RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXW7 (Homo sapiens)

Ensembl gene IDs: ENSG00000109670

Ensembl transcript IDs: ENST00000281708.10, ENST00000296555.11, ENST00000393956.9, ENST00000603548.6, ENST00000603821.1, ENST00000603841.1, ENST00000604069.1, ENST00000604095.1, ENST00000604316.1, ENST00000604822.1, ENST00000604872.6, ENST00000605042.1, ENST00000642901.1, ENST00000643834.1, ENST00000647166.1, ENST00000647183.1

Found 665 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAATCCATCTCAGGACTCACAGAACCCAGGACAACTTGCCACCTTTaGGCAACATATGCATTGAAGAATGTATATGGAAGCAACAGTAAA +
Preference number: 1 (lower is better)
Translates to: KSISGLTEPRTTCHL*ATYALKNVYGSNSK
Trigger: TTTACTGTTGCTTCCATATACATTCTTCAATGCATATGTTGCTCAAAGGTGGCAAGTTGTCCTGGGTTCTGTGAGTCCTGAGATGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR TCA 90 bp GCAGTTGCAGCACATTATCCTTACTTTCGCGGTATAAAACAGGCTTaGAGTATTGATTTCTATGTCACACAGCAGGATGCAAAGAAACCA +
Preference number: 1 (lower is better)
Translates to: AVAAHYPYFRGIKQA*SIDFYVTQQDAKKP
Trigger: TGGTTTCTTTGCATCCTGCTGTGTGACATAGAAATCAATACTTCAAGCCTGTTTTATACCGCGAAAGTAAGGATAATGTGCTGCAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR TCA 90 bp TCACAGAACCCAGGACAACTTGCCACCTTTGAGCAACATATGCATTaGAGAATGTATATGGAAGCAACAGTAAATAGATTAACAGAGGCT +
Preference number: 1 (lower is better)
Translates to: SQNPGQLATFEQHMH*RMYMEATVNRLTEA
Trigger: AGCCTCTGTTAATCTATTTACTGTTGCTTCCATATACATTCTTCAATGCATATGTTGCTCAAAGGTGGCAAGTTGTCCTGGGTTCTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCCCAAGCCAACATCCTaGACCACTGAGAACAAGGGA +
Preference number: 2 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVPKPTS*TTENKG
Trigger: TCCCTTGTTCTCAGTGGTGCAGGATGTTGGCTTGGG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCGTGGCTCTTGGAGAATaGGGCAAACCATTTGACTGT +
Preference number: 2 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAVALGE*GKPFDC
Trigger: ACAGTCAAATGGTTTGCCTCATTCTCCAAGAGCCAC...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTGTCTTTTCAATCTGTTaGCCCAAGCCAACATCCTGC +
Preference number: 2 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVVFSIC*PKPTSC
Trigger: GCAGGATGTTGGCTTGGGGCAACAGATTGAAAAGAC...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCGCCCTCAGTCAAAAGTaGAGCCTTTTATGTGATGAG +
Preference number: 2 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAALSQK*SLLCDE
Trigger: CTCATCACATAAAAGGCTTCACTTTTGACTGAGGGC...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTTTCACAGTTCAGCTTaGGTTGTGGCTCTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAFHSSA*VVALGE
Trigger: TTCTCCAAGAGCCACAACTCAAGCTGAACTGTGAAA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTTGAGTTGTGGCTCTTaGAGAATGAGGCAAACCATT +
Preference number: 2 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALSCGS*RMRQTI
Trigger: AATGGTTTGCCTCATTCTCCAAGAGCCACAACTCAA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCAGAGGCTAATACTGTaGTTGATTGACATTGGCAAT +
Preference number: 2 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAQRLIL*LIDIGN
Trigger: ATTGCCAATGTCAATCAATCACAGTATTAGCCTCTG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCAGTACAGTACAGGGTTaGGACAACAATCCCATATTT +
Preference number: 2 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSASTVQG*DNNPIF
Trigger: AAATATGGGATTGTTGTCCCAACCCTGTACTGTACT...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGCCCTCAGTCAAAAGTaGAGCCTTTTATGTGATGAG +
Preference number: 2 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQALSQK*SLLCDE
Trigger: CTCATCACATAAAAGGCTTCACTTTTGACTGAGGGC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGCAGAGGCTAATACTGTaGTTGATTGACATTGGCAAT +
Preference number: 2 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQQRLIL*LIDIGN
Trigger: ATTGCCAATGTCAATCAATCACAGTATTAGCCTCTG...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTCACTCTTTATTATCTaGAACTCTTCCATTCTCAGC +
Preference number: 2 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQSLFII*NSSILS
Trigger: GCTGAGAATGGAAGAGTTTCAGATAATAAAGAGTGA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCTCATTTTGCAAAGCTaGCCTCAGTCAAAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQLILQS*PQSKVK
Trigger: CTTCACTTTTGACTGAGGGCAGCTTTGCAAAATGAG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGCTCTCTTGTCAGTTATaGTTTGTCATCTCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQLSCQL*FVISSS
Trigger: AGAAGAAGAGATGACAAACCATAACTGACAAGAGAG...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCAACAATCCCATATTTaGAGACCTACTTCTAGCACC +
Preference number: 2 (lower is better)
Translates to: LNKTATEQSESTRKMAYFQQSHI*RPTSST
Trigger: GGTGCTAGAAGTAGGTCTTCAAATATGGGATTGTTG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGAGCTTAAGAGAGAATaGACAGAAAGTATCGAGGGT +
Preference number: 2 (lower is better)
Translates to: LNKTATEQSESTRKMAYFELKRE*TESIEG
Trigger: ACCCTCGATACTTTCTGTTCATTCTCTCTTAAGCTC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGTATGATTTGACAAATTaGCTAACCAGTCTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQYDLTN*LTSLSC
Trigger: GCAGCTGAGACTGGTTAGGCAATTTGTCAAATCATA...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGTTGTTTGTTTGCATGTaGCGCCTTTACTACAAAAAC +
Preference number: 2 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQLFVCM*RLYYKN
Trigger: GTTTTTGTAGTAAAGGCGTCACATGCAAACAAACAA...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCTCTCTTGTCAGTTATaGTTTGTCATCTCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQLSCQL*FVISSS
Trigger: AGAAGAAGAGATGACAAACCATAACTGACAAGAGAG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTCACTCTTTATTATCTaGAACTCTTCCATTCTCAGC +
