCTTTCGGCTCCCGGTTTAGCCTGGCCTaGACATCAGCCGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EVISSSHHLLKLFKPFGSRFSLA*TSAAFS
Trigger: GGAGAAGGCGGCTGATGTCCAGGCCAGGCTAAACCG...GGAGCCGAAAGGCTTAAATAGTTTAAGTAGGTGATGGGAAGATGAGATTACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCACTGGGCGGACAGCTTaGTGCTCAGTTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRTGRTA*CSVSGD
Trigger: GTCTCCAGAAACTGAGCACCAAGCTGTCCGCCCAGT...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GAGGTAATCTCATCTTCCCATCACCTACTTAAACTATTTAAGCCTTTCGGCTCCTGCTCCCAGCTTACCTaGGAGGTTGTCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: EVISSSHHLLKLFKPFGSCSQLT*EVVCSP
Trigger: CGGGGAGCAGACAACCTCCCAGGTAAGCTGGGAGCA...GGAGCCGAAAGGCTTAAATAGTTTAAGTAGGTGATGGGAAGATGAGATTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACACTGATCAGTCCCTGCTaGCTGAAACTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITLISPC*LKLLRW
Trigger: CCACCTCAGCAGTTTCAGCCAGCAGGGACTGATCAG...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAAAGCATCCTCAGCGGTTaGAGAGAGGTCCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIESILSG*REVPLG
Trigger: TCCCAGAGGGACCTCTCTCCAACCGCTGAGGATGCT...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCAGCATCCTCAGCGGTTaGAGAGAGGTCCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRISILSG*REVPLG
Trigger: TCCCAGAGGGACCTCTCTCCAACCGCTGAGGATGCT...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAAGTGAGGGGATCTGGGTaGCCAGGATCCGGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKVRGSG*PGSGAL
Trigger: TAAAGCCCCGGATCCTGGCCACCCAGATCCCCTCAC...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCCCCAAAAGTGGGCCTTaGCTCTTTCCTCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRPKSGP*LFPPGL
Trigger: CAGTCCAGGAGGAAAGAGCCAAGGCCCACTTTTGGG...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTAGCCAGTTTCTGGAGTaGCTGCCCATACTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVSQFLE*LPILPF
Trigger: GAACGGGAGTATGGGCAGGCACTCCAGAAACTGGCT...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACGTTGCAGTACCCGATaGCCATGGTTCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISRCSTR*PWFWIL
Trigger: CAAGATCCAGAACCATGGGCATCGGGTACTGCAACG...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR GCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCCGTTGCAGTACCCGATaGCCATGGTTCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRRCSTR*PWFWIL
Trigger: CAAGATCCAGAACCATGGGCATCGGGTACTGCAACG...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCCATACTCCCGTTCAATaGCTGCCCTCTGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRHTPVQ*LPSACC
Trigger: ACAGCAAGCAGAGGGCAGCCATTGAACGGGAGTATG...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTAGAGGTCCGGGAAGTTaGGATATCGCTCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVRGPGS*DIAQGQ
Trigger: TTGTCCCTGAGCGATATCTCAACTTCCCGGACCTCT...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCAGTTGCTCTGGATCATTaGTGGTGTGGTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISVALDH*WCGLTA
Trigger: AGCTGTCAGACCACACCATCAATGATCCAGAGCAAC...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCAGGGAGTATGTGAGGTaGGTCTGCCTGAGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRIREYVR*VCLSPK
Trigger: TTTAGGGCTCAGGCAGACTCACCTCACATACTCCCT...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAAGCCAGGTCTGAAGGATaGTCAGCTGTTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKARSEG*SAVPGS
Trigger: GCTTCCTGGAACAGCTGAGCATCCTTCAGACCTGGC...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR GCA 90 bp GAGGTAATCTCATCTTCCCATCACCTACTTAAACTATTTAAGCCTTTCGGCTCCCTCCCGTTCAATGGCTaGCCTCTGCTTGCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: EVISSSHHLLKLFKPFGSLPFNG*PLLAVG
Trigger: TCCTACAGCAAGCAGAGGGCAGCCATTGAACGGGAG...GGAGCCGAAAGGCTTAAATAGTTTAAGTAGGTGATGGGAAGATGAGATTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp TCTATCAGGTACAATGTTCACTATTTGAGTTACAGGTACACTAGAAGCCCAATCCAGCAGACGGATGAGTaGCCCCTCAGGGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SIRYNVHYLSYRYTRSPIQQTDE*PLREAQ
Trigger: CTGAGCTTCCCTGAGGGGGCACTCATCCGTCTGCTG...GATTGGGCTTCTAGTGTACCTGTAACTCAAATAGTGAACATTGTACCTGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR GCA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAAAGAAGCGCTATGGACTaGACGAACACCGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIERSAMD*TNTVMA
Trigger: AGCCATCACGGTGTTCGTGCAGTCCATAGCGCTTCT...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCAAGACTGGTCCGAGAGTaGAAGATCCCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISRLVRE*KIPWSL
Trigger: AAGTGACCATGGGATCTTCCACTCTCGGACCAGTCT...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGGATCATTGATGGTGTaGTCTGACAGCTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: SINPLRPLQLLRILAPAPGSLMV*SDSLKI
Trigger: TATCTTCAAGCTGTCAGACCACACCATCAATGATCC...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACATTGGCTGTGTTGCTCTaGATCATTGATGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTLAVLL*IIDGVV
Trigger: GACCACACCATCAATGATCCAGAGCAACACAGCCAA...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGATAGGACCTACTCCTaGTCTCTCATTGTTGACCCC +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITDRTYS*SLIVDP
Trigger: GGGGTCAACAATGAGAGACCAGGAGTAGGTCCTATC...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAATCTTTCCTCCTGGACTaGGAGCTCCGGCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKSFLLD*ELRQKS
Trigger: TGACTTCTGCCGGAGCTCCCAGTCCAGGAGGAAAGA...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR TCA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATTGATGGTGTGGTCTaGCAGCTTGAAGATAGGGAC +
Preference number: 4 (lower is better)
Translates to: RALYSLSINPLRPLQLLRIDGVV*QLEDRD
Trigger: GTCCCTATCTTCAAGCTGTCAGACCACACCATCAAT...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCATGCCTGAGCCCTAAATaGGGTAATCTCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISCLSPK*GNLIFP
