RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXW9 (Homo sapiens)

Ensembl gene IDs: ENSG00000132004

Ensembl transcript IDs: ENST00000393261.8, ENST00000587296.1, ENST00000587955.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCCCAGGCCAGGACGCTCACCCGAATGTGGCTGGGACTCCTTGTaGCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGG +
Preference number: 1 (lower is better)
Translates to: GPRPGRSPECGWDSL*PRPTGRRQHQHWGW
Trigger: CCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTCCTGGCCTGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR GCA 90 bp GCATCCCGGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTaGCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGG +
Preference number: 1 (lower is better)
Translates to: ASRPPPTPECGWDSL*PRPTGRRQHQHWGW
Trigger: CCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCCGGGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 90 bp CGCTGCAGGACGCTGTTGGCTCGGCGGTCCACCACCACCAGGGTGTaGTCCTCGCTGCCTGAGATGATGTGCCGGTCATCCGCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: RCRTLLARRSTTTRV*SSLPEMMCRSSASR
Trigger: CCTGCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGGACCGCCGAGCCAACAGCGTCCTGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR TCA 90 bp CTCGGCGGTCCACCACCACCAGGGTGTGGTCCTCGCTGCCTGAGATaGTGTGCCGGTCATCCGCCAGCAGGGTCAGCACGGGTCTGGAGT +
Preference number: 1 (lower is better)
Translates to: LGGPPPPGCGPRCLR*CAGHPPAGSARVWS
Trigger: ACTCCAGACCCGTGCTGACCCTGCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGGACCGCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR TCA 90 bp GTTGGCTCGGCGGTCCACCACCACCAGGGTGTGGTCCTCGCTGCCTaGGATGATGTGCCGGTCATCCGCCAGCAGGGTCAGCACGGGTCT +
Preference number: 1 (lower is better)
Translates to: VGSAVHHHQGVVLAA*DDVPVIRQQGQHGS
Trigger: AGACCCGTGCTGACCCTGCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGGACCGCCGAGCCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 90 bp CGGTCCACCACCACCAGGGTGTGGTCCTCGCTGCCTGAGATGATGTaGCGGTCATCCGCCAGCAGGGTCAGCACGGGTCTGGAGTGTAGT +
Preference number: 1 (lower is better)
Translates to: RSTTTRVWSSLPEMM*RSSASRVSTGLECS
Trigger: ACTACACTCCAGACCCGTGCTGACCCTGCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 90 bp GGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGTGCATaGCTGGGTCTGGTCTGGCTGAACCAGTTGGTCTGCAGGTGTCCA +
Preference number: 1 (lower is better)
Translates to: GGGKRWEHMGQGTGA*LGLVWLNQLVCRCP
Trigger: TGGACACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCATGCACCTGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 90 bp TGCAGGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGTaGATGCCTGGGTCTGGTCTGGCTGAACCAGTTGGTCTGCAGGTG +
Preference number: 1 (lower is better)
Translates to: CRRREEVGTHGPGDR*MPGSGLAEPVGLQV
Trigger: CACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCATGCACCTGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR TCA 90 bp GATGGCCGCCGATCTGCTGAAGTTCTGCACGGAGCAGGCCAAGAATaGCCCCTTCCTTGTGGGCATCCCGGCCGCCACCAACTCCCGAAT +
Preference number: 1 (lower is better)
Translates to: DGRRSAEVLHGAGQE*PLPCGHPGRHQLPN
Trigger: ATTCGGGAGTTGGTGGCGGCCGGGATGCCCACAAGGAAGGGGTCATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 90 bp GGGACAGGTGCATGCCTGGGTCTGGTCTGGCTGAACCAGTTGGTCTaGAGGTGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTGCACG +
Preference number: 1 (lower is better)
Translates to: GTGACLGLVWLNQLV*RCPKMAADLLKFCT
Trigger: CGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCATGCACCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 90 bp TTGGTCTGCAGGTGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTaGACGGAGCAGGCCAAGAATGACCCCTTCCTTGTGGGCATCCCG +
Preference number: 1 (lower is better)
Translates to: LVCRCPKMAADLLKF*TEQAKNDPFLVGIP
Trigger: CGGGATGCCCACAAGGAAGGGGTCATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACACCTGCAGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 90 bp GACCCTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTCCTTaGTGGGTCTGTGGGCACGTGCACCCGGATGGTCTTGTCAGTGGA +
Preference number: 1 (lower is better)
Translates to: DPIEPIVMPSGANGP*WVCGHVHPDGLVSG
Trigger: TCCACTGACAAGACCATCCGGGTGCACGTGCCCACAGACCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR GCA 90 bp GTCGGGGCCAGTGCAGGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGCTGGGACTCCTTGTaGCCTAGGCCCACGGGGCGG +
Preference number: 2 (lower is better)
Translates to: VGASAGGGKRWEHMGQGTGWDSL*PRPTGR
Trigger: CCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC...TGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCCTGCACTGGCCCCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 90 bp ATAGGGCCCAGGCCAGGACGCTCACCCGAATGTGGCTGGGACTCCTaGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGA +
Preference number: 2 (lower is better)
Translates to: IGPRPGRSPECGWDS*CPRPTGRRQHQHWG
Trigger: TCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTCCTGGCCTGGGCCCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR-3UTR CCA 90 bp CGGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGTGCTTCAACAGGGCTaGGCCGGCTCTGGGGTCGTA +
Preference number: 2 (lower is better)
Translates to: RPPPTPECGWDSLCPRPTVLQQG*AGSGVV
Trigger: TACGACCCCAGAGCCGGCCCAGCCCTGTTGAAGCAC...CGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp GTCGGGGCCAGTGCAGGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAACGTGCAGCAGGCCCTaGTTGTCACCAGCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: VGASAGGGKRWEHMGQGTTCSRP*LSPAQS
Trigger: GCTCTGGGCTGGTGACAACCAGGGCCTGCTGCACGT...TGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCCTGCACTGGCCCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp GTCGGGGCCAGTGCAGGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACATCCTTGGTGGGTCTGTaGGCACGTGCACCCGGATGG +
Preference number: 2 (lower is better)
Translates to: VGASAGGGKRWEHMGQGTSLVGL*ARAPGW
Trigger: CCATCCGGGTGCACGTGCCCACAGACCCACCAAGGA...TGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCCTGCACTGGCCCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR GCA 90 bp GTCGGGGCCAGTGCAGGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACACTGCCTGAGATGATGTaGCGGTCATCCGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: VGASAGGGKRWEHMGQGTLPEMM*RSSASR
Trigger: CCTGCTGGCGGATGACCGGCACATCATCTCAGGCAG...TGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCCTGCACTGGCCCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp CCCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGTGGGAAGCGGCCCCCTaGGTGGGCCTGAACCCCAAT +
Preference number: 2 (lower is better)
Translates to: PQEQRRKPSLRQAVSTSTWEAAP*VGLNPN
Trigger: ATTGGGGTTCAGGCCCACCCAGGGGGCCGCTTCCCA...CGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR-3UTR CCA 90 bp CGGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGCACGTGCACCCGGATaGTCTTGTCAGTGGATGTGG +
Preference number: 2 (lower is better)
Translates to: RPPPTPECGWDSLCPRPTARAPG*SCQWMW
Trigger: CCACATCCACTGACAAGACCATCCGGGTGCACGTGC...CGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR TCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCCCCCTGGGTGGGCCTaGACCCCAATTTCACCCTTC +
Preference number: 2 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSPPGWA*TPISPF
Trigger: GAAGGGTGAAATTGGGGTTCAGGCCCACCCAGGGGG...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR-3UTR GCA 90 bp CATCCAAATCATAACAAAACCAGGGCCCAAGAGTGGGAAGCGGCCCCCTGGGTGGGCTGGGACTCCTTGTaGCCTAGGCCCACGGGGCGG +
Preference number: 2 (lower is better)
Translates to: HPNHNKTRAQEWEAAPWVGWDSL*PRPTGR
Trigger: CCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC...CACCCAGGGGGCCGCTTCCCACTCTTGGGCCCTGGTTTTGTTATGATTTGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR-3UTR CCA 90 bp GGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGTGCATGCCTGGGTGCCTTCGGGTGCAAATaGTCCTTGGTGGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: GGGKRWEHMGQGTGACLGAFGCK*SLVGLW
Trigger: CCACAGACCCACCAAGGACCATTTGCACCCGAAGGC...ACCCAGGCATGCACCTGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 90 bp TGGCCCACATCAAAGGACCGGATAAGCTGGAAGCAGCCGTTGCGGTaGGCGAAGACGTGCAGCAGGCCCTGGTTGTCACCAGCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: WPTSKDRISWKQPLR*AKTCSRPWLSPAQS
Trigger: GCTCTGGGCTGGTGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGCTTATCCGGTCCTTTGATGTGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR TCA 90 bp CCCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGGTGGTCCTCGCTGCCTaGGATGATGTGCCGGTCATC +
Preference number: 2 (lower is better)
Translates to: PQEQRRKPSLRQAVSTSTVVLAA*DDVPVI
Trigger: GATGACCGGCACATCATCTCAGGCAGCGAGGACCAC...CGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR GCA 90 bp CGGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGTCTGGAGTGTAGTTaGTGGTGCTTCAACAGGGCT +
Preference number: 2 (lower is better)
Translates to: RPPPTPECGWDSLCPRPTGLECS*WCFNRA
Trigger: AGCCCTGTTGAAGCACCAGCAACTACACTCCAGACC...CGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp GTCGGGGCCAGTGCAGGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACACACCAACATTGGGGATaGTCCCCCAAGAACAGAGGA +
Preference number: 2 (lower is better)
Translates to: VGASAGGGKRWEHMGQGTHQHWG*SPKNRG
Trigger: TCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTG...TGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCCTGCACTGGCCCCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 90 bp AAGCTGTGGCCCACATCAAAGGACCGGATAAGCTGGAAGCAGCCGTaGCGGTTGGCGAAGACGTGCAGCAGGCCCTGGTTGTCACCAGCC +
Preference number: 2 (lower is better)
Translates to: KLWPTSKDRISWKQP*RLAKTCSRPWLSPA
Trigger: GGCTGGTGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGCTTATCCGGTCCTTTGATGTGGGCCACAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR GCA 90 bp GGGCCAGTGCAGGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGTGGATCTGCTGAAGTTCTaGACGGAGCAGGCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: GPVQEAGRGGNTWARGQVDLLKF*TEQAKN
Trigger: ATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATC...CACCTGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCCTGCACTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCTCACCCGAATGTGGCTaGGACTCCTTGTGCCCTAGG +
Preference number: 2 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSSPECG*DSLCPR
Trigger: CCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGA...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR-3UTR CCA 90 bp CACCCGGATGGTCTTGTCAGTGGATGTGGTGTACAAGGCTCCCACGGAGTACTGGGGCTGGGCCGGCTCTaGGGTCGTAGATGGTCACCT +
Preference number: 2 (lower is better)
Translates to: HPDGLVSGCGVQGSHGVLGLGRL*GRRWSP
Trigger: AGGTGACCATCTACGACCCCAGAGCCGGCCCAGCCC...CAGTACTCCGTGGGAGCCTTGTACACCACATCCACTGACAAGACCATCCGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCAGGCAGCACCAACATTaGGGATGGTCCCCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSRQHQH*GWSPKN
Trigger: GTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCT...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
3UTR-3UTR CCA 90 bp GAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGCTCAGGCTCTGGGGTCGTAGATaGTCACCTTCTTGTCATAGG +
Preference number: 2 (lower is better)
Translates to: EEAQPPAGSIHIHAHLLRLWGRR*SPSCHR
Trigger: CCTATGACAAGAAGGTGACCATCTACGACCCCAGAG...CCTGAGCAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCAAGGACCGGATAAGCTaGAAGCAGCCGTTGCGGTTG +
Preference number: 2 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSKDRIS*KQPLRL
Trigger: CAACCGCAACGGCTGCTTCCAGCTTATCCGGTCCTT...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp CCGGCCACCACCAGGTTGCCCTCAGCACAGACCCTATTGAGCCCATTGTCATGCGGTGCAAATGGTCCTTaGTGGGTCTGTGGGCACGTG +
Preference number: 2 (lower is better)
Translates to: PATTRLPSAQTLLSPLSCGANGP*WVCGHV
Trigger: CACGTGCCCACAGACCCACCAAGGACCATTTGCACC...GCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR GCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCTGTCATGCCTTCGGGTaGAAATGGTCCTTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSCHAFG*KWSLVG
Trigger: ACCCACCAAGGACCATTTGCACCCGAAGGCATGACA...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR GCA 90 bp CCTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTCCTTGGTGGGTCTGTTCCAGCTGCAGACGCTaGAGGACGCTGTTGGCTCGG +
