RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCGRT (Homo sapiens)

Ensembl gene IDs: ENSG00000104870

Ensembl transcript IDs: ENST00000221466.10, ENST00000426395.7, ENST00000452439.1, ENST00000593381.5, ENST00000594823.5, ENST00000595677.5, ENST00000595881.1, ENST00000596975.5, ENST00000598076.1, ENST00000598319.5, ENST00000598491.5, ENST00000598927.5, ENST00000598936.1, ENST00000599701.5, ENST00000599988.5, ENST00000600273.5

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCG +
Preference number: 1 (lower is better)
Translates to: RGRIRHCWGRSHPGR*QRPAHSAGTEVAAP
Trigger: CGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR CCA 90 bp GACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTaGCCGGTGCCAGCGGCCAGCCCATTCCGCAGGAACCGAAGTTGC +
Preference number: 1 (lower is better)
Translates to: DEAWKDPSLLGPKSP*PVPAASPFRRNRSC
Trigger: GCAACTTCGGTTCCTGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR GCA 90 bp TTCTCCCTCCTGGAGCTGCCTCTCTGGCAAGTCGGCAGAATTTGCTaGACCGTCAGGTGGAATGGAGGGACCGGGCTGACGGCCATCAGC +
Preference number: 1 (lower is better)
Translates to: FSLLELPLWQVGRIC*TVRWNGGTGLTAIS
Trigger: GCTGATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAGGAGGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR GCA 90 bp AGCTTCTCCCTCCTGGAGCTGCCTCTCTGGCAAGTCGGCAGAATTTaGTGCACCGTCAGGTGGAATGGAGGGACCGGGCTGACGGCCATC +
Preference number: 1 (lower is better)
Translates to: SFSLLELPLWQVGRI*CTVRWNGGTGLTAI
Trigger: GATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAGGAGGGAGAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 90 bp GAGCTGCCTCTCTGGCAAGTCGGCAGAATTTGCTGCACCGTCAGGTaGAATGGAGGGACCGGGCTGACGGCCATCAGCAGTTCTGGCTTC +
Preference number: 1 (lower is better)
Translates to: ELPLWQVGRICCTVR*NGGTGLTAISSSGF
Trigger: GAAGCCAGAACTGCTGATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 90 bp GCCTCTCTGGCAAGTCGGCAGAATTTGCTGCACCGTCAGGTGGAATaGAGGGACCGGGCTGACGGCCATCAGCAGTTCTGGCTTCTGCTT +
Preference number: 1 (lower is better)
Translates to: ASLASRQNLLHRQVE*RDRADGHQQFWLLL
Trigger: AAGCAGAAGCCAGAACTGCTGATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR TCA 90 bp CAGGAGGACCCCGGTGTCGTCTCCACGAAGGGAGATCCAAGGGGCTaGGGAGAGAGAGAGAGGGAGAGGTCATCAGAATCTTCCTCATCC +
Preference number: 1 (lower is better)
Translates to: QEDPGVVSTKGDPRG*GERERERSSESSSS
Trigger: GGATGAGGAAGATTCTGATGACCTCTCCCTCTCTCTCTCTCCTCAGCCCCTTGGATCTCCCTTCGTGGAGACGACACCGGGGTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR CCA 90 bp GCTTCAGGAAAGCACAGCAGCTTCTCCCTCCTGGAGCTGCCTCTCTaGCAAGTCGGCAGAATTTGCTGCACCGTCAGGTGGAATGGAGGG +
Preference number: 1 (lower is better)
Translates to: ASGKHSSFSLLELPL*QVGRICCTVRWNGG
Trigger: CCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAGGAGGGAGAAGCTGCTGTGCTTTCCTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 90 bp AGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAATaGTCAGATTCCAGGAAGACCCGCAGCAGCAGCAGCAGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: SRQSVLVRTGIADNE*SDSRKTRSSSSSSS
Trigger: GCTGCTGCTGCTGCTGCTGCTGCGGGTCTTCCTGGAATCTGACCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR TCA 90 bp CCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTaGCTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGG +
Preference number: 1 (lower is better)
Translates to: PRAAQCSSSGAHRHF*LLVTTRRGRIRHCW
Trigger: CCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR TCA 90 bp CAGAGATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCAGTCGGAATGGCGGATGGTCAGGCG +
Preference number: 1 (lower is better)
Translates to: QRCQCSRRSHSMKGA*LHSLLAVGMADGQA
Trigger: CGCCTGACCATCCGCCATTCCGACTGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCATCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR CCA 90 bp CTGCCTAGGACTGGGCATTACTGCCCAAGTTCCTTTCAGGGAGGGTaGATCTGGGCAATCGTGGGTCTTGGCTGGGATCTTGGTTTTGGT +
Preference number: 1 (lower is better)
Translates to: LPRTGHYCPSSFQGG*IWAIVGLGWDLGFG
Trigger: ACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAAAGGAACTTGGGCAGTAATGCCCAGTCCTAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR TCA 90 bp TCGGCAGAATTTGCTGCACCGTCAGGTGGAATGGAGGGACCGGGCTaGCGGCCATCAGCAGTTCTGGCTTCTGCTTTATGTTCACTATTC +
Preference number: 1 (lower is better)
Translates to: SAEFAAPSGGMEGPG*RPSAVLASALCSLF
Trigger: GAATAGTGAACATAAAGCAGAAGCCAGAACTGCTGATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 90 bp AGGACTGGGCATTACTGCCCAAGTTCCTTTCAGGGAGGGTGGATCTaGGCAATCGTGGGTCTTGGCTGGGATCTTGGTTTTGGTTGCTCA +
Preference number: 1 (lower is better)
Translates to: RTGHYCPSSFQGGWI*AIVGLGWDLGFGCS
Trigger: TGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAAAGGAACTTGGGCAGTAATGCCCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 90 bp GAAAGGGGCCTGACTACATTCGCTTTTAGCAGTCGGAATGGCGGATaGTCAGGCGGTGGCTGGAATCACATTTACATCCTTCAAATCAGC +
Preference number: 1 (lower is better)
Translates to: ERGLTTFAFSSRNGG*SGGGWNHIYILQIS
Trigger: GCTGATTTGAAGGATGTAAATGTGATTCCAGCCACCGCCTGACCATCCGCCATTCCGACTGCTAAAAGCGAATGTAGTCAGGCCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR CCA 90 bp TCAGGGAGGGTGGATCTGGGCAATCGTGGGTCTTGGCTGGGATCTTaGTTTTGGTTGCTCAGCAGAAAACACATTTGCTGCTTCAGGAAA +
Preference number: 1 (lower is better)
Translates to: SGRVDLGNRGSWLGS*FWLLSRKHICCFRK
Trigger: TTTCCTGAAGCAGCAAATGTGTTTTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 90 bp ATTACTGCCCAAGTTCCTTTCAGGGAGGGTGGATCTGGGCAATCGTaGGTCTTGGCTGGGATCTTGGTTTTGGTTGCTCAGCAGAAAACA +
Preference number: 1 (lower is better)
Translates to: ITAQVPFREGGSGQS*VLAGILVLVAQQKT
Trigger: TGTTTTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAAAGGAACTTGGGCAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR GCA 90 bp AATAAAAGGCAAAGATTTCAGCAACTGCCTAGGACTGGGCATTACTaGCCAAGTTCCTTTCAGGGAGGGTGGATCTGGGCAATCGTGGGT +
Preference number: 1 (lower is better)
Translates to: NKRQRFQQLPRTGHY*PSSFQGGWIWAIVG
Trigger: ACCCACGATTGCCCAGATCCACCCTCCCTGAAAGGAACTTGGGCAGTAATGCCCAGTCCTAGGCAGTTGCTGAAATCTTTGCCTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 90 bp CGTCAGGTGGAATGGAGGGACCGGGCTGACGGCCATCAGCAGTTCTaGCTTCTGCTTTATGTTCACTATTCTTTTCAGCAAATCTGTATC +
Preference number: 1 (lower is better)
Translates to: RQVEWRDRADGHQQF*LLLYVHYSFQQICI
Trigger: GATACAGATTTGCTGAAAAGAATAGTGAACATAAAGCAGAAGCCAGAACTGCTGATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR TCA 90 bp GGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAATGGAGGGACCGGGCTaGCGGCCATCAGCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: GRIRHCWGRSHPGRCQRPMEGPG*RPSAVL
Trigger: CAGAACTGCTGATGGCCGTCAGCCCGGTCCCTCCAT...TGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CAA 90 bp ACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCGCAGGAACCGAAGTaGCAGCTCCGGAGGGTAGAAGGAGAAGGCGCTGCAGGTAAGCAC +
Preference number: 2 (lower is better)
Translates to: TLAGASGQPIPQEPK*QLRRVEGEGAAGKH
Trigger: GTGCTTACCTGCAGCGCCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR-3UTR GCA 90 bp CGGCCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCC +
Preference number: 2 (lower is better)
Translates to: RPAHSAGTEVAAPEGRRRSHPGR*QRPAHS
Trigger: GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACT...TCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR-3UTR GCA 90 bp GTCTCATGGGCCCGGGCAGTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACCGGAAAAGCCAGGGCTaGTGGGTCGGGCCTTCAGGC +
Preference number: 2 (lower is better)
Translates to: VSWARAVAKQQAVSLGEDRKSQG*WVGPSG
Trigger: GCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTTCCG...GTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTACTGCCCGGGCCCATGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR GCA 90 bp CAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAATGGTCCACCCTGAGGGGCTaGGCCAGCCCCGCGTGCTGC +
Preference number: 2 (lower is better)
Translates to: QSSRQSVLVRTGIADNEWSTLRG*ASPACC
Trigger: GCAGCACGCGGGGCTGGCGCAGCCCCTCAGGGTGGA...CCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCTGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CAA 90 bp CTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTaGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTC +
Preference number: 2 (lower is better)
Translates to: LLTVSDDEAWKDPSL*GPKSPWPVPAASPF
Trigger: GAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR CAA 90 bp CAGCTTCTCCCTCCTGGAGCTGCCTCTCTGGCAAGTCGGCAGAATTaGCTGCACCGTCAGGTGGAATGGAGGGACCGGGCTGACGGCCAT +
Preference number: 2 (lower is better)
Translates to: QLLPPGAASLASRQN*LHRQVEWRDRADGH
Trigger: ATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAGGAGGGAGAAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CCA 90 bp CCTACAGCCGCTGCCGTGAGTAGCAAGACACCGATGACGATTCCCACCACGAGCAAAAGCCAGGGCTGCTaGGTCGGGCCTTCAGGCGCA +
Preference number: 2 (lower is better)
Translates to: PTAAAVSSKTPMTIPTTSKSQGC*VGPSGA
Trigger: TGCGCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTT...GCTCGTGGTGGGAATCGTCATCGGTGTCTTGCTACTCACGGCAGCGGCTGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR-3UTR CCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTGGGCCGAAGTCACCCTaGCCGGTGCCAGCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: MPVFQEVSQHERGLTTFAGPKSP*PVPAAS
Trigger: GCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCC...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR-3UTR CCA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACCACCGTCAGGTGGAATaGAGGGACCGGGCTGACGGC +
Preference number: 2 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDHRQVE*RDRADG
Trigger: GCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTG...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR TCA 90 bp CGGCCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAATTAGGAGGGGAAACTaGGGCAGACCACAGGACGGG +
Preference number: 2 (lower is better)
Translates to: RPAHSAGTEVAAPEGRRRIRRGN*GRPQDG
Trigger: CCCGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAAT...TCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR-3UTR GCA 90 bp ACACCGGCAATGGATCAGCAGCGGCAAGGCGGGGCTGTGCCAGTGCAGTGGGGAGTCGGCAGAATTTGCTaGACCGTCAGGTGGAATGGA +
Preference number: 2 (lower is better)
Translates to: TPAMDQQRQGGAVPVQWGVGRIC*TVRWNG
Trigger: TCCATTCCACCTGACGGTGCAGCAAATTCTGCCGAC...TCCCCACTGCACTGGCACAGCCCCGCCTTGCCGCTGCTGATCCATTGCCGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR GCA 90 bp GTCTCATGGGCCCGGGCAGTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACTCTCCCTCCTGGAGCTaGCTCTCTGGCAAGTCGGCA +
Preference number: 2 (lower is better)
Translates to: VSWARAVAKQQAVSLGEDSPSWS*LSGKSA
Trigger: TGCCGACTTGCCAGAGAGGCAGCTCCAGGAGGGAGA...GTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTACTGCCCGGGCCCATGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CCA 90 bp TCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCGCGGCCATCAGCAGTTCTaGCTTCTGCTTTATGTTCAC +
Preference number: 2 (lower is better)
Translates to: SLLGPKSPWPVPAASPFRGHQQF*LLLYVH
Trigger: GTGAACATAAAGCAGAAGCCAGAACTGCTGATGGCC...GCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CCA 90 bp CTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACTGCTGCACCGTCAGGTaGAATGGAGGGACCGGGCTG +
Preference number: 2 (lower is better)
Translates to: LLVTTRRGRIRHCWGRSHCCTVR*NGGTGL
Trigger: CAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCA...GTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR GCA 90 bp TGGTGCTCATCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGCGGAAAAGCCAGGGCTaGTGGGTCGGGCCTTCAGGC +
Preference number: 2 (lower is better)
Translates to: WCSSPLLTVSDDEAWKDPRKSQG*WVGPSG
Trigger: GCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTTCCG...CGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR-3UTR GCA 90 bp TCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCC +
Preference number: 2 (lower is better)
Translates to: SPLLTVSDDEAWKDPSLLSHPGR*QRPAHS
Trigger: GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACT...CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR-3UTR CCA 90 bp GCCCGGGCAGTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCGCAGCAGCAGCAGGATaGAAGATGGTCAGACTCAGG +
Preference number: 2 (lower is better)
Translates to: ARAVAKQQAVSLGEDGHSAAAAG*KMVRLR
Trigger: CCTGAGTCTGACCATCTTCCATCCTGCTGCTGCTGC...GCTATGCCCGTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTACTGCCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CCA 90 bp CAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAATGGAAAAGCCAGGGCTGCTaGGTCGGGCCTTCAGGCGCA +
Preference number: 2 (lower is better)
Translates to: QSSRQSVLVRTGIADNEWKSQGC*VGPSGA
Trigger: TGCGCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTT...CCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CCA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACAGTCGGAATGGCGGATaGTCAGGCGGTGGCTGGAAT +
Preference number: 2 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDSRNGG*SGGGWN
Trigger: ATTCCAGCCACCGCCTGACCATCCGCCATTCCGACT...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR-3UTR TCA 90 bp AGAGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTTACCTCCCGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 2 (lower is better)
Translates to: RDPRPSRHSVPRLIPLPPGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...GGGAGGTAAGGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
3UTR-3UTR GCA 90 bp GAAGACCCGCAGCAGCAGCAGCAGCAGCAGCAGGATGGAAGATGGTCAGACTCACCGCGTGCTGCACAATaGAGCAGTAGTGGTGCTCAT +
Preference number: 2 (lower is better)
Translates to: EDPQQQQQQQQDGRWSDSPRAAQ*SSSGAH
Trigger: ATGAGCACCACTACTGCTGCATTGTGCAGCACGCGG...TGAGTCTGACCATCTTCCATCCTGCTGCTGCTGCTGCTGCTGCTGCGGGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CAA 90 bp TCTTCAGACTCAGTGAGGCCAGAAGCAGCAGGAGACGGAAGGCAGTaGGCCTTGGGAAGGACAAGCCATCAGGTTTTGGGGGCACTGACA +
Preference number: 2 (lower is better)
Translates to: SSDSVRPEAAGDGRQ*ALGRTSHQVLGALT
Trigger: TGTCAGTGCCCCCAAAACCTGATGGCTTGTCCTTCCCAAGGCCAACTGCCTTCCGTCTCCTGCTGCTTCTGGCCTCACTGAGTCTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR TCA 90 bp CCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGCGCTGCAGGTAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCA +
Preference number: 2 (lower is better)
Translates to: PQEPKLQLRRVEGEGAAGSMKGA*LHSLLA
Trigger: TGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCT...ACCTGCAGCGCCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR-3UTR TCA 90 bp CTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 2 (lower is better)
Translates to: LLVTTRRGRIRHCWGRSHGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...GTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR-3UTR TCA 90 bp AGAGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTTACCTCCCATGATGAGAACACACTaGTTCGGGCCCAAACTCGTG +
Preference number: 2 (lower is better)
Translates to: RDPRPSRHSVPRLIPLPPMMRTH*FGPKLV
Trigger: CACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCAT...GGGAGGTAAGGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221466.10