Preference number: 2 (lower is better)
Translates to: LNKTATEQSESTRKMAYFSLFII*NSSILS
Trigger: GCTGAGAATGGAAGAGTTTCAGATAATAAAGAGTGA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR GCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCAAACTGAATAGTTTCTaGTTTGTCAGTTACTCAGAG +
Preference number: 2 (lower is better)
Translates to: LNKTATEQSESTRKMAYFKLNSF*FVSYSE
Trigger: CTCTGAGTAACTGACAAAGCAGAAACTATTCAGTTT...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCTTGAGTTGTGGCTCTaGGAGAATGAGGCAAACCAT +
Preference number: 3 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALELWL*ENEANH
Trigger: ATGGTTTGCCTCATTCTCCAAGAGCCACAACTCAAG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGCAGCAGACGCCTCTCTaGTCAGTTATGGTTTGTCAT +
Preference number: 3 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQQQTPL*SVMVCH
Trigger: ATGACAAACCATAACTGACAAGAGAGGCGTCTGCTG...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTTAGAAAGTCTCATTTaGCAAAGCTGCCCTCAGTCA +
Preference number: 3 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALESLI*QSCPQS
Trigger: TGACTGAGGGCAGCTTTGCAAAATGAGACTTTCTAA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGGAGTACAGTACAGGGTaGGGACAACAATCCCATATT +
Preference number: 3 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQEYSTG*GQQSHI
Trigger: AATATGGGATTGTTGTCCCAACCCTGTACTGTACTC...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATGAGTACAGTACAGGGTaGGGACAACAATCCCATATT +
Preference number: 3 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNEYSTG*GQQSHI
Trigger: AATATGGGATTGTTGTCCCAACCCTGTACTGTACTC...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCAGCAGACGCCTCTCTaGTCAGTTATGGTTTGTCAT +
Preference number: 3 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQQQTPL*SVMVCH
Trigger: ATGACAAACCATAACTGACAAGAGAGGCGTCTGCTG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATGACAACTTGCCACCTTaGAGCAACATATGCATTGAA +
Preference number: 3 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNDNLPP*SNICIE
Trigger: TTCAATGCATATGTTGCTCAAAGGTGGCAAGTTGTC...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGACAGTTCAGCTTGAGTaGTGGCTCTTGGAGAATGAG +
Preference number: 3 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQTVQLE*WLLENE
Trigger: CTCATTCTCCAAGAGCCACAACTCAAGCTGAACTGT...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR CCA 72 bp TTTCTTTCATTTAGCAGCATAAATAAGTTTGGCCACTaGGAGTACAGTACAGGGTTGGGACAACAATCCCAT +
Preference number: 3 (lower is better)
Translates to: FLSFSSINKFGH*EYSTGLGQQSH
Trigger: ATGGGATTGTTGTCCCAACCCTGTACTGTACTCCCAGTGGCCAAACTTATTTATGCTGCTAAATGAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCTTGTCAGTTATGGTTaGTCATCTCTTCTTCTTTTC +
Preference number: 3 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALVSYG*SSLLLF
Trigger: GAAAAGAAGAAGAGATGACAAACCATAACTGACAAG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGTTTGGAAATATGGGTTaGAGTTCTGGCATTCCGCTA +
Preference number: 3 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQFGNMG*SSGIPL
Trigger: TAGCGGAATGCCAGAACTCAAACCCATATTTCCAAA...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCAAACTAGAGCAAATTaGGAATTCAGTCTGGGACTA +
Preference number: 3 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQQTRAN*EFSLGL
Trigger: TAGTCCCAGACTGAATTCCAAATTTGCTCTAGTTTG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR GCA 72 bp TTCTATGATTTGACAAATTGCCTAACCAGTCTCAGCTaGAGATTTTTGCTCGTCTTTAAGATGGGAGATAAT +
Preference number: 3 (lower is better)
Translates to: FYDLTNCLTSLS*RFLLVFKMGDN
Trigger: ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCAATTTGTCAAATCATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCTTGTCAGTTATGGTTaGTCATCTCTTCTTCTTTTC +
Preference number: 3 (lower is better)
Translates to: LNKTATEQSESTRKMAYFLVSYG*SSLLLF
Trigger: GAAAAGAAGAAGAGATGACAAACCATAACTGACAAG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCACTCCGGGGCAAGATaGTACGGCCCCGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFHSGAR*YGPGRV
Trigger: CACCCGCCCGGGGCCGTAGCATCTTGCCCCGGAGTG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTCCCGCTGGCCCAGGTaGGAGCGAAGGTCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVSRWPR*ERRSRR
Trigger: CCGCCGAGACCTTCGCTCTCACCTGGGCCAGCGGGA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCACTCCGGGGCAAGATaGTACGGCCCCGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFHSGAR*YGPGRV
Trigger: CACCCGCCCGGGGCCGTAGCATCTTGCCCCGGAGTG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTCCCGCTGGCCCAGGTaGGAGCGAAGGTCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSASRWPR*ERRSRR
Trigger: CCGCCGAGACCTTCGCTCTCACCTGGGCCAGCGGGA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCTCGGCGGCGGCCAGTaGAGGGGGACTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLGGGQ*RGTGSL
Trigger: GAGAGATCCAGTCCCCCTGCACTGGCCGCCGCCGAG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCGGCGGCGGCCAGTaGAGGGGGACTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLLGGGQ*RGTGSL
Trigger: GAGAGATCCAGTCCCCCTGCACTGGCCGCCGCCGAG...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCTTCCTCCTTCGGACTaGAGCGGCAGCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLPPSD*SGSCGR
Trigger: CCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGCTCCGGCGCGGTACTaGGGAAGAAGCGGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCAPARY*GRSGAR
Trigger: ACGAGCACCGCTTCTTCCTCAGTACCGCGCCGGAGC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTAAAGTTTCCTCTGGGTaGAGGCTGCGGCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSKVSSG*RLRPAP