Trigger: TGGGAAGATGAGATTACCTCATTTAGGGCTCAGGCA...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGAGTGGAAGATCCCATaGTCACTTCGGTTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIEWKIP*SLRFSL
Trigger: CAGGCTAAACCGAAGTGACCATGGGATCTTCCACTC...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCGAGTGGAAGATCCCATaGTCACTTCGGTTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALYSLSINPLRPLQLLRIEWKIP*SLRFSL
Trigger: CAGGCTAAACCGAAGTGACCATGGGATCTTCCACTC...GATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAAGACTGGTCCGAGAGTaGAAGATCCCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIRLVRE*KIPWSL
Trigger: AAGTGACCATGGGATCTTCCACTCTCGGACCAGTCT...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTTCAGTTTCTGGAGACTaGTCCGAGAGTGGAAGATCC +
Preference number: 4 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVSVSGD*SESGRS
Trigger: GGATCTTCCACTCTCGGACCAGTCTCCAGAAACTGA...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACATTGGCTGTGTTGCTCTaGATCATTGATGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITLAVLL*IIDGVV
Trigger: GACCACACCATCAATGATCCAGAGCAACACAGCCAA...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGCGATTCCAGCTTTTaGCTGTGTTGCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIGDSSF*LCCSGS
Trigger: TGATCCAGAGCAACACAGCCAAAAGCTGGAATCGCC...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR TCA 90 bp GAGGTAATCTCATCTTCCCATCACCTACTTAAACTATTTAAGCCTTTCGGCTCCGTTGCTCTGGATCATTaGTGGTGTGGTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: EVISSSHHLLKLFKPFGSVALDH*WCGLTA
Trigger: AGCTGTCAGACCACACCATCAATGATCCAGAGCAAC...GGAGCCGAAAGGCTTAAATAGTTTAAGTAGGTGATGGGAAGATGAGATTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR GCA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAAGCTTTTGGCTGTGTTaGTCTGGATCATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITSFWLC*SGSLMV
Trigger: CACCATCAATGATCCAGAGCAACACAGCCAAAAGCT...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp TTTTGGCTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAAGAGACCTTGATGGATaGTTTCCAGCCCCAGAGATT +
Preference number: 4 (lower is better)
Translates to: FWLCCSGSLMVWSDSLKIRDLDG*FPAPEI
Trigger: AATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCT...TATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CCA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCAGGATCATTGATGGTGTaGTCTGACAGCTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: TTRDLDGWFPAPEISGISGSLMV*SDSLKI
Trigger: TATCTTCAAGCTGTCAGACCACACCATCAATGATCC...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCGTCATCTACTCCATCTaGGGCCCGGGGCAGCAGACG +
Preference number: 5 (lower is better)
Translates to: GWPGSGALAGGGGGGRIGVIYSI*GPGQQT
Trigger: CGTCTGCTGCCCCGGGCCCAAGATGGAGTAGATGAC...GCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp GAGAGGTCCCTCTGGGACAGCCGAGCCTCACTGAGCCGCCGCTCCTaGTCCACCTCATCCTGGGCCTGGGTCATGGCTGGCTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ERSLWDSRASLSRRS*STSSWAWVMAGFSQ
Trigger: CTGGCTGAAGCCAGCCATGACCCAGGCCCAGGATGAGGTGGAGCAGGAGCGGCGGCTCAGTGAGGCTCGGCTGTCCCAGAGGGACCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000518499.1
ENST00000522126.5
ENST00000523856.5
CDS CCA 90 bp CTCCGCCCTGTACCCCCTGCTAGGTCACGGTATCGGTCAGACGCCTaGAGTCGGGTTTGGCCCCCAGCCACGGTGGCATCCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LRPVPPARSRYRSDA*SRVWPPATVASSRQ
Trigger: CTGCCTGCTGGATGCCACCGTGGCTGGGGGCCAAACCCGACTCCAGGCGTCTGACCGATACCGTGACCTAGCAGGGGGTACAGGGCGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp GGAGGTTGTCTGCTCCCCGCGGTGGGCATGCTCCAGGATGACCTCTaGGGCTTCCAGCTCAGTGTGGCTCAGGGAGGTCAGGGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GGCLLPAVGMLQDDL*GFQLSVAQGGQGVP
Trigger: AGGGACCCCCTGACCTCCCTGAGCCACACTGAGCTGGAAGCCGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGAGCAGACAACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522386.1
ENST00000522763.5
ENST00000522783.5
CDS-3UTR CAA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTCTGCCCCGCAGGGATaGTCACTGTCTTGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRSAPQG*SLSWLL
Trigger: GAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGA...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp TTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATAGCTTACCTGGGAGGTaGTCTGCTCCCCGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: FSRRGRWWTHRPESRCHHSLPGR*SAPRGG
Trigger: CCCACCGCGGGGAGCAGACAACCTCCCAGGTAAGCT...ATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS TCA 90 bp TTACCTGGGAGGTTGTCTGCTCCCCGCGGTGGGCATGCTCCAGGATaGCCTCTGCGGCTTCCAGCTCAGTGTGGCTCAGGGAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LPGRLSAPRGGHAPG*PLRLPAQCGSGRSG
Trigger: CCCTGACCTCCCTGAGCCACACTGAGCTGGAAGCCGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGAGCAGACAACCTCCCAGGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522386.1
ENST00000522763.5
ENST00000522783.5
ENST00000523856.5
CDS GCA 90 bp TGCTCCCAGCTTACCTGGGAGGTTGTCTGCTCCCCGCGGTGGGCATaGTCCAGGATGACCTCTGCGGCTTCCAGCTCAGTGTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: CSQLTWEVVCSPRWA*SRMTSAASSSVWLR
Trigger: CCTGAGCCACACTGAGCTGGAAGCCGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGAGCAGACAACCTCCCAGGTAAGCTGGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522386.1
ENST00000522763.5
ENST00000522783.5
ENST00000523856.5
CDS-3UTR CAA 90 bp ATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGGAGAGGTCCGGGAAGTaGAGATATCGCTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: IRGFSRRGRWWTHRPESRERSGK*RYRSGT
Trigger: TGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTC...CCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp ACATCAGCCGCCTTCTCCTGTGCCAAGGCCCACACACGTTCCCGCTaGCCATACAGCTTCCGACTTCGGCTCAGCTCCCGGACAGACTGC +
Preference number: 5 (lower is better)
Translates to: TSAAFSCAKAHTRSR*PYSFRLRLSSRTDC
Trigger: GCAGTCTGTCCGGGAGCTGAGCCGAAGTCGGAAGCTGTATGGGCAGCGGGAACGTGTGTGGGCCTTGGCACAGGAGAAGGCGGCTGATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp GCTTCCAGCTCAGTGTGGCTCAGGGAGGTCAGGGGGTCCCTCAAGTaGTCTGACAGCTCACTGACCAGGGCCTTGAGCAGAGCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: ASSSVWLREVRGSLK*SDSSLTRALSRAGS