3UTR-3UTR GCA 90 bp GGGAGTCCAAGGCTACATGGCGCTATGACTGTGCCACTGCACTCCACTCCAGTCTATCTTCCTGTGTCGTaGTCACAGCCACGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: GSPRLHGAMTVPLHSTPVYLPVS*SQPRAF
Trigger: GAAGGCACGTGGCTGTGAGCACGACACAGGAAGATA...GACTGGAGTGGAGTGCAGTGGCACAGTCATAGCGCCATGTAGCCTTGGACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CCA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACTCAGGAAGGGTAAGGTaGGAGGATCGCTTGAGCTTG +
Preference number: 2 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDSGRVR*EDRLSL
Trigger: CAAGCTCAAGCGATCCTCCCACCTTACCCTTCCTGA...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR-3UTR TCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTATTAGGAGGGGAAACTaGGGCAGACCACAGGACGGG +
Preference number: 2 (lower is better)
Translates to: MPVFQEVSQHERGLTTFAIRRGN*GRPQDG
Trigger: CCCGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAAT...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
3UTR-3UTR TCA 90 bp AGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAATGGTCAGATGGCTACATGGCGCTATaGCTGTGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: SRQSVLVRTGIADNEWSDGYMAL*LCHCTP
Trigger: TGGAGTGCAGTGGCACAGTCATAGCGCCATGTAGCC...ATCTGACCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CCA 90 bp AAGACCCGCAGCAGCAGCAGCAGCAGCAGCAGGATGGAAGATGGTCAGACTCAGATCGTGGGTCTTGGCTaGGATCTTGGTTTTGGTTGC +
Preference number: 2 (lower is better)
Translates to: KTRSSSSSSSRMEDGQTQIVGLG*DLGFGC
Trigger: GCAACCAAAACCAAGATCCCAGCCAAGACCCACGAT...CTGAGTCTGACCATCTTCCATCCTGCTGCTGCTGCTGCTGCTGCTGCGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR TCA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCA +
Preference number: 2 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQSMKGA*LHSLLA
Trigger: TGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCT...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
3UTR-3UTR GCA 90 bp GTCTCATGGGCCCGGGCAGTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACAGAAAACACATTTGCTaGTTCAGGAAAGCACAGCAG +
Preference number: 2 (lower is better)
Translates to: VSWARAVAKQQAVSLGEDRKHIC*FRKAQQ
Trigger: CTGCTGTGCTTTCCTGAAGCAGCAAATGTGTTTTCT...GTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTACTGCCCGGGCCCATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CAA 90 bp GTCTTGGCTGGGATCTTGGTTTTGGTTGCTCAGCAGAAAACACATTaGCTGCTTCAGGAAAGCACAGCAGCTTCTCCCTCCTGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: VLAGILVLVAQQKTH*LLQESTAASPSWSC
Trigger: GCAGCTCCAGGAGGGAGAAGCTGCTGTGCTTTCCTGAAGCAGCAAATGTGTTTTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR GCA 90 bp TCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGCAAGTCGGCAGAATTTaGTGCACCGTCAGGTGGAAT +
Preference number: 2 (lower is better)
Translates to: SPLLTVSDDEAWKDPSLLQVGRI*CTVRWN
Trigger: ATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTG...CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CAA 90 bp GAGGGTGGATCTGGGCAATCGTGGGTCTTGGCTGGGATCTTGGTTTaGGTTGCTCAGCAGAAAACACATTTGCTGCTTCAGGAAAGCACA +
Preference number: 2 (lower is better)
Translates to: EGGSGQSWVLAGILV*VAQQKTHLLLQEST
Trigger: TGTGCTTTCCTGAAGCAGCAAATGTGTTTTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CAA 90 bp TTCAGGGAGGGTGGATCTGGGCAATCGTGGGTCTTGGCTGGGATCTaGGTTTTGGTTGCTCAGCAGAAAACACATTTGCTGCTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: FREGGSGQSWVLAGI*VLVAQQKTHLLLQE
Trigger: TTCCTGAAGCAGCAAATGTGTTTTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CCA 90 bp GTCTTGGTGAGGACGGGCATAGCAGACAACGAATGGTCAGATTCCAGGAAGACCTCTTGGCTGGGATCTTaGTTTTGGTTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: VLVRTGIADNEWSDSRKTSWLGS*FWLLSR
Trigger: TCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGA...GGTCTTCCTGGAATCTGACCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR TCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCA +
Preference number: 2 (lower is better)
Translates to: GGKQPYVLGGETEADHRTSMKGA*LHSLLA
Trigger: TGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCT...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
3UTR-3UTR TCA 90 bp GTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 2 (lower is better)
Translates to: VLYYRGGKQPYVLGGETEGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...CTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
3UTR-3UTR TCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 2 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGEGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
3UTR-3UTR TCA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCA +
Preference number: 2 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLSMKGA*LHSLLA
Trigger: TGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCT...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000599988.5
3UTR-3UTR TCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCA +
Preference number: 2 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGESMKGA*LHSLLA
Trigger: TGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCT...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
3UTR CCA 72 bp TGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTaGCCGGTGCCAGCGGCCAGCCCATTCCGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: WKDPSLLGPKSP*PVPAASPFRRN
Trigger: GTTCCTGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR GCA 72 bp ATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCCGCAGGAACCGAAGTT +
Preference number: 3 (lower is better)
Translates to: IRHCWGRSHPGR*QRPAHSAGTEV
Trigger: AACTTCGGTTCCTGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR CCA 72 bp TTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTaGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCA +
Preference number: 3 (lower is better)
Translates to: LVTTRRGRIRHC*GRSHPGRCQRP
Trigger: TGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR GCA 72 bp CTGGAGCTGCCTCTCTGGCAAGTCGGCAGAATTTGCTaGACCGTCAGGTGGAATGGAGGGACCGGGCTGACG +
Preference number: 3 (lower is better)
Translates to: LELPLWQVGRIC*TVRWNGGTGLT
Trigger: CGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR GCA 72 bp CTCCTGGAGCTGCCTCTCTGGCAAGTCGGCAGAATTTaGTGCACCGTCAGGTGGAATGGAGGGACCGGGCTG +
Preference number: 3 (lower is better)
Translates to: LLELPLWQVGRI*CTVRWNGGTGL
Trigger: CAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 72 bp GCAAGTCGGCAGAATTTGCTGCACCGTCAGGTGGAATaGAGGGACCGGGCTGACGGCCATCAGCAGTTCTGG +
Preference number: 3 (lower is better)
Translates to: ASRQNLLHRQVE*RDRADGHQQFW
Trigger: CCAGAACTGCTGATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 72 bp CTCTGGCAAGTCGGCAGAATTTGCTGCACCGTCAGGTaGAATGGAGGGACCGGGCTGACGGCCATCAGCAGT +
Preference number: 3 (lower is better)
Translates to: LWQVGRICCTVR*NGGTGLTAISS
Trigger: ACTGCTGATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR TCA 72 bp GAGGAAGGTCAGACTCAGGAAGGACCGGCGCAGCAGTaGGACAAGGCAACGGGAAACCAGGAGCATCACCAC +
Preference number: 3 (lower is better)
Translates to: EEGQTQEGPAQQ*DKATGNQEHHH
Trigger: GTGGTGATGCTCCTGGTTTCCCGTTGCCTTGTCTCACTGCTGCGCCGGTCCTTCCTGAGTCTGACCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CAA 90 bp CCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGGCAAGTCGGCAGAATTaGCTGCACCGTCAGGTGGAA +
Preference number: 3 (lower is better)
Translates to: PAHSAGTEVAAPEGRRRRASRQN*LHRQVE
Trigger: TTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGC...CCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR TCA 72 bp CCCGGTGTCGTCTCCACGAAGGGAGATCCAAGGGGCTaGGGAGAGAGAGAGAGGGAGAGGTCATCAGAATCT +
Preference number: 3 (lower is better)
Translates to: PGVVSTKGDPRG*GERERERSSES
Trigger: AGATTCTGATGACCTCTCCCTCTCTCTCTCTCCTCAGCCCCTTGGATCTCCCTTCGTGGAGACGACACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR GCA 72 bp CTTCAGGAAAGCACAGCAGCTTCTCCCTCCTGGAGCTaGCTCTCTGGCAAGTCGGCAGAATTTGCTGCACCG +
Preference number: 3 (lower is better)
Translates to: LQESTAASPSWS*LSGKSAEFAAP
Trigger: CGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAGGAGGGAGAAGCTGCTGTGCTTTCCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CAA 90 bp TTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGTCTTGGCTGGGATCTaGGTTTTGGTTGCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: LVTTRRGRIRHCWGRSHPVLAGI*VLVAQQ
Trigger: CTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGAC...AGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CAA 90 bp AGGACAAGCCATCAGGTTTTGGGGGCACTGACAGGCGTGAGGTTCAAGGCAGTCGGGCAATCGTGGGTCTaGGCTGGGATCTTGGTTTTG +
Preference number: 3 (lower is better)
Translates to: RTSHQVLGALTGVRFKAVGQSWV*AGILVL
Trigger: CAAAACCAAGATCCCAGCCAAGACCCACGATTGCCC...GACTGCCTTGAACCTCACGCCTGTCAGTGCCCCCAAAACCTGATGGCTTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR TCA 72 bp TTTGCTGCACCGTCAGGTGGAATGGAGGGACCGGGCTaGCGGCCATCAGCAGTTCTGGCTTCTGCTTTATGT +
Preference number: 3 (lower is better)
Translates to: FAAPSGGMEGPG*RPSAVLASALC
Trigger: ACATAAAGCAGAAGCCAGAACTGCTGATGGCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 72 bp TCATCGCCACTTTTGACTGTTAGTGACGACGAGGCGTaGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCC +
Preference number: 3 (lower is better)
Translates to: SSPLLTVSDDEA*KDPSLLGPKSP
Trigger: GGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR CCA 72 bp TCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAATaGTCAGATTCCAGGAAGACCCGCAGCAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: SVLVRTGIADNE*SDSRKTRSSSS
Trigger: GCTGCTGCTGCTGCGGGTCTTCCTGGAATCTGACCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 72 bp ACTGGGCATTACTGCCCAAGTTCCTTTCAGGGAGGGTaGATCTGGGCAATCGTGGGTCTTGGCTGGGATCTT +
Preference number: 3 (lower is better)
Translates to: TGHYCPSSFQGG*IWAIVGLGWDL
Trigger: AAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAAAGGAACTTGGGCAGTAATGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CAA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACGCTGGGATCTTGGTTTaGGTTGCTCAGCAGAAAACA +
Preference number: 3 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDAGILV*VAQQKT
Trigger: TGTTTTCTGCTGAGCAACCAAAACCAAGATCCCAGC...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR TCA 72 bp GCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTaGCTGTTAGTGACGACGAGGCGTGGAAGGATCCGT +
Preference number: 3 (lower is better)
Translates to: AQCSSSGAHRHF*LLVTTRRGRIR
Trigger: ACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR CCA 72 bp CAAGTTCCTTTCAGGGAGGGTGGATCTGGGCAATCGTaGGTCTTGGCTGGGATCTTGGTTTTGGTTGCTCAG +
Preference number: 3 (lower is better)
Translates to: QVPFREGGSGQS*VLAGILVLVAQ
Trigger: CTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAAAGGAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CAA 90 bp AAGACCCGCAGCAGCAGCAGCAGCAGCAGCAGGATGGAAGATGGTCAGACTCAGCAGCAGAAAACACATTaGCTGCTTCAGGAAAGCACA +
Preference number: 3 (lower is better)
Translates to: KTRSSSSSSSRMEDGQTQQQKTH*LLQEST
Trigger: TGTGCTTTCCTGAAGCAGCAAATGTGTTTTCTGCTG...CTGAGTCTGACCATCTTCCATCCTGCTGCTGCTGCTGCTGCTGCTGCGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR TCA 72 bp CAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCAGTCGGAATGGCGGAT +
Preference number: 3 (lower is better)
Translates to: QCSRRSHSMKGA*LHSLLAVGMAD
Trigger: ATCCGCCATTCCGACTGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
3UTR CCA 72 bp CTTTCAGGGAGGGTGGATCTGGGCAATCGTGGGTCTTaGCTGGGATCTTGGTTTTGGTTGCTCAGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: LSGRVDLGNRGS*LGSWFWLLSRK
Trigger: TTTTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CCA 72 bp CATTACTGCCCAAGTTCCTTTCAGGGAGGGTGGATCTaGGCAATCGTGGGTCTTGGCTGGGATCTTGGTTTT +
Preference number: 3 (lower is better)
Translates to: HYCPSSFQGGWI*AIVGLGWDLGF
Trigger: AAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAAAGGAACTTGGGCAGTAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR-3UTR CAA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTTGCTCATCGCCACTTTaGACTGTTAGTGACGACGAG +
Preference number: 3 (lower is better)
Translates to: MPVFQEVSQHERGLTTFACSSPL*TVSDDE
Trigger: CTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCA...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR CCA 72 bp CTGACTACATTCGCTTTTAGCAGTCGGAATGGCGGATaGTCAGGCGGTGGCTGGAATCACATTTACATCCTT +
Preference number: 3 (lower is better)
Translates to: LTTFAFSSRNGG*SGGGWNHIYIL
Trigger: AAGGATGTAAATGTGATTCCAGCCACCGCCTGACCATCCGCCATTCCGACTGCTAAAAGCGAATGTAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR TCA 90 bp TCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCGCCACCCAGCTCCACCCTaGGGGGCTGCGCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLLGPKSPWPVPAASPFRHPAPP*GAAPAP
Trigger: CGGGGCTGGCGCAGCCCCTCAGGGTGGAGCTGGGTG...GCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp GGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCACGCTCCCTTCCTGCCTaGGGCCCTGGCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GRIRHCWGRSHPGRCQRPRSLPA*GPGRLL
Trigger: CAGGAGCCGGCCAGGGCCGCAGGCAGGAAGGGAGCG...TGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR TCA 90 bp CCGGTGCCAGCGGCCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTGCTGCTGCCACCGCTaGCTGATAGCCAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PVPAASPFRRNRSCSSGGCCCHR*LIARAS
Trigger: CGAGGCCCTGGCTATCAGTCAGCGGTGGCAGCAGCA...CCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCGCTGGCACCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR GCA 90 bp CCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGCGCTGCAGGTGCCTCGCTCCCTTCCTaGCTGCGGCCCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PQEPKLQLRRVEGEGAAGASLPS*LRPWPA
Trigger: AGCCGGCCAGGGCCGCAGGCAGGAAGGGAGCGAGGC...ACCTGCAGCGCCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR GCA 90 bp GCGCCAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTCCACCCTGAGGGGCTaGGCCAGCCCCGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: APAPRAAQCSSSGAHRHFSTLRG*ASPACC
Trigger: GCAGCACGCGGGGCTGGCGCAGCCCCTCAGGGTGGA...AAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR GCA 90 bp CCTGTAGGAGAGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTCGCTCCCTTCCTGCCTaGGGCCCTGGCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PVGEIRGPAAIQSPDLFPRSLPA*GPGRLL
Trigger: CAGGAGCCGGCCAGGGCCGCAGGCAGGAAGGGAGCG...AGGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCTCTCCTACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR GCA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACGCCTCGCTCCCTTCCTaGCTGCGGCCCTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHASLPS*LRPWPA
Trigger: AGCCGGCCAGGGCCGCAGGCAGGAAGGGAGCGAGGC...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000598927.5
CDS-3UTR GCA 90 bp ACCTGTAGGAGAGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTCCACCCTGAGGGGCTaGGCCAGCCCCGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TCRRDPRPSRHSVPRLIPSTLRG*ASPACC