Preference number: 2 (lower is better)
Translates to: PIEPIVMPSGANGPWWVCSSCRR*RTLLAR
Trigger: CCGAGCCAACAGCGTCCTGCAGCGTCTGCAGCTGGA...ACAGACCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR GCA 90 bp GCCCTCAGCACAGACCCTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTGCTGGAAGCAGCCGTTaGGGTTGGCGAAGACGTGCA +
Preference number: 2 (lower is better)
Translates to: ALSTDPIEPIVMPSGANGAGSSR*GWRRRA
Trigger: TGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGC...ACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp TGCAGGTGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTGCACGGAGCAGGCCTCTTGTCAGTGGATGTaGTGTACAAGGCTCCCACGG +
Preference number: 2 (lower is better)
Translates to: CRCPKMAADLLKFCTEQASCQWM*CTRLPR
Trigger: CCGTGGGAGCCTTGTACACCACATCCACTGACAAGA...GGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCGGATGGTCTTGTCAGTaGATGTGGTGTACAAGGCTC +
Preference number: 2 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSGWSCQ*MWCTRL
Trigger: GAGCCTTGTACACCACATCCACTGACAAGACCATCC...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp TGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTGCACGGAGCAGGCCAAGAATCTGGAGTGTAGTTGCTaGTGCTTCAACAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CPKMAADLLKFCTEQAKNLECSC*CFNRAG
Trigger: CCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAG...ATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR GCA 90 bp CTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTCCTTGGTGGGTCTGTGGTTCCTGGTAGGACATaGAGAGCAGGTAGGAGTCCA +
Preference number: 2 (lower is better)
Translates to: LLSPLSCLRVQMVLGGSVVPGRT*RAGRSP
Trigger: TGGACTCCTACCTGCTCTGCATGTCCTACCAGGAAC...CACAGACCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CCA 90 bp AACATGTCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATACGCTCACCCGAATGTaGCTGGGACTCCTTGTGCCC +
Preference number: 2 (lower is better)
Translates to: NMSGLFLLRSQLRAGHPNTLTRM*LGLLVP
Trigger: GGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGT...ATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGACATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR-3UTR CCA 90 bp TCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACCACCAACATTGGGGATaGTCCCCCAAGAACAGAGGA +
Preference number: 2 (lower is better)
Translates to: SGLFLLRSQLRAGHPNHNHQHWG*SPKNRG
Trigger: TCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTG...GTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR TCA 72 bp CCACCACCACCAGGGTGTGGTCCTCGCTGCCTGAGATaGTGTGCCGGTCATCCGCCAGCAGGGTCAGCACGG +
Preference number: 3 (lower is better)
Translates to: PPPPGCGPRCLR*CAGHPPAGSAR
Trigger: CCGTGCTGACCCTGCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR TCA 72 bp GCGGTCCACCACCACCAGGGTGTGGTCCTCGCTGCCTaGGATGATGTGCCGGTCATCCGCCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: AVHHHQGVVLAA*DDVPVIRQQGQ
Trigger: CTGACCCTGCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGGACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 72 bp CCAGGACGCTCACCCGAATGTGGCTGGGACTCCTTGTaGCCTAGGCCCACGGGGCGGAGGCAGCACCAACAT +
Preference number: 3 (lower is better)
Translates to: PGRSPECGWDSL*PRPTGRRQHQH
Trigger: ATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
3UTR GCA 72 bp TCCGCCAGCAGGGTCAGCACGGGTCTGGAGTGTAGTTaGTGGTGCTTCAACAGGGCTGGGCCGGCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SASRVSTGLECS*WCFNRAGPALG
Trigger: CCCCAGAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGACCCGTGCTGACCCTGCTGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 72 bp CCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTaGCCTAGGCCCACGGGGCGGAGGCAGCACCAACAT +
Preference number: 3 (lower is better)
Translates to: PPPTPECGWDSL*PRPTGRRQHQH
Trigger: ATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 72 bp ACCACCAGGGTGTGGTCCTCGCTGCCTGAGATGATGTaGCGGTCATCCGCCAGCAGGGTCAGCACGGGTCTG +
Preference number: 3 (lower is better)
Translates to: TTRVWSSLPEMM*RSSASRVSTGL
Trigger: CAGACCCGTGCTGACCCTGCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 72 bp TGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTaGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCCA +
Preference number: 3 (lower is better)
Translates to: CPRPTGRRQHQH*GWSPKNRGGSP
Trigger: TGGGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
3UTR CCA 72 bp ACGCTGTTGGCTCGGCGGTCCACCACCACCAGGGTGTaGTCCTCGCTGCCTGAGATGATGTGCCGGTCATCC +
Preference number: 3 (lower is better)
Translates to: TLLARRSTTTRV*SSLPEMMCRSS
Trigger: GGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGGACCGCCGAGCCAACAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 72 bp TGTGCCGGTCATCCGCCAGCAGGGTCAGCACGGGTCTaGAGTGTAGTTGCTGGTGCTTCAACAGGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: CAGHPPAGSARV*SVVAGASTGLG
Trigger: GCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGACCCGTGCTGACCCTGCTGGCGGATGACCGGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 72 bp TCTGCACGGAGCAGGCCAAGAATGACCCCTTCCTTGTaGGCATCCCGGCCGCCACCAACTCCCGAATGTGGC +
Preference number: 3 (lower is better)
Translates to: SARSRPRMTPSL*ASRPPPTPECG
Trigger: GCCACATTCGGGAGTTGGTGGCGGCCGGGATGCCCACAAGGAAGGGGTCATTCTTGGCCTGCTCCGTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CAA 90 bp TCTGTGGGCACGTGCACCCGGATGGTCTTGTCAGTGGATGTGGTGTACAAGGCTTGTGGCTGGGACTCCTaGTGCCCTAGGCCCACGGGG +
Preference number: 3 (lower is better)
Translates to: SVGTCTRMVLSVDVVYKACGWDS*CPRPTG
Trigger: CCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACA...AGCCTTGTACACCACATCCACTGACAAGACCATCCGGGTGCACGTGCCCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CAA 90 bp CGGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGACCCTATTGAGCCCATaGTCATGCCTTCGGGTGCAA +
Preference number: 3 (lower is better)
Translates to: RPPPTPECGWDSLCPRPTTLLSP*SCLRVQ
Trigger: TTGCACCCGAAGGCATGACAATGGGCTCAATAGGGT...CGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CAA 90 bp AGCTGGAAGCAGCCGTTGCGGTTGGCGAAGACGTGCAGCAGGCCCTGGTTGTCAGAGGCAGCACCAACATaGGGGATGGTCCCCCAAGAA +
Preference number: 3 (lower is better)
Translates to: SWKQPLRLAKTCSRPWLSEAAPT*GMVPQE
Trigger: TTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTC...TGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CAA 90 bp GCATGCCTGGGTCTGGTCTGGCTGAACCAGTTGGTCTGCAGGTGTCCAAAGATGTGCAGCAGGCCCTGGTaGTCACCAGCCCAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: ACLGLVWLNQLVCRCPKMCSRPW*SPAQSW
Trigger: CCAGCTCTGGGCTGGTGACAACCAGGGCCTGCTGCA...CATCTTTGGACACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR TCA 72 bp CGATCTGCTGAAGTTCTGCACGGAGCAGGCCAAGAATaGCCCCTTCCTTGTGGGCATCCCGGCCGCCACCAA +
Preference number: 3 (lower is better)
Translates to: RSAEVLHGAGQE*PLPCGHPGRHQ
Trigger: TTGGTGGCGGCCGGGATGCCCACAAGGAAGGGGTCATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 72 bp AAGGTGGCCATCAACAGTGACATTGGGCAGGCCCTCTaGGCAGTGGAGCAGCTCCAGATGGAGGCAGGCATC +
Preference number: 3 (lower is better)
Translates to: KVAINSDIGQAL*AVEQLQMEAGI
Trigger: GATGCCTGCCTCCATCTGGAGCTGCTCCACTGCCCAGAGGGCCTGCCCAATGTCACTGTTGATGGCCACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CAA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCTGCACCCGGATGGTCTaGTCAGTGGATGTGGTGTAC +
Preference number: 3 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSCTRMV*SVDVVY
Trigger: GTACACCACATCCACTGACAAGACCATCCGGGTGCA...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 72 bp GCATGCCTGGGTCTGGTCTGGCTGAACCAGTTGGTCTaGAGGTGTCCAAAGATGGCCGCCGATCTGCTGAAG +
Preference number: 3 (lower is better)
Translates to: ACLGLVWLNQLV*RCPKMAADLLK
Trigger: CTTCAGCAGATCGGCGGCCATCTTTGGACACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 72 bp GCTTCAACAGGGCTGGGCCGGCTCTGGGGTCGTAGATaGTCACCTTCTTGTCATAGGTGCCAGTCACCAGGA +
Preference number: 3 (lower is better)
Translates to: ASTGLGRLWGRR*SPSCHRCQSPG
Trigger: TCCTGGTGACTGGCACCTATGACAAGAAGGTGACCATCTACGACCCCAGAGCCGGCCCAGCCCTGTTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 72 bp GGTCTGTGGGCACGTGCACCCGGATGGTCTTGTCAGTaGATGTGGTGTACAAGGCTCCCACGGAGTACTGGA +
Preference number: 3 (lower is better)
Translates to: GLWARAPGWSCQ*MWCTRLPRSTG
Trigger: TCCAGTACTCCGTGGGAGCCTTGTACACCACATCCACTGACAAGACCATCCGGGTGCACGTGCCCACAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CCA 72 bp GAGCCCATTGTCATGCCTTCGGGTGCAAATGGTCCTTaGTGGGTCTGTGGGCACGTGCACCCGGATGGTCTT +
Preference number: 3 (lower is better)
Translates to: EPIVMPSGANGP*WVCGHVHPDGL
Trigger: AAGACCATCCGGGTGCACGTGCCCACAGACCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR-3UTR CAA 90 bp GCCCTCAGCACAGACCCTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTAAGCAGCCGTTGCGGTaGGCGAAGACGTGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: ALSTDPIEPIVMPSGANGKQPLR*AKTCSR
Trigger: CCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTT...ACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR TCA 72 bp TGGTCTGCAGGTGTCCAAAGATGGCCGCCGATCTGCTaGAGTTCTGCACGGAGCAGGCCAAGAATGACCCCT +
Preference number: 3 (lower is better)
Translates to: WSAGVQRWPPIC*SSARSRPRMTP
Trigger: AGGGGTCATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACACCTGCAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR TCA 72 bp TGGTGTACAAGGCTCCCACGGAGTACTGGATCCCAGTaGTGGGAAAGCTGTGGCCCACATCAAAGGACCGGA +
Preference number: 3 (lower is better)
Translates to: WCTRLPRSTGSQ*WESCGPHQRTG
Trigger: TCCGGTCCTTTGATGTGGGCCACAGCTTTCCCATCACTGGGATCCAGTACTCCGTGGGAGCCTTGTACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 72 bp AGGTGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTaGACGGAGCAGGCCAAGAATGACCCCTTCCTTGTG +
Preference number: 3 (lower is better)
Translates to: RCPKMAADLLKF*TEQAKNDPFLV
Trigger: CACAAGGAAGGGGTCATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR GCA 72 bp TTGCCCTCAGCACAGACCCTATTGAGCCCATTGTCATaGCTTCGGGTGCAAATGGTCCTTGGTGGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: LPSAQTLLSPLS*LRVQMVLGGSV
Trigger: CACAGACCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACACCCGCGACAGGACGTaGAGCACGAGGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PECGWDSLCPRPTGRRQHTRDRT*STRRAS
Trigger: GGACGCCCGCCTCGTGCTCCACGTCCTGTCGCGGGT...GTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp CCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCGACCGGGTGGGCGCTaGCGGCCTCGCGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PCALGPRGGGSTNIGDGPRPGGR*RPRVLS
Trigger: AGACAAGACGCGAGGCCGGCAGCGCCCACCCGGTCG...GGGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp CCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACGCGGGTGTGGATAGCTaGGAGGGGCGCGAGAACGCC +
Preference number: 4 (lower is better)
Translates to: PECGWDSLCPRPTGRRQHAGVDS*EGRENA
Trigger: GGCGTTCTCGCGCCCCTCGCAGCTATCCACACCCGC...GTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR TCA 90 bp CCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACGTCCTGCGCTGCCAGTaGCCACACCCAGCCCTCATG +
Preference number: 4 (lower is better)
Translates to: PECGWDSLCPRPTGRRQHVLRCQ*PHPALM
Trigger: CATGAGGGCTGGGTGTGGTCACTGGCAGCGCAGGAC...GTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp GACGCTCACCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGACCAGCGCCCATCCTCTaGCCAGCGGGACAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DAHPNVAGTPCALGPRGGPAPIL*PAGQVL
Trigger: CAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGG...TCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp GGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGAGGGTCGGGGCCAGTaGAGGAGGCGGGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GRHQLPNVAGTPCALGPREGRGQ*RRREEV
Trigger: CACCTCTTCCCGCCTCCTGCACTGGCCCCGACCCTC...CCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp AATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACTCCATTGCGACCGGGTaGGCGCTGCCGGCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: NVAGTPCALGPRGGGSTNSIATG*ALPASR
Trigger: ACGCGAGGCCGGCAGCGCCCACCCGGTCGCAATGGA...GTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGCTCAGGTCCATTGCGACCGGGTaGGCGCTGCCGGCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: EEAQPPAGSIHIHAHLLRSIATG*ALPASR