Trigger: ACTGCCAGCTCTGCTCAAGGCCCTGGTCAGTGAGCTGTCAGAGCACTTGAGGGACCCCCTGACCTCCCTGAGCCACACTGAGCTGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp GCGCTGAACCTCTTTCTCCAGGCCACTCTTGCCAGCCACGCCTTCTaGTCCCCACTCCAGGACACACACCTGATCAGTCCCTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ALNLFLQATLASHAF*SPLQDTHLISPCWL
Trigger: CAGCCAGCAGGGACTGATCAGGTGTGTGTCCTGGAGTGGGGAGCAGAAGGCGTGGCTGGCAAGAGTGGCCTGGAGAAAGAGGTTCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522763.5
ENST00000522783.5
ENST00000523856.5
CDS GCA 90 bp GGAGCCTCCCGCTCTGAAGCCTGCTGCCGCCTCTGCTCCAGTCGTTaGAGTACCTGGTTGGGAAGGCAGAGAACAGGGGTGGGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: GASRSEACCRLCSSR*STWLGRQRTGVGGN
Trigger: ATTTCCACCCACCCCTGTTCTCTGCCTTCCCAACCAGGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518499.1
ENST00000523856.5
CDS-3UTR CAA 90 bp GGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGGGCAAGTTTCCACCCTaGGAGGTGAGGGTGGAAATA +
Preference number: 5 (lower is better)
Translates to: GGGGGGRIGLSRGAIMSRGKFPP*EVRVEI
Trigger: TATTTCCACCCTCACCTCCAAGGGTGGAAACTTGCC...CCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp TTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGGGCGATTCCAGCTTTaGGCTGTGTTGCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: FSRRGRWWTHRPESRCHHGRFQL*AVLLWI
Trigger: GATCCAGAGCAACACAGCCAAAAGCTGGAATCGCCC...ATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp TCCTGTAACCTCTGTTCTATGCTTGGAGCCTCCCGCTCTGAAGCCTaGTGCCGCCTCTGCTCCAGTCGTTGCAGTACCCGATGCCCATGG +
Preference number: 5 (lower is better)
Translates to: SCNLCSMLGASRSEA*CRLCSSRCSTRCPW
Trigger: CCATGGGCATCGGGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAAGCATAGAACAGAGGTTACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CAA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGCTAAGCACCTGCTCCTaGGCGCTCCGCCCTGTACCC +
Preference number: 5 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRLSTCS*ALRPVP
Trigger: GGGTACAGGGCGGAGCGCCAAGGAGCAGGTGCTTAG...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CTGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTGAGAAGGGTCATCTACTCCATCTaGGGCCCGGGGCAGCAGACG +
Preference number: 5 (lower is better)
Translates to: LGAPAEVRLHNVPHNLRRVIYSI*GPGQQT
Trigger: CGTCTGCTGCCCCGGGCCCAAGATGGAGTAGATGAC...CCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp GGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATGTCCAGGCAGCTTTTGGCTGTGTaGCTCTGGATCATTGATGGT +
Preference number: 5 (lower is better)
Translates to: GGGGGGRIGLSRGAIMSRQLLAV*LWIIDG
Trigger: ACCATCAATGATCCAGAGCAACACAGCCAAAAGCTG...CCTGGACATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp ATCTGGGTGGCCAGGATCCGGGGCTTTAGCCGGCGGGGGAGGTGGTGGACGCATGGGAAGTCCAGGGCTTaGTCTATCAGGTACAATGTT +
Preference number: 5 (lower is better)
Translates to: IWVARIRGFSRRGRWWTHGKSRA*SIRYNV
Trigger: AACATTGTACCTGATAGACAAAGCCCTGGACTTCCC...ATGCGTCCACCACCTCCCCCGCCGGCTAAAGCCCCGGATCCTGGCCACCCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp GCCAGCCAGTTTCTGGAGTGCCTGCCCATACTCCCGTTCAATGGCTaGCCTCTGCTTGCTGTAGGATCTGATGTCCTCCAGCAGATCCGC +
Preference number: 5 (lower is better)
Translates to: ASQFLECLPILPFNG*PLLAVGSDVLQQIR
Trigger: GCGGATCTGCTGGAGGACATCAGATCCTACAGCAAGCAGAGGGCAGCCATTGAACGGGAGTATGGGCAGGCACTCCAGAAACTGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp GTAGCCACCAAGTTAAGCAGGTACTCATTGCGGGCTGCTTGCAGCTaGTGGGAGTACTGGGCTGACTGGGCGGACAGCTTGGTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: VATKLSRYSLRAACS*WEYWADWADSLVLS
Trigger: ACTGAGCACCAAGCTGTCCGCCCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAACTTGGTGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp GCATTGGTAGCCACCAAGTTAAGCAGGTACTCATTGCGGGCTGCTTaGAGCTGCTGGGAGTACTGGGCTGACTGGGCGGACAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: ALVATKLSRYSLRAA*SCWEYWADWADSLV
Trigger: CACCAAGCTGTCCGCCCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAACTTGGTGGCTACCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CAGGAATGCTGTGGGCTCTGCCCCGCAGGGATTGTCACTGTCTTGGCTGCTCTCTTAAGCAGGTACTCATaGCGGGCTGCTTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QECCGLCPAGIVTVLAALLSRYS*RAACSC
Trigger: GCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAA...GAGAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGAGCCCACAGCATTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CAA 90 bp ACAAAGCCTACCTCGCCGTGCTGGTTCCGAGCCTTGACCCATTCGTCAGCATCTTCACTGACCAGGGCCTaGAGCAGAGCTGGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: TKPTSPCWFRALTHSSASSLTRA*SRAGSS
Trigger: GGAACTGCCAGCTCTGCTCAAGGCCCTGGTCAGTGA...AGATGCTGACGAATGGGTCAAGGCTCGGAACCAGCACGGCGAGGTAGGCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CAA 90 bp CTGGGAGCTCCGGCAGAAGTCAGGCTACACAATGTGCCCCACAATCTGAGAAGGCCTCTGCTCCAGTCGTaGCAGTACCCGATGCCCATG +
Preference number: 5 (lower is better)
Translates to: LGAPAEVRLHNVPHNLRRPLLQS*QYPMPM
Trigger: CATGGGCATCGGGTACTGCAACGACTGGAGCAGAGG...CCTTCTCAGATTGTGGGGCACATTGTGTAGCCTGACTTCTGCCGGAGCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCTCATTGCGGGCTGCTaGCAGCTGCTGGGAGTACTG +
Preference number: 5 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSLIAGC*QLLGVL
Trigger: CAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAG...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTTCTGCCCCGCAGGGATaGTCACTGTCTTGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGSAPQG*SLSWLL
Trigger: GAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGA...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGCTAAGCACCTGCTCCTaGGCGCTCCGCCCTGTACCC +
Preference number: 5 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMLSTCS*ALRPVP
Trigger: GGGTACAGGGCGGAGCGCCAAGGAGCAGGTGCTTAG...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CTGGTTCCGAGCCTTGACCCATTCGTCAGCATCTCCCTCCTCTATGACCTCCAGTGGTCGAGGTGGGCATaGGTAGCCACCAAGTTAAGC +