Trigger: GCAGCACGCGGGGCTGGCGCAGCCCCTCAGGGTGGA...GGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCTCTCCTACAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp GAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCGTTCAGGGCGAACTTaGCGGTGGGCACCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: EGSVTVGAEVTLAGASGQRSGRT*RWAPRC
Trigger: ACACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACG...CTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
3UTR CAA 72 bp GTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTaGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: VSDDEAWKDPSL*GPKSPWPVPAA
Trigger: GGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR TCA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACATTCCAGCTCCACCCTaGGGGGCTGCGCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHIPAPP*GAAPAP
Trigger: CGGGGCTGGCGCAGCCCCTCAGGGTGGAGCTGGAAT...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR TCA 90 bp GTAGAAGGAGAAGGCGCTGCAGGTAAGCACGGAAAAGCCAGGGCTGCTGGGTCGATTCCAGCTCCACCCTaGGGGGCTGCGCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: VEGEGAAGKHGKARAAGSIPAPP*GAAPAP
Trigger: CGGGGCTGGCGCAGCCCCTCAGGGTGGAGCTGGAAT...CGACCCAGCAGCCCTGGCTTTTCCGTGCTTACCTGCAGCGCCTTCTCCTTCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR TCA 90 bp ACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCGCGGGACCCCCATGCTaGGAGGACGACCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TRPRTPSGGSEMPVFQEVAGPPC*EDDLGR
Trigger: CCGCCCCAGGTCGTCCTCTCAGCATGGGGGTCCCGC...GACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426395.7
ENST00000599988.5
CDS-3UTR GCA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGTCCACCCTGAGGGGCTaGGCCAGCCCCGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRSTLRG*ASPACC
Trigger: GCAGCACGCGGGGCTGGCGCAGCCCCTCAGGGTGGA...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAGGGCCGAAGTCACCCTaGCCGGTGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSGPKSP*PVPAAS
Trigger: GCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCC...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp TTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGGCCGAAGTCACCCTaGCCGGTGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LVTTRRGRIRHCWGRSHPGPKSP*PVPAAS
Trigger: GCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCC...AGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CCA 90 bp GGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCACAGGGAGGGTGGATCTaGGCAATCGTGGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GRIRHCWGRSHPGRCQRPQGGWI*AIVGLG
Trigger: GCCAAGACCCACGATTGCCCAGATCCACCCTCCCTG...TGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
3UTR CAA 72 bp GGTGCCAGCGGCCAGCCCATTCCGCAGGAACCGAAGTaGCAGCTCCGGAGGGTAGAAGGAGAAGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GASGQPIPQEPK*QLRRVEGEGAA
Trigger: TGCAGCGCCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCGCTGGCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR GCA 90 bp GTAGAAGGAGAAGGCGCTGCAGGTAAGCACGGAAAAGCCAGGGCTGCTGGGTCGGCGGGGCTGTGCCAGTaGAGTGGGGAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VEGEGAAGKHGKARAAGSAGLCQ*SGERQA
Trigger: TGCCTGCCTCTCCCCACTGCACTGGCACAGCCCCGC...CGACCCAGCAGCCCTGGCTTTTCCGTGCTTACCTGCAGCGCCTTCTCCTTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp ACACCGGCAATGGATCAGCAGCGGCAAGGCGGGGCTGTGCCAGTGCAGTGGGGAGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TPAMDQQRQGGAVPVQWGDTAVR*YRRERW
Trigger: CCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTC...TCCCCACTGCACTGGCACAGCCCCGCCTTGCCGCTGCTGATCCATTGCCGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGGGCCGAAGTCACCCTaGCCGGTGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQGPKSP*PVPAAS
Trigger: GCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCC...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR TCA 90 bp GGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGTAGCAAGACACCGATaGCGATTCCCACCACGAGCA +
Preference number: 4 (lower is better)
Translates to: GRIRHCWGRSHPGRCQRPVARHR*RFPPRA
Trigger: TGCTCGTGGTGGGAATCGTCATCGGTGTCTTGCTAC...TGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR GCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSSHPGR*QRPAHS
Trigger: GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACT...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR GCA 90 bp ACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: TRPRTPSGGSEMPVFQEVSHPGR*QRPAHS
Trigger: GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACT...GACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR GCA 90 bp GCTGAGGCGGGAGGATCTCTTGAGCTTGGGAGTCCAAGGCTACATGGCGCTATGAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: AEAGGSLELGSPRLHGAMSHPGR*QRPAHS
Trigger: GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACT...CATAGCGCCATGTAGCCTTGGACTCCCAAGCTCAAGAGATCCTCCCGCCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRSHPGR*QRPAHS
Trigger: GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACT...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR GCA 90 bp GTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGATCCACCCTGAGGGGCTaGGCCAGCCCCGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VAKQQAVSLGEDGHSRQRSTLRG*ASPACC
Trigger: GCAGCACGCGGGGCTGGCGCAGCCCCTCAGGGTGGA...TCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp CGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCGTCGGCAGAATTTGCTaGACCGTCAGGTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: RHCWGRSHPGRCQRPAHSVGRIC*TVRWNG
Trigger: TCCATTCCACCTGACGGTGCAGCAAATTCTGCCGAC...GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp CGGCCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGAGCATCACCACCTaGCGGGACCTCACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RPAHSAGTEVAAPEGRRRRSITT*RDLTQL
Trigger: GAGCTGGGTGAGGTCCCGCCAGGTGGTGATGCTCCT...TCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp GCGCCAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGCTGCACCGTCAGGTaGAATGGAGGGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: APAPRAAQCSSSGAHRHFCCTVR*NGGTGL
Trigger: CAGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCA...AAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp GAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGGGATCTGGGCAATCGTaGGTCTTGGCTGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: EGSVTVGAEVTLAGASGQGSGQS*VLAGIL
Trigger: CAAGATCCCAGCCAAGACCCACGATTGCCCAGATCC...CTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp GCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACAGCGGGACCCCCATGCTaGGAGGACGACGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AQNPFWRLRDASVPGGLTAGPPC*EDDVPF
Trigger: GAAGGGAACGTCGTCCTCTCAGCATGGGGGTCCCGC...TGTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000598927.5
CDS-3UTR TCA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGTGCTGCTGCCACCGCTaGCTGATAGCCAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRCCCHR*LIARAS
Trigger: CGAGGCCCTGGCTATCAGTCAGCGGTGGCAGCAGCA...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR GCA 90 bp GCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACATGCTCCCGCAGGCGGTaGGGGCAGGAGAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: AQNPFWRLRDASVPGGLTCSRRR*GQENSR
Trigger: CCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCA...TGTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR GCA 90 bp CCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGCGCTGCAGGTTCTCCCTCCTGGAGCTaGCTCTCTGGCAAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PQEPKLQLRRVEGEGAAGSPSWS*LSGKSA
Trigger: TGCCGACTTGCCAGAGAGGCAGCTCCAGGAGGGAGA...ACCTGCAGCGCCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp ACCTGTAGGAGAGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCGGGCGAACTTGGCGGTaGGCACCGAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: TCRRDPRPSRHSVPRLIPGRTWR*APRCCQ
Trigger: CTGACAACACCTCGGTGCCCACCGCCAAGTTCGCCC...GGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCTCTCCTACAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp CCAAGGCTACATGGCGCTATGACTGTGCCACTGCACTCCACTCCAGTCTGGGCGGGGCGAACTTGGCGGTaGGCACCGAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: PRLHGAMTVPLHSTPVWAGRTWR*APRCCQ
Trigger: CTGACAACACCTCGGTGCCCACCGCCAAGTTCGCCC...CGCCCAGACTGGAGTGGAGTGCAGTGGCACAGTCATAGCGCCATGTAGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp AGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTTACCTCCCCTCGTTCAGGGCGAACTTaGCGGTGGGCACCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RSEAQPPFSPPTYSLTSPRSGRT*RWAPRC
Trigger: ACACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACG...AGGGGAGGTAAGGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACCGTTCAGGGCGAACTTaGCGGTGGGCACCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHRSGRT*RWAPRC
Trigger: ACACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACG...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CCA 90 bp GTCTCATGGGCCCGGGCAGTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACCGTTCAGGGCGAACTTaGCGGTGGGCACCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: VSWARAVAKQQAVSLGEDRSGRT*RWAPRC
Trigger: ACACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACG...GTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTACTGCCCGGGCCCATGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp CACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCGCAAAGCAGGAGAATCGCTaGAGCCTAGGAGTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: HCWGRSHPGRCQRPAHSAKQENR*SLGVQD
Trigger: GTCTTGAACTCCTAGGCTCCAGCGATTCTCCTGCTT...TGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
3UTR CAA 72 bp CCTCCTGGAGCTGCCTCTCTGGCAAGTCGGCAGAATTaGCTGCACCGTCAGGTGGAATGGAGGGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: PPGAASLASRQN*LHRQVEWRDRA
Trigger: AGCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGGCGGGACCCCCATGCTaGGAGGACGACCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTAGPPC*EDDLGR
Trigger: CCGCCCCAGGTCGTCCTCTCAGCATGGGGGTCCCGC...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000426395.7
ENST00000599988.5
CDS-3UTR TCA 90 bp GTAGAAGGAGAAGGCGCTGCAGGTAAGCACGGAAAAGCCAGGGCTGCTGGGTCGGGAGATCCAAGGGGCTaGGGAGAGAGAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VEGEGAAGKHGKARAAGSGDPRG*GERERE
Trigger: CTCCCTCTCTCTCTCTCCTCAGCCCCTTGGATCTCC...CGACCCAGCAGCCCTGGCTTTTCCGTGCTTACCTGCAGCGCCTTCTCCTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR TCA 90 bp CTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACATGGAGGGACCGGGCTaGCGGCCATCAGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLVTTRRGRIRHCWGRSHMEGPG*RPSAVL
Trigger: CAGAACTGCTGATGGCCGTCAGCCCGGTCCCTCCAT...GTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGTGCTCCCGCAGGCGGTaGGGGCAGGAGAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQCSRRR*GQENSR
Trigger: CCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCA...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR GCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGTCCACCCTGAGGGGCTaGGCCAGCCCCGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTSTLRG*ASPACC
Trigger: GCAGCACGCGGGGCTGGCGCAGCCCCTCAGGGTGGA...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp AGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTTACCTCCCCTCCTGGCTCCCGTGACTaGAGACCCCAGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RSEAQPPFSPPTYSLTSPPGSRD*RPQFLS
Trigger: AGAGAGGAACTGGGGTCTCCAGTCACGGGAGCCAGG...AGGGGAGGTAAGGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGGGGCGAACTTGGCGGTaGGCACCGAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRGRTWR*APRCCQ
Trigger: CTGACAACACCTCGGTGCCCACCGCCAAGTTCGCCC...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAGGGCGAACTTGGCGGTaGGCACCGAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSGRTWR*APRCCQ
Trigger: CTGACAACACCTCGGTGCCCACCGCCAAGTTCGCCC...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CCA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGAAAAGCCAGGGCTGCTaGGTCGGGCCTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRKSQGC*VGPSGA
Trigger: TGCGCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTT...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACAAAAGCCAGGGCTGCTaGGTCGGGCCTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDKSQGC*VGPSGA
Trigger: TGCGCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTT...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CCA 90 bp TTCAGCAAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGTGCCTTCAGCCTGGGCCGAAGTCACCCTaGCCGGTGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSKSVSSCVVLTATCLQPGPKSP*PVPAAS
Trigger: GCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCC...AGGCTGAAGGCACGTGGCTGTGAGCACGACACAGGAAGATACAGATTTGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp GGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAATCGTGGGTCTTGGCTaGGATCTTGGTTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GRIRHCWGRSHPGRCQRPIVGLG*DLGFGC
Trigger: GCAACCAAAACCAAGATCCCAGCCAAGACCCACGAT...TGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp GTAGAAGGAGAAGGCGCTGCAGGTAAGCACGGAAAAGCCAGGGCTGCTGGGTCGGGCTACATGGCGCTATaGCTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VEGEGAAGKHGKARAAGSGYMAL*LCHCTP
Trigger: TGGAGTGCAGTGGCACAGTCATAGCGCCATGTAGCC...CGACCCAGCAGCCCTGGCTTTTCCGTGCTTACCTGCAGCGCCTTCTCCTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGCTTGGCTGGAGATTCTaGGCCCAGGCTCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRLGWRF*AQAPRK
Trigger: CTTCCTGGGAGCCTGGGCGCAGAATCTCCAGCCAAG...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599988.5
CDS-3UTR CCA 90 bp CTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCTCCCGTGACTaGAGACCCCAGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLVTTRRGRIRHCWGRSHPGSRD*RPQFLS
Trigger: AGAGAGGAACTGGGGTCTCCAGTCACGGGAGCCAGG...GTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR CCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAAGGATCCGTCACTGTTaGGGCCGAAGTCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSRIRHC*GRSHPG
Trigger: GCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCT...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACCGAGCACGGAGGACTTaGCTGGAGATTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHRARRT*LEIPAP
Trigger: TGGAGCTGGAATCTCCAGCCAAGTCCTCCGTGCTCG...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAGGAGATCCAAGGGGCTaGCAGCCCACTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSGDPRG*QPTPHP
Trigger: AGGATGAGGAGTGGGCTGCCAGCCCCTTGGATCTCC...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000599988.5
CDS-3UTR CCA 90 bp CGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGGCTGAGAGGACGACCTaGGGCGGGAGGGGGCACGTG +
Preference number: 4 (lower is better)
Translates to: RGGKQPYVLGGETEADHRAERTT*GGRGHV
Trigger: CACGTGCCCCCTCCCGCCCCAGGTCGTCCTCTCAGC...CCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426395.7
ENST00000599988.5
CDS-3UTR TCA 90 bp TCTGGCAAGTCGGCAGAATTTGCTGCACCGTCAGGTGGAATGGAGGGACCGGGCAGAATAGCAGGAAGGTaGGCTCCTTGTTGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SGKSAEFAAPSGGMEGPGRIAGR*APCWPP