Trigger: ACGCGAGGCCGGCAGCGCCCACCCGGTCGCAATGGA...CCTGAGCAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACGGGCTGGGCCGGCTCTaGGGTCGTAGATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: PECGWDSLCPRPTGRRQHGLGRL*GRRWSP
Trigger: AGGTGACCATCTACGACCCCAGAGCCGGCCCAGCCC...GTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GGGCCAGTGCAGGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGTGCCACCCTTCCACCACTaGGTAGGGCGCGCGTACGCG +
Preference number: 4 (lower is better)
Translates to: GPVQEAGRGGNTWARGQVPPFHH*VGRAYA
Trigger: CGCGTACGCGCGCCCTACCCAGTGGTGGAAGGGTGG...CACCTGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCCTGCACTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 72 bp CGGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTaGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: RPPPTPECGWDS*CPRPTGRRQHQ
Trigger: TTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp GACGCTCACCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGACACACGCGGTGGTCCTaGGCTGCCAGTGACCACACC +
Preference number: 4 (lower is better)
Translates to: DAHPNVAGTPCALGPRGGHTRWS*AASDHT
Trigger: GGTGTGGTCACTGGCAGCGCAGGACCACCGCGTGTG...TCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp CTGAACCCCAATTTCACCCTTCCCCCGGGCATAGGGCCCAGGCCAGGACGCTCAGGCTGGGACTCCTTGTaGCCTAGGCCCACGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LNPNFTLPPGIGPRPGRSGWDSL*PRPTGR
Trigger: CCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC...TGAGCGTCCTGGCCTGGGCCCTATGCCCGGGGGAAGGGTGAAATTGGGGTTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp ACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGGGCTGGGACTCCTTGTaGCCTAGGCCCACGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TEEEAQPPAGSIHIHAHLGWDSL*PRPTGR
Trigger: CCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC...CAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGGCCAGGGGACAGGTaGATGCCTGGGTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWGPGDR*MPGSGL
Trigger: CAGACCAGACCCAGGCATGCACCTGTCCCCTGGCCC...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCGCCAGCCCGGATTTTaGCGGACTGAGAACGCGGGC +
Preference number: 4 (lower is better)
Translates to: PCALGPRGGGSTNIGDGPRQPGF*RTENAG
Trigger: GCCCGCGTTCTCAGTCCGCCAAAATCCGGGCTGGCG...GGGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp TGCAGACGCTGCAGGACGCTGTTGGCTCGGCGGTCCACCACCACCAGGGTGTGGCGCCAGCCCGGATTTTaGCGGACTGAGAACGCGGGC +
Preference number: 4 (lower is better)
Translates to: CRRCRTLLARRSTTTRVWRQPGF*RTENAG
Trigger: GCCCGCGTTCTCAGTCCGCCAAAATCCGGGCTGGCG...CCACACCCTGGTGGTGGTGGACCGCCGAGCCAACAGCGTCCTGCAGCGTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCGGGACGCGGCGGGTGTaGATAGCTGCGAGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PKNRGGSPASGRQYPHPRGTRRV*IAARGA
Trigger: CGCGCCCCTCGCAGCTATCCACACCCGCCGCGTCCC...GCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp ACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGAGGTCGCGGAGCGCGTaGCACACCCGCGACAGGACG +
Preference number: 4 (lower is better)
Translates to: TEEEAQPPAGSIHIHAHLRSRSA*HTRDRT
Trigger: CGTCCTGTCGCGGGTGTGCCACGCGCTCCGCGACCT...CAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGCTGCAGGACGCTGTTaGCTCGGCGGTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWAAGRC*LGGPPP
Trigger: TGGTGGTGGACCGCCGAGCCAACAGCGTCCTGCAGC...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
3UTR CAA 72 bp AGGCCAGGACGCTCACCCGAATGTGGCTGGGACTCCTaGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: RPGRSPECGWDS*CPRPTGRRQHQ
Trigger: TTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTCCTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR TCA 90 bp CGCTGTTGGCTCGGCGGTCCACCACCACCAGGGTGTGGTCCTCGCTGCCTGAGACCTCGCTGCCTGAGATaGTGTGCCGGTCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: RCWLGGPPPPGCGPRCLRPRCLR*CAGHPP
Trigger: TGGCGGATGACCGGCACATCATCTCAGGCAGCGAGG...TCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGGACCGCCGAGCCAACAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp GGGCCTGAACCCCAATTTCACCCTTCCCCCGGGCATAGGGCCCAGGCCAGGACGGCTGCTCCAGCGCAATaGAGGCTGCCGGCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: GPEPQFHPSPGHRAQARTAAPAQ*RLPASQ
Trigger: TTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGC...CGTCCTGGCCTGGGCCCTATGCCCGGGGGAAGGGTGAAATTGGGGTTCAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp CCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCCTCCAGCTGCAGACGCTaGAGGACGCTGTTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PCALGPRGGGSTNIGDGPSSCRR*RTLLAR
Trigger: CCGAGCCAACAGCGTCCTGCAGCGTCTGCAGCTGGA...GGGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGTGCTTCAACAGGGCTaGGCCGGCTCTGGGGTCGTA +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWVLQQG*AGSGVV
Trigger: TACGACCCCAGAGCCGGCCCAGCCCTGTTGAAGCAC...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGACGTGCAGCAGGCCCTaGTTGTCACCAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWTCSRP*LSPAQS
Trigger: GCTCTGGGCTGGTGACAACCAGGGCCTGCTGCACGT...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCAGGCCAGGACGCTCACCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCAGCAGCCGTTGCGGTTaGCGAAGACGTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRPGRSPECGWDSLCPRPSSRCG*RRRAAG
Trigger: GCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCT...GGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTCCTGGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp CGCTGTTGGCTCGGCGGTCCACCACCACCAGGGTGTGGTCCTCGCTGCCTGAGAAGCAGCCGTTGCGGTTaGCGAAGACGTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RCWLGGPPPPGCGPRCLRSSRCG*RRRAAG
Trigger: GCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCT...TCTCAGGCAGCGAGGACCACACCCTGGTGGTGGTGGACCGCCGAGCCAACAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCTGAACCCCAATTTCACCCTTCCCCCGGGCATAGGGCCCAGGCCAGGACGCTCTGGGAAGCGGCCCCCTaGGTGGGCCTGAACCCCAAT +
Preference number: 4 (lower is better)
Translates to: PEPQFHPSPGHRAQARTLWEAAP*VGLNPN
Trigger: ATTGGGGTTCAGGCCCACCCAGGGGGCCGCTTCCCA...GAGCGTCCTGGCCTGGGCCCTATGCCCGGGGGAAGGGTGAAATTGGGGTTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR TCA 90 bp CAGGACGCTCACCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCCTGGAGCAGCAGCACTaGGTCAACGGAAGCCACGTG +
Preference number: 4 (lower is better)
Translates to: QDAHPNVAGTPCALGPRGLEQQH*VNGSHV
Trigger: CACGTGGCTTCCGTTGACTCAGTGCTGCTGCTCCAG...GCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR TCA 90 bp CGGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGCAGGTCCCACAAGTTaGCGTTGCGATCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: RPPPTPECGWDSLCPRPTAGPTS*RCDLGS
Trigger: GCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGC...CGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp TCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCCAGCGGGACAGGTGCTaGTCCAGCGCAATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLCPRPTGRRQHQHWGWSQRDRC*SSAMQA
Trigger: AGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTG...GGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp CAGGACGCTCACCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCATCTCGCCGAACTGCTaGCCATCCGCTGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: QDAHPNVAGTPCALGPRGISPNC*PSAAMS
Trigger: GGACATGGCAGCGGATGGGCAGCAGTTCGGCGAGAT...GCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGCTGCCTGAGATGATGTaGCGGTCATCCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWLPEMM*RSSASR
Trigger: CCTGCTGGCGGATGACCGGCACATCATCTCAGGCAG...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp CGGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGCTGGAAGCAGCCGTTaGGGTTGGCGAAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: RPPPTPECGWDSLCPRPTAGSSR*GWRRRA
Trigger: TGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGC...CGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp GACGCTCACCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAAGCCTCCAGGTGACATaGTCAGACACGAGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: DAHPNVAGTPCALGPRGGSLQVT*SDTRSR
Trigger: CCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCT...TCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp CCCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCGGAGCACACGCGGTaGTCCTGCGCTGCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PQEQRRKPSLRQAVSTSTPEHTR*SCAASD
Trigger: GTCACTGGCAGCGCAGGACCACCGCGTGTGCTCCGG...CGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGACGCTCACCCGAATGTaGCTGGGACTCCTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWTLTRM*LGLLVP
Trigger: GGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGT...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp CCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCACCAGGGCCCAAGAGTaGGAAGCGGCCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PKNRGGSPASGRQYPHPRTRAQE*EAAPWV
Trigger: CACCCAGGGGGCCGCTTCCCACTCTTGGGCCCTGGT...GCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR TCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGTCTGGGTCTGTCTCTaGCTCTGGGTCCGAGTCATC +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWVWVCL*LWVRVI
Trigger: GATGACTCGGACCCAGAGTCAGAGACAGACCCAGAC...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR TCA 90 bp ACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCGGATTTTGGCGGACTaGGAACGCGGGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: TPCALGPRGGGSTNIGDGRILAD*ERGPRR
Trigger: CCTACGTGGCCCGCGTTCTCAGTCCGCCAAAATCCG...ACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR TCA 90 bp AATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACCGCGTAGCCTCCAGGTaGCATGGTCAGACACGAGGT +
Preference number: 4 (lower is better)
Translates to: NVAGTPCALGPRGGGSTNRVASR*HGQTRG
Trigger: ACCTCGTGTCTGACCATGTCACCTGGAGGCTACGCG...GTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR TCA 90 bp CCTGAACCCCAATTTCACCCTTCCCCCGGGCATAGGGCCCAGGCCAGGACGCTCGCAGGTCCCACAAGTTaGCGTTGCGATCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: PEPQFHPSPGHRAQARTLAGPTS*RCDLGS
Trigger: GCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGC...GAGCGTCCTGGCCTGGGCCCTATGCCCGGGGGAAGGGTGAAATTGGGGTTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp GCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGTGCATGCCTGGGTCTGGCTGCCTGAGATGATGTaGCGGTCATCCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGRGGNTWARGQVHAWVWLPEMM*RSSASR
Trigger: CCTGCTGGCGGATGACCGGCACATCATCTCAGGCAG...CCAGACCCAGGCATGCACCTGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp GAAGCAGCCGTTGCGGTTGGCGAAGACGTGCAGCAGGCCCTGGTTGTCACCAGCTCCAGCTGCAGACGCTaGAGGACGCTGTTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: EAAVAVGEDVQQALVVTSSSCRR*RTLLAR
Trigger: CCGAGCCAACAGCGTCCTGCAGCGTCTGCAGCTGGA...GCTGGTGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp CCTGAACCCCAATTTCACCCTTCCCCCGGGCATAGGGCCCAGGCCAGGACGCTCCGGTTGGCGAAGACGTaGAGCAGGCCCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PEPQFHPSPGHRAQARTLRLAKT*SRPWLS
Trigger: TGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCG...GAGCGTCCTGGCCTGGGCCCTATGCCCGGGGGAAGGGTGAAATTGGGGTTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp CCTGAACCCCAATTTCACCCTTCCCCCGGGCATAGGGCCCAGGCCAGGACGCTCGCTGGAAGCAGCCGTTaGGGTTGGCGAAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: PEPQFHPSPGHRAQARTLAGSSR*GWRRRA
Trigger: TGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGC...GAGCGTCCTGGCCTGGGCCCTATGCCCGGGGGAAGGGTGAAATTGGGGTTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp GGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCCAGCCTTTACGGCCGAAACCCTaGACGCGGCCCGAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSTNIGDGPPRTEEEAQPLRPKP*TRPEAP
Trigger: CGGAGCCTCGGGCCGCGTCCAGGGTTTCGGCCGTAA...AGGCTGGGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp CCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCCGGGTCAGCACGGGTCTaGAGTGTAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PCALGPRGGGSTNIGDGPGSARV*SVVAGA
