Pregenerated sensors for FCF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000119616Ensembl transcript IDs: ENST00000341162.8, ENST00000534938.6, ENST00000553615.5, ENST00000554590.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCATCTCTGTAAGAAATACAAAAATCCCAGCTACTTGAGAGGCTaGGGTGGATCATCAGGGCCTGGGAAGGTCAAGGCTGCAGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: SHLCKKYKNPSYLRG*GGSSGPGKVKAAVS Trigger: ACTCACTGCAGCCTTGACCTTCCCAGGCCCTGATGATCCACCCCAGCCTCTCAAGTAGCTGGGATTTTTGTATTTCTTACAGAGATGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATGGTTATATGGTTTGTCCAACTCATACAGATATTAACTGGTGGAATTAGTAGGCAGGGGTTGCAGTaGGCCCAGATCACGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: QMVIWFVQLIQILTGGISRQGLQ*AQITPL Trigger: CAGTGGCGTGATCTGGGCTCACTGCAACCCCTGCCT...ACTAATTCCACCAGTTAATATCTGTATGAGTTGGACAAACCATATAACCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAATGGGAGGCAGGGGTTaGAGTGAGCCCAGATCACGC | + |
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Preference number: 2 (lower is better) Translates to: FIRFVLRIKHFKEETRKAMGGRG*SEPRSR Trigger: GCGTGATCTGGGCTCACTGCAACCCCTGCCTCCCAT...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATGGTTATATGGTTTGTCCAACTCATACAGATATTAACTGGTGGAATTAGTGGCAGGAGAATCACTTaGAGGATGGGAGGCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: QMVIWFVQLIQILTGGISGRRIT*RMGGRG Trigger: ACCCCTGCCTCCCATCCTTCAAGTGATTCTCCTGCC...ACTAATTCCACCAGTTAATATCTGTATGAGTTGGACAAACCATATAACCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTGCAACCTCCACCTCCTaGGTTCAAGAGGTTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HLPFLIYWGGTYSFLRLAATSTS*VQEVLL Trigger: CAGGAGAACCTCTTGAACCCAGGAGGTGGAGGTTGC...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATACTCCTGACCTCAAGTaGTCTGCCCACCTCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QHDISTHFSKPLLHVLENTPDLK*SAHLSL Trigger: GAGACTGAGGTGGGCAGATCACTTGAGGTCAGGAGT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATATCAGTGGCTGGACGTaGTGGCACGCACCTATAGTC | + |
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Preference number: 2 (lower is better) Translates to: QHDISTHFSKPLLHVLENISGWT*WHAPIV Trigger: GACTATAGGTGCGTGCCACCACGTCCAGCCACTGAT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAGTAGAGGTGGGGTTTTaGCATGTTGTCCAGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: FIRFVLRIKHFKEETRKAVEVGF*HVVQAH Trigger: ATGAGCCTGGACAACATGGCAAAACCCCACCTCTAC...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATTCTTGTTGCCCAGGCTaGAATGAGTGCAATGGCATG | + |
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Preference number: 2 (lower is better) Translates to: QHDISTHFSKPLLHVLENSCCPG*NECNGM Trigger: CATGCCATTGCACTCATTCCAGCCTGGGCAACAAGA...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR TCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAAAATCCAATTCCCCGTaGGAAAGAGAAAGAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: FIRFVLRIKHFKEETRKAKSNSP*ERERAG Trigger: TCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTT...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGTTGCATGTAAGAAAATCCAATTCCCCGTGAGAAAGAGAAAGAGCTGGAGTAATAACTGTCTTTCTTaGTTCTGTAATATGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SVACKKIQFPVRKRKSWSNNCLS*FCNMLP Trigger: GGGAAGCATATTACAGAAGCAAGAAAGACAGTTATT...ACTCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTTTCTTACATGCAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATACCTTTATGTGCCCATaGCATGCCTCTGAAACTTTT | + |
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Preference number: 2 (lower is better) Translates to: QHDISTHFSKPLLHVLENTFMCP*HASETF Trigger: AAAAGTTTCAGAGGCATGTCATGGGCACATAAAGGT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATGGGAGGGGAGTGTCTTaGACAGAAATCTATAATTTT | + |