Trigger: GGGGGCCGGCCGCAGCCTCCACCCAGAGGAAACTTT...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCTTCCTCCTTCGGACTaGAGCGGCAGCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLPPSD*SGSCGR
Trigger: CCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCAGGCTGCGGCTTCTaGCCGTCCAGGGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFSGCGF*PSRATS
Trigger: AGAAGTGGCCCTGGACGGGCAGAAGCCGCAGCCTGA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCCTTCAGTGATTCTGTaGCCCCGTGTGTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFPSVIL*PRVSGC
Trigger: GCAGCCGGACACACGGGGGCACAGAATCACTGAAGG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTCAGGCTGCGGCTTCTaGCCGTCCAGGGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQSGCGF*PSRATS
Trigger: AGAAGTGGCCCTGGACGGGCAGAAGCCGCAGCCTGA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTGGGTCTTTTCAGGCTaGGGCTTCTGCCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVWVFSG*GFCPSR
Trigger: CCTGGACGGGCAGAAGCCGCAGCCTGAAAAGACCCA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCCAGTGCAGGGGGACTaGATCTCTCGGATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFPVQGD*ISRMLL
Trigger: AAGGAGCATCCGAGAGATCCAGTCCCCCTGCACTGG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGTGGTTGCCGAGCTTaGTTGGGGCCCCGGTTCATA +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSGGCRA*LGPRFI
Trigger: TATGAACCGGGGCCCCAACCAAGCTCGGCAACCACC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTGCGGCGCCGAGAAAGTaGGTTGGTTCCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVAAPRK*VGSLPP
Trigger: AGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGC...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGTGTTTGAGGCTCTaGTCCGCCACACAACTCCCC +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLCLRL*SATQLP
Trigger: GGGGAGTTGTGTGGCGGATCAGAGCCTCAAACACAA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCACCAGCTTTGTGTTTaGGGCTCTGATCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFHQLCV*GSDPPH
Trigger: GTGTGGCGGATCAGAGCCTCAAACACAAAGCTGGTG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTGGGGAGGAGAGTTGGTaGACGGGCAGGTCCACAATA +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFGEESW*TGRSTI
Trigger: TATTGTGGACCTGCCCGTTCACCAACTCTCCTCCCC...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGGGAGGAGAGTTGGTaGACGGGCAGGTCCACAATA +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSGEESW*TGRSTI
Trigger: TATTGTGGACCTGCCCGTTCACCAACTCTCCTCCCC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTATTCGGCGTCGTTGTTaGCCTTGGCCATTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFIRRRC*PWPLAA
Trigger: AGCAGCCAATGGCCAAGGGCAACAACGACGCCGAAT...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGTCTCCCTCGCTCTGTaGGGGGCTCTCGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQVSLAL*GALASL
Trigger: GAGTGAGGCGAGAGCCCCGCACAGAGCGAGGGAGAC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281708.10
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTGGGTCTTTTCAGGCTaGGGCTTCTGCCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAWVFSG*GFCPSR
Trigger: CCTGGACGGGCAGAAGCCGCAGCCTGAAAAGACCCA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCCCGTGTGTCCGGCTaGTTGGCAGTCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLPRVSG*LAVSDN
Trigger: ATTGTCAGAGACTGCCAAGCAGCCGGACACACGGGG...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCGTCGTTGTTGCCCTTaGCCATTGGCTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSARRCCP*PLAALR
Trigger: CCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCGTCGTTGTTGCCCTTaGCCATTGGCTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCRRCCP*PLAALR
Trigger: CCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCGTCGTTGTTGCCCTTaGCCATTGGCTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFRRCCP*PLAALR
Trigger: CCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGTCGTTGTTGCCCTTaGCCATTGGCTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFRRCCP*PLAALR
Trigger: CCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCCAGTGCAGGGGGACTaGATCTCTCGGATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVPVQGD*ISRMLL
Trigger: AAGGAGCATCCGAGAGATCCAGTCCCCCTGCACTGG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGACGAGGCAGAAGCTCTaGCGCCTCCTCAGCGTTCTC +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQTRQKL*RLLSVL
Trigger: GAGAACGCTGAGGAGGCGCCAGAGCTTCTGCCTCGT...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATACGAGGCAGAAGCTCTaGCGCCTCCTCAGCGTTCTC +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNTRQKL*RLLSVL
Trigger: GAGAACGCTGAGGAGGCGCCAGAGCTTCTGCCTCGT...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGGGTGGTTGCCGAGCTTaGTTGGGGCCCCGGTTCATA +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQGGCRA*LGPRFI
Trigger: TATGAACCGGGGCCCCAACCAAGCTCGGCAACCACC...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGAAAGTTTCCTCTGGGTaGAGGCTGCGGCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQKVSSG*RLRPAP
Trigger: GGGGGCCGGCCGCAGCCTCCACCCAGAGGAAACTTT...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGCGGCGCCGAGAAAGTaGGTTGGTTCCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAAAPRK*VGSLPP
Trigger: AGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCTCCTGCCATCATATTaGACACAGCGGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLLPSY*TQRTAA
Trigger: TGCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCAGGTCACAGCACTCTaGTGCTTGTTGGGACCTTGC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFQVTAL*CLLGPC