Trigger: AGCACCAGCAACTACACTCCAGACCCGTGCTGACCC...GGGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCGCTGCAGGACGCTGTTaGCTCGGCGGTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSAAGRC*LGGPPP
Trigger: TGGTGGTGGACCGCCGAGCCAACAGCGTCCTGCAGC...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp TGCAGACGCTGCAGGACGCTGTTGGCTCGGCGGTCCACCACCACCAGGGTGTGGGGTGCAAATGGTCCTTaGTGGGTCTGTGGGCACGTG +
Preference number: 4 (lower is better)
Translates to: CRRCRTLLARRSTTTRVWGANGP*WVCGHV
Trigger: CACGTGCCCACAGACCCACCAAGGACCATTTGCACC...CCACACCCTGGTGGTGGTGGACCGCCGAGCCAACAGCGTCCTGCAGCGTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACAGGCAGCACCAACATTaGGGATGGTCCCCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PECGWDSLCPRPTGRRQHRQHQH*GWSPKN
Trigger: GTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCT...GTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GACGCTCACCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGATCACCCGAATGTGGCTaGGACTCCTTGTGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: DAHPNVAGTPCALGPRGGSPECG*DSLCPR
Trigger: CCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGA...TCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp GCACGGGTCTGGAGTGTAGTTGCTGGTGCTTCAACAGGGCTGGGCCGGCTCTGGATGACCCCTTCCTTGTaGGCATCCCGGCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: ARVWSVVAGASTGLGRLWMTPSL*ASRPPP
Trigger: TGGTGGCGGCCGGGATGCCCACAAGGAAGGGGTCAT...CCAGAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGACCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR TCA 90 bp GGAGGCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGTGCATGCCTGGGTGTCTGGGTCTGTCTCTaGCTCTGGGTCCGAGTCATC +
Preference number: 4 (lower is better)
Translates to: GGGKRWEHMGQGTGACLGVWVCL*LWVRVI
Trigger: GATGACTCGGACCCAGAGTCAGAGACAGACCCAGAC...ACCCAGGCATGCACCTGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR TCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCCTCGCTGCCTGAGATaGTGTGCCGGTCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSPRCLR*CAGHPP
Trigger: TGGCGGATGACCGGCACATCATCTCAGGCAGCGAGG...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR TCA 90 bp GGCCCTGGTTGTCACCAGCCCAGAGCTGGGGTTCCTGGTAGGACATGCAGAGCAGCCCGACAGACAGAGTaGCCCACCCTTCCACCACTG +
Preference number: 4 (lower is better)
Translates to: GPGCHQPRAGVPGRTCRAARQTE*PTLPPL
Trigger: CAGTGGTGGAAGGGTGGGTCACTCTGTCTGTCGGGC...TGCTCTGCATGTCCTACCAGGAACCCCAGCTCTGGGCTGGTGACAACCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp CATCCAAATCATAACAAAACCAGGGCCCAAGAGTGGGAAGCGGCCCCCTGGGTGCGACCGGGTGGGCGCTaGCGGCCTCGCGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HPNHNKTRAQEWEAAPWVRPGGR*RPRVLS
Trigger: AGACAAGACGCGAGGCCGGCAGCGCCCACCCGGTCG...CACCCAGGGGGCCGCTTCCCACTCTTGGGCCCTGGTTTTGTTATGATTTGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp GGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCCAGCCTGCCCAGCGGGACAGGTaGTGCTCCAGCGCAATGCAG +
Preference number: 4 (lower is better)
Translates to: GSTNIGDGPPRTEEEAQPAQRDR*CSSAMQ
Trigger: CTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGC...AGGCTGGGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp CCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCCGTGATGGGAAAGCTGTaGCCCACATCAAAGGACCGG +
Preference number: 4 (lower is better)
Translates to: PCALGPRGGGSTNIGDGPVMGKL*PTSKDR
Trigger: CCGGTCCTTTGATGTGGGCCACAGCTTTCCCATCAC...GGGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGTCCTTGGTGGGTCTGTaGGCACGTGCACCCGGATGG +
Preference number: 4 (lower is better)
Translates to: PQEQRRKPSLRQAVSTSTSLVGL*ARAPGW
Trigger: CCATCCGGGTGCACGTGCCCACAGACCCACCAAGGA...CGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGCTCAGGACCAACTCCCGAATGTaGCTGGGACTCCTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: EEAQPPAGSIHIHAHLLRTNSRM*LGLLVP
Trigger: GGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGT...CCTGAGCAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp TCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCAGAGGTGGGAACACATaGGCCAGGGGACAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: SLCPRPTGRRQHQHWGWSRGGNT*ARGQVH
Trigger: ATGCACCTGTCCCCTGGCCCATGTGTTCCCACCTCT...GGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR TCA 90 bp GGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCGTGGTCCTCGCTGCCTaGGATGATGTGCCGGTCATC +
Preference number: 4 (lower is better)
Translates to: GGGSTNIGDGPPRTEEEAVVLAA*DDVPVI
Trigger: GATGACCGGCACATCATCTCAGGCAGCGAGGACCAC...GGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR TCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGCAGCACAGACCCTATTaGGCCCATTGTCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWQHRPY*AHCHAF
Trigger: GAAGGCATGACAATGGGCTCAATAGGGTCTGTGCTG...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCAGTCATCGTCCCAGGTaGGGGAATCATCGCACCGCC +
Preference number: 4 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSSHRPR*GNHRTA
Trigger: GGCGGTGCGATGATTCCCGCACCTGGGACGATGACT...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp AGCTGGAAGCAGCCGTTGCGGTTGGCGAAGACGTGCAGCAGGCCCTGGTTGTCAAGTCATCGTCCCAGGTaGGGGAATCATCGCACCGCC +
Preference number: 4 (lower is better)
Translates to: SWKQPLRLAKTCSRPWLSSHRPR*GNHRTA
Trigger: GGCGGTGCGATGATTCCCGCACCTGGGACGATGACT...TGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp CCGGCCACCACCAGGTTGCCCTCAGCACAGACCCTATTGAGCCCATTGTCATGCGACTCCGTCCCCAGCTaGCGCAGGTCCCACAAGTTG +
Preference number: 4 (lower is better)
Translates to: PATTRLPSAQTLLSPLSCDSVPS*RRSHKL
Trigger: CAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTC...GCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp ACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGGAGTGTAGTTGCTGGTaGTTCAACAGGGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: TEEEAQPPAGSIHIHAHLECSCW*FNRAGP
Trigger: CGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTC...CAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGTTCCTGGTAGGACATaGAGAGCAGGTAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWVPGRT*RAGRSP
Trigger: TGGACTCCTACCTGCTCTGCATGTCCTACCAGGAAC...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp GGCCCTGGTTGTCACCAGCCCAGAGCTGGGGTTCCTGGTAGGACATGCAGAGCACGGTTGGCGAAGACGTaGAGCAGGCCCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GPGCHQPRAGVPGRTCRARLAKT*SRPWLS
Trigger: TGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCG...TGCTCTGCATGTCCTACCAGGAACCCCAGCTCTGGGCTGGTGACAACCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp CAGGGCTGGGCCGGCTCTGGGGTCGTAGATGGTCACCTTCTTGTCATAGGTGCCCGGCCACCACCAGGTTaGCCTCAGCACAGACCCTAT +
Preference number: 4 (lower is better)
Translates to: QGWAGSGVVDGHLLVIGARPPPG*PQHRPY
Trigger: ATAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCG...GGCACCTATGACAAGAAGGTGACCATCTACGACCCCAGAGCCGGCCCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp TGCAGACGCTGCAGGACGCTGTTGGCTCGGCGGTCCACCACCACCAGGGTGTGGCTGAACCAGTTGGTCTaGAGGTGTCCAAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: CRRCRTLLARRSTTTRVWLNQLV*RCPKMA
Trigger: GGCCATCTTTGGACACCTGCAGACCAACTGGTTCAG...CCACACCCTGGTGGTGGTGGACCGCCGAGCCAACAGCGTCCTGCAGCGTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp TGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTGCACGGAGCAGGCCAAGAATAGGTCGCGGAGCGCGTaGCACACCCGCGACAGGACG +
Preference number: 4 (lower is better)
Translates to: CPKMAADLLKFCTEQAKNRSRSA*HTRDRT
Trigger: CGTCCTGTCGCGGGTGTGCCACGCGCTCCGCGACCT...ATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp GCGGGAAGAGGTGGGAACACATGGGCCAGGGGACAGGTGCATGCCTGGGTCTGGCTGGAGTGTAGTTGCTaGTGCTTCAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGRGGNTWARGQVHAWVWLECSC*CFNRAG
Trigger: CCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAG...CCAGACCCAGGCATGCACCTGTCCCCTGGCCCATGTGTTCCCACCTCTTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp TCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCAAGGACCGGATAAGCTaGAAGCAGCCGTTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: SLCPRPTGRRQHQHWGWSKDRIS*KQPLRL
Trigger: CAACCGCAACGGCTGCTTCCAGCTTATCCGGTCCTT...GGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp ACCACCAGGGTGTGGTCCTCGCTGCCTGAGATGATGTGCCGGTCATCCGCCAGCGCACGTGCACCCGGATaGTCTTGTCAGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: TTRVWSSLPEMMCRSSASARAPG*SCQWMW
Trigger: CCACATCCACTGACAAGACCATCCGGGTGCACGTGC...GCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp ACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTGCCTTCGGGTGCAAATaGTCCTTGGTGGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TPCALGPRGGGSTNIGDGAFGCK*SLVGLW
Trigger: CCACAGACCCACCAAGGACCATTTGCACCCGAAGGC...ACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp ACCACCAGGGTGTGGTCCTCGCTGCCTGAGATGATGTGCCGGTCATCCGCCAGCGCCTTCGGGTGCAAATaGTCCTTGGTGGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TTRVWSSLPEMMCRSSASAFGCK*SLVGLW
Trigger: CCACAGACCCACCAAGGACCATTTGCACCCGAAGGC...GCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp GGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGCACCAACATTGGGGATaGTCCCCCAAGAACAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRHQLPNVAGTPCALGPRHQHWG*SPKNRG
Trigger: TCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTG...CCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR TCA 90 bp TGCAGGTGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTGCACGGAGCAGGCCGTGGTCCTCGCTGCCTaGGATGATGTGCCGGTCATC +
Preference number: 4 (lower is better)
Translates to: CRCPKMAADLLKFCTEQAVVLAA*DDVPVI
Trigger: GATGACCGGCACATCATCTCAGGCAGCGAGGACCAC...GGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACACCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR TCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCTGGGTCTGGTCTGGCTaGACCAGTTGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSWVWSG*TSWSAG
Trigger: ACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCA...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp ACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCAGCGCAATGCAGGCTaGCGGCCAGTCAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TPCALGPRGGGSTNIGDGQRNAG*RPVKVL
Trigger: AAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTG...ACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp AGCTGGAAGCAGCCGTTGCGGTTGGCGAAGACGTGCAGCAGGCCCTGGTTGTCAGAGTGTAGTTGCTGGTaGTTCAACAGGGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SWKQPLRLAKTCSRPWLSECSCW*FNRAGP
Trigger: CGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTC...TGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTCCTTGGTGGGTCTGTGACCCGCGACAGGACGTaGAGCACGAGGCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LLSPLSCLRVQMVLGGSVTRDRT*STRRAS
Trigger: GGACGCCCGCCTCGTGCTCCACGTCCTGTCGCGGGT...CACAGACCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCGGCCACCACCAGGTTGCCCTCAGCACAGACCCTATTGAGCCCATTGTCATGCAGCCTCCAGGTGACATaGTCAGACACGAGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: PATTRLPSAQTLLSPLSCSLQVT*SDTRSR
Trigger: CCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCT...GCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp GGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCCAGCCTTCAACGGAAGCCACGTaGCCTTCGGCCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSTNIGDGPPRTEEEAQPSTEAT*PSARQK
Trigger: CTTCTGCCTGGCCGAAGGCCACGTGGCTTCCGTTGA...AGGCTGGGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCAGAGTGACCCACCCTaGAGCAGCAGCACTGAGTCA +
Preference number: 4 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSQSDPP*SSSTES
Trigger: TGACTCAGTGCTGCTGCTCCAGGGTGGGTCACTCTG...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp ACCACCAGGGTGTGGTCCTCGCTGCCTGAGATGATGTGCCGGTCATCCGCCAGCGTCTTGATCAGAACCTaGTTGGACTCCGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TTRVWSSLPEMMCRSSASVLIRT*LDSVPS
Trigger: GCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGAC...GCTGGCGGATGACCGGCACATCATCTCAGGCAGCGAGGACCACACCCTGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCAGGCCAGGACGCTCACCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCCTCTGGGGTCGTAGATaGTCACCTTCTTGTCATAGG +
Preference number: 4 (lower is better)
Translates to: PRPGRSPECGWDSLCPRPLWGRR*SPSCHR