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Preference number: 2 (lower is better) Translates to: QHDISTHFSKPLLHVLENGRGVS*TEIYNF Trigger: AAAATTATAGATTTCTGTGCAAGACACTCCCCTCCC...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR TCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCACATATTCTTCCTGTCTaGGATTTTATACCCTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: FIRFVLRIKHFKEETRKAHILPV*DFIPFD Trigger: GTCAAAGGGTATAAAATCTCAGACAGGAAGAATATG...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR CCA 72 bp | GAAATACAAAAATCCCAGCTACTTGAGAGGCTGGGGTaGATCATCAGGGCCTGGGAAGGTCAAGGCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: EIQKSQLLERLG*IIRAWEGQGCS Trigger: ACTGCAGCCTTGACCTTCCCAGGCCCTGATGATCCACCCCAGCCTCTCAAGTAGCTGGGATTTTTGTATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAAGGCAGGAGAATCACTaGAAGGATGGGAGGCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: FIRFVLRIKHFKEETRKARQENH*KDGRQG Trigger: CCCCTGCCTCCCATCCTTCAAGTGATTCTCCTGCCT...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATTGGGGTTTCACCATGTaGGCCAGGCTGGTTTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: QHDISTHFSKPLLHVLENWGFTM*ARLVSN Trigger: GTTTGAAACCAGCCTGGCCAACATGGTGAAACCCCA...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR TCA 72 bp | AAATCATTCCACCTTTATGTGCCCATGACATGCCTCTaGAACTTTTACCCTAGCACTGCTATTTTACGGCAT | + |
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Preference number: 3 (lower is better) Translates to: KSFHLYVPMTCL*NFYPSTAILRH Trigger: ATGCCGTAAAATAGCAGTGCTAGGGTAAAAGTTTCAGAGGCATGTCATGGGCACATAAAGGTGGAATGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CAA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTTCAGGGTTCAGTCCTTaGGATGTTAATCTGACTGGG | + |
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Preference number: 3 (lower is better) Translates to: HLPFLIYWGGTYSFLRLASGFSP*DVNLTG Trigger: CCCAGTCAGATTAACATCCAAAGGACTGAACCCTGA...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CAA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCAAATCCCGCTACATTTaGTGTAATGAACTGGCAACA | + |
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Preference number: 3 (lower is better) Translates to: DVNLTGLVHLNNKYLPELKSRYI*CNELAT Trigger: TGTTGCCAGTTCATTACACAAAATGTAGCGGGATTT...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341162.8 ENST00000553615.5 |
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| 3UTR-3UTR CAA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATCTGAAGAACACTTACTaGGGCCAGGTACTATTCAAT | + |
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Preference number: 3 (lower is better) Translates to: QHDISTHFSKPLLHVLENLKNTY*GQVLFN Trigger: ATTGAATAGTACCTGGCCCAAGTAAGTGTTCTTCAG...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR CCA 72 bp | TTAAAGAGGAAACAAGGAAGGCAACAGATGGTTATATaGTTTGTCCAACTCATACAGATATTAACTGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: LKRKQGRQQMVI*FVQLIQILTGG Trigger: TCCACCAGTTAATATCTGTATGAGTTGGACAAACCATATAACCATCTGTTGCCTTCCTTGTTTCCTCTTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAAAATCCCGCTACATTTaGTGTAATGAACTGGCAACA | + |
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Preference number: 3 (lower is better) Translates to: FIRFVLRIKHFKEETRKAKSRYI*CNELAT Trigger: TGTTGCCAGTTCATTACACAAAATGTAGCGGGATTT...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATCACGCCCAGTTAATTTaGGAATTTTTAGTAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: QHDISTHFSKPLLHVLENHAQLI*EFLVEV Trigger: CACCTCTACTAAAAATTCCAAAATTAACTGGGCGTG...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR TCA 72 bp | TTAACTGGTGGAATTAGTATTCTAACACTAACAGAATaGCTCCAGACTATTTGGCCTGTTAATGAAATTTCC | + |