Preference number: 5 (lower is better)
Translates to: LVPSLDPFVSISLLYDLQWSRWA*VATKLS
Trigger: GCTTAACTTGGTGGCTACCAATGCCCACCTCGACCA...CTGGAGGTCATAGAGGAGGGAGATGCTGACGAATGGGTCAAGGCTCGGAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CAA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCAAGCTTACCTGGGAGGTaGTCTGCTCCCCGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAASLPGR*SAPRGG
Trigger: CCCACCGCGGGGAGCAGACAACCTCCCAGGTAAGCT...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGTGGTCGAGGTGGGCATaGGTAGCCACCAAGTTAAGC +
Preference number: 5 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRWSRWA*VATKLS
Trigger: GCTTAACTTGGTGGCTACCAATGCCCACCTCGACCA...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAAGCTTACCTGGGAGGTaGTCTGCTCCCCGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTSLPGR*SAPRGG
Trigger: CCCACCGCGGGGAGCAGACAACCTCCCAGGTAAGCT...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGTGCTGGTTCCGAGCCTaGACCCATTCGTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRCWFRA*THSSAS
Trigger: AGATGCTGACGAATGGGTCAAGGCTCGGAACCAGCA...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGAGAGGTCCGGGAAGTaGAGATATCGCTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRERSGK*RYRSGT
Trigger: TGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTC...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCGGGATTGTCACTGTCTaGGCTGCTCTCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: VNKSAQTITAASHPGSSSGIVTV*AALWEG
Trigger: TCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCC...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp TGGGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGGGCGATTCCAGCTTTaGGCTGTGTTGCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: WVPALEMGRGKFPPLEVRGRFQL*AVLLWI
Trigger: GATCCAGAGCAACACAGCCAAAAGCTGGAATCGCCC...CCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp AATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCGGGCGATTCCAGCTTTaGGCTGTGTTGCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: NPLRPLQLLRILAPAPDSGRFQL*AVLLWI
Trigger: GATCCAGAGCAACACAGCCAAAAGCTGGAATCGCCC...GGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp TTTAGCCGGCGGGGGAGGTGGTGGACGCATCGGCCTGAGTCGAGGTGCCATCATCGTGCCCTTTATTCATaGTCAATAAATCCGCTCAGA +
Preference number: 5 (lower is better)
Translates to: FSRRGRWWTHRPESRCHHRALYS*SINPLR
Trigger: TCTGAGCGGATTTATTGACAATGAATAAAGGGCACG...ATGATGGCACCTCGACTCAGGCCGATGCGTCCACCACCTCCCCCGCCGGCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAAGCCCCTTGCCTCCATaGCAGCCGCAGCAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLSPLPP*QPQQEA
Trigger: GGCCTCTTGCTGCGGCTGCAATGGAGGCAAGGGGCT...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp TGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCACTCATTGCGGGCTGCTaGCAGCTGCTGGGAGTACTG +
Preference number: 5 (lower is better)
Translates to: WARTTRDLDGWFPAPEISLIAGC*QLLGVL
Trigger: CAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAG...TGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGTCACTGACCAGGGCCTaGAGCAGAGCTGGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMSLTRA*SRAGSS
Trigger: GGAACTGCCAGCTCTGCTCAAGGCCCTGGTCAGTGA...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GAAACAAAACATGAAGGGAAATGGAAATGTTACCCTCACTCCCCTCCTCCCTGCGGGAAGTCCAGGGCTTaGTCCCCAGGCAGGACAGGT +
Preference number: 5 (lower is better)
Translates to: ETKHEGKWKCYPHSPPPCGKSRA*SPGRTG
Trigger: ACCTGTCCTGCCTGGGGACAAAGCCCTGGACTTCCC...GCAGGGAGGAGGGGAGTGAGGGTAACATTTCCATTTCCCTTCATGTTTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp CCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGATTCCCAAGAACTACTAGAGACCTaGATGGATGGTTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PLRPLQLLRILAPAPDSQELLET*MDGFQP
Trigger: GGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTC...TTGGGAATCAGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTAGGAAAACACAGCCGGACTCCTGGTCTCTCATaGTTGACCCCTCCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GQPSKPDTSDHQVGKHSRTPGLS*LTPPLS
Trigger: AGAAAGGGGAGGGGTCAACAATGAGAGACCAGGAGT...CCGGCTGTGTTTTCCTACCTGGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp GATTTCAGGCATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCTAAGCACCTGCTCCTaGGCGCTCCGCCCTGTACCC +
Preference number: 5 (lower is better)
Translates to: DFRHFTTLDRVMTEEKVVLSTCS*ALRPVP
Trigger: GGGTACAGGGCGGAGCGCCAAGGAGCAGGTGCTTAG...AACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATGCCTGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTATCACTGACCAGGGCCTaGAGCAGAGCTGGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLSLTRA*SRAGSS
Trigger: GGAACTGCCAGCTCTGCTCAAGGCCCTGGTCAGTGA...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACACCTCTGCTCCAGTCGTaGCAGTACCCGATGCCCATG +
Preference number: 5 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTPLLQS*QYPMPM
Trigger: CATGGGCATCGGGTACTGCAACGACTGGAGCAGAGG...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CAA 90 bp TCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCTGAGAGGTCCGGGAAGTaGAGATATCGCTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: SINPLRPLQLLRILAPAPERSGK*RYRSGT
Trigger: TGTCCCTGAGCGATATCTCAACTTCCCGGACCTCTC...AGGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp ATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCACCACCCTAGATAGGGTCATGGGGATTGTCACTGTCTaGGCTGCTCTCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: MVSSPRDFRHFTTLDRVMGIVTV*AALWEG
Trigger: TCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCC...CATGACCCTATCTAGGGTGGTGAAATGCCTGAAATCTCTGGGGCTGGAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGTCATCTACTCCATCTaGGGCCCGGGGCAGCAGACG +
Preference number: 5 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITVIYSI*GPGQQT
Trigger: CGTCTGCTGCCCCGGGCCCAAGATGGAGTAGATGAC...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GGAAAGAGGTGGGCCAGAACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGTGTGGTCTGACAGCTaGAAGATAGGGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GKRWARTTRDLDGWFPAPVWSDS*KIGTAA