Trigger: GCAAGGTCCCAACAAGCATCAGAGTGCTGTGACCTG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCAGGTCACAGCACTCTaGTGCTTGTTGGGACCTTGC +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSQVTAL*CLLGPC
Trigger: GCAAGGTCCCAACAAGCATCAGAGTGCTGTGACCTG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCAGGTCACAGCACTCTaGTGCTTGTTGGGACCTTGC +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVQVTAL*CLLGPC
Trigger: GCAAGGTCCCAACAAGCATCAGAGTGCTGTGACCTG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTTGTGTTTGAGGCTCTaGTCCGCCACACAACTCCCC +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVLCLRL*SATQLP
Trigger: GGGGAGTTGTGTGGCGGATCAGAGCCTCAAACACAA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTTGTGTTTGAGGCTCTaGTCCGCCACACAACTCCCC +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLCLRL*SATQLP
Trigger: GGGGAGTTGTGTGGCGGATCAGAGCCTCAAACACAA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTTGTGTTTGAGGCTCTaGTCCGCCACACAACTCCCC +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLCLRL*SATQLP
Trigger: GGGGAGTTGTGTGGCGGATCAGAGCCTCAAACACAA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCACCAGCTTTGTGTTTaGGGCTCTGATCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCHQLCV*GSDPPH
Trigger: GTGTGGCGGATCAGAGCCTCAAACACAAAGCTGGTG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCACCAGCTTTGTGTTTaGGGCTCTGATCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVHQLCV*GSDPPH
Trigger: GTGTGGCGGATCAGAGCCTCAAACACAAAGCTGGTG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGGGGAGGAGAGTTGGTaGACGGGCAGGTCCACAATA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAGEESW*TGRSTI
Trigger: TATTGTGGACCTGCCCGTTCACCAACTCTCCTCCCC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCCCTTGGCCATTGGCTaGTCTGAGGTCCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPPLAIG*SEVPKS
Trigger: ACTTTTGGGGACCTCAGAGCAGCCAATGGCCAAGGG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCCCTTGGCCATTGGCTaGTCTGAGGTCCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFPLAIG*SEVPKS
Trigger: ACTTTTGGGGACCTCAGAGCAGCCAATGGCCAAGGG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCCCTTGGCCATTGGCTaGTCTGAGGTCCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSPLAIG*SEVPKS
Trigger: ACTTTTGGGGACCTCAGAGCAGCCAATGGCCAAGGG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCCTTGGCCATTGGCTaGTCTGAGGTCCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLPLAIG*SEVPKS
Trigger: ACTTTTGGGGACCTCAGAGCAGCCAATGGCCAAGGG...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTATTCGGCGTCGTTGTTaGCCTTGGCCATTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSIRRRC*PWPLAA
Trigger: AGCAGCCAATGGCCAAGGGCAACAACGACGCCGAAT...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTATTCGGCGTCGTTGTTaGCCTTGGCCATTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPIRRRC*PWPLAA
Trigger: AGCAGCCAATGGCCAAGGGCAACAACGACGCCGAAT...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTATTCGGCGTCGTTGTTaGCCTTGGCCATTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFIRRRC*PWPLAA
Trigger: AGCAGCCAATGGCCAAGGGCAACAACGACGCCGAAT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTACTGGATCTCTCGGATaGTCCTTCGCTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFTGSLG*SFALSL
Trigger: GAGACTGAGAGCGAAGGAGCATCCGAGAGATCCAGT...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCGAGAAAGTGGGTTaGTTCCCTTCCTCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSAEKVG*FPSSFG
Trigger: TCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCTCCTGCCATCATATTaGACACAGCGGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFLLPSY*TQRTAA
Trigger: TGCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCTCCTGCCATCATATTaGACACAGCGGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALLPSY*TQRTAA
Trigger: TGCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCCTGCCATCATATTaGACACAGCGGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLLPSY*TQRTAA
Trigger: TGCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCACCAGCTTTGTGTTTaGGGCTCTGATCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAHQLCV*GSDPPH
Trigger: GTGTGGCGGATCAGAGCCTCAAACACAAAGCTGGTG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCCCAAGCCAACATCCTaGACCACTGAGAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPPKPTS*TTENKG
Trigger: TCCCTTGTTCTCAGTGGTGCAGGATGTTGGCTTGGG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCCCAAGCCAACATCCTaGACCACTGAGAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSPKPTS*TTENKG
Trigger: TCCCTTGTTCTCAGTGGTGCAGGATGTTGGCTTGGG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTAGGCCTGTAGGTGGCTaGACAGATGTAATTCGGCGT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVRPVGG*TDVIRR
Trigger: ACGCCGAATTACATCTGTCCAGCCACCTACAGGCCT...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTAGGCCTGTAGGTGGCTaGACAGATGTAATTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSRPVGG*TDVIRR
Trigger: ACGCCGAATTACATCTGTCCAGCCACCTACAGGCCT...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCTGGAGGCCTGTAGGTaGCTGGACAGATGTAATTCG +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALEACR*LDRCNS
Trigger: CGAATTACATCTGTCCAGCCACCTACAGGCCTCCAG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGGAGGCCTGTAGGTaGCTGGACAGATGTAATTCG +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLLEACR*LDRCNS
Trigger: CGAATTACATCTGTCCAGCCACCTACAGGCCTCCAG...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCAGCACCAGCAGCTTaGTTTCTTCAGTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLPAPAA*FLQSHS
Trigger: GGAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGG...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCCAGCACCAGCAGCTTaGTTTCTTCAGTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVPAPAA*FLQSHS