Trigger: AGGCGGCCAACAAGGAGCTCACCTTCCTGCTATTCT...GCCCGGTCCCTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp AGAGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTTACCTCCCGTAGCAAGACACCGATaGCGATTCCCACCACGAGCA +
Preference number: 4 (lower is better)
Translates to: RDPRPSRHSVPRLIPLPPVARHR*RFPPRA
Trigger: TGCTCGTGGTGGGAATCGTCATCGGTGTCTTGCTAC...GGGAGGTAAGGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR TCA 90 bp ACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCATTAGGAGGGGAAACTaGGGCAGACCACAGGACGGG +
Preference number: 4 (lower is better)
Translates to: TRPRTPSGGSEMPVFQEVIRRGN*GRPQDG
Trigger: CCCGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAAT...GACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR TCA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGATTAGGAGGGGAAACTaGGGCAGACCACAGGACGGG +
Preference number: 4 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRIRRGN*GRPQDG
Trigger: CCCGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAAT...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR GCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTCGGAAAAGCCAGGGCTaGTGGGTCGGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: MPVFQEVSQHERGLTTFARKSQG*WVGPSG
Trigger: GCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTTCCG...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR GCA 90 bp CGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCAAAGATTTCAGCAACTaGCTAGGACTGGGCATTACT +
Preference number: 4 (lower is better)
Translates to: RHCWGRSHPGRCQRPAHSKDFSN*LGLGIT
Trigger: AGTAATGCCCAGTCCTAGGCAGTTGCTGAAATCTTT...GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQDTAVR*YRRERW
Trigger: CCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTC...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGAGGATCCGTCACTGTTaGGGCCGAAGTCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQRIRHC*GRSHPG
Trigger: GCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCT...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp GCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACACACGGAGGACTTGGCTaGAGATTCCAGCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: AQNPFWRLRDASVPGGLTHGGLG*RFQLHP
Trigger: AGGGTGGAGCTGGAATCTCCAGCCAAGTCCTCCGTG...TGTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp CTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACAGTCGGAATGGCGGATaGTCAGGCGGTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLVTTRRGRIRHCWGRSHSRNGG*SGGGWN
Trigger: ATTCCAGCCACCGCCTGACCATCCGCCATTCCGACT...GTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR CCA 90 bp GTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGACGGTCACACCGGCAATaGATCAGCAGCGGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: VAKQQAVSLGEDGHSRQRRSHRQ*ISSGKA
Trigger: CGCCTTGCCGCTGCTGATCCATTGCCGGTGTGACCG...TCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAGTAGCAAGACACCGATaGCGATTCCCACCACGAGCA +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSVARHR*RFPPRA
Trigger: TGCTCGTGGTGGGAATCGTCATCGGTGTCTTGCTAC...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
ENST00000599988.5
CDS-3UTR TCA 90 bp AGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTTACCTCCCCTGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 4 (lower is better)
Translates to: RSEAQPPFSPPTYSLTSPGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...AGGGGAGGTAAGGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR TCA 90 bp CCTACAGCCGCTGCCGTGAGTAGCAAGACACCGATGACGATTCCCACCACGAGCGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 4 (lower is better)
Translates to: PTAAAVSSKTPMTIPTTSGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...GCTCGTGGTGGGAATCGTCATCGGTGTCTTGCTACTCACGGCAGCGGCTGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR TCA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACTGCCCTCCTCGTACCTaGAGAACTTTCACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHCPPRT*RTFTPE
Trigger: TTCAGGGGTGAAAGTTCTTCAGGTACGAGGAGGGCA...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426395.7
CDS-3UTR TCA 90 bp AGCAGACAACGAATGGTCAGATTCCAGGAAGACCCGCAGCAGCAGCAGCAGCAGGCTCTTCAGACTCAGTaGGGCCAGAAGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SRQRMVRFQEDPQQQQQQALQTQ*GQKQQE
Trigger: CTCCTGCTGCTTCTGGCCTCACTGAGTCTGAAGAGC...CTGCTGCTGCTGCTGCTGCGGGTCTTCCTGGAATCTGACCATTCGTTGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGCCACCCCAGGTGCCCTaGTTGAGGTCGAAATTCATG +
Preference number: 4 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRPPQVP*LRSKFM
Trigger: CATGAATTTCGACCTCAAGCAGGGCACCTGGGGTGG...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR GCA 90 bp AAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGTGCCTTCAGCCTCAAGGTTGCTCCCGCAGGCGGTaGGGGCAGGAGAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: KSVSSCVVLTATCLQPQGCSRRR*GQENSR
Trigger: CCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCA...ACCTTGAGGCTGAAGGCACGTGGCTGTGAGCACGACACAGGAAGATACAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGCCGCGTGCTGCACAATaGAGCAGTAGTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRPRAAQ*SSSGAH
Trigger: ATGAGCACCACTACTGCTGCATTGTGCAGCACGCGG...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR GCA 90 bp GCTGAGGCGGGAGGATCTCTTGAGCTTGGGAGTCCAAGGCTACATGGCGCTATGCCGCGTGCTGCACAATaGAGCAGTAGTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: AEAGGSLELGSPRLHGAMPRAAQ*SSSGAH
Trigger: ATGAGCACCACTACTGCTGCATTGTGCAGCACGCGG...CATAGCGCCATGTAGCCTTGGACTCCCAAGCTCAAGAGATCCTCCCGCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp CGGCCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGACTGGGCATTACTaGCCAAGTTCCTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPAHSAGTEVAAPEGRRRRTGHY*PSSFQG
Trigger: TCCCTGAAAGGAACTTGGGCAGTAATGCCCAGTCCT...TCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp TCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGAAAAGCCAGGGCTGCTaGGTCGGGCCTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SPLLTVSDDEAWKDPSLLKSQGC*VGPSGA
Trigger: TGCGCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTT...CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CCA 90 bp TTTCAGCAAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGTGCCTTCAGCCCACCGTCAGGTGGAATaGAGGGACCGGGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: FQQICIFLCRAHSHVPSAHRQVE*RDRADG
Trigger: GCCGTCAGCCCGGTCCCTCCATTCCACCTGACGGTG...GGCTGAAGGCACGTGGCTGTGAGCACGACACAGGAAGATACAGATTTGCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACCTGGAGCTGCCTCTCTaGCAAGTCGGCAGAATTTGC +
Preference number: 4 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDLELPL*QVGRIC
Trigger: GCAAATTCTGCCGACTTGCCAGAGAGGCAGCTCCAG...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACTCCTTTCAGGGAGGGTaGATCTGGGCAATCGTGGGT +
Preference number: 4 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDSFQGG*IWAIVG
Trigger: ACCCACGATTGCCCAGATCCACCCTCCCTGAAAGGA...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp GGCAAAGATTTCAGCAACTGCCTAGGACTGGGCATTACTGCCCAAGTTCCTTTCTGCTGCTGCCACCGCTaGCTGATAGCCAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GKDFSNCLGLGITAQVPFCCCHR*LIARAS
Trigger: CGAGGCCCTGGCTATCAGTCAGCGGTGGCAGCAGCA...GAAAGGAACTTGGGCAGTAATGCCCAGTCCTAGGCAGTTGCTGAAATCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGGCTCATCGCCACTTTTaGCTGTTAGTGACGACGAGG +
Preference number: 4 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRAHRHF*LLVTTR
Trigger: CCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGC...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR TCA 90 bp AAGACCCGCAGCAGCAGCAGCAGCAGCAGCAGGATGGAAGATGGTCAGACTCAGGCTCATCGCCACTTTTaGCTGTTAGTGACGACGAGG +
Preference number: 4 (lower is better)
Translates to: KTRSSSSSSSRMEDGQTQAHRHF*LLVTTR
Trigger: CCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGC...CTGAGTCTGACCATCTTCCATCCTGCTGCTGCTGCTGCTGCTGCTGCGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp GCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACAGCTCATCGCCACTTTTaGCTGTTAGTGACGACGAGG +
Preference number: 4 (lower is better)
Translates to: AQNPFWRLRDASVPGGLTAHRHF*LLVTTR
Trigger: CCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGC...TGTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR TCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR TCA 90 bp TTCAGCAAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGTGCCTTCAGCCTGGACCGGCGCAGCAGTaGGACAAGGCAACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FSKSVSSCVVLTATCLQPGPAQQ*DKATGN
Trigger: GTTTCCCGTTGCCTTGTCTCACTGCTGCGCCGGTCC...AGGCTGAAGGCACGTGGCTGTGAGCACGACACAGGAAGATACAGATTTGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp ATGGCGGATGGTCAGGCGGTGGCTGGAATCACATTTACATCCTTCAAATCAGCACGGAAAAGCCAGGGCTaGTGGGTCGGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: MADGQAVAGITFTSFKSARKSQG*WVGPSG
Trigger: GCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTTCCG...TGCTGATTTGAAGGATGTAAATGTGATTCCAGCCACCGCCTGACCATCCGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR GCA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGCCGCGTGCTGCACAATaGAGCAGTAGTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQPRAAQ*SSSGAH
Trigger: ATGAGCACCACTACTGCTGCATTGTGCAGCACGCGG...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR GCA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACTATCTTCCTGTGTCGTaGTCACAGCCACGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDYLPVS*SQPRAF
Trigger: GAAGGCACGTGGCTGTGAGCACGACACAGGAAGATA...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp GTGAACTCTAATCCCGCTACTGCACTCCAGTCTAGGCAACAGTGCAAGTGCCTGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VNSNPATALQSRQQCKCLDTAVR*YRRERW
Trigger: CCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTC...CAGGCACTTGCACTGTTGCCTAGACTGGAGTGCAGTAGCGGGATTAGAGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR CCA 90 bp ACCTGTAGGAGAGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCCAATACCAGGACACCTaGTTTTCCCAGACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TCRRDPRPSRHSVPRLIPQYQDT*FSQTQA
Trigger: AGCTTGGGTCTGGGAAAACCAGGTGTCCTGGTATTG...GGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCTCTCCTACAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACCAATACCAGGACACCTaGTTTTCCCAGACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHQYQDT*FSQTQA
Trigger: AGCTTGGGTCTGGGAAAACCAGGTGTCCTGGTATTG...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGGGGCGAACTTGGCGGTaGGCACCGAGGTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTGRTWR*APRCCQ
Trigger: CTGACAACACCTCGGTGCCCACCGCCAAGTTCGCCC...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGCGTTCAGGGCGAACTTaGCGGTGGGCACCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTRSGRT*RWAPRC
Trigger: ACACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACG...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CCA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGAGTGACGACGAGGCGTaGAAGGATCCGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQSDDEA*KDPSLL
Trigger: CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACT...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACCGGATGGTCAGGCGGTaGCTGGAATCACATTTACAT +
Preference number: 4 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHRMVRR*LESHLH
Trigger: ATGTAAATGTGATTCCAGCCACCGCCTGACCATCCG...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR CCA 90 bp AGCAGACAACGAATGGTCAGATTCCAGGAAGACCCGCAGCAGCAGCAGCAGCAGGAAGGCAGTTGGCCTTaGGAAGGACAAGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: SRQRMVRFQEDPQQQQQQEGSWP*EGQAIR
Trigger: CCTGATGGCTTGTCCTTCCCAAGGCCAACTGCCTTC...CTGCTGCTGCTGCTGCTGCGGGTCTTCCTGGAATCTGACCATTCGTTGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp AGCTGCCTCTCTGGCAAGTCGGCAGAATTTGCTGCACCGTCAGGTGGAATGGAGGCAGCAGCAGCAGGATaGAAGATGGTCAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: SCLSGKSAEFAAPSGGMEAAAAG*KMVRLR
Trigger: CCTGAGTCTGACCATCTTCCATCCTGCTGCTGCTGC...CTCCATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGCCAGAGAGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTCACGGAGGACTTGGCTaGAGATTCTGCGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MPVFQEVSQHERGLTTFAHGGLG*RFCAQA
Trigger: AGCCTGGGCGCAGAATCTCCAGCCAAGTCCTCCGTG...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599988.5
CDS-3UTR CCA 90 bp ACTGGGCATTACTGCCCAAGTTCCTTTCAGGGAGGGTGGATCTGGGCAATCGTGGGGAAGTCAGTCTCATaGGCCCGGGCAGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TGHYCPSSFQGGWIWAIVGKSVS*ARAVAK
Trigger: CTTTGCTACTGCCCGGGCCCATGAGACTGACTTCCC...CACGATTGCCCAGATCCACCCTCCCTGAAAGGAACTTGGGCAGTAATGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp GCGCCAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTGGCCATCAGCAGTTCTaGCTTCTGCTTTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: APAPRAAQCSSSGAHRHFGHQQF*LLLYVH
Trigger: GTGAACATAAAGCAGAAGCCAGAACTGCTGATGGCC...AAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp GGGAGTCCAAGGCTACATGGCGCTATGACTGTGCCACTGCACTCCACTCCAGTCGGCAATCGTGGGTCTTaGCTGGGATCTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GSPRLHGAMTVPLHSTPVGNRGS*LGSWFW
Trigger: CCAAAACCAAGATCCCAGCCAAGACCCACGATTGCC...GACTGGAGTGGAGTGCAGTGGCACAGTCATAGCGCCATGTAGCCTTGGACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp CGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGTACAGGAGGGAGAGGTaGCTTTCTGCGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RGGKQPYVLGGETEADHRYRRER*LSAPRL
Trigger: GAGCCTGGGCGCAGAAAGCCACCTCTCCCTCCTGTA...CCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp CGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGGKQPYVLGGETEADHRDTAVR*YRRERW
Trigger: CCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTC...CCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp ACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCCAATACCAGGACACCTaGTTTTCCCAGACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TRPRTPSGGSEMPVFQEVQYQDT*FSQTQA
Trigger: AGCTTGGGTCTGGGAAAACCAGGTGTCCTGGTATTG...GACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp CTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCAATACCAGGACACCTaGTTTTCCCAGACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LLVTTRRGRIRHCWGRSHQYQDT*FSQTQA
Trigger: AGCTTGGGTCTGGGAAAACCAGGTGTCCTGGTATTG...GTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CCA 90 bp TTCAGCAAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGTGCCTTCAGCCTAGGATCCGTCACTGTTaGGGCCGAAGTCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: FSKSVSSCVVLTATCLQPRIRHC*GRSHPG
Trigger: GCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCT...AGGCTGAAGGCACGTGGCTGTGAGCACGACACAGGAAGATACAGATTTGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp CAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAATGGAGTGACGACGAGGCGTaGAAGGATCCGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: QSSRQSVLVRTGIADNEWSDDEA*KDPSLL