Trigger: TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACAC...TGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTCTGGCCCACCTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCATCCTGGCTCCAGCTCCGGCAAGTTTCCACCCTaGGAGGTGAGGGTGGAAATA +
Preference number: 5 (lower is better)
Translates to: VNKSAQTITAASHPGSSSGKFPP*EVRVEI
Trigger: TATTTCCACCCTCACCTCCAAGGGTGGAAACTTGCC...GGAGCTGGAGCCAGGATGCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCAGCAAGAGGCCTCCACTaGTCCGTCAGGGACGCTCCA +
Preference number: 5 (lower is better)
Translates to: TTRDLDGWFPAPEISGISARGLH*SVRDAP
Trigger: TGGAGCGTCCCTGACGGACAAGTGGAGGCCTCTTGC...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCAACCTCTGTTCTATGCTaGGAGCCTCCCGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAATSVLC*EPPALK
Trigger: CTTCAGAGCGGGAGGCTCCAAGCATAGAACAGAGGT...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CAA 90 bp GAAACAAAACATGAAGGGAAATGGAAATGTTACCCTCACTCCCCTCCTCCCTGCGGGATTGTCACTGTCTaGGCTGCTCTCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: ETKHEGKWKCYPHSPPPCGIVTV*AALWEG
Trigger: TCCCTCCCAGAGAGCAGCCAAGACAGTGACAATCCC...GCAGGGAGGAGGGGAGTGAGGGTAACATTTCCATTTCCCTTCATGTTTTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCATCTGCCCCGCAGGGATaGTCACTGTCTTGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: TTRDLDGWFPAPEISGISSAPQG*SLSWLL
Trigger: GAGCAGCCAAGACAGTGACAATCCCTGCGGGGCAGA...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GGTTCCAGCTCTAGAAATGGGAAGGGGCAAGTTTCCACCCTTGGAGGTGAGGGTCAGCTTTTGGCTGTGTaGCTCTGGATCATTGATGGT +
Preference number: 5 (lower is better)
Translates to: GSSSRNGKGQVSTLGGEGQLLAV*LWIIDG
Trigger: ACCATCAATGATCCAGAGCAACACAGCCAAAAGCTG...ACCCTCACCTCCAAGGGTGGAAACTTGCCCCTTCCCATTTCTAGAGCTGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CCGAGCCTTGACCCATTCGTCAGCATCTCCCTCCTCTATGACCTCCAGCCACTCCGTGCCCTTTATTCATaGTCAATAAATCCGCTCAGA +
Preference number: 5 (lower is better)
Translates to: PSLDPFVSISLLYDLQPLRALYS*SINPLR
Trigger: TCTGAGCGGATTTATTGACAATGAATAAAGGGCACG...GAGTGGCTGGAGGTCATAGAGGAGGGAGATGCTGACGAATGGGTCAAGGCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS-3UTR CAA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGACTGGGCGGACAGCTaGGTGCTCAGTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RALYSLSINPLRPLQLLRDWADS*VLSFWR
Trigger: TCTCCAGAAACTGAGCACCAAGCTGTCCGCCCAGTC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CTGTGTTGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACATGCTGGTTCCGAGCCTaGACCCATTCGTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: LCCSGSLMVWSDSLKIGTCWFRA*THSSAS
Trigger: AGATGCTGACGAATGGGTCAAGGCTCGGAACCAGCA...TGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCAACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCAGTGTGGTCTGACAGCTaGAAGATAGGGACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAAVWSDS*KIGTAA
Trigger: TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACAC...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAAGACTGGGCGGACAGCTaGGTGCTCAGTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIEDWADS*VLSFWR
Trigger: TCTCCAGAAACTGAGCACCAAGCTGTCCGCCCAGTC...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAACAATGGGAAAACTCATTGCGGGCTGCTaGCAGCTGCTGGGAGTACTG +
Preference number: 5 (lower is better)
Translates to: HDRREGSSGPRDDRTMGKLIAGC*QLLGVL
Trigger: CAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAG...TTTTCCCATTGTTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCATTAAGCAGGTACTCATaGCGGGCTGCTTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TTRDLDGWFPAPEISGISLSRYS*RAACSC
Trigger: GCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAA...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACATGGTCGAGGTGGGCATaGGTAGCCACCAAGTTAAGC +
Preference number: 5 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITWSRWA*VATKLS
Trigger: GCTTAACTTGGTGGCTACCAATGCCCACCTCGACCA...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCACCTCTGTTCTATGCTaGGAGCCTCCCGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: RALYSLSINPLRPLQLLRTSVLC*EPPALK
Trigger: CTTCAGAGCGGGAGGCTCCAAGCATAGAACAGAGGT...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS-3UTR CAA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCTCCCAAAAGTGGGCCTaGGCTCTTTCCTCCTGGACT +
Preference number: 5 (lower is better)
Translates to: RALYSLSINPLRPLQLLRSQKWA*ALSSWT
Trigger: AGTCCAGGAGGAAAGAGCCAAGGCCCACTTTTGGGA...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp CTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAGATGATAGAATTAAGCAGGTACTCATaGCGGGCTGCTTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LDRVMTEEKVVPVLEMIELSRYS*RAACSC
Trigger: GCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAA...TTCTATCATCTCTAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp TGCTCTGGATCATTGATGGTGTGGTCTGACAGCTTGAAGATAGGGACAGCAGCACAGCTTTTGGCTGTGTaGCTCTGGATCATTGATGGT +
Preference number: 5 (lower is better)
Translates to: CSGSLMVWSDSLKIGTAAQLLAV*LWIIDG
Trigger: ACCATCAATGATCCAGAGCAACACAGCCAAAAGCTG...TGCTGCTGTCCCTATCTTCAAGCTGTCAGACCACACCATCAATGATCCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTAGAACTACTAGAGACCTaGATGGATGGTTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLELLET*MDGFQP
Trigger: GGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTC...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS TCA 90 bp ACCCTTCCCCCAGACCTCTACTGTAAAATAGGCTCGTTCCAGATTTaGCAGGTGATGGGCATGAGGTATAGGAAGGAGAGAAGAAGACAT +
Preference number: 5 (lower is better)
Translates to: TLPPDLYCKIGSFQI*QVMGMRYRKERRRH
Trigger: ATGTCTTCTTCTCTCCTTCCTATACCTCATGCCCATCACCTGTCAAATCTGGAACGAGCCTATTTTACAGTAGAGGTCTGGGGGAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522386.1
CDS-3UTR CAA 90 bp ACTACTAGAGACCTTGATGGATGGTTTCCAGCCCCAGAGATTTCAGGCATTTCATGTTGCTCTGGATCATaGATGGTGTGGTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: TTRDLDGWFPAPEISGISCCSGS*MVWSDS