Trigger: CCTATGACAAGAAGGTGACCATCTACGACCCCAGAG...GGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGTGAGCGTCCTGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp ACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCTGGAGTGTAGTTGCTaGTGCTTCAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TPCALGPRGGGSTNIGDGLECSC*CFNRAG
Trigger: CCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAG...ACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCGCACGTGCACCCGGATaGTCTTGTCAGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PKNRGGSPASGRQYPHPRARAPG*SCQWMW
Trigger: CCACATCCACTGACAAGACCATCCGGGTGCACGTGC...GCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCGGTGCAAATGGTCCTTaGTGGGTCTGTGGGCACGTG +
Preference number: 4 (lower is better)
Translates to: PKNRGGSPASGRQYPHPRGANGP*WVCGHV
Trigger: CACGTGCCCACAGACCCACCAAGGACCATTTGCACC...GCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp ACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTAGGCAGCACCAACATTaGGGATGGTCCCCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TPCALGPRGGGSTNIGDGRQHQH*GWSPKN
Trigger: GTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCT...ACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCACTCCCGAATGTGGCTaGGACTCCTTGTGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSTPECG*DSLCPR
Trigger: CCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGT...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCTGCCTGGGTCTGGTCTaGCTGAACCAGTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PKNRGGSPASGRQYPHPRCLGLV*LNQLVC
Trigger: GCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCA...GCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp GTCTGGAGTGTAGTTGCTGGTGCTTCAACAGGGCTGGGCCGGCTCTGGGGTCGTTGGAGCAGCTCCAGATaGAGGCAGGCATCGACCAAG +
Preference number: 4 (lower is better)
Translates to: VWSVVAGASTGLGRLWGRWSSSR*RQASTK
Trigger: CTTGGTCGATGCCTGCCTCCATCTGGAGCTGCTCCA...ACGACCCCAGAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 72 bp AGTTCTGCACGGAGCAGGCCAAGAATGACCCCTTCCTaGTGGGCATCCCGGCCGCCACCAACTCCCGAATGT +
Preference number: 4 (lower is better)
Translates to: SSARSRPRMTPS*WASRPPPTPEC
Trigger: ACATTCGGGAGTTGGTGGCGGCCGGGATGCCCACAAGGAAGGGGTCATTCTTGGCCTGCTCCGTGCAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR TCA 90 bp CACCCGGATGGTCTTGTCAGTGGATGTGGTGTACAAGGCTCCCACGGAGTACTGCGGATTTTGGCGGACTaGGAACGCGGGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: HPDGLVSGCGVQGSHGVLRILAD*ERGPRR
Trigger: CCTACGTGGCCCGCGTTCTCAGTCCGCCAAAATCCG...CAGTACTCCGTGGGAGCCTTGTACACCACATCCACTGACAAGACCATCCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR TCA 90 bp CATCCAAATCATAACAAAACCAGGGCCCAAGAGTGGGAAGCGGCCCCCTGGGTGGAGGCACAGCACGGCTaGGCTGGCCTTTATCTCGCC +
Preference number: 4 (lower is better)
Translates to: HPNHNKTRAQEWEAAPWVEAQHG*AGLYLA
Trigger: GGCGAGATAAAGGCCAGCTCAGCCGTGCTGTGCCTC...CACCCAGGGGGCCGCTTCCCACTCTTGGGCCCTGGTTTTGTTATGATTTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR TCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCAGTACTGGATCCCAGTaGTGGGAAAGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSSTGSQ*WESCGP
Trigger: TGGGCCACAGCTTTCCCATCACTGGGATCCAGTACT...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR GCA 90 bp CATCCAAATCATAACAAAACCAGGGCCCAAGAGTGGGAAGCGGCCCCCTGGGTGGACTCCGTCCCCAGCTaGCGCAGGTCCCACAAGTTG +
Preference number: 4 (lower is better)
Translates to: HPNHNKTRAQEWEAAPWVDSVPS*RRSHKL
Trigger: CAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTC...CACCCAGGGGGCCGCTTCCCACTCTTGGGCCCTGGTTTTGTTATGATTTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp TCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCTTGAGCCCATTGTCATaGCTTCGGGTGCAAATGGTC +
Preference number: 4 (lower is better)
Translates to: SLCPRPTGRRQHQHWGWSLSPLS*LRVQMV
Trigger: GACCATTTGCACCCGAAGGCATGACAATGGGCTCAA...GGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GCATGCCTGGGTCTGGTCTGGCTGAACCAGTTGGTCTGCAGGTGTCCAAAGATGGTGCTTCAACAGGGCTaGGCCGGCTCTGGGGTCGTA +
Preference number: 4 (lower is better)
Translates to: ACLGLVWLNQLVCRCPKMVLQQG*AGSGVV
Trigger: TACGACCCCAGAGCCGGCCCAGCCCTGTTGAAGCAC...CATCTTTGGACACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp TCTGTGGGCACGTGCACCCGGATGGTCTTGTCAGTGGATGTGGTGTACAAGGCTACGTGCAGCAGGCCCTaGTTGTCACCAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SVGTCTRMVLSVDVVYKATCSRP*LSPAQS
Trigger: GCTCTGGGCTGGTGACAACCAGGGCCTGCTGCACGT...AGCCTTGTACACCACATCCACTGACAAGACCATCCGGGTGCACGTGCCCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp GGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCGCTCCCACGGAGTACTaGATCCCAGTGATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GGGSTNIGDGPPRTEEEAAPTEY*IPVMGK
Trigger: CTTTCCCATCACTGGGATCCAGTACTCCGTGGGAGC...GGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGGCTCCCACGGAGTACTaGATCCCAGTGATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PQEQRRKPSLRQAVSTSTAPTEY*IPVMGK
Trigger: CTTTCCCATCACTGGGATCCAGTACTCCGTGGGAGC...CGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp ACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGCACCAACATTGGGGATaGTCCCCCAAGAACAGAGGA +
Preference number: 4 (lower is better)
Translates to: TEEEAQPPAGSIHIHAHLHQHWG*SPKNRG
Trigger: TCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTG...CAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp TGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTGCACGGAGCAGGCCAAGAATGGAGGCGGGAAGAGGTaGGAACACATGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CPKMAADLLKFCTEQAKNGGGKR*EHMGQG
Trigger: CCCCTGGCCCATGTGTTCCCACCTCTTCCCGCCTCC...ATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CACCCGGATGGTCTTGTCAGTGGATGTGGTGTACAAGGCTCCCACGGAGTACTGAGGCCCTCTGGGCAGTaGAGCAGCTCCAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: HPDGLVSGCGVQGSHGVLRPSGQ*SSSRWR
Trigger: CCTCCATCTGGAGCTGCTCCACTGCCCAGAGGGCCT...CAGTACTCCGTGGGAGCCTTGTACACCACATCCACTGACAAGACCATCCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 72 bp TCAAAGGACCGGATAAGCTGGAAGCAGCCGTTGCGGTaGGCGAAGACGTGCAGCAGGCCCTGGTTGTCACCA +
Preference number: 4 (lower is better)
Translates to: SKDRISWKQPLR*AKTCSRPWLSP
Trigger: TGGTGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGCTTATCCGGTCCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 72 bp TCTAGCGACAGGTCTCCAGAGCCGGCCACCACCAGGTaGCCCTCAGCACAGACCCTATTGAGCCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: SSDRSPEPATTR*PSAQTLLSPLS
Trigger: TGACAATGGGCTCAATAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCGGCTCTGGAGACCTGTCGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 72 bp ACAGGTGCATGCCTGGGTCTGGTCTGGCTGAACCAGTaGGTCTGCAGGTGTCCAAAGATGGCCGCCGATCTG +
Preference number: 4 (lower is better)
Translates to: TGACLGLVWLNQ*VCRCPKMAADL
Trigger: CAGATCGGCGGCCATCTTTGGACACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCATGCACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp GGCCCTGGTTGTCACCAGCCCAGAGCTGGGGTTCCTGGTAGGACATGCAGAGCAGGTCTGGAGTGTAGTTaGTGGTGCTTCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPGCHQPRAGVPGRTCRAGLECS*WCFNRA
Trigger: AGCCCTGTTGAAGCACCAGCAACTACACTCCAGACC...TGCTCTGCATGTCCTACCAGGAACCCCAGCTCTGGGCTGGTGACAACCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp GGCCCTGGTTGTCACCAGCCCAGAGCTGGGGTTCCTGGTAGGACATGCAGAGCATGTCATGCCTTCGGGTaGAAATGGTCCTTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GPGCHQPRAGVPGRTCRACHAFG*KWSLVG
Trigger: ACCCACCAAGGACCATTTGCACCCGAAGGCATGACA...TGCTCTGCATGTCCTACCAGGAACCCCAGCTCTGGGCTGGTGACAACCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp GCCCTCAGCACAGACCCTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTACATCCACGCCCACCTaGTCAGGCCTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALSTDPIEPIVMPSGANGTSTPT*SGLQPP
Trigger: TGGAGGCTGCAGGCCTGAGCAGGTGGGCGTGGATGT...ACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp ACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGGATCTGCTGAAGTTCTaGACGGAGCAGGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TEEEAQPPAGSIHIHAHLDLLKF*TEQAKN
Trigger: ATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATC...CAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp TGCAGGTGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTGCACGGAGCAGGCCGTGATGGGAAAGCTGTaGCCCACATCAAAGGACCGG +
Preference number: 4 (lower is better)
Translates to: CRCPKMAADLLKFCTEQAVMGKL*PTSKDR
Trigger: CCGGTCCTTTGATGTGGGCCACAGCTTTCCCATCAC...GGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACACCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCTCTTGTCAGTGGATGTaGTGTACAAGGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSSCQWM*CTRLPR
Trigger: CCGTGGGAGCCTTGTACACCACATCCACTGACAAGA...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp GGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCTCTTGTCAGTGGATGTaGTGTACAAGGCTCCCACGG +
Preference number: 4 (lower is better)
Translates to: GGGSTNIGDGPPRTEEEASCQWM*CTRLPR
Trigger: CCGTGGGAGCCTTGTACACCACATCCACTGACAAGA...GGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR TCA 90 bp CGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAAGAGCCCCCTGGGTGGGCCTaGACCCCAATTTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: RSQLRAGHPNHNKTRAQEPPGWA*TPISPF
Trigger: GAAGGGTGAAATTGGGGTTCAGGCCCACCCAGGGGG...CTCTTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR TCA 90 bp CTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTCCTTGGTGGGTCTGTGTGGCCGCCGATCTGCTaGAGTTCTGCACGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSPLSCLRVQMVLGGSVWPPIC*SSARSR
Trigger: CCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCA...CACAGACCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp CCGGCCACCACCAGGTTGCCCTCAGCACAGACCCTATTGAGCCCATTGTCATGCGTTCCTGGTAGGACATaGAGAGCAGGTAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PATTRLPSAQTLLSPLSCVPGRT*RAGRSP
Trigger: TGGACTCCTACCTGCTCTGCATGTCCTACCAGGAAC...GCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp CCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCTTGAGCCCATTGTCATaGCTTCGGGTGCAAATGGTC +
Preference number: 4 (lower is better)
Translates to: PKNRGGSPASGRQYPHPRLSPLS*LRVQMV
Trigger: GACCATTTGCACCCGAAGGCATGACAATGGGCTCAA...GCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp CCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCACACCCAGCCCTCATaGGTACTATTTCGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: PKNRGGSPASGRQYPHPRHTQPS*VLFRLV
Trigger: CACTAAGCGAAATAGTACCCATGAGGGCTGGGTGTG...GCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp GGCCCTGGTTGTCACCAGCCCAGAGCTGGGGTTCCTGGTAGGACATGCAGAGCACTCTGGGGTCGTAGATaGTCACCTTCTTGTCATAGG +
Preference number: 4 (lower is better)
Translates to: GPGCHQPRAGVPGRTCRALWGRR*SPSCHR
Trigger: CCTATGACAAGAAGGTGACCATCTACGACCCCAGAG...TGCTCTGCATGTCCTACCAGGAACCCCAGCTCTGGGCTGGTGACAACCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp CATCCAAATCATAACAAAACCAGGGCCCAAGAGTGGGAAGCGGCCCCCTGGGTGGGGTCAGCACGGGTCTaGAGTGTAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HPNHNKTRAQEWEAAPWVGSARV*SVVAGA
Trigger: AGCACCAGCAACTACACTCCAGACCCGTGCTGACCC...CACCCAGGGGGCCGCTTCCCACTCTTGGGCCCTGGTTTTGTTATGATTTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp GGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCGGATGGTCTTGTCAGTaGATGTGGTGTACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GGGSTNIGDGPPRTEEEAGWSCQ*MWCTRL
Trigger: GAGCCTTGTACACCACATCCACTGACAAGACCATCC...GGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CCA 90 bp CGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAAGAGTCCTTGGTGGGTCTGTaGGCACGTGCACCCGGATGG +
Preference number: 4 (lower is better)
Translates to: RSQLRAGHPNHNKTRAQESLVGL*ARAPGW
Trigger: CCATCCGGGTGCACGTGCCCACAGACCCACCAAGGA...CTCTTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp GGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCCTGAGCTGGCCCTCATaGGTACTATTTCGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: GGGSTNIGDGPPRTEEEALSWPS*VLFRLV