Trigger: CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACT...CCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTCGAGCACGGAGGACTTaGCTGGAGATTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MPVFQEVSQHERGLTTFARARRT*LEIPAP
Trigger: TGGAGCTGGAATCTCCAGCCAAGTCCTCCGTGCTCG...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CCA 90 bp TCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGCGAGCACGGAGGACTTaGCTGGAGATTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPLLTVSDDEAWKDPSLLRARRT*LEIPAP
Trigger: TGGAGCTGGAATCTCCAGCCAAGTCCTCCGTGCTCG...CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR CCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGGGAGATCCAAGGGGCTaGCAGCCCACTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTGDPRG*QPTPHP
Trigger: AGGATGAGGAGTGGGCTGCCAGCCCCTTGGATCTCC...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000599988.5
CDS-3UTR CCA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACTGGTCAGGCGGTGGCTaGAATCACATTTACATCCTT +
Preference number: 4 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHWSGGG*NHIYIL
Trigger: AAGGATGTAAATGTGATTCCAGCCACCGCCTGACCA...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR CCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACGGATGGTCAGGCGGTaGCTGGAATCACATTTACAT +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSRMVRR*LESHLH
Trigger: ATGTAAATGTGATTCCAGCCACCGCCTGACCATCCG...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR CCA 90 bp ACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCCGGATGGTCAGGCGGTaGCTGGAATCACATTTACAT +
Preference number: 4 (lower is better)
Translates to: TRPRTPSGGSEMPVFQEVRMVRR*LESHLH
Trigger: ATGTAAATGTGATTCCAGCCACCGCCTGACCATCCG...GACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR CCA 90 bp GACACCGATGACGATTCCCACCACGAGCACGGAGGACTTGGCTGGAGATTCCAGCGGATGGTCAGGCGGTaGCTGGAATCACATTTACAT +
Preference number: 4 (lower is better)
Translates to: DTDDDSHHEHGGLGWRFQRMVRR*LESHLH
Trigger: ATGTAAATGTGATTCCAGCCACCGCCTGACCATCCG...CTGGAATCTCCAGCCAAGTCCTCCGTGCTCGTGGTGGGAATCGTCATCGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR CCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTAGTCGGAATGGCGGATaGTCAGGCGGTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: MPVFQEVSQHERGLTTFASRNGG*SGGGWN
Trigger: ATTCCAGCCACCGCCTGACCATCCGCCATTCCGACT...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR CCA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGTCAGGAAGGGTAAGGTaGGAGGATCGCTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQSGRVR*EDRLSL
Trigger: CAAGCTCAAGCGATCCTCCCACCTTACCCTTCCTGA...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS-3UTR CCA 90 bp AGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAATGGTCAGATAGGCAGGCAGAGCAGTaGGAAGTCAGTCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: SRQSVLVRTGIADNEWSDRQAEQ*EVSLMG
Trigger: GCCCATGAGACTGACTTCCCACTGCTCTGCCTGCCT...ATCTGACCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp CCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGTCTTGGCTGGGATCTTaGTTTTGGTTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PAHSAGTEVAAPEGRRRRSWLGS*FWLLSR
Trigger: TCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGA...CCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp TCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGAGAATAGCAGGAAGGTaGGCTCCTTGTTGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SPLLTVSDDEAWKDPSLLRIAGR*APCWPP
Trigger: AGGCGGCCAACAAGGAGCTCACCTTCCTGCTATTCT...CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR TCA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAATTCCAGCTCCACCCTaGGGGGCTGCGCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGIPAPP*GAAPAP
Trigger: CGGGGCTGGCGCAGCCCCTCAGGGTGGAGCTGGAAT...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000426395.7
CDS-3UTR TCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTGTAGCAAGACACCGATaGCGATTCCCACCACGAGCA +
Preference number: 4 (lower is better)
Translates to: MPVFQEVSQHERGLTTFAVARHR*RFPPRA
Trigger: TGCTCGTGGTGGGAATCGTCATCGGTGTCTTGCTAC...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
ENST00000599988.5
CDS-3UTR TCA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSSMKGA*LHSLLA
Trigger: TGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCT...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR GCA 90 bp TCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGCCGCGTGCTGCACAATaGAGCAGTAGTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SPLLTVSDDEAWKDPSLLPRAAQ*SSSGAH
Trigger: ATGAGCACCACTACTGCTGCATTGTGCAGCACGCGG...CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CCA 90 bp GTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGGGCCGAAGTCACCCTaGCCGGTGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VLYYRGGKQPYVLGGETEGPKSP*PVPAAS
Trigger: GCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCC...CTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp TCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGAGTGACGACGAGGCGTaGAAGGATCCGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: SPLLTVSDDEAWKDPSLLSDDEA*KDPSLL
Trigger: CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACT...CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGCACGGAGGACTTGGCTaGAGATTCCAGCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTHGGLG*RFQLHP
Trigger: AGGGTGGAGCTGGAATCTCCAGCCAAGTCCTCCGTG...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp GCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACATGGTCAGGCGGTGGCTaGAATCACATTTACATCCTT +
Preference number: 4 (lower is better)
Translates to: AQNPFWRLRDASVPGGLTWSGGG*NHIYIL
Trigger: AAGGATGTAAATGTGATTCCAGCCACCGCCTGACCA...TGTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
3UTR CAA 72 bp CCTTTCAGGGAGGGTGGATCTGGGCAATCGTGGGTCTaGGCTGGGATCTTGGTTTTGGTTGCTCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PFREGGSGQSWV*AGILVLVAQQK
Trigger: TTTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGATCCACCCTCCCTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTGCTCATCGCCACTTTTaGCTGTTAGTGACGACGAGG +
Preference number: 4 (lower is better)
Translates to: MPVFQEVSQHERGLTTFAAHRHF*LLVTTR
Trigger: CCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGC...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR TCA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACATTCCAGCTCCACCCTaGGGGGCTGCGCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: TRVILSRWKTAICIRRGNIPAPP*GAAPAP
Trigger: CGGGGCTGGCGCAGCCCCTCAGGGTGGAGCTGGAAT...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR TCA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGAAGAACTTTCACCCCTaGACTGGATCTCAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRKNFHP*TGSQLV
Trigger: AACCAACTGAGATCCAGTTCAGGGGTGAAAGTTCTT...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426395.7
CDS-3UTR GCA 90 bp TTCAGCAAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGTGCCTTCAGCCTCCACCCCAGGTGCCCTaGTTGAGGTCGAAATTCATG +
Preference number: 4 (lower is better)
Translates to: FSKSVSSCVVLTATCLQPPPQVP*LRSKFM
Trigger: CATGAATTTCGACCTCAAGCAGGGCACCTGGGGTGG...AGGCTGAAGGCACGTGGCTGTGAGCACGACACAGGAAGATACAGATTTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAAGTCACCCTGGCCGGTaGCAGCGGCCAGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGSHPGR*QRPAHS
Trigger: GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACT...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000426395.7
CDS-3UTR CCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGAGTGACGACGAGGCGTaGAAGGATCCGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTSDDEA*KDPSLL
Trigger: CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACT...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp GAAGACCCGCAGCAGCAGCAGCAGCAGCAGCAGGATGGAAGATGGTCAGACTCAATAGCAGACAACGAATaGTCAGATTCCAGGAAGACC +
Preference number: 4 (lower is better)
Translates to: EDPQQQQQQQQDGRWSDSIADNE*SDSRKT
Trigger: GGTCTTCCTGGAATCTGACCATTCGTTGTCTGCTAT...TGAGTCTGACCATCTTCCATCCTGCTGCTGCTGCTGCTGCTGCTGCGGGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGATGCTGCTGCCACCGCTaGCTGATAGCCAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGCCCHR*LIARAS
Trigger: CGAGGCCCTGGCTATCAGTCAGCGGTGGCAGCAGCA...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR TCA 90 bp CGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 4 (lower is better)
Translates to: RGGKQPYVLGGETEADHRGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...CCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
CDS-3UTR GCA 90 bp TGTTCACTATTCTTTTCAGCAAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGGAAAAGCCAGGGCTaGTGGGTCGGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: CSLFFSANLYLPVSCSQPRKSQG*WVGPSG
Trigger: GCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTTCCG...TGGCTGTGAGCACGACACAGGAAGATACAGATTTGCTGAAAAGAATAGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp CAGCCCCGCGTGCTGCACAATGCAGCAGTAGTGGTGCTCATCGCCACTTTTGACAGAAAACACATTTGCTaGTTCAGGAAAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QPRVLHNAAVVVLIATFDRKHIC*FRKAQQ
Trigger: CTGCTGTGCTTTCCTGAAGCAGCAAATGTGTTTTCT...GTCAAAAGTGGCGATGAGCACCACTACTGCTGCATTGTGCAGCACGCGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR GCA 90 bp TTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTAGCAGAAAACACATTTaGTGCTTCAGGAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LVTTRRGRIRHCWGRSHPSRKHI*CFRKAQ
Trigger: CTGTGCTTTCCTGAAGCAGCAAATGTGTTTTCTGCT...AGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTCAATACCAGGACACCTaGTTTTCCCAGACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: MPVFQEVSQHERGLTTFAQYQDT*FSQTQA
Trigger: AGCTTGGGTCTGGGAAAACCAGGTGTCCTGGTATTG...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR TCA 90 bp TGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATATTAGCGGGACCCCCATGCTaGGAGGACGACGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CLKNDENTLIRAQTRVILAGPPC*EDDVPF
Trigger: GAAGGGAACGTCGTCCTCTCAGCATGGGGGTCCCGC...TAATATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR TCA 90 bp CCCTGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATAATTAGGAGGGGAAACTaGGGCAGACCACAGGACGGG +
Preference number: 4 (lower is better)
Translates to: PCLKNDENTLIRAQTRVIIRRGN*GRPQDG
Trigger: CCCGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAAT...TATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR GCA 90 bp TGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATATTATGCTCCCGCAGGCGGTaGGGGCAGGAGAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: CLKNDENTLIRAQTRVILCSRRR*GQENSR
Trigger: CCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCA...TAATATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR GCA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGCTCCCGCAGGCGGTaGGGGCAGGAGAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: TRVILSRWKTAICIRRGNCSRRR*GQENSR
Trigger: CCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCA...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR GCA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACCGGAAAAGCCAGGGCTaGTGGGTCGGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: TRVILSRWKTAICIRRGNRKSQG*WVGPSG
Trigger: GCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTTCCG...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR GCA 90 bp ATCTGGGCAATCGTGGGTCTTGGCTGGGATCTTGGTTTTGGTTGCTCAGCAGAACAAGTCGGCAGAATTTaGTGCACCGTCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: IWAIVGLGWDLGFGCSAEQVGRI*CTVRWN
Trigger: ATTCCACCTGACGGTGCAGCAAATTCTGCCGACTTG...TTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTTGGTCAGGCGGTGGCTaGAATCACATTTACATCCTT +
Preference number: 4 (lower is better)
Translates to: MPVFQEVSQHERGLTTFAWSGGG*NHIYIL
Trigger: AAGGATGTAAATGTGATTCCAGCCACCGCCTGACCA...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
ENST00000599988.5
CDS-3UTR TCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGGAAAGAGCTTCTCCTTaGTCCTCAGATCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTERASP*SSDLWS
Trigger: AGACCACAGATCTGAGGATCAAGGAGAAGCTCTTTC...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
CDS-3UTR GCA 90 bp TGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATATTAGGAGAGGTGGCTTTCTaGGCCCAGGCTCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CLKNDENTLIRAQTRVILGEVAF*AQAPRK
Trigger: CTTCCTGGGAGCCTGGGCGCAGAAAGCCACCTCTCC...TAATATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR GCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAACGGAAAAGCCAGGGCTaGTGGGTCGGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGERKSQG*WVGPSG
Trigger: GCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTTCCG...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR GCA 90 bp CCCGACTTATTCCCTTACCTCCCCTGCCTGAAAAATGATGAGAACACACTGATTCCGCGTGCTGCACAATaGAGCAGTAGTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PDLFPYLPCLKNDENTLIPRAAQ*SSSGAH
Trigger: ATGAGCACCACTACTGCTGCATTGTGCAGCACGCGG...AATCAGTGTGTTCTCATCATTTTTCAGGCAGGGGAGGTAAGGGAATAAGTCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGDTAVR*YRRERW
Trigger: CCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTC...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000426395.7
CDS-3UTR CCA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAAGGATCCGTCACTGTTaGGGCCGAAGTCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGRIRHC*GRSHPG
Trigger: GCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCT...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000426395.7
3UTR CAA 72 bp TCTGGGCAATCGTGGGTCTTGGCTGGGATCTTGGTTTaGGTTGCTCAGCAGAAAACACATTTGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGQSWVLAGILV*VAQQKTHLLLQ
Trigger: CTGAAGCAGCAAATGTGTTTTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR TCA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACAGACACTTGATAGGCTaGGAGTCCCGGCCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: TRVILSRWKTAICIRRGNRHLIG*ESRPRA
Trigger: AGCTCGGGGCCGGGACTCTCAGCCTATCAAGTGTCT...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426395.7
CDS-3UTR TCA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGGCTCGGTCCAGACTaGCAACAATGCCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLGLGPD*QQCPPR
Trigger: ACGAGGAGGGCATTGTTGTCAGTCTGGACCGAGCCC...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426395.7
CDS-3UTR GCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGTTCCCTTACCTCCCCTaGCTGAAAAATGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTFPYLP*LKNDEN
Trigger: GTTCTCATCATTTTTCAGGCAGGGGAGGTAAGGGAA...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTATACAGGAGGGAGAGGTaGCTTTCTGCGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLYRRER*LSAPRL
Trigger: GAGCCTGGGCGCAGAAAGCCACCTCTCCCTCCTGTA...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000426395.7
CDS-3UTR CCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAAAAAGCCAGGGCTGCTaGGTCGGGCCTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGEKSQGC*VGPSGA