Trigger: GCTGTCAGACCACACCATCAATGATCCAGAGCAACA...TGAAATGCCTGAAATCTCTGGGGCTGGAAACCATCCATCAAGGTCTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACATGTTGCTCTGGATCATaGATGGTGTGGTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITCCSGS*MVWSDS
Trigger: GCTGTCAGACCACACCATCAATGATCCAGAGCAACA...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp GCCTGGCCTTCGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGAACTACTAGAGACCTaGATGGATGGTTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: AWPSCPLFIVNKSAQTITELLET*MDGFQP
Trigger: GGGCTGGAAACCATCCATCAAGGTCTCTAGTAGTTC...TGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACGAAGGCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS-3UTR CAA 90 bp CATTTCACCACCCTAGATAGGGTCATGACAGAAGAGAAGGTAGTTCCGGTCCTATATAAATCCCTTGGTTaGGTGGTGGAGGTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: HFTTLDRVMTEEKVVPVLYKSLG*VVEVGK
Trigger: CTTCCCTACCTCCACCACCAAACCAAGGGATTTATA...TAGGACCGGAACTACCTTCTCTTCTGTCATGACCCTATCTAGGGTGGTGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435817.7
CDS-3UTR CAA 90 bp CGTGCCCTTTATTCATTGTCAATAAATCCGCTCAGACCATTACAGCTGCTTCGCGGGAAGTCCAGGGCTTaGTCTATCAGGTACAATGTT +
Preference number: 5 (lower is better)
Translates to: RALYSLSINPLRPLQLLRGKSRA*SIRYNV
Trigger: AACATTGTACCTGATAGACAAAGCCCTGGACTTCCC...GCGAAGCAGCTGTAATGGTCTGAGCGGATTTATTGACAATGAATAAAGGGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522126.5
ENST00000522783.5
CDS GCA 90 bp TGTATAATCAGCTCTGCTCAAGGTACAAAACTAAGGGAGATAGGATaGATAGTGCTCCCACCCCCAATGGCTGTCAAGAAACCAATAATG +
Preference number: 5 (lower is better)
Translates to: CIISSAQGTKLREIG*IVLPPPMAVKKPIM
Trigger: CATTATTGGTTTCTTGACAGCCATTGGGGGTGGGAGCACTATGCATCCTATCTCCCTTAGTTTTGTACCTTGAGCAGAGCTGATTATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520747.1
CDS-3UTR CAA 90 bp TCTATCAGGTACAATGTTCACTATTTGAGTTACAGGTACACTAGAAGCCCAATCGGCAAGTTTCCACCCTaGGAGGTGAGGGTGGAAATA +
Preference number: 5 (lower is better)
Translates to: SIRYNVHYLSYRYTRSPIGKFPP*EVRVEI
Trigger: TATTTCCACCCTCACCTCCAAGGGTGGAAACTTGCC...GATTGGGCTTCTAGTGTACCTGTAACTCAAATAGTGAACATTGTACCTGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS TCA 90 bp TCCCTTACCTGGGGCTACAGAACTAGGAAGCAACAGAAGAGAATTTaGACCTATGTCGGTCTAGCTCCAAAAACTGTGCTCTTAACTATT +
Preference number: 5 (lower is better)
Translates to: SLTWGYRTRKQQKRI*TYVGLAPKTVLLTI
Trigger: AATAGTTAAGAGCACAGTTTTTGGAGCTAGACCGACATAGGTTCAAATTCTCTTCTGTTGCTTCCTAGTTCTGTAGCCCCAGGTAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523856.5
CDS TCA 90 bp GTCCTCTGCAGCAACATGAATGGAGTTGGATGCCATTATCCTAAGTaGACTAACTCAGAAACAGAAAACCAAATATTGCATGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: VLCSNMNGVGCHYPK*TNSETENQILHVLT
Trigger: AGTGAGAACATGCAATATTTGGTTTTCTGTTTCTGAGTTAGTTCACTTAGGATAATGGCATCCAACTCCATTCATGTTGCTGCAGAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520747.1
CDS GCA 90 bp AAAATCCATCACTCTATCCACTGTCCTCAACATTTATTGGGCAACTaGTGTATAATCAGCTCTGCTCAAGGTACAAAACTAAGGGAGATA +
Preference number: 5 (lower is better)
Translates to: KIHHSIHCPQHLLGN*CIISSAQGTKLREI
Trigger: TATCTCCCTTAGTTTTGTACCTTGAGCAGAGCTGATTATACAGCAGTTGCCCAATAAATGTTGAGGACAGTGGATAGAGTGATGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520747.1
CDS GCA 72 bp CTCTGGGACAGCCGAGCCTCACTGAGCCGCCGCTCCTaGTCCACCTCATCCTGGGCCTGGGTCATGGCTGGC +
Preference number: 6 (lower is better)
Translates to: LWDSRASLSRRS*STSSWAWVMAG
Trigger: GCCAGCCATGACCCAGGCCCAGGATGAGGTGGAGCAGGAGCGGCGGCTCAGTGAGGCTCGGCTGTCCCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000518499.1
ENST00000522126.5
ENST00000523856.5
CDS CCA 72 bp AGGTCACGGTATCGGTCAGACGCCTGGAGTCGGGTTTaGCCCCCAGCCACGGTGGCATCCAGCAGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: RSRYRSDAWSRV*PPATVASSRQR
Trigger: GCGCTGCCTGCTGGATGCCACCGTGGCTGGGGGCCAAACCCGACTCCAGGCGTCTGACCGATACCGTGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 72 bp CTGCTCCCCGCGGTGGGCATGCTCCAGGATGACCTCTaGGGCTTCCAGCTCAGTGTGGCTCAGGGAGGTCAG +
Preference number: 6 (lower is better)
Translates to: LLPAVGMLQDDL*GFQLSVAQGGQ
Trigger: CTGACCTCCCTGAGCCACACTGAGCTGGAAGCCGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522386.1
ENST00000522763.5
ENST00000522783.5
ENST00000523856.5
CDS CCA 72 bp GTACCCCCTGCTAGGTCACGGTATCGGTCAGACGCCTaGAGTCGGGTTTGGCCCCCAGCCACGGTGGCATCC +
Preference number: 6 (lower is better)
Translates to: VPPARSRYRSDA*SRVWPPATVAS
Trigger: GGATGCCACCGTGGCTGGGGGCCAAACCCGACTCCAGGCGTCTGACCGATACCGTGACCTAGCAGGGGGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS CCA 72 bp AGCTCAGCATCCTCAGCGGTTGGAGAGAGGTCCCTCTaGGACAGCCGAGCCTCACTGAGCCGCCGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSASSAVGERSL*DSRASLSRRSC
Trigger: GCAGGAGCGGCGGCTCAGTGAGGCTCGGCTGTCCCAGAGGGACCTCTCTCCAACCGCTGAGGATGCTGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000518499.1
ENST00000522126.5
ENST00000523856.5
CDS CCA 72 bp AGCTCAGCATCCTCAGCGGTTGGAGAGAGGTCCCTCTaGGACAGCCGAGCCTCACTGAGCCGCCGCTCCCGA +
Preference number: 6 (lower is better)
Translates to: SSASSAVGERSL*DSRASLSRRSR
Trigger: TCGGGAGCGGCGGCTCAGTGAGGCTCGGCTGTCCCAGAGGGACCTCTCTCCAACCGCTGAGGATGCTGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522783.5
CDS GCA 72 bp GCCTTCTCCTGTGCCAAGGCCCACACACGTTCCCGCTaGCCATACAGCTTCCGACTTCGGCTCAGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: AFSCAKAHTRSR*PYSFRLRLSSR
Trigger: CCGGGAGCTGAGCCGAAGTCGGAAGCTGTATGGGCAGCGGGAACGTGTGTGGGCCTTGGCACAGGAGAAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 72 bp ATCCTCACGCCCTGCCTGATAGCGAAATACCACGTGTaGAGGGCAGGGGAGGGCCCTCGTGGCCAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: ILTPCLIAKYHV*RAGEGPRGQGL
Trigger: CAAGCCCTGGCCACGAGGGCCCTCCCCTGCCCTGCACACGTGGTATTTCGCTATCAGGCAGGGCGTGAGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000518499.1
ENST00000522783.5
ENST00000523856.5
CDS GCA 72 bp GCTCATCCTCACGCCCTGATAGCGAAATACCACGTGTaGAGGGCAGGGGAGGGCCCTCGTGGCCAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: AHPHALIAKYHV*RAGEGPRGQGL