Trigger: CACTAAGCGAAATAGTACCCATGAGGGCCAGCTCAG...GGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp CTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAAACATCCACGCCCACCTaGTCAGGCCTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRSQLRAGHPNHNKTRAQTSTPT*SGLQPP
Trigger: TGGAGGCTGCAGGCCTGAGCAGGTGGGCGTGGATGT...TTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp CACCCGGATGGTCTTGTCAGTGGATGTGGTGTACAAGGCTCCCACGGAGTACTGAAGGACCGGATAAGCTaGAAGCAGCCGTTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: HPDGLVSGCGVQGSHGVLKDRIS*KQPLRL
Trigger: CAACCGCAACGGCTGCTTCCAGCTTATCCGGTCCTT...CAGTACTCCGTGGGAGCCTTGTACACCACATCCACTGACAAGACCATCCGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp GTGTACAAGGCTCCCACGGAGTACTGGATCCCAGTGATGGGAAAGCTGTGGCCCACAGCACGGCTGAGCTaGCCCTCATGGGTACTATTT +
Preference number: 4 (lower is better)
Translates to: VYKAPTEYWIPVMGKLWPTARLS*PSWVLF
Trigger: AAATAGTACCCATGAGGGCCAGCTCAGCCGTGCTGT...GGGCCACAGCTTTCCCATCACTGGGATCCAGTACTCCGTGGGAGCCTTGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
3UTR CAA 72 bp ACCAGGTTGCCCTCAGCACAGACCCTATTGAGCCCATaGTCATGCCTTCGGGTGCAAATGGTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TRLPSAQTLLSP*SCLRVQMVLGG
Trigger: CCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGCAACCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR GCA 90 bp CATCCAAATCATAACAAAACCAGGGCCCAAGAGTGGGAAGCGGCCCCCTGGGTGGGTCTGGAGTGTAGTTaGTGGTGCTTCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: HPNHNKTRAQEWEAAPWVGLECS*WCFNRA
Trigger: AGCCCTGTTGAAGCACCAGCAACTACACTCCAGACC...CACCCAGGGGGCCGCTTCCCACTCTTGGGCCCTGGTTTTGTTATGATTTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp TCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACTTACGGCCGAAACCCTaGACGCGGCCCGAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SGLFLLRSQLRAGHPNHNLRPKP*TRPEAP
Trigger: CGGAGCCTCGGGCCGCGTCCAGGGTTTCGGCCGTAA...GTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR TCA 90 bp CCTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTCCTTGGTGGGTCTGTAGTACTGGATCCCAGTaGTGGGAAAGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PIEPIVMPSGANGPWWVCSTGSQ*WESCGP
Trigger: TGGGCCACAGCTTTCCCATCACTGGGATCCAGTACT...ACAGACCCACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CCA 90 bp AACATGTCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATGGGCTGGGCCGGCTCTaGGGTCGTAGATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: NMSGLFLLRSQLRAGHPNGLGRL*GRRWSP
Trigger: AGGTGACCATCTACGACCCCAGAGCCGGCCCAGCCC...ATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGACATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp AACATGTCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCTTCTCTTCCACCACTaGGTAGGGCGCGCGTACGCG +
Preference number: 4 (lower is better)
Translates to: NMSGLFLLRSQLRAGHPNLLFHH*VGRAYA
Trigger: CGCGTACGCGCGCCCTACCCAGTGGTGGAAGAGAAG...ATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGACATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp CTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAAGTCTTGATCAGAACCTaGTTGGACTCCGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRSQLRAGHPNHNKTRAQVLIRT*LDSVPS
Trigger: GCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGAC...TTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp CTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAATGTCATGCCTTCGGGTaGAAATGGTCCTTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LRSQLRAGHPNHNKTRAQCHAFG*KWSLVG
Trigger: ACCCACCAAGGACCATTTGCACCCGAAGGCATGACA...TTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp TCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACCGGCCACCACCAGGTTaGCCTCAGCACAGACCCTAT +
Preference number: 4 (lower is better)
Translates to: SGLFLLRSQLRAGHPNHNRPPPG*PQHRPY
Trigger: ATAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCG...GTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CCA 90 bp GCACAGACCCTATTGAGCCCATTGTCATGCCTTCGGGTGCAAATGGTCCTTGGTGGATGGTCTTGTCAGTaGATGTGGTGTACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: AQTLLSPLSCLRVQMVLGGWSCQ*MWCTRL
Trigger: GAGCCTTGTACACCACATCCACTGACAAGACCATCC...ACCAAGGACCATTTGCACCCGAAGGCATGACAATGGGCTCAATAGGGTCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR TCA 90 bp AAGCACCAACATGTCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCACAGCACAGACCCTATTaGGCCCATTGTCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: KHQHVRFISPSLSTESGAQHRPY*AHCHAF
Trigger: GAAGGCATGACAATGGGCTCAATAGGGTCTGTGCTG...TGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGACATGTTGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR TCA 90 bp AACATGTCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATTCCTTCGCTCTCAACTaGGAGCGGGGCATCCAAATC +
Preference number: 4 (lower is better)
Translates to: NMSGLFLLRSQLRAGHPNSFALN*ERGIQI
Trigger: GATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGA...ATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGACATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR GCA 90 bp AACATGTCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATTTTATCTCGCCGAACTaGTGCCCATCCGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: NMSGLFLLRSQLRAGHPNFISPN*CPSAAM
Trigger: CATGGCAGCGGATGGGCAGCAGTTCGGCGAGATAAA...ATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGACATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS CCA 90 bp CCGGGGGAAGGCTCAGAAGGCCCGGCTCACTTACGGCCGAAACCCTaGACGCGGCCCGAGGCTCCGAAGCGCTCGGGGACGCGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: PGEGSEGPAHLRPKP*TRPEAPKRSGTRRV
Trigger: CACCCGCCGCGTCCCCGAGCGCTTCGGAGCCTCGGGCCGCGTCCAGGGTTTCGGCCGTAAGTGAGCCGGGCCTTCTGAGCCTTCCCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS TCA 90 bp CTGGGTAGGGCGCGCGTACGCGGCGTAGCGCGCGTAGCCTCCAGGTaGCATGGTCAGACACGAGGTCGCGGAGCGCGTGGCACACCCGCG +
Preference number: 5 (lower is better)
Translates to: LGRARVRGVARVASR*HGQTRGRGARGTPA
Trigger: CGCGGGTGTGCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCTACGCGCGCTACGCCGCGTACGCGCGCCCTACCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS CCA 90 bp CGTAGCCTCCAGGTGACATGGTCAGACACGAGGTCGCGGAGCGCGTaGCACACCCGCGACAGGACGTGGAGCACGAGGCGGGCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RSLQVTWSDTRSRSA*HTRDRTWSTRRASR
Trigger: CCTGGACGCCCGCCTCGTGCTCCACGTCCTGTCGCGGGTGTGCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCTACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS TCA 90 bp ATAGCTGCGAGGGGCGCGAGAACGCCAGCCCGGATTTTGGCGGACTaGGAACGCGGGCCACGTAGGCCTTGGCCTGCGCGTCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: IAARGARTPARILAD*ERGPRRPWPARLGL
Trigger: CAGACCCAGACGCGCAGGCCAAGGCCTACGTGGCCCGCGTTCTCAGTCCGCCAAAATCCGGGCTGGCGTTCTCGCGCCCCTCGCAGCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS TCA 90 bp CCGGCCAGTCAAAGTTCTTGCGGCGTAGCGCGCGTAGCCTCCAGGTaGCATGGTCAGACACGAGGTCGCGGAGCGCGTGGCACACCCGCG +
Preference number: 5 (lower is better)
Translates to: PASQSSCGVARVASR*HGQTRGRGARGTPA
Trigger: CGCGGGTGTGCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCTACGCGCGCTACGCCGCAAGAACTTTGACTGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS GCA 90 bp GTGGCCTTCGGCCAGGCAGAAGTATTCGACCCAGCGCCCATCCTCTaGCCAGCGGGACAGGTGCTGCTCCAGCGCAATGCAGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: VAFGQAEVFDPAPIL*PAGQVLLQRNAGCR
Trigger: CCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGGGTCGAATACTTCTGCCTGGCCGAAGGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS GCA 90 bp CGCCGAACTGCTGCCCATCCGCTGCCATGTCCCAGAGCTTCACTGTaGTGTCCCAGGAGCCGGAGCACACGCGGTGGTCCTGCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RRTAAHPLPCPRASL*CPRSRSTRGGPALP
Trigger: TGGCAGCGCAGGACCACCGCGTGTGCTCCGGCTCCTGGGACAGCACAGTGAAGCTCTGGGACATGGCAGCGGATGGGCAGCAGTTCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS GCA 90 bp AGCGCCCATCCTCTGCCCAGCGGGACAGGTGCTGCTCCAGCGCAATaGAGGCTGCCGGCCAGTCAAAGTTCTTGCGGCGTAGCGCGCGTA +
Preference number: 5 (lower is better)
Translates to: SAHPLPSGTGAAPAQ*RLPASQSSCGVARV
Trigger: TACGCGCGCTACGCCGCAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS-3UTR CAA 90 bp GAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGCTCAGGTGCAGCAGGCCCTGGTaGTCACCAGCCCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EEAQPPAGSIHIHAHLLRCSRPW*SPAQSW
Trigger: CCAGCTCTGGGCTGGTGACAACCAGGGCCTGCTGCA...CCTGAGCAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CAA 90 bp GGCCGCCACCAACTCCCGAATGTGGCTGGGACTCCTTGTGCCCTAGGCCCACGGAAGCAGCCGTTGCGGTaGGCGAAGACGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GRHQLPNVAGTPCALGPRKQPLR*AKTCSR
Trigger: CCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTT...CCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACATTCGGGAGTTGGTGGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS CCA 90 bp CAGTCAAAGTTCTTGCGGCGTAGCGCGCGTAGCCTCCAGGTGACATaGTCAGACACGAGGTCGCGGAGCGCGTGGCACACCCGCGACAGG +
Preference number: 5 (lower is better)
Translates to: QSKFLRRSARSLQVT*SDTRSRSAWHTRDR
Trigger: CCTGTCGCGGGTGTGCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCTACGCGCGCTACGCCGCAAGAACTTTGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS-3UTR CAA 90 bp CTGAACCCCAATTTCACCCTTCCCCCGGGCATAGGGCCCAGGCCAGGACGCTCACCGGCCACCACCAGGTaGCCCTCAGCACAGACCCTA +
Preference number: 5 (lower is better)
Translates to: LNPNFTLPPGIGPRPGRSPATTR*PSAQTL
Trigger: TAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCGG...TGAGCGTCCTGGCCTGGGCCCTATGCCCGGGGGAAGGGTGAAATTGGGGTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp ACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGCCGGCCACCACCAGGTaGCCCTCAGCACAGACCCTA +
Preference number: 5 (lower is better)
Translates to: TEEEAQPPAGSIHIHAHLPATTR*PSAQTL
Trigger: TAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCGG...CAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp GGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCTGTGGCTGGGACTCCTaGTGCCCTAGGCCCACGGGG +
Preference number: 5 (lower is better)
Translates to: GGGSTNIGDGPPRTEEEACGWDS*CPRPTG
Trigger: CCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACA...GGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS TCA 90 bp AACGCGGGCCACGTAGGCCTTGGCCTGCGCGTCTGGGTCTGTCTCTaGCTCTGGGTCCGAGTCATCGTCCCAGGTGCGGGAATCATCGCA +
Preference number: 5 (lower is better)
Translates to: NAGHVGLGLRVWVCL*LWVRVIVPGAGIIA
Trigger: TGCGATGATTCCCGCACCTGGGACGATGACTCGGACCCAGAGTCAGAGACAGACCCAGACGCGCAGGCCAAGGCCTACGTGGCCCGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS GCA 90 bp TGCCGGTCATCCGCCAGCAGGGTCAGCACGGGTCTGGAGTGTAGTTaGTGGTGCTTCAACAGGGCTGGGCCGGCTTCATGGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: CRSSASRVSTGLECS*WCFNRAGPASWVMG
Trigger: GCCCATCACCCATGAAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGACCCGTGCTGACCCTGCTGGCGGATGACCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS CCA 90 bp TCCCAGAGCTTCACTGTGCTGTCCCAGGAGCCGGAGCACACGCGGTaGTCCTGCGCTGCCAGTGACCACACCCAGCCCTCATGGGTACTA +
Preference number: 5 (lower is better)
Translates to: SQSFTVLSQEPEHTR*SCAASDHTQPSWVL
Trigger: TAGTACCCATGAGGGCTGGGTGTGGTCACTGGCAGCGCAGGACCACCGCGTGTGCTCCGGCTCCTGGGACAGCACAGTGAAGCTCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS-3UTR CAA 90 bp TCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGGATGGTCCTCCCACAAGTTGACGTaGCGATCTCGGGAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: SLCPRPTGRRQHQHWGWSSHKLT*RSREPD
Trigger: GTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGA...GGACCATCCCCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp GGGCCTGAACCCCAATTTCACCCTTCCCCCGGGCATAGGGCCCAGGCCAGGACGTTGATCAGAACCTGGTaGGACTCCGTCCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GPEPQFHPSPGHRAQARTLIRTW*DSVPSC
Trigger: GCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAA...CGTCCTGGCCTGGGCCCTATGCCCGGGGGAAGGGTGAAATTGGGGTTCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp GGGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCTGCAGCAGGCCCTGGTaGTCACCAGCCCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRRQHQHWGWSPKNRGGSCSRPW*SPAQSW
Trigger: CCAGCTCTGGGCTGGTGACAACCAGGGCCTGCTGCA...GCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp ACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGAAGCAGCCGTTGCGGTaGGCGAAGACGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TEEEAQPPAGSIHIHAHLKQPLR*AKTCSR