Trigger: GGAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCCAGCACCAGCAGCTTaGTTTCTTCAGTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFPAPAA*FLQSHS
Trigger: GGAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCTCTTTTCCTCTTCCTaGGTCTTTTCAGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALFSSS*VFSGCG
Trigger: GCCGCAGCCTGAAAAGACCCAGGAAGAGGAAAAGAG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGCCGAGAAAGTGGGTTaGTTCCCTTCCTCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAAEKVG*FPSSFG
Trigger: TCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTAAATCGTCACTCTCCTaGTCCATCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSKSSLS*SISSSS
Trigger: GGAGGAGGAGGAGATGGACCAGGAGAGTGACGATTT...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAAATCGTCACTCTCCTaGTCCATCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFKSSLS*SISSSS
Trigger: GGAGGAGGAGGAGATGGACCAGGAGAGTGACGATTT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGCTCCTGCCATCATATTaGACACAGCGGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQLLPSY*TQRTAA
Trigger: TGCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAG...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGCCCTGTTAACGTGTaGATGCAATTCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCCPVNV*MQFPVS
Trigger: GGAGACAGGGAATTGCATTCACACGTTAACAGGGCA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGCCCTGTTAACGTGTaGATGCAATTCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFCPVNV*MQFPVS
Trigger: GGAGACAGGGAATTGCATTCACACGTTAACAGGGCA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTGCCCTGTTAACGTGTaGATGCAATTCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVCPVNV*MQFPVS
Trigger: GGAGACAGGGAATTGCATTCACACGTTAACAGGGCA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTTCATCTACCTGGCTTaGGGAAGGGTTACCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFFIYLA*GRVTSQ
Trigger: CTGAGAGGTAACCCTTCCTCAAGCCAGGTAGATGAA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTCATCTACCTGGCTTaGGGAAGGGTTACCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFFIYLA*GRVTSQ
Trigger: CTGAGAGGTAACCCTTCCTCAAGCCAGGTAGATGAA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCCTCCTCTTGTTGTCTaGGTTGCTGTTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPPPLVV*VAVAVP
Trigger: AGGAACAGCAACAGCAACTCAGACAACAAGAGGAGG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCCTCCTCTTGTTGTCTaGGTTGCTGTTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCPPLVV*VAVAVP
Trigger: AGGAACAGCAACAGCAACTCAGACAACAAGAGGAGG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGAACACAGCGGACTaGTGCAACATGACCCATCAA +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLNTAD*CNMTHQ
Trigger: TTGATGGGTCATGTTGCAGCAGTCCGCTGTGTTCAA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCCCAAGCCAACATCCTaGACCACTGAGAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAPKPTS*TTENKG
Trigger: TCCCTTGTTCTCAGTGGTGCAGGATGTTGGCTTGGG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTGTCTTTTCAATCTGTTaGCCCAAGCCAACATCCTGC +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFVFSIC*PKPTSC
Trigger: GCAGGATGTTGGCTTGGGGCAACAGATTGAAAAGAC...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTTCGTCGTCTTTTGCTaGCCACAGAGAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSFVVFC*PQRAVP
Trigger: AGGAACTGCTCTCTGTGGGCAGCAAAAGACGACGAA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTTCGTCGTCTTTTGCTaGCCACAGAGAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAFVVFC*PQRAVP
Trigger: AGGAACTGCTCTCTGTGGGCAGCAAAAGACGACGAA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTTCGTCGTCTTTTGCTaGCCACAGAGAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLFVVFC*PQRAVP
Trigger: AGGAACTGCTCTCTGTGGGCAGCAAAAGACGACGAA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCAGTTCGTCGTCTTTTaGTGCCCACAGAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCQFVVF*CPQRAV
Trigger: AACTGCTCTCTGTGGGCAGCAAAAGACGACGAACTG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCAGTTCGTCGTCTTTTaGTGCCCACAGAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSQFVVF*CPQRAV
Trigger: AACTGCTCTCTGTGGGCAGCAAAAGACGACGAACTG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGAGGCCTGTAGGTGGCTaGACAGATGTAATTCGGCGT +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQRPVGG*TDVIRR
Trigger: ACGCCGAATTACATCTGTCCAGCCACCTACAGGCCT...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGGCCTGTAGGTGGCTaGACAGATGTAATTCGGCGT +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNRPVGG*TDVIRR
Trigger: ACGCCGAATTACATCTGTCCAGCCACCTACAGGCCT...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCTGGAGGCCTGTAGGTaGCTGGACAGATGTAATTCG +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSALEACR*LDRCNS
Trigger: CGAATTACATCTGTCCAGCCACCTACAGGCCTCCAG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGTTGCCGAGCTTGGTTaGGGCCCCGGTTCATACACT +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQVAELG*GPGSYT
Trigger: AGTGTATGAACCGGGGCCCCAACCAAGCTCGGCAAC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCGGGACAGTCAGGTTTaGGAGACTCCGGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSARDSQV*ETPDFV
Trigger: AACAAAATCCGGAGTCTCCCAAACCTGACTGTCCCG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCGGGACAGTCAGGTTTaGGAGACTCCGGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPRDSQV*ETPDFV
Trigger: AACAAAATCCGGAGTCTCCCAAACCTGACTGTCCCG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTAAATCGTCACTCTCCTaGTCCATCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAKSSLS*SISSSS