Trigger: CAAGCCCTGGCCACGAGGGCCCTCCCCTGCCCTGCACACGTGGTATTTCGCTATCAGGGCGTGAGGATGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522126.5
CDS CCA 72 bp TCCCAGCTTACCTGGGAGGTTGTCTGCTCCCCGCGGTaGGCATGCTCCAGGATGACCTCTGCGGCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SQLTWEVVCSPR*ACSRMTSAASS
Trigger: GCTGGAAGCCGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGAGCAGACAACCTCCCAGGTAAGCTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522386.1
ENST00000522763.5
ENST00000522783.5
ENST00000523856.5
CDS GCA 72 bp CTTACCTGGGAGGTTGTCTGCTCCCCGCGGTGGGCATaGTCCAGGATGACCTCTGCGGCTTCCAGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: LTWEVVCSPRWA*SRMTSAASSSV
Trigger: CACTGAGCTGGAAGCCGCAGAGGTCATCCTGGAGCATGCCCACCGCGGGGAGCAGACAACCTCCCAGGTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522386.1
ENST00000522763.5
ENST00000522783.5
ENST00000523856.5
CDS GCA 72 bp CTTGGAGCCTCCCGCTCTGAAGCCTGCTGCCGCCTCTaGTCCAGTCGTTGCAGTACCCGATGCCCATGGTTC +
Preference number: 6 (lower is better)
Translates to: LGASRSEACCRL*SSRCSTRCPWF
Trigger: GAACCATGGGCATCGGGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS GCA 72 bp CTTGGAGCCTCCCGCTCTGAAGCCTGCTGCCGCCTCTaGTCCAGTCGTTGCAGTACCTGGTTGGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: LGASRSEACCRL*SSRCSTWLGRQ
Trigger: CTGCCTTCCCAACCAGGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518499.1
ENST00000523856.5
CDS CAA 90 bp CCCGGCGGATGCTCTCTCGCACTTCCTGTAACCTCTGTTCTATGCTaGGAGCCTCCCGCTCTGAAGCCTGCTGCCGCCTCTGCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: PGGCSLALPVTSVLC*EPPALKPAAASAPV
Trigger: GACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAAGCATAGAACAGAGGTTACAGGAAGTGCGAGAGAGCATCCGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000518499.1
ENST00000522126.5
ENST00000523856.5
CDS CAA 72 bp TGGAGGTTCTCTGTTCCCTTCCTAAGCACCTGCTCCTaGGCGCTCCGCCCTGTACCCCCTGCTAGGTCACGG +
Preference number: 6 (lower is better)
Translates to: WRFSVPFLSTCS*ALRPVPPARSR
Trigger: CCGTGACCTAGCAGGGGGTACAGGGCGGAGCGCCAAGGAGCAGGTGCTTAGGAAGGGAACAGAGAACCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 72 bp GCCACCAAGTTAAGCAGGTACTCATTGCGGGCTGCTTaGAGCTGCTGGGAGTACTGGGCTGACTGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: ATKLSRYSLRAA*SCWEYWADWAD
Trigger: GTCCGCCCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAACTTGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 72 bp TCAGTGTGGCTCAGGGAGGTCAGGGGGTCCCTCAAGTaGTCTGACAGCTCACTGACCAGGGCCTTGAGCAGA +
Preference number: 6 (lower is better)
Translates to: SVWLREVRGSLK*SDSSLTRALSR
Trigger: TCTGCTCAAGGCCCTGGTCAGTGAGCTGTCAGAGCACTTGAGGGACCCCCTGACCTCCCTGAGCCACACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522783.5
CDS GCA 72 bp CTCTGTTCTATGCTTGGAGCCTCCCGCTCTGAAGCCTaGTGCCGCCTCTGCTCCAGTCGTTGCAGTACCCGA +
Preference number: 6 (lower is better)
Translates to: LCSMLGASRSEA*CRLCSSRCSTR
Trigger: TCGGGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAAGCATAGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435817.7
ENST00000522126.5
CDS GCA 72 bp CTCTGTTCTATGCTTGGAGCCTCCCGCTCTGAAGCCTaGTGCCGCCTCTGCTCCAGTCGTTGCAGTACCTGG +
Preference number: 6 (lower is better)
Translates to: LCSMLGASRSEA*CRLCSSRCSTW
Trigger: CCAGGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAAGCATAGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518499.1
ENST00000523856.5
CDS GCA 72 bp CCGAACACTGTCCTGCTGTCCATCTCACCGCTCCGGTaGCCTTCCCTCTTCAGGAATGGGCCAGCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: PNTVLLSISPLR*PSLFRNGPASF
Trigger: GAAACTGGCTGGCCCATTCCTGAAGAGGGAAGGGCACCGGAGCGGTGAGATGGACAGCAGGACAGTGTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS CAA 90 bp TGGTCGAGGTGGGCATTGGTAGCCACCAAGTTAAGCAGGTACTCATaGCGGGCTGCTTGCAGCTGCTGGGAGTACTGGGCTGACTGGGCG +
Preference number: 6 (lower is better)
Translates to: WSRWALVATKLSRYS*RAACSCWEYWADWA
Trigger: CGCCCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAACTTGGTGGCTACCAATGCCCACCTCGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS GCA 72 bp GGATGCTCTCTCGCACTTCCTGTAACCTCTGTTCTATaGTTGGAGCCTCCCGCTCTGAAGCCTGCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: GCSLALPVTSVL*LEPPALKPAAA
Trigger: GGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAAGCATAGAACAGAGGTTACAGGAAGTGCGAGAGAGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000518499.1
ENST00000522126.5
ENST00000523856.5
CDS CCA 72 bp TACTCATTGCGGGCTGCTTGCAGCTGCTGGGAGTACTaGGCTGACTGGGCGGACAGCTTGGTGCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: YSLRAACSCWEY*ADWADSLVLSF
Trigger: GAAACTGAGCACCAAGCTGTCCGCCCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS CCA 72 bp TTAAGCAGGTACTCATTGCGGGCTGCTTGCAGCTGCTaGGAGTACTGGGCTGACTGGGCGGACAGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LSRYSLRAACSC*EYWADWADSLV
Trigger: CACCAAGCTGTCCGCCCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS CAA 90 bp TCTGAAGCCTGCTGCCGCCTCTGCTCCAGTCGTTGCAGTACCTGGTaGGGAAGGCAGAGAACAGGGGTGGGTGGAAATACTGTGGGGCAT +
Preference number: 6 (lower is better)
Translates to: SEACCRLCSSRCSTW*GRQRTGVGGNTVGH
Trigger: ATGCCCCACAGTATTTCCACCCACCCCTGTTCTCTGCCTTCCCAACCAGGTACTGCAACGACTGGAGCAGAGGCGGCAGCAGGCTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518499.1
ENST00000523856.5
CDS GCA 72 bp AAGTTAAGCAGGTACTCATTGCGGGCTGCTTGCAGCTaGTGGGAGTACTGGGCTGACTGGGCGGACAGCTTG +
Preference number: 6 (lower is better)
Translates to: KLSRYSLRAACS*WEYWADWADSL
Trigger: CAAGCTGTCCGCCCAGTCAGCCCAGTACTCCCAGCAGCTGCAAGCAGCCCGCAATGAGTACCTGCTTAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS CAA 72 bp TGCTCTCTCGCACTTCCTGTAACCTCTGTTCTATGCTaGGAGCCTCCCGCTCTGAAGCCTGCTGCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: CSLALPVTSVLC*EPPALKPAAAS
Trigger: AGAGGCGGCAGCAGGCTTCAGAGCGGGAGGCTCCAAGCATAGAACAGAGGTTACAGGAAGTGCGAGAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000518499.1
ENST00000522126.5
ENST00000523856.5