Trigger: TGCGCCTGAAGGCCCGACCCAGCAGCCCTGGCTTTT...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp TGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATATTAGGAGATCCAAGGGGCTaGCAGCCCACTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: CLKNDENTLIRAQTRVILGDPRG*QPTPHP
Trigger: AGGATGAGGAGTGGGCTGCCAGCCCCTTGGATCTCC...TAATATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTACGAGCACGGAGGACTTaGCTGGAGATTCTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLRARRT*LEILRP
Trigger: TGGGCGCAGAATCTCCAGCCAAGTCCTCCGTGCTCG...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599988.5
CDS-3UTR TCA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACATTAGGAGGGGAAACTaGGGCAGACCACAGGACGGG +
Preference number: 4 (lower is better)
Translates to: TRVILSRWKTAICIRRGNIRRGN*GRPQDG
Trigger: CCCGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAAT...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
CDS-3UTR TCA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAATTAGGAGGGGAAACTaGGGCAGACCACAGGACGGG +
Preference number: 4 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLIRRGN*GRPQDG
Trigger: CCCGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAAT...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000599988.5
CDS-3UTR GCA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGACCACCCCAGGTGCCCTaGTTGAGGTCGAAATTCATG +
Preference number: 4 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGPPQVP*LRSKFM
Trigger: CATGAATTTCGACCTCAAGCAGGGCACCTGGGGTGG...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAATACAGGAGGGAGAGGTaGCTTTCTGCGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGEYRRER*LSAPRL
Trigger: GAGCCTGGGCGCAGAAAGCCACCTCTCCCTCCTGTA...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp TGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATATTACACGGAGGACTTGGCTaGAGATTCCAGCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: CLKNDENTLIRAQTRVILHGGLG*RFQLHP
Trigger: AGGGTGGAGCTGGAATCTCCAGCCAAGTCCTCCGTG...TAATATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp GTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGCACGGAGGACTTGGCTaGAGATTCCAGCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: VLYYRGGKQPYVLGGETEHGGLG*RFQLHP
Trigger: AGGGTGGAGCTGGAATCTCCAGCCAAGTCCTCCGTG...CTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTACGAGCACGGAGGACTTaGCTGGAGATTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLRARRT*LEIPAP
Trigger: TGGAGCTGGAATCTCCAGCCAAGTCCTCCGTGCTCG...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000426395.7
CDS-3UTR CCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAGGAGATCCAAGGGGCTaGCAGCCCACTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGEGDPRG*QPTPHP
Trigger: AGGATGAGGAGTGGGCTGCCAGCCCCTTGGATCTCC...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000599988.5
CDS-3UTR CCA 90 bp TGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATATTAAGTCGGAATGGCGGATaGTCAGGCGGTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: CLKNDENTLIRAQTRVILSRNGG*SGGGWN
Trigger: ATTCCAGCCACCGCCTGACCATCCGCCATTCCGACT...TAATATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CCA 90 bp GTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGAGTCGGAATGGCGGATaGTCAGGCGGTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VLYYRGGKQPYVLGGETESRNGG*SGGGWN
Trigger: ATTCCAGCCACCGCCTGACCATCCGCCATTCCGACT...CTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
CDS-3UTR TCA 90 bp CCCGACTTATTCCCTTACCTCCCCTGCCTGAAAAATGATGAGAACACACTGATTGAAAGAGCTTCTCCTTaGTCCTCAGATCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PDLFPYLPCLKNDENTLIERASP*SSDLWS
Trigger: AGACCACAGATCTGAGGATCAAGGAGAAGCTCTTTC...AATCAGTGTGTTCTCATCATTTTTCAGGCAGGGGAGGTAAGGGAATAAGTCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR TCA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACAGAATAGCAGGAAGGTaGGCTCCTTGTTGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TRVILSRWKTAICIRRGNRIAGR*APCWPP
Trigger: AGGCGGCCAACAAGGAGCTCACCTTCCTGCTATTCT...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR TCA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAAGAATAGCAGGAAGGTaGGCTCCTTGTTGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLRIAGR*APCWPP
Trigger: AGGCGGCCAACAAGGAGCTCACCTTCCTGCTATTCT...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR TCA 90 bp CCCGACTTATTCCCTTACCTCCCCTGCCTGAAAAATGATGAGAACACACTGATTAGCATGAAAGGGGCCTaGCTACATTCGCTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PDLFPYLPCLKNDENTLISMKGA*LHSLLA
Trigger: TGCTAAAAGCGAATGTAGTCAGGCCCCTTTCATGCT...AATCAGTGTGTTCTCATCATTTTTCAGGCAGGGGAGGTAAGGGAATAAGTCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR TCA 90 bp CCCGACTTATTCCCTTACCTCCCCTGCCTGAAAAATGATGAGAACACACTGATTCTTACCTCCCCTGCCTaGAAAATGATGAGAACACAC +
Preference number: 4 (lower is better)
Translates to: PDLFPYLPCLKNDENTLILTSPA*KMMRTH
Trigger: GTGTGTTCTCATCATTTTTCAGGCAGGGGAGGTAAG...AATCAGTGTGTTCTCATCATTTTTCAGGCAGGGGAGGTAAGGGAATAAGTCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR GCA 90 bp TGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATATTACCACCCCAGGTGCCCTaGTTGAGGTCGAAATTCATG +
Preference number: 4 (lower is better)
Translates to: CLKNDENTLIRAQTRVILPPQVP*LRSKFM
Trigger: CATGAATTTCGACCTCAAGCAGGGCACCTGGGGTGG...TAATATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR GCA 90 bp GTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGCCACCCCAGGTGCCCTaGTTGAGGTCGAAATTCATG +
Preference number: 4 (lower is better)
Translates to: VLYYRGGKQPYVLGGETEPPQVP*LRSKFM
Trigger: CATGAATTTCGACCTCAAGCAGGGCACCTGGGGTGG...CTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAAGTCGGAATGGCGGATaGTCAGGCGGTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGESRNGG*SGGGWN
Trigger: ATTCCAGCCACCGCCTGACCATCCGCCATTCCGACT...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
CDS-3UTR TCA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACGGAGGTCTCACAGCATaGAAGGGGCCTGACTACATT +
Preference number: 4 (lower is better)
Translates to: TRVILSRWKTAICIRRGNGGLTA*KGPDYI
Trigger: AATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCC...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
CDS-3UTR GCA 90 bp AAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGTGCCTTCAGCCTCAAGGTGATCTTGGTTTTGGTTaGTCAGCAGAAAACACATTT +
Preference number: 4 (lower is better)
Translates to: KSVSSCVVLTATCLQPQGDLGFG*SAENTF
Trigger: AAATGTGTTTTCTGCTGAGCAACCAAAACCAAGATC...ACCTTGAGGCTGAAGGCACGTGGCTGTGAGCACGACACAGGAAGATACAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAAGTGACGACGAGGCGTaGAAGGATCCGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGESDDEA*KDPSLL
Trigger: CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACT...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR TCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAGCTCATCGCCACTTTTaGCTGTTAGTGACGACGAGG +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGEAHRHF*LLVTTR
Trigger: CCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGC...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CCA 90 bp GTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGCGGATGGTCAGGCGGTaGCTGGAATCACATTTACAT +
Preference number: 4 (lower is better)
Translates to: VLYYRGGKQPYVLGGETERMVRR*LESHLH
Trigger: ATGTAAATGTGATTCCAGCCACCGCCTGACCATCCG...CTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
CDS-3UTR CCA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGGAACTGGATCTCAGTTaGTTAATTAATTACAGACAC +
Preference number: 4 (lower is better)
Translates to: GGKQPYVLGGETEADHRTELDLS*LINYRH
Trigger: GTGTCTGTAATTAATTAACCAACTGAGATCCAGTTC...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426395.7
CDS-3UTR CCA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGGTCAGGCGGTGGCTaGAATCACATTTACATCCTT +
Preference number: 4 (lower is better)
Translates to: TRVILSRWKTAICIRRGNWSGGG*NHIYIL
Trigger: AAGGATGTAAATGTGATTCCAGCCACCGCCTGACCA...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
CDS-3UTR TCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAGAAAGAGCTTCTCCTTaGTCCTCAGATCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGEERASP*SSDLWS
Trigger: AGACCACAGATCTGAGGATCAAGGAGAAGCTCTTTC...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
CDS-3UTR CCA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAATGGTCAGGCGGTGGCTaGAATCACATTTACATCCTT +
Preference number: 4 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGEWSGGG*NHIYIL
Trigger: AAGGATGTAAATGTGATTCCAGCCACCGCCTGACCA...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000599988.5
CDS GCA 90 bp CCCCATGCTGAGAGGACGACGTTCCCTTCAGCCTCGCTCCCTTCCTaGCTGCGGCCCTGGCCGGCTCCTGGCTCCCGTGACTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: PHAERTTFPSASLPS*LRPWPAPGSRDWRP
Trigger: GGGTCTCCAGTCACGGGAGCCAGGAGCCGGCCAGGGCCGCAGGCAGGAAGGGAGCGAGGCTGAAGGGAACGTCGTCCTCTCAGCATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000598927.5
CDS GCA 90 bp CAGGAGGGAGAGGTGGCTTTGTTCCCTTCAGCCTCGCTCCCTTCCTaGCTGCGGCCCTGGCCGGCTCCTGGCTCCCGTGACTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: QEGEVALFPSASLPS*LRPWPAPGSRDWRP
Trigger: GGGTCTCCAGTCACGGGAGCCAGGAGCCGGCCAGGGCCGCAGGCAGGAAGGGAGCGAGGCTGAAGGGAACAAAGCCACCTCTCCCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599701.5
CDS TCA 90 bp AAGGTGAGCTCCTTGTTGGCCGCCTTGTCCTGCTGCTGCCACCGCTaGCTGATAGCCAGGGCCTCGGGCCAGTCCCCACCCCAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: KVSSLLAALSCCCHR*LIARASGQSPPQVP
Trigger: GGGCACCTGGGGTGGGGACTGGCCCGAGGCCCTGGCTATCAGTCAGCGGTGGCAGCAGCAGGACAAGGCGGCCAACAAGGAGCTCACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
ENST00000599701.5
CDS GCA 90 bp CACTCCAGGTTTCCGCGGCCCCTCTCCAGGTGCTCCCGCAGGCGGTaGGGGCAGGAGAATAGCAGGAAGGTGAGCTCCTTGTTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: HSRFPRPLSRCSRRR*GQENSRKVSSLLAA
Trigger: GGCGGCCAACAAGGAGCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
CDS GCA 90 bp GTCCAGCAGCCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGGAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VQQPFHSRFPRPLSR*SRRRCGQENSRKVS
Trigger: GCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGGCTGCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452439.1
ENST00000594823.5
CDS GCA 90 bp GGAGAAGGCGCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGGAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GEGAFHSRFPRPLSR*SRRRCGQENSRKVS
Trigger: GCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGCGCCTTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593381.5
CDS TCA 90 bp CCAGGTGCTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGGAAGGTaGGCTCCTTGTTGGCCGCCTTGTCCTGCTGCTGCCACCGCTGAC +
Preference number: 5 (lower is better)
Translates to: PGAPAGGAGRRIAGR*APCWPPCPAAATAD
Trigger: GTCAGCGGTGGCAGCAGCAGGACAAGGCGGCCAACAAGGAGCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
CDS GCA 90 bp GACACCGTGTCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGGAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: DTVSFHSRFPRPLSR*SRRRCGQENSRKVS
Trigger: GCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGACACGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS GCA 90 bp GTGCAAGTGCCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGGAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VQVPFHSRFPRPLSR*SRRRCGQENSRKVS
Trigger: GCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGGCACTTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595677.5
ENST00000598936.1
CDS GCA 90 bp ATCCAAGGGGCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGGAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: IQGAFHSRFPRPLSR*SRRRCGQENSRKVS
Trigger: GCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGCCCCTTGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598076.1
CDS CCA 90 bp CGTAAGAACCAGCTACAGCACGAGCGGCCGCGGTCACACCGGCAATaGATCAGCAGCGGCAAGGCGGGGCTGTGCCAGTGCAGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: RKNQLQHERPRSHRQ*ISSGKAGLCQCSGE
Trigger: CTCCCCACTGCACTGGCACAGCCCCGCCTTGCCGCTGCTGATCCATTGCCGGTGTGACCGCGGCCGCTCGTGCTGTAGCTGGTTCTTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS-3UTR CAA 90 bp CACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCGCAAGGAAGGTGAGCTCCTaGTTGGCCGCCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: HCWGRSHPGRCQRPAHSARKVSS*LAALSC
Trigger: GCAGGACAAGGCGGCCAACAAGGAGCTCACCTTCCT...TGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CAA 90 bp CGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCACGAGCACGGAGGACTaGGCTGGAGATTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RHCWGRSHPGRCQRPAHSTSTED*AGDSSS
Trigger: GGAGCTGGAATCTCCAGCCAAGTCCTCCGTGCTCGT...GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598927.5
CDS GCA 90 bp GCCTTTGGTTCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGGAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AFGSFHSRFPRPLSR*SRRRCGQENSRKVS
Trigger: GCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGAACCAAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS CCA 90 bp CAGAAGGCAGGAGTCCCCGGGGCAGGCGAGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGGCTTTGTTCCCTTCAGCCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: QKAGVPGAGEDTAVR*YRRERWLCSLQPRS
Trigger: GGAGCGAGGCTGAAGGGAACAAAGCCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTCCTCGCCTGCCCCGGGGACTCCTGCCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599701.5
CDS-3UTR CAA 90 bp CGGCCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGACCGTTCAGGGCGAACTaGGCGGTGGGCACCGAGGTG +
Preference number: 5 (lower is better)
Translates to: RPAHSAGTEVAAPEGRRRPFRAN*AVGTEV
Trigger: CACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACGG...TCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CAA 90 bp GGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCGCAGGAACCGACCCCAGGTGCCCTGCTaGAGGTCGAAATTCATGAAC +
Preference number: 5 (lower is better)
Translates to: GPKSPWPVPAASPFRRNRPQVPC*RSKFMN
Trigger: GTTCATGAATTTCGACCTCAAGCAGGGCACCTGGGG...TCGGTTCCTGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CAA 90 bp CACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCGCAAGCAGGCAGTCAGTCTaGGTGAGGACGGGCATAGCA +
Preference number: 5 (lower is better)
Translates to: HCWGRSHPGRCQRPAHSASRQSV*VRTGIA
Trigger: TGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCT...TGCGGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS CCA 90 bp AGATGTGGAGCAGCCCCTCCACCCCACCCAGTCAGGACACAGAACTaGGGCGCTCCCAGTCCCTCCCAGCCTCGGAGATTCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: RCGAAPPPHPVRTQN*GAPSPSQPRRFQHQ
Trigger: TTGGTGCTGGAATCTCCGAGGCTGGGAGGGACTGGGAGCGCCCCAGTTCTGTGTCCTGACTGGGTGGGGTGGAGGGGCTGCTCCACATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS TCA 90 bp TGGTTCCCAGCCTCAGGCCCAGCAGGAGACGTTGAGAAAGTTAATTaGGCGGAGAAGGCAGCGCCAGGGGCTCGCGGGGAACTCGGGTCC +
Preference number: 5 (lower is better)
Translates to: WFPASGPAGDVEKVN*AEKAAPGARGELGS