Trigger: GGAGGAGGAGGAGATGGACCAGGAGAGTGACGATTT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTAGTTGTTGGTGTTGCTaGACATGGTACAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPSCWCC*TWYKPS
Trigger: ACTGGGCTTGTACCATGTTCAGCAACACCAACAACT...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGAGTTGTTGGTGTTGCTaGACATGGTACAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLSCWCC*TWYKPS
Trigger: ACTGGGCTTGTACCATGTTCAGCAACACCAACAACT...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCGGTCCACTCCAGCTCTaGAACATTTTTAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAGPLQL*NIFSHS
Trigger: GGAATGGCTAAAAATGTTTCAGAGCTGGAGTGGACC...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGGTCCACTCCAGCTCTaGAACATTTTTAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFGPLQL*NIFSHS
Trigger: GGAATGGCTAAAAATGTTTCAGAGCTGGAGTGGACC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGGTCCACTCCAGCTCTaGAACATTTTTAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLGPLQL*NIFSHS
Trigger: GGAATGGCTAAAAATGTTTCAGAGCTGGAGTGGACC...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGTCCACTCCAGCTCTaGAACATTTTTAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSGPLQL*NIFSHS
Trigger: GGAATGGCTAAAAATGTTTCAGAGCTGGAGTGGACC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTGCCCTCAGTCAAAAGTaGAGCCTTTTATGTGATGAG +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFALSQK*SLLCDE
Trigger: CTCATCACATAAAAGGCTTCACTTTTGACTGAGGGC...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTGTGGCTCTTGGAGAATaGGGCAAACCATTTGACTGT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVVALGE*GKPFDC
Trigger: ACAGTCAAATGGTTTGCCTCATTCTCCAAGAGCCAC...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGTGGCTCTTGGAGAATaGGGCAAACCATTTGACTGT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCVALGE*GKPFDC
Trigger: ACAGTCAAATGGTTTGCCTCATTCTCCAAGAGCCAC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGTGGCTCTTGGAGAATaGGGCAAACCATTTGACTGT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLVALGE*GKPFDC
Trigger: ACAGTCAAATGGTTTGCCTCATTCTCCAAGAGCCAC...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCCTCCTCTTGTTGTCTaGGTTGCTGTTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAPPLVV*VAVAVP
Trigger: AGGAACAGCAACAGCAACTCAGACAACAAGAGGAGG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTACATGCAGCTTGACTaGGAAGAACTCGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFYMQLD*EELEGI
Trigger: TATTCCCTCGAGTTCTTCTCAGTCAAGCTGCATGTA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTGTGCTGTCTGATGTATaGACTTTTCCATGGACTGTG +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFVLSDV*TFPWTV
Trigger: CACAGTCCATGGAAAAGTGCATACATCAGACAGCAC...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAACACAGCGGACTGCTaGAACATGACCCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFNTADC*NMTHQN
Trigger: GTTTTGATGGGTCATGTTGCAGCAGTCCGCTGTGTT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCAACACAGCGGACTGCTaGAACATGACCCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSANTADC*NMTHQN
Trigger: GTTTTGATGGGTCATGTTGCAGCAGTCCGCTGTGTT...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCAACACAGCGGACTGCTaGAACATGACCCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCNTADC*NMTHQN
Trigger: GTTTTGATGGGTCATGTTGCAGCAGTCCGCTGTGTT...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTAACACAGCGGACTGCTaGAACATGACCCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVNTADC*NMTHQN
Trigger: GTTTTGATGGGTCATGTTGCAGCAGTCCGCTGTGTT...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGAACACAGCGGACTGCTaGAACATGACCCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLNTADC*NMTHQN
Trigger: GTTTTGATGGGTCATGTTGCAGCAGTCCGCTGTGTT...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTTGAACACAGCGGACTaGTGCAACATGACCCATCAA +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALNTAD*CNMTHQ
Trigger: TTGATGGGTCATGTTGCAGCAGTCCGCTGTGTTCAA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTTGAACACAGCGGACTaGTGCAACATGACCCATCAA +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLNTAD*CNMTHQ
Trigger: TTGATGGGTCATGTTGCAGCAGTCCGCTGTGTTCAA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCTATTAGTATGCCCCTaGAACGTGTGTAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLLVCP*NVCRQV
Trigger: AACCTGTCTACACACGTTGCAGGGGCATACTAATAG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTATTCCGACTCCCAACTaGACACACCAGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSIPTPN*THQLCV
Trigger: AACACAAAGCTGGTGTGTGCAGTTGGGAGTCGGAAT...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTATTCCGACTCCCAACTaGACACACCAGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPIPTPN*THQLCV
Trigger: AACACAAAGCTGGTGTGTGCAGTTGGGAGTCGGAAT...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTATTCCGACTCCCAACTaGACACACCAGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVIPTPN*THQLCV
Trigger: AACACAAAGCTGGTGTGTGCAGTTGGGAGTCGGAAT...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTATTCCGACTCCCAACTaGACACACCAGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFIPTPN*THQLCV
Trigger: AACACAAAGCTGGTGTGTGCAGTTGGGAGTCGGAAT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGTCTGAGTTGCTGTTaGTGTTCCTCCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFCLSCC*CSSSTT
Trigger: TGTGGTAGAGGAGGAACAGCAACAGCAACTCAGACA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGTCTGAGTTGCTGTTaGTGTTCCTCCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCCLSCC*CSSSTT