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Preference number: 3 (lower is better) Translates to: LTGGISILTLTE*LQTIWPVNEIS Trigger: GGAAATTTCATTAACAGGCCAAATAGTCTGGAGTCATTCTGTTAGTGTTAGAATACTAATTCCACCAGTTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTGCATGTAAGAAAATCCAATTCCCCGTGAGAAAGAGAAAGAGCTGGAGTCTTGAGAGGCTGGGGTaGATCATCAGGGCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SVACKKIQFPVRKRKSWSLERLG*IIRAWE Trigger: TTCCCAGGCCCTGATGATCCACCCCAGCCTCTCAAG...ACTCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTTTCTTACATGCAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | TCAGTTGCATGTAAGAAAATCCAATTCCCCGTGAGAAAGAGAAAGAGCTGGAGTCTCATCTCCAACTCCTaGCCTCAGGTGATCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SVACKKIQFPVRKRKSWSLISNS*PQVIHP Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTGGAGATGAG...ACTCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTTTCTTACATGCAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR GCA 90 bp | TCAGTTGCATGTAAGAAAATCCAATTCCCCGTGAGAAAGAGAAAGAGCTGGAGTGTTCAAGCGTTCTCCTaGCTCAGCCTCCAGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SVACKKIQFPVRKRKSWSVQAFS*LSLQSS Trigger: GCTACTCTGGAGGCTGAGGCAGGAGAACGCTTGAAC...ACTCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTTTCTTACATGCAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | TCAGTTGCATGTAAGAAAATCCAATTCCCCGTGAGAAAGAGAAAGAGCTGGAGTTTAGCTCAAACCACATaGCCACTGGCCTTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SVACKKIQFPVRKRKSWSLAQTT*PLAFPP Trigger: GGGAGGAAAGGCCAGTGGTCATGTGGTTTGAGCTAA...ACTCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTTTCTTACATGCAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCATCAGTGGCTGGACGTaGTGGCACGCACCTATAGTC | + |
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Preference number: 4 (lower is better) Translates to: DVNLTGLVHLNNKYLPELISGWT*WHAPIV Trigger: GACTATAGGTGCGTGCCACCACGTCCAGCCACTGAT...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR GCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAGTGATCTCGGCTCGTTaGAACCTCTGCCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: FIRFVLRIKHFKEETRKAVISAR*NLCLPG Trigger: ACCCGGGAGGCAGAGGTTGCAACGAGCCGAGATCAC...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCGAATCACTTGAAGGATaGGAGGCAGGGGTTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DVNLTGLVHLNNKYLPELESLEG*EAGVAV Trigger: CACTGCAACCCCTGCCTCCCATCCTTCAAGTGATTC...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTGCATGTAAGAAAATCCAATTCCCCGTGAGAAAGAGAAAGAGCTGGAGTAGCCTCCAGAGTAGCTaGGAATACAGGCATTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SVACKKIQFPVRKRKSWSSLQSS*EYRHLP Trigger: TGGCAAATGCCTGTATTCCCAGCTACTCTGGAGGCT...ACTCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTTTCTTACATGCAACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATAGCAGCATCAGAAAGTaGGCAGGCCAGGCACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENSSIRK*AGQAQW Trigger: CCACTGTGCCTGGCCTGCTCACTTTCTGATGCTGCT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR GCA 90 bp | CAGATGGTTATATGGTTTGTCCAACTCATACAGATATTAACTGGTGGAATTAGTTTCAAGAGGTTCTCCTaGCTCAGCCTCCCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QMVIWFVQLIQILTGGISFKRFS*LSLPSG Trigger: GCCACTGGGGAGGCTGAGGCAGGAGAACCTCTTGAA...ACTAATTCCACCAGTTAATATCTGTATGAGTTGGACAAACCATATAACCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATGCAAAACAGCATCAGTaGCTGGACGTGGTGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENAKQHQ*LDVVAR Trigger: GCGTGCCACCACGTCCAGCCACTGATGCTGTTTTGC...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATAGCCTCCCCAGTGGCTaGGATTACAGGCACGTGACA | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENSLPSG*DYRHVT Trigger: TGTCACGTGCCTGTAATCCCAGCCACTGGGGAGGCT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAACTCCTGACCTCAAGTaGTCTGCCCACCTCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FIRFVLRIKHFKEETRKATPDLK*SAHLSL Trigger: GAGACTGAGGTGGGCAGATCACTTGAGGTCAGGAGT...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTTTGCCCAGGCTGGAATaGGTGCAATGGCATGATCTC | + |