Trigger: GGACCCGAGTTCCCCGCGAGCCCCTGGCGCTGCCTTCTCCGCTCAATTAACTTTCTCAACGTCTCCTGCTGGGCCTGAGGCTGGGAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS CCA 90 bp GGGGCAGGCGAGGACACCGCGGTAAGGTGGTACAGGAGGGAGAGGTaGCTTTCTGCAGACAGAAACAGAGCTGAAGGGAGCACACGGGCG +
Preference number: 5 (lower is better)
Translates to: GAGEDTAVRWYRRER*LSADRNRAEGSTRA
Trigger: CGCCCGTGTGCTCCCTTCAGCTCTGTTTCTGTCTGCAGAAAGCCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTCCTCGCCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS-3UTR CAA 90 bp GCCCGGGCAGTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCGTGGGCACCGAGGTGTaGTCAGGGCCCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: ARAVAKQQAVSLGEDGHSVGTEV*SGPSSQ
Trigger: CTGTGAACTGGGCCCTGACAACACCTCGGTGCCCAC...GCTATGCCCGTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTACTGCCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp CCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGCGCTGCAGGTGTGGGCACCGAGGTGTaGTCAGGGCCCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: PQEPKLQLRRVEGEGAAGVGTEV*SGPSSQ
Trigger: CTGTGAACTGGGCCCTGACAACACCTCGGTGCCCAC...ACCTGCAGCGCCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CAA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGCCGTTCAGGGCGAACTaGGCGGTGGGCACCGAGGTG +
Preference number: 5 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRPFRAN*AVGTEV
Trigger: CACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACGG...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp GGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACTCCTTGTTGGCCGCCTaGTCCTGCTGCTGCCACCGC +
Preference number: 5 (lower is better)
Translates to: GPEPLLEAQRCQCSRRSHSLLAA*SCCCHR
Trigger: GCGGTGGCAGCAGCAGGACAAGGCGGCCAACAAGGA...GTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp CCAGCCCATTCCGCAGGAACCGAAGTTGCAGCTCCGGAGGGTAGAAGGAGAAGGTCCTTGTTGGCCGCCTaGTCCTGCTGCTGCCACCGC +
Preference number: 5 (lower is better)
Translates to: PAHSAGTEVAAPEGRRRRSLLAA*SCCCHR
Trigger: GCGGTGGCAGCAGCAGGACAAGGCGGCCAACAAGGA...CCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS CCA 90 bp CAGAAGGCAGGAGTCCCCGGGGCAGGCGAGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGGCTTTCTGCAGACAGAAACAGAGCT +
Preference number: 5 (lower is better)
Translates to: QKAGVPGAGEDTAVR*YRRERWLSADRNRA
Trigger: AGCTCTGTTTCTGTCTGCAGAAAGCCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTCCTCGCCTGCCCCGGGGACTCCTGCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS-3UTR CAA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGCCGTTCAGGGCGAACTaGGCGGTGGGCACCGAGGTG +
Preference number: 5 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQPFRAN*AVGTEV
Trigger: CACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACGG...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp GGGAGTCCAAGGCTACATGGCGCTATGACTGTGCCACTGCACTCCACTCCAGTCTCCTTGTTGGCCGCCTaGTCCTGCTGCTGCCACCGC +
Preference number: 5 (lower is better)
Translates to: GSPRLHGAMTVPLHSTPVSLLAA*SCCCHR
Trigger: GCGGTGGCAGCAGCAGGACAAGGCGGCCAACAAGGA...GACTGGAGTGGAGTGCAGTGGCACAGTCATAGCGCCATGTAGCCTTGGACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp GGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGTCTTGGCTGGGATCTaGGTTTTGGTTGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: GRIRHCWGRSHPGRCQRPVLAGI*VLVAQQ
Trigger: CTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGAC...TGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS CCA 90 bp GAGGACTTGGCTGGAGATTCTGCAGCCAGAGAACGCTGTGAGATGTaGAGCAGCCCCTCCACCCCACCCAGTCAGGACACAGAACTGGGG +
Preference number: 5 (lower is better)
Translates to: EDLAGDSAARERCEM*SSPSTPPSQDTELG
Trigger: CCCCAGTTCTGTGTCCTGACTGGGTGGGGTGGAGGGGCTGCTCCACATCTCACAGCGTTCTCTGGCTGCAGAATCTCCAGCCAAGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS-3UTR CAA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAGTGGGCACCGAGGTGTaGTCAGGGCCCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSVGTEV*SGPSSQ
Trigger: CTGTGAACTGGGCCCTGACAACACCTCGGTGCCCAC...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp AGGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGTCCTTGTTGGCCGCCTaGTCCTGCTGCTGCCACCGC +
Preference number: 5 (lower is better)
Translates to: RTTRPRTPSGGSEMPVFQSLLAA*SCCCHR
Trigger: GCGGTGGCAGCAGCAGGACAAGGCGGCCAACAAGGA...CTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp AGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCTTACCTCCCCTAAGGTGAGCTCCTTGTaGGCCGCCTTGTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RSEAQPPFSPPTYSLTSPKVSSL*AALSCC
Trigger: GCAGCAGGACAAGGCGGCCAACAAGGAGCTCACCTT...AGGGGAGGTAAGGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CAA 90 bp GTAGAAGGAGAAGGCGCTGCAGGTAAGCACGGAAAAGCCAGGGCTGCTGGGTCGAAGGTGAGCTCCTTGTaGGCCGCCTTGTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VEGEGAAGKHGKARAAGSKVSSL*AALSCC
Trigger: GCAGCAGGACAAGGCGGCCAACAAGGAGCTCACCTT...CGACCCAGCAGCCCTGGCTTTTCCGTGCTTACCTGCAGCGCCTTCTCCTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS GCA 90 bp AACTCTAATCCCGCTACTGCACTCCAGTCTAGGCAACAGTGCAAGTaGCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: NSNPATALQSRQQCK*PSTPGFRGPSPGAP
Trigger: GGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGGCACTTGCACTGTTGCCTAGACTGGAGTGCAGTAGCGGGATTAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595677.5
ENST00000598936.1
CDS-3UTR CAA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAAGGTGAGCTCCTTGTaGGCCGCCTTGTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRKVSSL*AALSCC
Trigger: GCAGCAGGACAAGGCGGCCAACAAGGAGCTCACCTT...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp ACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCAAGGTGAGCTCCTTGTaGGCCGCCTTGTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TRPRTPSGGSEMPVFQEVKVSSL*AALSCC
Trigger: GCAGCAGGACAAGGCGGCCAACAAGGAGCTCACCTT...GACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGAGGAAGGTGAGCTCCTaGTTGGCCGCCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRRKVSS*LAALSC
Trigger: GCAGGACAAGGCGGCCAACAAGGAGCTCACCTTCCT...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGCCGCAGGAACCGAAGTaGCAGCTCCGGAGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRPQEPK*QLRRVE
Trigger: TTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGG...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CAA 90 bp GGACAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGCCGCAGGAACCGAAGTaGCAGCTCCGGAGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: GQLGPEPLLEAQRCQCSRPQEPK*QLRRVE
Trigger: TTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGG...CCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CAA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGACGAGCACGGAGGACTaGGCTGGAGATTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRTSTED*AGDSSS
Trigger: GGAGCTGGAATCTCCAGCCAAGTCCTCCGTGCTCGT...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CAA 90 bp CGTCACTGTTGGGGCCGAAGTCACCCTGGCCGGTGCCAGCGGCCAGCCCATTCCCAGCAGAAAACACATTaGCTGCTTCAGGAAAGCACA +
Preference number: 5 (lower is better)
Translates to: RHCWGRSHPGRCQRPAHSQQKTH*LLQEST
Trigger: TGTGCTTTCCTGAAGCAGCAAATGTGTTTTCTGCTG...GGAATGGGCTGGCCGCTGGCACCGGCCAGGGTGACTTCGGCCCCAACAGTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp ACCTGTAGGAGAGATCCGAGGCCCAGCCGCCATTCAGTCCCCCGACTTATTCCCCCCCAGGTGCCCTGCTaGAGGTCGAAATTCATGAAC +
Preference number: 5 (lower is better)
Translates to: TCRRDPRPSRHSVPRLIPPQVPC*RSKFMN
Trigger: GTTCATGAATTTCGACCTCAAGCAGGGCACCTGGGG...GGGAATAAGTCGGGGGACTGAATGGCGGCTGGGCCTCGGATCTCTCCTACAGGT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS TCA 90 bp GTGGTACAGGAGGGAGAGGTGGCTTTCTGCAGACAGAAACAGAGCTaGAGGGAGCACACGGGCGGGGAACTAGACTGCAGTGGGACAGAT +
Preference number: 5 (lower is better)
Translates to: VVQEGEVAFCRQKQS*REHTGGELDCSGTD
Trigger: ATCTGTCCCACTGCAGTCTAGTTCCCCGCCCGTGTGCTCCCTTCAGCTCTGTTTCTGTCTGCAGAAAGCCACCTCTCCCTCCTGTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS-3UTR CAA 90 bp GCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACACCCCAGGTGCCCTGCTaGAGGTCGAAATTCATGAAC +
Preference number: 5 (lower is better)
Translates to: AQNPFWRLRDASVPGGLTPQVPC*RSKFMN
Trigger: GTTCATGAATTTCGACCTCAAGCAGGGCACCTGGGG...TGTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp TTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGGGGCCGAAGTCACCCTCCCCAGGTGCCCTGCTaGAGGTCGAAATTCATGAAC +
Preference number: 5 (lower is better)
Translates to: LVTTRRGRIRHCWGRSHPPQVPC*RSKFMN
Trigger: GTTCATGAATTTCGACCTCAAGCAGGGCACCTGGGG...AGGGTGACTTCGGCCCCAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CAA 90 bp GGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGACGTCCTTGTTGGCCGCCTaGTCCTGCTGCTGCCACCGC +
Preference number: 5 (lower is better)
Translates to: GGKQPYVLGGETEADHRTSLLAA*SCCCHR
Trigger: GCGGTGGCAGCAGCAGGACAAGGCGGCCAACAAGGA...CGTCCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp TGGTGCTCATCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGAAGGTGAGCTCCTTGTaGGCCGCCTTGTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WCSSPLLTVSDDEAWKDPKVSSL*AALSCC
Trigger: GCAGCAGGACAAGGCGGCCAACAAGGAGCTCACCTT...CGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CAA 90 bp TGGTGCTCATCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGAAGGATCCGTCACTGTaGGGGCCGAAGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: WCSSPLLTVSDDEAWKDPKDPSL*GPKSPW
Trigger: CCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTT...CGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CAA 90 bp TCGCCACTTTTGACTGTTAGTGACGACGAGGCGTGGAAGGATCCGTCACTGTTGAGGAAGGTGAGCTCCTaGTTGGCCGCCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SPLLTVSDDEAWKDPSLLRKVSS*LAALSC
Trigger: GCAGGACAAGGCGGCCAACAAGGAGCTCACCTTCCT...CAACAGTGACGGATCCTTCCACGCCTCGTCGTCACTAACAGTCAAAAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598319.5
ENST00000598927.5
CDS-3UTR CAA 90 bp AGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAATGGTCAGATCCGCAGGAACCGAAGTaGCAGCTCCGGAGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: SRQSVLVRTGIADNEWSDPQEPK*QLRRVE
Trigger: TTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGG...ATCTGACCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTAAGGATCCGTCACTGTaGGGGCCGAAGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: MPVFQEVSQHERGLTTFAKDPSL*GPKSPW
Trigger: CCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTT...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CAA 90 bp GTCTTGGTGAGGACGGGCATAGCAGACAACGAATGGTCAGATTCCAGGAAGACCAAGGATCCGTCACTGTaGGGGCCGAAGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: VLVRTGIADNEWSDSRKTKDPSL*GPKSPW
Trigger: CCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTT...GGTCTTCCTGGAATCTGACCATTCGTTGTCTGCTATGCCCGTCCTCACCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp ATGCCAGTGTTCCAGGAGGTCTCACAGCATGAAAGGGGCCTGACTACATTCGCTACGAGCACGGAGGACTaGGCTGGAGATTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: MPVFQEVSQHERGLTTFATSTED*AGDSSS
Trigger: GGAGCTGGAATCTCCAGCCAAGTCCTCCGTGCTCGT...AGCGAATGTAGTCAGGCCCCTTTCATGCTGTGAGACCTCCTGGAACACTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CAA 90 bp TTGGGGGCACTGACAGGCGTGAGGTTCAAGGCAGTCAGATTCAAGGAGGTGGCAGCAAGTCGGCAGAATTaGCTGCACCGTCAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LGALTGVRFKAVRFKEVAASRQN*LHRQVE
Trigger: TTCCACCTGACGGTGCAGCAAATTCTGCCGACTTGC...TGCCACCTCCTTGAATCTGACTGCCTTGAACCTCACGCCTGTCAGTGCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp CGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGAAGGATCCGTCACTGTaGGGGCCGAAGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: RGGKQPYVLGGETEADHRKDPSL*GPKSPW
Trigger: CCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTT...CCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CAA 90 bp CAACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTGCTCATCGCCACTTTaGACTGTTAGTGACGACGAG +
Preference number: 5 (lower is better)
Translates to: QLGPEPLLEAQRCQCSRRCSSPL*TVSDDE
Trigger: CTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCA...CCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CAA 90 bp ACTAGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTGCTCATCGCCACTTTaGACTGTTAGTGACGACGAG +
Preference number: 5 (lower is better)
Translates to: TRPRTPSGGSEMPVFQEVCSSPL*TVSDDE
Trigger: CTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCA...GACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598927.5
CDS-3UTR CAA 90 bp CAGGCAGAGCAGTGGGAAGTCAGTCTCATGGGCCCGGGCAGTAGCAAAGCAGCAGCTGGGATCTTGGTTTaGGTTGCTCAGCAGAAAACA +
Preference number: 5 (lower is better)
Translates to: QAEQWEVSLMGPGSSKAAAGILV*VAQQKT
Trigger: TGTTTTCTGCTGAGCAACCAAAACCAAGATCCCAGC...TGCTGCTTTGCTACTGCCCGGGCCCATGAGACTGACTTCCCACTGCTCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp GTAGCAAAGCAGCAGGCAGTCAGTCTTGGTGAGGACGGGCATAGCAGACAACGAGGGCAATCGTGGGTCTaGGCTGGGATCTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: VAKQQAVSLGEDGHSRQRGQSWV*AGILVL
Trigger: CAAAACCAAGATCCCAGCCAAGACCCACGATTGCCC...TCGTTGTCTGCTATGCCCGTCCTCACCAAGACTGACTGCCTGCTGCTTTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp AGGCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCAAGAAAGAGCTTCTCCTaGATCCTCAGATCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: RPRTPSGGSEMPVFQEVSRKSFS*ILRSVV
Trigger: GACCACAGATCTGAGGATCAAGGAGAAGCTCTTTCT...TGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
CDS-3UTR CAA 90 bp GCCCAGAACCCCTTCTGGAGGCTCAGAGATGCCAGTGTTCCAGGAGGTCTCACAAGAAAGAGCTTCTCCTaGATCCTCAGATCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: AQNPFWRLRDASVPGGLTRKSFS*ILRSVV
Trigger: GACCACAGATCTGAGGATCAAGGAGAAGCTCTTTCT...TGTGAGACCTCCTGGAACACTGGCATCTCTGAGCCTCCAGAAGGGGTTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
ENST00000598927.5
CDS GCA 90 bp TCTGCCGCTCAGGGAATTCTTGACAAAACTGGGAAAGGAACTCGATaGCTCCGGAGTCCACAACTTGGAGGTCTCTGGATCCTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: SAAQGILDKTGKGTR*LRSPQLGGLWILLL
Trigger: TAGGAGGAGGATCCAGAGACCTCCAAGTTGTGGACTCCGGAGGCATCGAGTTCCTTTCCCAGTTTTGTCAAGAATTCCCTGAGCGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598491.5
CDS-3UTR CAA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTACCGTTCAGGGCGAACTaGGCGGTGGGCACCGAGGTG +
Preference number: 5 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLPFRAN*AVGTEV
Trigger: CACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACGG...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACCCGTTCAGGGCGAACTaGGCGGTGGGCACCGAGGTG +
Preference number: 5 (lower is better)
Translates to: TRVILSRWKTAICIRRGNPFRAN*AVGTEV
Trigger: CACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACGG...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp CCCTGCCTGAAAAATGATGAGAACACACTGATTCGGGCCCAAACTCGTGTTATACCGCAGGAACCGAAGTaGCAGCTCCGGAGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: PCLKNDENTLIRAQTRVIPQEPK*QLRRVE
Trigger: TTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGG...TATAACACGAGTTTGGGCCCGAATCAGTGTGTTCTCATCATTTTTCAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221466.10