Trigger: TGTGGTAGAGGAGGAACAGCAACAGCAACTCAGACA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTCTGAGTTGCTGTTaGTGTTCCTCCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFCLSCC*CSSSTT
Trigger: TGTGGTAGAGGAGGAACAGCAACAGCAACTCAGACA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTGCATACAACGCACAGTaGAAGTATGCCCATATAAGG +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFAYNAQ*KYAHIR
Trigger: CCTTATATGGGCATACTTCCACTGTGCGTTGTATGC...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTACAGGTTTCAGTCTCTaGATCCCACACCTTTACCAT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFTGFSL*IPHLYH
Trigger: ATGGTAAAGGTGTGGGATCCAGAGACTGAAACCTGT...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGTTCAGCTTGAGTTGTaGCTCTTGGAGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPVQLEL*LLENEA
Trigger: TGCCTCATTCTCCAAGAGCCACAACTCAAGCTGAAC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGTTCAGCTTGAGTTGTaGCTCTTGGAGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFVQLEL*LLENEA
Trigger: TGCCTCATTCTCCAAGAGCCACAACTCAAGCTGAAC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGTTGCCGAGCTTGGTTaGGGCCCCGGTTCATACACT +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFVAELG*GPGSYT
Trigger: AGTGTATGAACCGGGGCCCCAACCAAGCTCGGCAAC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTGTTCTTCATCTACCTaGCTTGAGGAAGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFCSSST*LEEGLP
Trigger: AGGTAACCCTTCCTCAAGCCAGGTAGATGAAGAACA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGCTGGGAATCATTTTaGCCTCCAGGTCTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFCWESF*PPGLGS
Trigger: AGAACCTAGACCTGGAGGCCAAAATGATTCCCAGCA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGAGTTGTTGGTGTTGCTaGACATGGTACAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQSCWCC*TWYKPS
Trigger: ACTGGGCTTGTACCATGTTCAGCAACACCAACAACT...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTAGTTGTTGGTGTTGCTaGACATGGTACAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSASCWCC*TWYKPS
Trigger: ACTGGGCTTGTACCATGTTCAGCAACACCAACAACT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGGTCCACTCCAGCTCTaGAACATTTTTAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAGPLQL*NIFSHS
Trigger: GGAATGGCTAAAAATGTTTCAGAGCTGGAGTGGACC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTTTGGGTTCCAGGAATaGAAGCACATAGAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVFGFQE*KHIECQ
Trigger: TTGGCACTCTATGTGCTTTCATTCCTGGAACCCAAA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTTGGGTTCCAGGAATaGAAGCACATAGAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCFGFQE*KHIECQ
Trigger: TTGGCACTCTATGTGCTTTCATTCCTGGAACCCAAA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCGGACTGCTGCAACATaGCCCATCAAAACATGTAAA +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVRTAAT*PIKTCK
Trigger: TTTACATGTTTTGATGGGTCATGTTGCAGCAGTCCG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGGACTGCTGCAACATaGCCCATCAAAACATGTAAA +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFRTAAT*PIKTCK
Trigger: TTTACATGTTTTGATGGGTCATGTTGCAGCAGTCCG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCGGACTGCTGCAACATaGCCCATCAAAACATGTAAA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPRTAAT*PIKTCK
Trigger: TTTACATGTTTTGATGGGTCATGTTGCAGCAGTCCG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCAGGTCACAGCACTCTaGTGCTTGTTGGGACCTTGC +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFQVTAL*CLLGPC
Trigger: GCAAGGTCCCAACAAGCATCAGAGTGCTGTGACCTG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTTGTGTTTGAGGCTCTaGTCCGCCACACAACTCCCC +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFLCLRL*SATQLP
Trigger: GGGGAGTTGTGTGGCGGATCAGAGCCTCAAACACAA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCACCAGCTTTGTGTTTaGGGCTCTGATCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFHQLCV*GSDPPH
Trigger: GTGTGGCGGATCAGAGCCTCAAACACAAAGCTGGTG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGCCCTCAGTCAAAAGTaGAGCCTTTTATGTGATGAG +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCALSQK*SLLCDE
Trigger: CTCATCACATAAAAGGCTTCACTTTTGACTGAGGGC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGCCCTCAGTCAAAAGTaGAGCCTTTTATGTGATGAG +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFALSQK*SLLCDE
Trigger: CTCATCACATAAAAGGCTTCACTTTTGACTGAGGGC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTTTCACAGTTCAGCTTaGGTTGTGGCTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPFHSSA*VVALGE
Trigger: TTCTCCAAGAGCCACAACTCAAGCTGAACTGTGAAA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTTTCACAGTTCAGCTTaGGTTGTGGCTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVFHSSA*VVALGE
Trigger: TTCTCCAAGAGCCACAACTCAAGCTGAACTGTGAAA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTTCTTCTTGGTTTCCTaGGGAGTCCTCATCTACCGA +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQFFLVS*GVLIYR
Trigger: TCGGTAGATGAGGACTCCTCAGGAAACCAAGAAGAA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTTCTTCTTGGTTTCCTaGGGAGTCCTCATCTACCGA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAFFLVS*GVLIYR
Trigger: TCGGTAGATGAGGACTCCTCAGGAAACCAAGAAGAA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTACATACATGCAGCTTaGCTGAGAAGAACTCGAGGG +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQYIHAA*LRRTRG
Trigger: CCCTCGAGTTCTTCTCAGTCAAGCTGCATGTATGTA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGTGCTGTCTGATGTATaGACTTTTCCATGGACTGTG +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFVLSDV*TFPWTV
Trigger: CACAGTCCATGGAAAAGTGCATACATCAGACAGCAC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCGTGCTGTCTGATGTATaGACTTTTCCATGGACTGTG +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAVLSDV*TFPWTV