Trigger: CCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTT...CAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp GGCTGGGACTCCTTGTGCCCTAGGCCCACGGGGCGGAGGCAGCACCAACATTGGGAGGCAGCACCAACATaGGGGATGGTCCCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: GWDSLCPRPTGRRQHQHWEAAPT*GMVPQE
Trigger: TTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTC...CCAATGTTGGTGCTGCCTCCGCCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp GCACGGGTCTGGAGTGTAGTTGCTGGTGCTTCAACAGGGCTGGGCCGGCTCTGGAGAATGACCCCTTCCTaGTGGGCATCCCGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: ARVWSVVAGASTGLGRLWRMTPS*WASRPP
Trigger: TGGCGGCCGGGATGCCCACAAGGAAGGGGTCATTCT...CCAGAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGACCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS TCA 90 bp GAACCTGGTTGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAGTTaGCGTTGCGATCTCGGGAGCCCGACAGACAGAGTGACCCACCCT +
Preference number: 5 (lower is better)
Translates to: EPGWTPSPAAAGPTS*RCDLGSPTDRVTHP
Trigger: AGGGTGGGTCACTCTGTCTGTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS TCA 90 bp AGTGTAGTTGCTGGTGCTTCAACAGGGCTGGGCCGGCTTCATGGGTaGTGGGCCGGTGAGGAGGGATATCAGAGCCCCTCGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: SVVAGASTGLGRLHG*WAGEEGYQSPSKAP
Trigger: GGGGGCCTTCGAGGGGCTCTGATATCCCTCCTCACCGGCCCATCACCCATGAAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS GCA 90 bp CGTCTGGGTCTGTCTCTGACTCTGGGTCCGAGTCATCGTCCCAGGTaGGGGAATCATCGCACCGCCCTAGGGGAAGCTCCATTGCGACCG +
Preference number: 5 (lower is better)
Translates to: RLGLSLTLGPSHRPR*GNHRTALGEAPLRP
Trigger: CGGTCGCAATGGAGCTTCCCCTAGGGCGGTGCGATGATTCCCGCACCTGGGACGATGACTCGGACCCAGAGTCAGAGACAGACCCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS GCA 90 bp ATCCTCTGCCCAGCGGGACAGGTGCTGCTCCAGCGCAATGCAGGCTaGCGGCCAGTCAAAGTTCTTCTCTTCCACCACTGGGTAGGGCGC +
Preference number: 5 (lower is better)
Translates to: ILCPAGQVLLQRNAG*RPVKVLLFHHWVGR
Trigger: GCGCCCTACCCAGTGGTGGAAGAGAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS GCA 90 bp AGCGCCCATCCTCTGCCCAGCGGGACAGGTGCTGCTCCAGCGCAATaGAGGCTGCCGGCCAGTCAAAGTTCTTCTCTTCCACCACTGGGT +
Preference number: 5 (lower is better)
Translates to: SAHPLPSGTGAAPAQ*RLPASQSSSLPPLG
Trigger: ACCCAGTGGTGGAAGAGAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS GCA 90 bp AGCTTCACTGTGCTGTCCCAGGAGCCGGAGCACACGCGGTGGTCCTaGGCTGCCAGTGACCACACCCAGCCCTCATGGGTACTATTTCGC +
Preference number: 5 (lower is better)
Translates to: SFTVLSQEPEHTRWS*AASDHTQPSWVLFR
Trigger: GCGAAATAGTACCCATGAGGGCTGGGTGTGGTCACTGGCAGCGCAGGACCACCGCGTGTGCTCCGGCTCCTGGGACAGCACAGTGAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS GCA 90 bp AAGTATTCGACCCAGCGCCCATCCTCTGCCCAGCGGGACAGGTGCTaGTCCAGCGCAATGCAGGCTGCCGGCCAGTCAAAGTTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: KYSTQRPSSAQRDRC*SSAMQAAGQSKFLR
Trigger: CCGCAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGGGTCGAATACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS-3UTR CAA 90 bp GAAGCAGCCGTTGCGGTTGGCGAAGACGTGCAGCAGGCCCTGGTTGTCACCAGCTCCCACAAGTTGACGTaGCGATCTCGGGAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: EAAVAVGEDVQQALVVTSSHKLT*RSREPD
Trigger: GTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGA...GCTGGTGACAACCAGGGCCTGCTGCACGTCTTCGCCAACCGCAACGGCTGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CAA 90 bp AGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAAGAGTGGGAAGCGGCCCGCTGCAGGACGCTGTaGGCTCGGCGGTCCACCACC +
Preference number: 5 (lower is better)
Translates to: RAGHPNHNKTRAQEWEAARCRTL*ARRSTT
Trigger: GGTGGTGGACCGCCGAGCCAACAGCGTCCTGCAGCG...GGCCGCTTCCCACTCTTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp CCCCAAGAACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGAGCTGGAAGCAGCCGTaGCGGTTGGCGAAGACGTGC +
Preference number: 5 (lower is better)
Translates to: PQEQRRKPSLRQAVSTSTSWKQP*RLAKTC
Trigger: GCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGCT...CGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGTTCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp GCAGGCCCTGGTTGTCACCAGCCCAGAGCTGGGGTTCCTGGTAGGACATGCAGAAGCTGGAAGCAGCCGTaGCGGTTGGCGAAGACGTGC +
Preference number: 5 (lower is better)
Translates to: AGPGCHQPRAGVPGRTCRSWKQP*RLAKTC
Trigger: GCACGTCTTCGCCAACCGCAACGGCTGCTTCCAGCT...TCTGCATGTCCTACCAGGAACCCCAGCTCTGGGCTGGTGACAACCAGGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS GCA 90 bp CAGAAGTATTCGACCCAGCGCCCATCCTCTGCCCAGCGGGACAGGTaGTGCTCCAGCGCAATGCAGGCTGCCGGCCAGTCAAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QKYSTQRPSSAQRDR*CSSAMQAAGQSKFF
Trigger: GAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGGGTCGAATACTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS GCA 90 bp CAGAAGTATTCGACCCAGCGCCCATCCTCTGCCCAGCGGGACAGGTaGTGCTCCAGCGCAATGCAGGCTGCCGGCCAGTCAAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: QKYSTQRPSSAQRDR*CSSAMQAAGQSKFL
Trigger: CAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGGGTCGAATACTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS CCA 90 bp AGTGACCCACCCTGGAGCAGCAGCACTGAGTCAACGGAAGCCACGTaGCCTTCGGCCAGGCAGAAGTATTCGACCCAGCGCCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SDPPWSSSTESTEAT*PSARQKYSTQRPSS
Trigger: AGAGGATGGGCGCTGGGTCGAATACTTCTGCCTGGCCGAAGGCCACGTGGCTTCCGTTGACTCAGTGCTGCTGCTCCAGGGTGGGTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS-3UTR CAA 90 bp TGTCCAAAGATGGCCGCCGATCTGCTGAAGTTCTGCACGGAGCAGGCCAAGAATCGCTGCAGGACGCTGTaGGCTCGGCGGTCCACCACC +
Preference number: 5 (lower is better)
Translates to: CPKMAADLLKFCTEQAKNRCRTL*ARRSTT
Trigger: GGTGGTGGACCGCCGAGCCAACAGCGTCCTGCAGCG...ATTCTTGGCCTGCTCCGTGCAGAACTTCAGCAGATCGGCGGCCATCTTTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CAA 90 bp CAGGGCTGGGCCGGCTCTGGGGTCGTAGATGGTCACCTTCTTGTCATAGGTGCCCCATCAACAGTGACATaGGGCAGGCCCTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QGWAGSGVVDGHLLVIGAPSTVT*GRPSGQ
Trigger: CTGCCCAGAGGGCCTGCCCAATGTCACTGTTGATGG...GGCACCTATGACAAGAAGGTGACCATCTACGACCCCAGAGCCGGCCCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS GCA 90 bp AAGTATTCGACCCAGCGCCCATCCTCTGCCCAGCGGGACAGGTGCTaGTCCAGCGCAATGCAGGCTGCCGGCCAGTCAAAGTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: KYSTQRPSSAQRDRC*SSAMQAAGQSKFFS
Trigger: AGAGAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGGGTCGAATACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS GCA 90 bp GTGCCTAAGGTCTTGATCAGAACCTGGTTGGACTCCGTCCCCAGCTaGCGCAGGTCCCACAAGTTGACGTTGCGATCTCGGGAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: VPKVLIRTWLDSVPS*RRSHKLTLRSREPD
Trigger: GTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGACCTTAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS-3UTR CAA 90 bp TGTGGTGTACAAGGCTCCCACGGAGTACTGGATCCCAGTGATGGGAAAGCTGTGCTAGGGGAAGCTCCATaGCGACCGGGTGGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: CGVQGSHGVLDPSDGKAVLGEAP*RPGGRC
Trigger: GCAGCGCCCACCCGGTCGCAATGGAGCTTCCCCTAG...CACAGCTTTCCCATCACTGGGATCCAGTACTCCGTGGGAGCCTTGTACACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CAA 90 bp ACAGAGGAGGAAGCCCAGCCTCCGGCAGGCAGTATCCACATCCACGCCCACCTGACCCTATTGAGCCCATaGTCATGCCTTCGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: TEEEAQPPAGSIHIHAHLTLLSP*SCLRVQ
Trigger: TTGCACCCGAAGGCATGACAATGGGCTCAATAGGGT...CAGGTGGGCGTGGATGTGGATACTGCCTGCCGGAGGCTGGGCTTCCTCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp CGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAAGAGTGTGGCTGGGACTCCTaGTGCCCTAGGCCCACGGGG +
Preference number: 5 (lower is better)
Translates to: RSQLRAGHPNHNKTRAQECGWDS*CPRPTG
Trigger: CCCCGTGGGCCTAGGGCACAAGGAGTCCCAGCCACA...CTCTTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp GCAGGCCCTGGTTGTCACCAGCCCAGAGCTGGGGTTCCTGGTAGGACATGCAGAGTCTGGCTGAACCAGTaGGTCTGCAGGTGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: AGPGCHQPRAGVPGRTCRVWLNQ*VCRCPK
Trigger: CTTTGGACACCTGCAGACCAACTGGTTCAGCCAGAC...TCTGCATGTCCTACCAGGAACCCCAGCTCTGGGCTGGTGACAACCAGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CAA 90 bp CTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAACTAGGGGAAGCTCCATaGCGACCGGGTGGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LRSQLRAGHPNHNKTRAQLGEAP*RPGGRC
Trigger: GCAGCGCCCACCCGGTCGCAATGGAGCTTCCCCTAG...TTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp CCGGCCACCACCAGGTTGCCCTCAGCACAGACCCTATTGAGCCCATTGTCATGCTGCACCCGGATGGTCTaGTCAGTGGATGTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: PATTRLPSAQTLLSPLSCCTRMV*SVDVVY
Trigger: GTACACCACATCCACTGACAAGACCATCCGGGTGCA...GCATGACAATGGGCTCAATAGGGTCTGTGCTGAGGGCAACCTGGTGGTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CAA 90 bp GGCGGAGGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCACCCTATTGAGCCCATaGTCATGCCTTCGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: GGGSTNIGDGPPRTEEEATLLSP*SCLRVQ
Trigger: TTGCACCCGAAGGCATGACAATGGGCTCAATAGGGT...GGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp GCATGCCTGGGTCTGGTCTGGCTGAACCAGTTGGTCTGCAGGTGTCCAAAGATGTTGATCAGAACCTGGTaGGACTCCGTCCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ACLGLVWLNQLVCRCPKMLIRTW*DSVPSC
Trigger: GCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAA...CATCTTTGGACACCTGCAGACCAACTGGTTCAGCCAGACCAGACCCAGGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS-3UTR CAA 90 bp CGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAAGAGCGCAGGTCCCACAAGTaGACGTTGCGATCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: RSQLRAGHPNHNKTRAQERRSHK*TLRSRE
Trigger: CTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCG...CTCTTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp GGCAGCACCAACATTGGGGATGGTCCCCCAAGAACAGAGGAGGAAGCCCAGCCTTTAGTGCCTAAGGTCTaGATCAGAACCTGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: GSTNIGDGPPRTEEEAQPLVPKV*IRTWLD
Trigger: GTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAA...AGGCTGGGCTTCCTCCTCTGTTCTTGGGGGACCATCCCCAATGTTGGTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS-3UTR CAA 90 bp GTGTACAAGGCTCCCACGGAGTACTGGATCCCAGTGATGGGAAAGCTGTGGCCCTCAGCACAGACCCTATaGAGCCCATTGTCATGCCTT +
Preference number: 5 (lower is better)
Translates to: VYKAPTEYWIPVMGKLWPSAQTL*SPLSCL
Trigger: AAGGCATGACAATGGGCTCAATAGGGTCTGTGCTGA...GGGCCACAGCTTTCCCATCACTGGGATCCAGTACTCCGTGGGAGCCTTGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS CCA 90 bp TCATGGGTACTATTTCGCTTAGTGCCTAAGGTCTTGATCAGAACCTaGTTGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAGTTGACG +
Preference number: 5 (lower is better)
Translates to: SWVLFRLVPKVLIRT*LDSVPSCRRSHKLT
Trigger: CGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAAGCGAAATAGTACCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS-3UTR CAA 90 bp CTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACAAAACCAGGGCCCAAGAGGCAGCACCAACATaGGGGATGGTCCCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: LRSQLRAGHPNHNKTRAQEAAPT*GMVPQE
Trigger: TTCTTGGGGGACCATCCCCAATGTTGGTGCTGCCTC...TTGGGCCCTGGTTTTGTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp TCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATCATAACTGCACCCGGATGGTCTaGTCAGTGGATGTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SGLFLLRSQLRAGHPNHNCTRMV*SVDVVY
Trigger: GTACACCACATCCACTGACAAGACCATCCGGGTGCA...GTTATGATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp AAGCACCAACATGTCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATTAGTGCCTAAGGTCTaGATCAGAACCTGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: KHQHVRFISPSLSTESGALVPKV*IRTWLD
Trigger: GTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAA...TGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGACATGTTGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS-3UTR CAA 90 bp AACATGTCAGGTTTATTTCTCCTTCGCTCTCAACTGAGAGCGGGGCATCCAAATTCAGCACAGACCCTATaGAGCCCATTGTCATGCCTT +
Preference number: 5 (lower is better)
Translates to: NMSGLFLLRSQLRAGHPNSAQTL*SPLSCL