CDS CCA 72 bp ACTGGGCGGACAGCTTGGTGCTCAGTTTCTGGAGACTaGTCCGAGAGTGGAAGATCCCATGGTCACTTCGGT +
Preference number: 6 (lower is better)
Translates to: TGRTAWCSVSGD*SESGRSHGHFG
Trigger: ACCGAAGTGACCATGGGATCTTCCACTCTCGGACCAGTCTCCAGAAACTGAGCACCAAGCTGTCCGCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS CCA 72 bp CATGGTTCTGGATCTTGTAGTCACGGGCAGCTCGGCTaGTCAAGCGCTGAACCTCTTTCTCCAGGCCACTCT +
Preference number: 6 (lower is better)
Translates to: HGSGSCSHGQLG*SSAEPLSPGHS
Trigger: AGAGTGGCCTGGAGAAAGAGGTTCAGCGCTTGACCAGCCGAGCTGCCCGTGACTACAAGATCCAGAACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522763.5
ENST00000522783.5
ENST00000523856.5
CDS CCA 72 bp AGGGGTGTCTGGGTTAAAACTGGCCTTGAGCAGAGCTaGCAGTTCCTCCTGGTAGTAATGGTCGAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: RGVWVKTGLEQS*QFLLVVMVEVG
Trigger: GCCCACCTCGACCATTACTACCAGGAGGAACTGCCAGCTCTGCTCAAGGCCAGTTTTAACCCAGACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519800.1
CDS GCA 72 bp TTTCTGGAGTGCCTGCCCATACTCCCGTTCAATGGCTaGCCTCTGCTTGCTGTAGGATCTGATGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: FLECLPILPFNG*PLLAVGSDVLQ
Trigger: CTGGAGGACATCAGATCCTACAGCAAGCAGAGGGCAGCCATTGAACGGGAGTATGGGCAGGCACTCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS CCA 72 bp AGTTTCTGGAGACTGGTCCGAGAGTGGAAGATCCCATaGTCACTTCGGTTTAGCCTGGCCTGGACATCAGCC +
Preference number: 6 (lower is better)
Translates to: SFWRLVREWKIP*SLRFSLAWTSA
Trigger: GGCTGATGTCCAGGCCAGGCTAAACCGAAGTGACCATGGGATCTTCCACTCTCGGACCAGTCTCCAGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435817.7
ENST00000519800.1
ENST00000522126.5
ENST00000522783.5
CDS CCA 72 bp CACCTGATCAGTCCCTGCTGGCTGAAACTGCTGAGGTaGGGTGGGGGAAAATACACCAGGCTCCTGAAGAAA +
Preference number: 6 (lower is better)
Translates to: HLISPCWLKLLR*GGGKYTRLLKK
Trigger: TTTCTTCAGGAGCCTGGTGTATTTTCCCCCACCCCACCTCAGCAGTTTCAGCCAGCAGGGACTGATCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000435817.7
ENST00000522126.5
ENST00000522386.1
ENST00000522763.5
ENST00000522783.5
ENST00000523856.5
CDS CCA 72 bp GTTGCAGTACCTGGTTGGGAAGGCAGAGAACAGGGGTaGGTGGAAATACTGTGGGGCATGACTTACTATGGG +
Preference number: 6 (lower is better)
Translates to: VAVPGWEGREQG*VEILWGMTYYG
Trigger: CCCATAGTAAGTCATGCCCCACAGTATTTCCACCCACCCCTGTTCTCTGCCTTCCCAACCAGGTACTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518499.1
ENST00000523856.5
CDS CAA 72 bp GGTGGAGATGGTGGTAACTCCAGGGAGGGAGACTCCTaGTGGACAAGGTGGAAGTACCAGAAAGTTTTAGAA +
Preference number: 6 (lower is better)
Translates to: GGDGGNSREGDS*WTRWKYQKVLE
Trigger: TTCTAAAACTTTCTGGTACTTCCACCTTGTCCACAAGGAGTCTCCCTCCCTGGAGTTACCACCATCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520747.1
CDS GCA 72 bp AGCTCTGCTCAAGGTACAAAACTAAGGGAGATAGGATaGATAGTGCTCCCACCCCCAATGGCTGTCAAGAAA +
Preference number: 6 (lower is better)
Translates to: SSAQGTKLREIG*IVLPPPMAVKK
Trigger: TTTCTTGACAGCCATTGGGGGTGGGAGCACTATGCATCCTATCTCCCTTAGTTTTGTACCTTGAGCAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520747.1
CDS CAA 90 bp AGTCGAGGTGCCATCATGTCCAGGAACCCAGGGAAGTCCAGGGCTTaGTCTGGAAATAAGAACCACAAGTCAGTCTTCAGACTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: SRGAIMSRNPGKSRA*SGNKNHKSVFRLCF
Trigger: AAAACAAAGTCTGAAGACTGACTTGTGGTTCTTATTTCCAGACAAAGCCCTGGACTTCCCTGGGTTCCTGGACATGATGGCACCTCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520747.1
CDS CAA 90 bp TATGAGGTGGGTGCTATTATTGGCCCTACTTTAGTGATGAGGAAATaGAAGTCCAGAGAGGTTAAGTCACTCCCTTACCTGGGGCTACAG +
Preference number: 6 (lower is better)
Translates to: YEVGAIIGPTLVMRK*KSREVKSLPYLGLQ
Trigger: CTGTAGCCCCAGGTAAGGGAGTGACTTAACCTCTCTGGACTTCAATTTCCTCATCACTAAAGTAGGGCCAATAATAGCACCCACCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523856.5
CDS TCA 72 bp TGGGGCTACAGAACTAGGAAGCAACAGAAGAGAATTTaGACCTATGTCGGTCTAGCTCCAAAAACTGTGCTC +
Preference number: 6 (lower is better)
Translates to: WGYRTRKQQKRI*TYVGLAPKTVL
Trigger: GAGCACAGTTTTTGGAGCTAGACCGACATAGGTTCAAATTCTCTTCTGTTGCTTCCTAGTTCTGTAGCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523856.5
CDS GCA 72 bp GAGAAGAAGACATTCTTCATGAGAAAGGCCCTCGTGTaGAGAGCACTTAGAAGTTTAAAACACGTTCACATC +
Preference number: 6 (lower is better)
Translates to: EKKTFFMRKALV*RALRSLKHVHI
Trigger: GATGTGAACGTGTTTTAAACTTCTAAGTGCTCTGCACACGAGGGCCTTTCTCATGAAGAATGTCTTCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522386.1
CDS CCA 72 bp GGTGGAAATACTGTGGGGCATGACTTACTATGGGACTaGTACTTTGCTAGTTGCATCACATACATTATGTCA +
Preference number: 6 (lower is better)
Translates to: GGNTVGHDLLWD*YFASCITYIMS
Trigger: TGACATAATGTATGTGATGCAACTAGCAAAGTACCAGTCCCATAGTAAGTCATGCCCCACAGTATTTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518499.1
ENST00000523856.5
CDS CAA 90 bp CTTTGTCTGGAAATAAGAACCACAAGTCAGTCTTCAGACTTTGTTTaGTTCAATGCTGTATCTCCAGCACTTAGGACAGTGGCATTCTAT +
Preference number: 6 (lower is better)
Translates to: LCLEIRTTSQSSDFV*FNAVSPALRTVAFY
Trigger: ATAGAATGCCACTGTCCTAAGTGCTGGAGATACAGCATTGAACAAAACAAAGTCTGAAGACTGACTTGTGGTTCTTATTTCCAGACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520747.1
CDS CAA 72 bp GAAATAAGAACCACAAGTCAGTCTTCAGACTTTGTTTaGTTCAATGCTGTATCTCCAGCACTTAGGACAGTG +
Preference number: 6 (lower is better)
Translates to: EIRTTSQSSDFV*FNAVSPALRTV
Trigger: CACTGTCCTAAGTGCTGGAGATACAGCATTGAACAAAACAAAGTCTGAAGACTGACTTGTGGTTCTTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520747.1
CDS CAA 72 bp ATACTGTGGGGCATGACTTACTATGGGACTGGTACTTaGCTAGTTGCATCACATACATTATGTCATTTAATC +
Preference number: 6 (lower is better)
Translates to: ILWGMTYYGTGT*LVASHTLCHLI
Trigger: GATTAAATGACATAATGTATGTGATGCAACTAGCAAAGTACCAGTCCCATAGTAAGTCATGCCCCACAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518499.1
ENST00000523856.5
CDS TCA 72 bp AGCAACATGAATGGAGTTGGATGCCATTATCCTAAGTaGACTAACTCAGAAACAGAAAACCAAATATTGCAT +
Preference number: 6 (lower is better)
Translates to: SNMNGVGCHYPK*TNSETENQILH
Trigger: ATGCAATATTTGGTTTTCTGTTTCTGAGTTAGTTCACTTAGGATAATGGCATCCAACTCCATTCATGTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520747.1