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Preference number: 4 (lower is better) Translates to: HLPFLIYWGGTYSFLRLALPRLE*VQWHDL Trigger: GAGATCATGCCATTGCACTCATTCCAGCCTGGGCAA...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATAGCTACTTGAGAGGCTaGGGTGGATCATCAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENSYLRG*GGSSGP Trigger: AGGCCCTGATGATCCACCCCAGCCTCTCAAGTAGCT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTTGCACTCCAGCCTGGTaGCAGAGCAAAACTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: HLPFLIYWGGTYSFLRLACTPAW*QSKTSS Trigger: AGATGAAGTTTTGCTCTGTCACCAGGCTGGAGTGCA...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAAGGTCAAGGCTGCAGTaGGTCATGATTGTGCCAACG | + |
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Preference number: 4 (lower is better) Translates to: FIRFVLRIKHFKEETRKARSRLQ*VMIVPT Trigger: CGTTGGCACAATCATGACTCACTGCAGCCTTGACCT...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR GCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATCCAGGCTGGAATGAGTaGAATGGCATGATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENPGWNE*NGMISA Trigger: AGCCGAGATCATGCCATTGCACTCATTCCAGCCTGG...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTTCTTGTTGCCCAGGCTaGAATGAGTGCAATGGCATG | + |
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Preference number: 4 (lower is better) Translates to: HLPFLIYWGGTYSFLRLASCCPG*NECNGM Trigger: CATGCCATTGCACTCATTCCAGCCTGGGCAACAAGA...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCTTTAGAAGGCCAAGGTaGGCAATAAGGCAAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: DVNLTGLVHLNNKYLPELFRRPR*AIRQNP Trigger: GGGATTTTGCCTTATTGCCCACCTTGGCCTTCTAAA...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCACCTTTATGTGCCCATaGCATGCCTCTGAAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: DVNLTGLVHLNNKYLPELTFMCP*HASETF Trigger: AAAAGTTTCAGAGGCATGTCATGGGCACATAAAGGT...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATATGAGTGCAATGGCATaGTCTCGGCTCATCACAACC | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENMSAMA*SRLITT Trigger: GGTTGTGATGAGCCGAGATCATGCCATTGCACTCAT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATAAAATCCCAGCTACTTaGGAGGCTGGGGTGGATCAT | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENKIPAT*EAGVDH Trigger: ATGATCCACCCCAGCCTCTCAAGTAGCTGGGATTTT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR GCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATGTAGAGGTGGGGTTTTaGCATGTTGTCCAGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENVEVGF*HVVQAH Trigger: ATGAGCCTGGACAACATGGCAAAACCCCACCTCTAC...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAGGGGTTTCACCATGTTaGCCAGGCTGGTTTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: FIRFVLRIKHFKEETRKAGVSPC*PGWFQT Trigger: AGTTTGAAACCAGCCTGGCCAACATGGTGAAACCCC...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTGCACTTCTGTCAGCATaGCATCAGTACTCATTTCTC | + |
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Preference number: 4 (lower is better) Translates to: HLPFLIYWGGTYSFLRLAALLSA*HQYSFL Trigger: GAGAAATGAGTACTGATGTCATGCTGACAGAAGTGC...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR GCA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAGGGAATACAGGCATTTaGCACCATGCCTGCCTAATT | + |