Trigger: AAGGCATGACAATGGGCTCAATAGGGTCTGTGCTGA...ATTTGGATGCCCCGCTCTCAGTTGAGAGCGAAGGAGAAATAAACCTGACATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS CCA 72 bp CCCGAGGCTCCGAAGCGCTCGGGGACGCGGCGGGTGTaGATAGCTGCGAGGGGCGCGAGAACGCCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: PEAPKRSGTRRV*IAARGARTPAR
Trigger: CCGGGCTGGCGTTCTCGCGCCCCTCGCAGCTATCCACACCCGCCGCGTCCCCGAGCGCTTCGGAGCCTCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS TCA 72 bp GCGCGCGTACGCGGCGTAGCGCGCGTAGCCTCCAGGTaGCATGGTCAGACACGAGGTCGCGGAGCGCGTGGC +
Preference number: 6 (lower is better)
Translates to: ARVRGVARVASR*HGQTRGRGARG
Trigger: GCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCTACGCGCGCTACGCCGCGTACGCGCGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS CCA 72 bp GGCTCAGAAGGCCCGGCTCACTTACGGCCGAAACCCTaGACGCGGCCCGAGGCTCCGAAGCGCTCGGGGACG +
Preference number: 6 (lower is better)
Translates to: GSEGPAHLRPKP*TRPEAPKRSGT
Trigger: CGTCCCCGAGCGCTTCGGAGCCTCGGGCCGCGTCCAGGGTTTCGGCCGTAAGTGAGCCGGGCCTTCTGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS CAA 90 bp CGTCCCAGGTGCGGGAATCATCGCACCGCCCTAGGGGAAGCTCCATaGCGACCGGGTGGGCGCTGCCGGCCTCGCGTCTTGTCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: RPRCGNHRTALGEAP*RPGGRCRPRVLSPR
Trigger: CCTAGGAGACAAGACGCGAGGCCGGCAGCGCCCACCCGGTCGCAATGGAGCTTCCCCTAGGGCGGTGCGATGATTCCCGCACCTGGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS TCA 72 bp AGGGGCGCGAGAACGCCAGCCCGGATTTTGGCGGACTaGGAACGCGGGCCACGTAGGCCTTGGCCTGCGCGT +
Preference number: 6 (lower is better)
Translates to: RGARTPARILAD*ERGPRRPWPAR
Trigger: ACGCGCAGGCCAAGGCCTACGTGGCCCGCGTTCTCAGTCCGCCAAAATCCGGGCTGGCGTTCTCGCGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS GCA 72 bp TCGACCCAGCGCCCATCCTCTGCCCAGCGGGACAGGTaGTGCTCCAGCGCAATGCAGGCTGCCGGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: STQRPSSAQRDR*CSSAMQAAGQS
Trigger: TGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGGGTCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS CCA 72 bp CAGGTGACATGGTCAGACACGAGGTCGCGGAGCGCGTaGCACACCCGCGACAGGACGTGGAGCACGAGGCGG +
Preference number: 6 (lower is better)
Translates to: QVTWSDTRSRSA*HTRDRTWSTRR
Trigger: CCGCCTCGTGCTCCACGTCCTGTCGCGGGTGTGCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS CCA 72 bp CGTACGCGGCGTAGCGCGCGTAGCCTCCAGGTGACATaGTCAGACACGAGGTCGCGGAGCGCGTGGCACACC +
Preference number: 6 (lower is better)
Translates to: RTRRSARSLQVT*SDTRSRSAWHT
Trigger: GGTGTGCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCTACGCGCGCTACGCCGCGTACG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS CAA 72 bp TGCGGGAATCATCGCACCGCCCTAGGGGAAGCTCCATaGCGACCGGGTGGGCGCTGCCGGCCTCGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: CGNHRTALGEAP*RPGGRCRPRVL
Trigger: CAAGACGCGAGGCCGGCAGCGCCCACCCGGTCGCAATGGAGCTTCCCCTAGGGCGGTGCGATGATTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587296.1
CDS GCA 72 bp ACCCAGCGCCCATCCTCTGCCCAGCGGGACAGGTGCTaGTCCAGCGCAATGCAGGCTGCCGGCCAGTCAAAG +
Preference number: 6 (lower is better)
Translates to: TQRPSSAQRDRC*SSAMQAAGQSK
Trigger: CTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS CCA 72 bp TTCACTGTGCTGTCCCAGGAGCCGGAGCACACGCGGTaGTCCTGCGCTGCCAGTGACCACACCCAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: FTVLSQEPEHTR*SCAASDHTQPS
Trigger: TGAGGGCTGGGTGTGGTCACTGGCAGCGCAGGACCACCGCGTGTGCTCCGGCTCCTGGGACAGCACAGTGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS CCA 72 bp TTCTTGCGGCGTAGCGCGCGTAGCCTCCAGGTGACATaGTCAGACACGAGGTCGCGGAGCGCGTGGCACACC +
Preference number: 6 (lower is better)
Translates to: FLRRSARSLQVT*SDTRSRSAWHT
Trigger: GGTGTGCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCTACGCGCGCTACGCCGCAAGAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS TCA 72 bp CAAAGTTCTTGCGGCGTAGCGCGCGTAGCCTCCAGGTaGCATGGTCAGACACGAGGTCGCGGAGCGCGTGGC +
Preference number: 6 (lower is better)
Translates to: QSSCGVARVASR*HGQTRGRGARG
Trigger: GCCACGCGCTCCGCGACCTCGTGTCTGACCATGTCACCTGGAGGCTACGCGCGCTACGCCGCAAGAACTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS TCA 72 bp GCTGGTGCTTCAACAGGGCTGGGCCGGCTTCATGGGTaGTGGGCCGGTGAGGAGGGATATCAGAGCCCCTCG +
Preference number: 6 (lower is better)
Translates to: AGASTGLGRLHG*WAGEEGYQSPS
Trigger: CGAGGGGCTCTGATATCCCTCCTCACCGGCCCATCACCCATGAAGCCGGCCCAGCCCTGTTGAAGCACCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS GCA 72 bp GGCCAGGCAGAAGTATTCGACCCAGCGCCCATCCTCTaGCCAGCGGGACAGGTGCTGCTCCAGCGCAATGCA +
Preference number: 6 (lower is better)
Translates to: GQAEVFDPAPIL*PAGQVLLQRNA
Trigger: TGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGGATGGGCGCTGGGTCGAATACTTCTGCCTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS GCA 72 bp CCTCTGCCCAGCGGGACAGGTGCTGCTCCAGCGCAATaGAGGCTGCCGGCCAGTCAAAGTTCTTGCGGCGTA +
Preference number: 6 (lower is better)
Translates to: PLPSGTGAAPAQ*RLPASQSSCGV
Trigger: TACGCCGCAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS CAA 90 bp TGGTTGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAGTTGACGTaGCGATCTCGGGAGCCCGACAGACAGAGTGACCCACCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: WLDSVPSCRRSHKLT*RSREPDRQSDPPWS
Trigger: GCTCCAGGGTGGGTCACTCTGTCTGTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS TCA 72 bp TGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAGTTaGCGTTGCGATCTCGGGAGCCCGACAGACAGAGTG +
Preference number: 6 (lower is better)
Translates to: WTPSPAAAGPTS*RCDLGSPTDRV
Trigger: CACTCTGTCTGTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS TCA 72 bp GGAGCCGGAGCACACGCGGTGGTCCTGCGCTGCCAGTaGCCACACCCAGCCCTCATGGGTACTATTTCGCTT +
Preference number: 6 (lower is better)
Translates to: GAGAHAVVLRCQ*PHPALMGTISL
Trigger: AAGCGAAATAGTACCCATGAGGGCTGGGTGTGGTCACTGGCAGCGCAGGACCACCGCGTGTGCTCCGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS GCA 72 bp TCCGCCAGCAGGGTCAGCACGGGTCTGGAGTGTAGTTaGTGGTGCTTCAACAGGGCTGGGCCGGCTTCATGG +
Preference number: 6 (lower is better)
Translates to: SASRVSTGLECS*WCFNRAGPASW
Trigger: CCATGAAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGACCCGTGCTGACCCTGCTGGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS CCA 72 bp CCCTGGAGCAGCAGCACTGAGTCAACGGAAGCCACGTaGCCTTCGGCCAGGCAGAAGTATTCGACCCAGCGC +
Preference number: 6 (lower is better)
Translates to: PWSSSTESTEAT*PSARQKYSTQR
Trigger: GCGCTGGGTCGAATACTTCTGCCTGGCCGAAGGCCACGTGGCTTCCGTTGACTCAGTGCTGCTGCTCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS CCA 72 bp GCCAGCAGGGTCAGCACGGGTCTGGAGTGTAGTTGCTaGTGCTTCAACAGGGCTGGGCCGGCTTCATGGGTG +
Preference number: 6 (lower is better)
Translates to: ASRVSTGLECSC*CFNRAGPASWV
Trigger: CACCCATGAAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGACCCGTGCTGACCCTGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS CAA 72 bp TCCGTCCCCAGCTGCCGCAGGTCCCACAAGTTGACGTaGCGATCTCGGGAGCCCGACAGACAGAGTGACCCA +
Preference number: 6 (lower is better)
Translates to: SVPSCRRSHKLT*RSREPDRQSDP
Trigger: TGGGTCACTCTGTCTGTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS CAA 90 bp AGAACCTGGTTGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAGTaGACGTTGCGATCTCGGGAGCCCGACAGACAGAGTGACCCACCC +
Preference number: 6 (lower is better)
Translates to: RTWLDSVPSCRRSHK*TLRSREPDRQSDPP
Trigger: GGGTGGGTCACTCTGTCTGTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS CAA 90 bp TGGTTGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAGTTGACGTaGCGATCTCGGGAGCCCGACAGACAGAGTGACCCACCCTTCCAC +
Preference number: 6 (lower is better)
Translates to: WLDSVPSCRRSHKLT*RSREPDRQSDPPFH
Trigger: GTGGAAGGGTGGGTCACTCTGTCTGTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS GCA 72 bp CTGTCTCTGACTCTGGGTCCGAGTCATCGTCCCAGGTaGGGGAATCATCGCACCGCCCTAGGGGAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: LSLTLGPSHRPR*GNHRTALGEAP
Trigger: TGGAGCTTCCCCTAGGGCGGTGCGATGATTCCCGCACCTGGGACGATGACTCGGACCCAGAGTCAGAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS GCA 72 bp CCAGCGGGACAGGTGCTGCTCCAGCGCAATGCAGGCTaGCGGCCAGTCAAAGTTCTTCTCTTCCACCACTGG +
Preference number: 6 (lower is better)
Translates to: PAGQVLLQRNAG*RPVKVLLFHHW
Trigger: CCAGTGGTGGAAGAGAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS GCA 72 bp CCTCTGCCCAGCGGGACAGGTGCTGCTCCAGCGCAATaGAGGCTGCCGGCCAGTCAAAGTTCTTCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: PLPSGTGAAPAQ*RLPASQSSSLP
Trigger: TGGAAGAGAAGAACTTTGACTGGCCGGCAGCCTGCATTGCGCTGGAGCAGCACCTGTCCCGCTGGGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393261.8
CDS CAA 72 bp TTGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAGTaGACGTTGCGATCTCGGGAGCCCGACAGACAGAGT +
Preference number: 6 (lower is better)
Translates to: LDSVPSCRRSHK*TLRSREPDRQS
Trigger: ACTCTGTCTGTCGGGCTCCCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS GCA 72 bp AGCACGGCTGAGCTGGCCTTTATCTCGCCGAACTGCTaGCCATCCGCTGCCATGTCCCAGAGCTTCACTGTG +
Preference number: 6 (lower is better)
Translates to: STAELAFISPNC*PSAAMSQSFTV
Trigger: CACAGTGAAGCTCTGGGACATGGCAGCGGATGGGCAGCAGTTCGGCGAGATAAAGGCCAGCTCAGCCGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS GCA 72 bp CACAGCACGGCTGAGCTGGCCTTTATCTCGCCGAACTaGTGCCCATCCGCTGCCATGTCCCAGAGCTTCACT +
Preference number: 6 (lower is better)
Translates to: HSTAELAFISPN*CPSAAMSQSFT
Trigger: AGTGAAGCTCTGGGACATGGCAGCGGATGGGCAGCAGTTCGGCGAGATAAAGGCCAGCTCAGCCGTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS GCA 72 bp AGCAGGGTCAGCACGGGTCTGGAGTGTAGTTGCTGGTaGTTCAACAGGGCTGGGCCGGCTTCATGGGTGATG +
Preference number: 6 (lower is better)
Translates to: SRVSTGLECSCW*FNRAGPASWVM
Trigger: CATCACCCATGAAGCCGGCCCAGCCCTGTTGAAGCACCAGCAACTACACTCCAGACCCGTGCTGACCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS GCA 72 bp GTCTTGATCAGAACCTGGTTGGACTCCGTCCCCAGCTaGCGCAGGTCCCACAAGTTGACGTTGCGATCTCGG +
Preference number: 6 (lower is better)
Translates to: VLIRTWLDSVPS*RRSHKLTLRSR
Trigger: CCGAGATCGCAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS CAA 90 bp CACACCCAGCCCTCATGGGTACTATTTCGCTTAGTGCCTAAGGTCTaGATCAGAACCTGGTTGGACTCCGTCCCCAGCTGCCGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: HTQPSWVLFRLVPKV*IRTWLDSVPSCRRS
Trigger: GGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAAGCGAAATAGTACCCATGAGGGCTGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393261.8
ENST00000587955.1
CDS CAA 90 bp CTGAGCTGGCCCTCATGGGTACTATTTCGCTTAGTGCCTAAGGTCTaGATCAGAACCTGGTTGGACTCCGTCCCCAGCTGCCGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: LSWPSWVLFRLVPKV*IRTWLDSVPSCRRS
Trigger: GGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAAGCGAAATAGTACCCATGAGGGCCAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587296.1
CDS CCA 72 bp CTATTTCGCTTAGTGCCTAAGGTCTTGATCAGAACCTaGTTGGACTCCGTCCCCAGCTGCCGCAGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: LFRLVPKVLIRT*LDSVPSCRRSH
Trigger: GTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAAGCGAAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS CCA 72 bp CATCCCGGGTCTCCATCCTGTCTCTGGGGTCGTAGATaGTCACCTTCTTGTCATAGGTGCCAGTCACCAGGA +
Preference number: 6 (lower is better)
Translates to: HPGSPSCLWGRR*SPSCHRCQSPG
Trigger: TCCTGGTGACTGGCACCTATGACAAGAAGGTGACCATCTACGACCCCAGAGACAGGATGGAGACCCGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587955.1
CDS CAA 72 bp TTTCGCTTAGTGCCTAAGGTCTTGATCAGAACCTGGTaGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAG +
Preference number: 6 (lower is better)
Translates to: FRLVPKVLIRTW*DSVPSCRRSHK
Trigger: CTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAAGCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS CAA 90 bp TGGGTACTATTTCGCTTAGTGCCTAAGGTCTTGATCAGAACCTGGTaGGACTCCGTCCCCAGCTGCCGCAGGTCCCACAAGTTGACGTTG +
Preference number: 6 (lower is better)
Translates to: WVLFRLVPKVLIRTW*DSVPSCRRSHKLTL
Trigger: CAACGTCAACTTGTGGGACCTGCGGCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAAGCGAAATAGTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1
CDS CAA 72 bp CCCTCATGGGTACTATTTCGCTTAGTGCCTAAGGTCTaGATCAGAACCTGGTTGGACTCCGTCCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: PSWVLFRLVPKV*IRTWLDSVPSC
Trigger: GCAGCTGGGGACGGAGTCCAACCAGGTTCTGATCAAGACCTTAGGCACTAAGCGAAATAGTACCCATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393261.8
ENST00000587296.1
ENST00000587955.1