CDS-3UTR CAA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGTGGGCACCGAGGTGTaGTCAGGGCCCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGVGTEV*SGPSSQ
Trigger: CTGTGAACTGGGCCCTGACAACACCTCGGTGCCCAC...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp CGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGGCAGACCACAGGTGCTCATCGCCACTTTaGACTGTTAGTGACGACGAG +
Preference number: 5 (lower is better)
Translates to: RGGKQPYVLGGETEADHRCSSPL*TVSDDE
Trigger: CTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCA...CCTGTGGTCTGCCTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CAA 90 bp AAATCTGTATCTTCCTGTGTCGTGCTCACAGCCACGTGCCTTCAGCCTCAAGGTAAATCTGTCTGGCCTTaGGTTCCTTCCACTCCAGGT +
Preference number: 5 (lower is better)
Translates to: KSVSSCVVLTATCLQPQGKSVWP*VPSTPG
Trigger: ACCTGGAGTGGAAGGAACCAAAGGCCAGACAGATTT...ACCTTGAGGCTGAAGGCACGTGGCTGTGAGCACGACACAGGAAGATACAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp ATCTGGGCAATCGTGGGTCTTGGCTGGGATCTTGGTTTTGGTTGCTCAGCAGAAAGAAAGAGCTTCTCCTaGATCCTCAGATCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: IWAIVGLGWDLGFGCSAERKSFS*ILRSVV
Trigger: GACCACAGATCTGAGGATCAAGGAGAAGCTCTTTCT...TTCTGCTGAGCAACCAAAACCAAGATCCCAGCCAAGACCCACGATTGCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACGTGGGCACCGAGGTGTaGTCAGGGCCCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: TRVILSRWKTAICIRRGNVGTEV*SGPSSQ
Trigger: CTGTGAACTGGGCCCTGACAACACCTCGGTGCCCAC...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAAAGGATCCGTCACTGTaGGGGCCGAAGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGKDPSL*GPKSPW
Trigger: CCAGGGTGACTTCGGCCCCAACAGTGACGGATCCTT...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000426395.7
CDS-3UTR CAA 90 bp GGCAAAGATTTCAGCAACTGCCTAGGACTGGGCATTACTGCCCAAGTTCCTTTCTGCTCATCGCCACTTTaGACTGTTAGTGACGACGAG +
Preference number: 5 (lower is better)
Translates to: GKDFSNCLGLGITAQVPFCSSPL*TVSDDE
Trigger: CTCGTCGTCACTAACAGTCAAAAGTGGCGATGAGCA...GAAAGGAACTTGGGCAGTAATGCCCAGTCCTAGGCAGTTGCTGAAATCTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp ACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACAGGAAGGTGAGCTCCTaGTTGGCCGCCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: TRVILSRWKTAICIRRGNRKVSS*LAALSC
Trigger: GCAGGACAAGGCGGCCAACAAGGAGCTCACCTTCCT...GTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp TTCGGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAAGGAAGGTGAGCTCCTaGTTGGCCGCCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: FGPKLVLYYRGGKQPYVLRKVSS*LAALSC
Trigger: GCAGGACAAGGCGGCCAACAAGGAGCTCACCTTCCT...TAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp TGTTCACTATTCTTTTCAGCAAATCTGTATCTTCCTGTGTCGTGCTCACAGCCAGGAAGGCAGTTGGCCTaGGGAAGGACAAGCCATCAG +
Preference number: 5 (lower is better)
Translates to: CSLFFSANLYLPVSCSQPGRQLA*GRTSHQ
Trigger: CTGATGGCTTGTCCTTCCCAAGGCCAACTGCCTTCC...TGGCTGTGAGCACGACACAGGAAGATACAGATTTGCTGAAAAGAATAGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598319.5
CDS-3UTR CAA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACGAGCACGGAGGACTaGGCTGGAGATTCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGETSTED*AGDSAP
Trigger: GGGCGCAGAATCTCCAGCCAAGTCCTCCGTGCTCGT...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599988.5
CDS GCA 90 bp GTTGAGTCTCAACTTCTCCTTTGTGGCACTTGGAATGAATATCTGTaGACATCCCCAGCTGGTATCTATCTTTGTCCAGCAGCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: VESQLLLCGTWNEYL*TSPAGIYLCPAALP
Trigger: TGGAAGGGCTGCTGGACAAAGATAGATACCAGCTGGGGATGTGCACAGATATTCATTCCAAGTGCCACAAAGGAGAAGTTGAGACTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452439.1
ENST00000594823.5
CDS-3UTR CAA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACGAGCACGGAGGACTaGGCTGGAGATTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGETSTED*AGDSSS
Trigger: GGAGCTGGAATCTCCAGCCAAGTCCTCCGTGCTCGT...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
CDS-3UTR CAA 90 bp AAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAACCCCAGGTGCCCTGCTaGAGGTCGAAATTCATGAAC +
Preference number: 5 (lower is better)
Translates to: KLVLYYRGGKQPYVLGGEPQVPC*RSKFMN
Trigger: GTTCATGAATTTCGACCTCAAGCAGGGCACCTGGGG...TTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp GGGCCCAAACTCGTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAAGAAAGAGCTTCTCCTaGATCCTCAGATCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: GPKLVLYYRGGKQPYVLGRKSFS*ILRSVV
Trigger: GACCACAGATCTGAGGATCAAGGAGAAGCTCTTTCT...TCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACACGAGTTTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000598076.1
CDS-3UTR CAA 90 bp GTGTTATATTATCGAGGTGGAAAACAGCCATATGTATTAGGAGGGGAAACTGAGAGAAAGAGCTTCTCCTaGATCCTCAGATCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: VLYYRGGKQPYVLGGETERKSFS*ILRSVV
Trigger: GACCACAGATCTGAGGATCAAGGAGAAGCTCTTTCT...CTCAGTTTCCCCTCCTAATACATATGGCTGTTTTCCACCTCGATAATATAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000596975.5
ENST00000598076.1
CDS TCA 72 bp GGAAGGAGAAAGAGCAGGAGCCCCAGCGCCCAGGGCTaGGGCCGCGGGACCCCCATGCTGAGAGGACGACGT +
Preference number: 6 (lower is better)
Translates to: GRRKSRSPSAQG*GRGTPMLRGRR
Trigger: ACGTCGTCCTCTCAGCATGGGGGTCCCGCGGCCTCAGCCCTGGGCGCTGGGGCTCCTGCTCTTTCTCCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221466.10
ENST00000598927.5
CDS TCA 72 bp GGAAGGAGAAAGAGCAGGAGCCCCAGCGCCCAGGGCTaGGGCCGCGGGACCCCCATGCTGAGAGGACGACCT +
Preference number: 6 (lower is better)
Translates to: GRRKSRSPSAQG*GRGTPMLRGRP
Trigger: AGGTCGTCCTCTCAGCATGGGGGTCCCGCGGCCTCAGCCCTGGGCGCTGGGGCTCCTGCTCTTTCTCCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426395.7
ENST00000595881.1
ENST00000596975.5
ENST00000599988.5
ENST00000600273.5
CDS GCA 72 bp CCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGG +
Preference number: 6 (lower is better)
Translates to: PFHSRFPRPLSR*SRRRCGQENSR
Trigger: CCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452439.1
ENST00000594823.5
ENST00000595677.5
ENST00000598936.1
CDS GCA 72 bp GCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGG +
Preference number: 6 (lower is better)
Translates to: AFHSRFPRPLSR*SRRRCGQENSR
Trigger: CCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593381.5
ENST00000598076.1
CDS CCA 72 bp GGAGTCCCCGGGGCAGGCGAGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGGCTTTCTGCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: GVPGAGEDTAVR*YRRERWLSAPR
Trigger: CCTGGGCGCAGAAAGCCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTCCTCGCCTGCCCCGGGGACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000596975.5
ENST00000598319.5
ENST00000598491.5
ENST00000598927.5
ENST00000598936.1
ENST00000600273.5
CDS CCA 72 bp CAGCTACAGCACGAGCGGCCGCGGTCACACCGGCAATaGATCAGCAGCGGCAAGGCGGGGCTGTGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: QLQHERPRSHRQ*ISSGKAGLCQC
Trigger: GCACTGGCACAGCCCCGCCTTGCCGCTGCTGATCCATTGCCGGTGTGACCGCGGCCGCTCGTGCTGTAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS CAA 90 bp GCAGAGGCGAGGCCAGGCAGGCGATCTGGGCAGACTGCCCCCAGGTaGGACGTAAGAACCAGCTACAGCACGAGCGGCCGCGGTCACACC +
Preference number: 6 (lower is better)
Translates to: AEARPGRRSGQTAPR*DVRTSYSTSGRGHT
Trigger: GGTGTGACCGCGGCCGCTCGTGCTGTAGCTGGTTCTTACGTCCAACCTGGGGGCAGTCTGCCCAGATCGCCTGCCTGGCCTCGCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS TCA 72 bp TCCTTGTTGGCCGCCTTGTCCTGCTGCTGCCACCGCTaGCTGATAGCCAGGGCCTCGGGCCAGTCCCCACCC +
Preference number: 6 (lower is better)
Translates to: SLLAALSCCCHR*LIARASGQSPP
Trigger: GGGTGGGGACTGGCCCGAGGCCCTGGCTATCAGTCAGCGGTGGCAGCAGCAGGACAAGGCGGCCAACAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
ENST00000599701.5
CDS TCA 72 bp GGAAGGAGAAAGAGCAGGAGCCCCAGCGCCCAGGGCTaGGGCCGCGGGACCCCCATGCTGAGAGGACGACTT +
Preference number: 6 (lower is better)
Translates to: GRRKSRSPSAQG*GRGTPMLRGRL
Trigger: AAGTCGTCCTCTCAGCATGGGGGTCCCGCGGCCTCAGCCCTGGGCGCTGGGGCTCCTGCTCTTTCTCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598491.5
CDS GCA 72 bp TCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCAGGTaGTCCCGCAGGCGGTGCGGGCAGGAGAATAGCAGG +
Preference number: 6 (lower is better)
Translates to: SFHSRFPRPLSR*SRRRCGQENSR
Trigger: CCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000595881.1
ENST00000598319.5
ENST00000598927.5
CDS TCA 72 bp CCCGCAGGCGGTGCGGGCAGGAGAATAGCAGGAAGGTaGGCTCCTTGTTGGCCGCCTTGTCCTGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: PAGGAGRRIAGR*APCWPPCPAAA
Trigger: GGCAGCAGCAGGACAAGGCGGCCAACAAGGAGCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
CDS GCA 72 bp TTTCCGCGGCCCCTCTCCAGGTGCTCCCGCAGGCGGTaGGGGCAGGAGAATAGCAGGAAGGTGAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: FPRPLSRCSRRR*GQENSRKVSSL
Trigger: CAAGGAGCTCACCTTCCTGCTATTCTCCTGCCCGCACCGCCTGCGGGAGCACCTGGAGAGGGGCCGCGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
CDS CAA 72 bp AGGCCAGGCAGGCGATCTGGGCAGACTGCCCCCAGGTaGGACGTAAGAACCAGCTACAGCACGAGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: RPGRRSGQTAPR*DVRTSYSTSGR
Trigger: GCGGCCGCTCGTGCTGTAGCTGGTTCTTACGTCCAACCTGGGGGCAGTCTGCCCAGATCGCCTGCCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS GCA 72 bp GGCAGAGGCGAGGCCAGGCAGGCGATCTGGGCAGACTaGCCCCAGGTTGGACGTAAGAACCAGCTACAGCAC +
Preference number: 6 (lower is better)
Translates to: GRGEARQAIWAD*PQVGRKNQLQH
Trigger: GTGCTGTAGCTGGTTCTTACGTCCAACCTGGGGGCAGTCTGCCCAGATCGCCTGCCTGGCCTCGCCTCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS CCA 72 bp GGAGTCCCCGGGGCAGGCGAGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGGCTTTCTGCAGACAGA +
Preference number: 6 (lower is better)
Translates to: GVPGAGEDTAVR*YRRERWLSADR
Trigger: TCTGTCTGCAGAAAGCCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTCCTCGCCTGCCCCGGGGACTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS CCA 72 bp GGAGTCCCCGGGGCAGGCGAGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGGCTTTGTTCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: GVPGAGEDTAVR*YRRERWLCSLQ
Trigger: CTGAAGGGAACAAAGCCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTCCTCGCCTGCCCCGGGGACTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599701.5
CDS CAA 72 bp GGTGCCAGCGGCCAGCCCATTCCGCAGGAACCGAAGTaGCAGCTCCGGAGGGTAGAAGGAGAAGGCGCCTTC +
Preference number: 6 (lower is better)
Translates to: GASGQPIPQEPK*QLRRVEGEGAF
Trigger: GAAGGCGCCTTCTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTGGCCGCTGGCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593381.5
CDS CAA 90 bp CTGATAGCCAGGGCCTCGGGCCAGTCCCCACCCCAGGTGCCCTGCTaGAGGTCGAAATTCATGAACTCCTCGCCGTTCAGGGCGAACTTG +
Preference number: 6 (lower is better)
Translates to: LIARASGQSPPQVPC*RSKFMNSSPFRANL
Trigger: CAAGTTCGCCCTGAACGGCGAGGAGTTCATGAATTTCGACCTCAAGCAGGGCACCTGGGGTGGGGACTGGCCCGAGGCCCTGGCTATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
ENST00000599701.5
ENST00000600273.5
CDS CAA 90 bp CAAGAGGCGACAGGTGGTTCCCAGCCTCAGGCCCAGCAGGAGACGTaGAGAAAGTTAATTGAGCGGAGAAGGCAGCGCCAGGGGCTCGCG +
Preference number: 6 (lower is better)
Translates to: QEATGGSQPQAQQET*RKLIERRRQRQGLA
Trigger: CGCGAGCCCCTGGCGCTGCCTTCTCCGCTCAATTAACTTTCTCAACGTCTCCTGCTGGGCCTGAGGCTGGGAACCACCTGTCGCCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS TCA 72 bp GCCTCAGGCCCAGCAGGAGACGTTGAGAAAGTTAATTaGGCGGAGAAGGCAGCGCCAGGGGCTCGCGGGGAA +
Preference number: 6 (lower is better)
Translates to: ASGPAGDVEKVN*AEKAAPGARGE
Trigger: TTCCCCGCGAGCCCCTGGCGCTGCCTTCTCCGCTCAATTAACTTTCTCAACGTCTCCTGCTGGGCCTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS GCA 72 bp CCCGCTACTGCACTCCAGTCTAGGCAACAGTGCAAGTaGCCTTCCACTCCAGGTTTCCGCGGCCCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: PATALQSRQQCK*PSTPGFRGPSP
Trigger: TGGAGAGGGGCCGCGGAAACCTGGAGTGGAAGGGCACTTGCACTGTTGCCTAGACTGGAGTGCAGTAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595677.5
ENST00000598936.1
CDS CCA 72 bp GGAGTCCCCGGGGCAGGCGAGGACACCGCGGTAAGGTaGTACAGGAGGGAGAGGTGGCTTTCTGAAGAACTT +
Preference number: 6 (lower is better)
Translates to: GVPGAGEDTAVR*YRRERWLSEEL
Trigger: AAGTTCTTCAGAAAGCCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTCCTCGCCTGCCCCGGGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594823.5
ENST00000595677.5
CDS CAA 90 bp TGCTTGAGGTCGAAATTCATGAACTCCTCGCCGTTCAGGGCGAACTaGGCGGTGGGCACCGAGGTGTTGTCAGGGCCCAGTTCACAGCCC +
Preference number: 6 (lower is better)
Translates to: CLRSKFMNSSPFRAN*AVGTEVLSGPSSQP
Trigger: GGGCTGTGAACTGGGCCCTGACAACACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACGGCGAGGAGTTCATGAATTTCGACCTCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
ENST00000599701.5
ENST00000600273.5
CDS CAA 72 bp TCGAAATTCATGAACTCCTCGCCGTTCAGGGCGAACTaGGCGGTGGGCACCGAGGTGTTGTCAGGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: SKFMNSSPFRAN*AVGTEVLSGPS
Trigger: ACTGGGCCCTGACAACACCTCGGTGCCCACCGCCAAGTTCGCCCTGAACGGCGAGGAGTTCATGAATTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000221466.10
ENST00000426395.7
ENST00000452439.1
ENST00000593381.5
ENST00000594823.5
ENST00000595677.5
ENST00000595881.1
ENST00000598076.1
ENST00000598319.5
ENST00000598927.5
ENST00000598936.1
ENST00000599701.5
ENST00000600273.5
CDS CCA 72 bp GAGGACACCGCGGTAAGGTGGTACAGGAGGGAGAGGTaGCTTTCTGCAGACAGAAACAGAGCTGAAGGGAGC +
Preference number: 6 (lower is better)
Translates to: EDTAVRWYRRER*LSADRNRAEGS
Trigger: GCTCCCTTCAGCTCTGTTTCTGTCTGCAGAAAGCCACCTCTCCCTCCTGTACCACCTTACCGCGGTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS CAA 72 bp ACAGGTGGTTCCCAGCCTCAGGCCCAGCAGGAGACGTaGAGAAAGTTAATTGAGCGGAGAAGGCAGCGCCAG +
Preference number: 6 (lower is better)
Translates to: TGGSQPQAQQET*RKLIERRRQRQ
Trigger: CTGGCGCTGCCTTCTCCGCTCAATTAACTTTCTCAACGTCTCCTGCTGGGCCTGAGGCTGGGAACCACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595881.1
CDS CAA 72 bp CTGGGAAAGGAACTCGATGCCTCCGGAGTCCACAACTaGGAGGTCTCTGGATCCTCCTCCTACCCCTCTGTA +
Preference number: 6 (lower is better)
Translates to: LGKELDASGVHN*EVSGSSSYPSV
Trigger: TACAGAGGGGTAGGAGGAGGATCCAGAGACCTCCAAGTTGTGGACTCCGGAGGCATCGAGTTCCTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598491.5
CDS CCA 72 bp TGGGAAAGGAACTCGATGCCTCCGGAGTCCACAACTTaGAGGTCTCTGGATCCTCCTCCTACCCCTCTGTAT +
Preference number: 6 (lower is better)
Translates to: WERNSMPPESTT*RSLDPPPTPLY
Trigger: ATACAGAGGGGTAGGAGGAGGATCCAGAGACCTCCAAGTTGTGGACTCCGGAGGCATCGAGTTCCTTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598491.5
CDS TCA 72 bp GACGACTTTGAGGGTGTCTGCCGCTCAGGGAATTCTTaGCAAAACTGGGAAAGGAACTCGATGCCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: DDFEGVCRSGNS*QNWERNSMPPE
Trigger: CTCCGGAGGCATCGAGTTCCTTTCCCAGTTTTGTCAAGAATTCCCTGAGCGGCAGACACCCTCAAAGTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598491.5
CDS GCA 72 bp CAGGGAATTCTTGACAAAACTGGGAAAGGAACTCGATaGCTCCGGAGTCCACAACTTGGAGGTCTCTGGATC +
Preference number: 6 (lower is better)
Translates to: QGILDKTGKGTR*LRSPQLGGLWI
Trigger: GATCCAGAGACCTCCAAGTTGTGGACTCCGGAGGCATCGAGTTCCTTTCCCAGTTTTGTCAAGAATTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598491.5