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Preference number: 4 (lower is better) Translates to: FIRFVLRIKHFKEETRKAGNTGI*HHACLI Trigger: AATTAGGCAGGCATGGTGGCAAATGCCTGTATTCCC...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CAGATGGTTATATGGTTTGTCCAACTCATACAGATATTAACTGGTGGAATTAGTAAATCCAATTCCCCGTaGGAAAGAGAAAGAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: QMVIWFVQLIQILTGGISKSNSP*ERERAG Trigger: TCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTT...ACTAATTCCACCAGTTAATATCTGTATGAGTTGGACAAACCATATAACCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR GCA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCAATAACTGTCTTTCTTaGTTCTGTAATATGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: DVNLTGLVHLNNKYLPELNNCLS*FCNMLP Trigger: GGGAAGCATATTACAGAAGCAAGAAAGACAGTTATT...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341162.8 ENST00000553615.5 |
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| CDS-3UTR GCA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTGGGAGGGGAGTGTCTTaGACAGAAATCTATAATTTT | + |
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Preference number: 4 (lower is better) Translates to: HLPFLIYWGGTYSFLRLAGRGVS*TEIYNF Trigger: AAAATTATAGATTTCTGTGCAAGACACTCCCCTCCC...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| 3UTR CAA 72 bp | TGTCAGCATGACATCAGTACTCATTTCTCTAAACCCTaGTTACATGTATTGGAAAATCTCATCAGTCACTTG | + |
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Preference number: 4 (lower is better) Translates to: CQHDISTHFSKP*LHVLENLISHL Trigger: CAAGTGACTGATGAGATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTCATATTCTTCCTGTCTaGGATTTTATACCCTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: HLPFLIYWGGTYSFLRLAHILPV*DFIPFD Trigger: GTCAAAGGGTATAAAATCTCAGACAGGAAGAATATG...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CAGATGGTTATATGGTTTGTCCAACTCATACAGATATTAACTGGTGGAATTAGTGACCGCCAAATTATGTaGGCAATCATCAGAATATCT | + |
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Preference number: 4 (lower is better) Translates to: QMVIWFVQLIQILTGGISDRQIM*AIIRIS Trigger: AGATATTCTGATGATTGCTCACATAATTTGGCGGTC...ACTAATTCCACCAGTTAATATCTGTATGAGTTGGACAAACCATATAACCATCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR TCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATATCACTAACATTTACTaGAGAACACTTACTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENITNIY*RTLTWA Trigger: GGCCCAAGTAAGTGTTCTTCAGTAAATGTTAGTGAT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATAAGGAAGGCAACAGATaGTTATATGGTTTGTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENKEGNR*LYGLSN Trigger: GTTGGACAAACCATATAACCATCTGTTGCCTTCCTT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR GCA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATATGGCCATAAATATTTaGACTTCTGTCAGCATGACA | + |
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Preference number: 4 (lower is better) Translates to: QHDISTHFSKPLLHVLENMAINI*TSVSMT Trigger: TGTCATGCTGACAGAAGTGCAAATATTTATGGCCAT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS CCA 90 bp | TCCCCTCCTTCTCCACCCAAAAAGTGGCCTGATAACGTCCCTTCTTaGACCGTCTTCTCTCACCATGGTCACGCCAAACTCCTGGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SPPSPPKKWPDNVPS*TVFSHHGHAKLLVL Trigger: AAGAACCAGGAGTTTGGCGTGACCATGGTGAGAGAAGACGGTCCAAGAAGGGACGTTATCAGGCCACTTTTTGGGTGGAGAAGGAGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534938.6 |
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| CDS-3UTR CAA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCAGGCAGGAGAATCACTaGAAGGATGGGAGGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: DVNLTGLVHLNNKYLPELRQENH*KDGRQG Trigger: CCCCTGCCTCCCATCCTTCAAGTGATTCTCCTGCCT...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCAAAAATCCCAGCTACTaGAGAGGCTGGGGTGGATCA | + |
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Preference number: 5 (lower is better) Translates to: DVNLTGLVHLNNKYLPELKNPSY*RGWGGS Trigger: TGATCCACCCCAGCCTCTCAAGTAGCTGGGATTTTT...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCTCAGGGTTCAGTCCTTaGGATGTTAATCTGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: DVNLTGLVHLNNKYLPELSGFSP*DVNLTG Trigger: CCCAGTCAGATTAACATCCAAAGGACTGAACCCTGA...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341162.8 ENST00000553615.5 |
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| CDS-3UTR CAA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATTGGGGTTTTGCCATGTaGTCCAGGCTCATCTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: QHDISTHFSKPLLHVLENWGFAM*SRLISN Trigger: GTTGGAGATGAGCCTGGACAACATGGCAAAACCCCA...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | TCAGTTGCATGTAAGAAAATCCAATTCCCCGTGAGAAAGAGAAAGAGCTGGAGTCTGAAGAACACTTACTaGGGCCAGGTACTATTCAAT | + |
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Preference number: 5 (lower is better) Translates to: SVACKKIQFPVRKRKSWSLKNTY*GQVLFN Trigger: ATTGAATAGTACCTGGCCCAAGTAAGTGTTCTTCAG...ACTCCAGCTCTTTCTCTTTCTCACGGGGAATTGGATTTTCTTACATGCAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATTCAGGGTTCAGTCCTTaGGATGTTAATCTGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: QHDISTHFSKPLLHVLENSGFSP*DVNLTG Trigger: CCCAGTCAGATTAACATCCAAAGGACTGAACCCTGA...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | GATGTTAATCTGACTGGGCTGGTGCACCTAAATAATAAATATCTCCCTGAACTCCACGCCCAGTTAATTTaGGAATTTTTAGTAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: DVNLTGLVHLNNKYLPELHAQLI*EFLVEV Trigger: CACCTCTACTAAAAATTCCAAAATTAACTGGGCGTG...GAGTTCAGGGAGATATTTATTATTTAGGTGCACCAGCCCAGTCAGATTAACATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | CATCTTCCATTCCTAATTTACTGGGGAGGCACCTATTCATTTTTAAGATTAGCTCCCTTGTTACATGTATaGGAAAATCTCATCAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: HLPFLIYWGGTYSFLRLAPLLHV*ENLISH Trigger: GTGACTGATGAGATTTTCCAATACATGTAACAAGGG...AGCTAATCTTAAAAATGAATAGGTGCCTCCCCAGTAAATTAGGAATGGAAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | CAGATGGTTATATGGTTTGTCCAACTCATACAGATATTAACTGGTGGAATTAGTAAATCCCGCTACATTTaGTGTAATGAACTGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: QMVIWFVQLIQILTGGISKSRYI*CNELAT Trigger: TGTTGCCAGTTCATTACACAAAATGTAGCGGGATTT...ACTAATTCCACCAGTTAATATCTGTATGAGTTGGACAAACCATATAACCATCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | CAGCATGACATCAGTACTCATTTCTCTAAACCCTTGTTACATGTATTGGAAAATAAATGGATAGCCACCTaGCCATTGTGTAATAATCAC | + |
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Preference number: 5 (lower is better) Translates to: QHDISTHFSKPLLHVLENKWIAT*PLCNNH Trigger: GTGATTATTACACAATGGCAAGGTGGCTATCCATTT...ATTTTCCAATACATGTAACAAGGGTTTAGAGAAATGAGTACTGATGTCATGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS-3UTR CAA 90 bp | TTTATCAGGTTTGTTTTGCGGATTAAACACTTTAAAGAGGAAACAAGGAAGGCAAATGGCCATAAATATTaGCACTTCTGTCAGCATGAC | + |
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Preference number: 5 (lower is better) Translates to: FIRFVLRIKHFKEETRKANGHKY*HFCQHD Trigger: GTCATGCTGACAGAAGTGCAAATATTTATGGCCATT...TGCCTTCCTTGTTTCCTCTTTAAAGTGTTTAATCCGCAAAACAAACCTGATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341162.8 |
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| CDS CCA 72 bp | TCTCCACCCAAAAAGTGGCCTGATAACGTCCCTTCTTaGACCGTCTTCTCTCACCATGGTCACGCCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: SPPKKWPDNVPS*TVFSHHGHAKL Trigger: GAGTTTGGCGTGACCATGGTGAGAGAAGACGGTCCAAGAAGGGACGTTATCAGGCCACTTTTTGGGTGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534938.6 |
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| CDS CCA 72 bp | CTACTTATCCTCTCTAGACTCTTATTAGAATATCCCTaGGCAGTTGATTCCAGACACTCACAGCCTCTGATC | + |
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Preference number: 6 (lower is better) Translates to: LLILSRLLLEYP*AVDSRHSQPLI Trigger: GATCAGAGGCTGTGAGTGTCTGGAATCAACTGCCCAGGGATATTCTAATAAGAGTCTAGAGAGGATAAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554590.5 |
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