Trigger: CACAGTCCATGGAAAAGTGCATACATCAGACAGCAC...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTGTGCTGTCTGATGTATaGACTTTTCCATGGACTGTG +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFVLSDV*TFPWTV
Trigger: CACAGTCCATGGAAAAGTGCATACATCAGACAGCAC...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTTGAACACAGCGGACTaGTGCAACATGACCCATCAA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSALNTAD*CNMTHQ
Trigger: TTGATGGGTCATGTTGCAGCAGTCCGCTGTGTTCAA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCTATTAGTATGCCCCTaGAACGTGTGTAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCLLVCP*NVCRQV
Trigger: AACCTGTCTACACACGTTGCAGGGGCATACTAATAG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCTATTAGTATGCCCCTaGAACGTGTGTAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFLLVCP*NVCRQV
Trigger: AACCTGTCTACACACGTTGCAGGGGCATACTAATAG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCTGTTAACGTGTGAATaGAATTCCCTGTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLLTCE*NSLSPH
Trigger: ATGTGGAGACAGGGAATTGCATTCACACGTTAACAG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGATTCCGACTCCCAACTaGACACACCAGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQIPTPN*THQLCV
Trigger: AACACAAAGCTGGTGTGTGCAGTTGGGAGTCGGAAT...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCCCAAGCCAACATCCTaGACCACTGAGAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQPKPTS*TTENKG
Trigger: TCCCTTGTTCTCAGTGGTGCAGGATGTTGGCTTGGG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGGTCTTTTCAATCTGTTaGCCCAAGCCAACATCCTGC +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQVFSIC*PKPTSC
Trigger: GCAGGATGTTGGCTTGGGGCAACAGATTGAAAAGAC...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGTCTTTTCAATCTGTTaGCCCAAGCCAACATCCTGC +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAVFSIC*PKPTSC
Trigger: GCAGGATGTTGGCTTGGGGCAACAGATTGAAAAGAC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCTCATTTTGCAAAGCTaGCCTCAGTCAAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLILQS*PQSKVK
Trigger: CTTCACTTTTGACTGAGGGCAGCTTTGCAAAATGAG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGACTGGATCTCTCGGATaGTCCTTCGCTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQTGSLG*SFALSL
Trigger: GAGACTGAGAGCGAAGGAGCATCCGAGAGATCCAGT...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTTCCAAAAGCCAGCTTaGTACTTCTTGGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQFQKPA*YFLDLG
Trigger: GCCAAGGTCCAAGAAGTAGCAAGCTGGCTTTTGGAA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTTCCAAAAGCCAGCTTaGTACTTCTTGGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAFQKPA*YFLDLG
Trigger: GCCAAGGTCCAAGAAGTAGCAAGCTGGCTTTTGGAA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCTTGTTGTCTGAGTTaGTGTTGCTGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFSCCLS*CCCSSS
Trigger: AGAGGAGGAACAGCAACAGCAACTCAGACAACAAGA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTCTTGTTGTCTGAGTTaGTGTTGCTGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSCCLS*CCCSSS
Trigger: AGAGGAGGAACAGCAACAGCAACTCAGACAACAAGA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTCTTCCAACTGTCCTTaGTGGGAATCATTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSSNCP*WESFWP
Trigger: AGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTCTTCCAACTGTCCTTaGTGGGAATCATTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVSSNCP*WESFWP
Trigger: AGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTATTGGAGGAGACTATaGCCTGTCAAAGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFYWRRL*PVKALT
Trigger: AGTCAAGGCTTTGACAGGGCATAGTCTCCTCCAATA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCACAGGAACCAAGCCATaGTTTAGAGTAGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSATGTKP*FRVGFP
Trigger: GGGAAAACCTACTCTAAACCATGGCTTGGTTCCTGT...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCAAAAAGGGAGGCCTTaGGCAATGATGCTAATGCTA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPQKGRP*AMMLML
Trigger: TAGCATTAGCATCATTGCCCAAGGCCTCCCTTTTTG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGAGGCCTGTAGGTGGCTaGACAGATGTAATTCGGCGT +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQRPVGG*TDVIRR
Trigger: ACGCCGAATTACATCTGTCCAGCCACCTACAGGCCT...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCTTGTAGCAGGTCTTTaGGTTCCAGGAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFLVAGL*VPGMKA
Trigger: TGCTTTCATTCCTGGAACCCAAAGACCTGCTACAAG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTGTAGCAGGTCTTTaGGTTCCAGGAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLVAGL*VPGMKA
Trigger: TGCTTTCATTCCTGGAACCCAAAGACCTGCTACAAG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCTTGATGTGCAATaGTTCATCAATCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFSLDVQ*FINPLF
Trigger: GAAGAGGGGATTGATGAACCATTGCACATCAAGAGA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTGTATGCACTTTTCCATaGACTGTGTATGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFVCTFP*TVYETW
Trigger: CCAGGTTTCATACACAGTCCATGGAAAAGTGCATAC...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGCATACAACGCACAGTaGAAGTATGCCCATATAAGG +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPAYNAQ*KYAHIR
Trigger: CCTTATATGGGCATACTTCCACTGTGCGTTGTATGC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGCATACAACGCACAGTaGAAGTATGCCCATATAAGG +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFAYNAQ*KYAHIR
Trigger: CCTTATATGGGCATACTTCCACTGTGCGTTGTATGC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGCATACAACGCACAGTaGAAGTATGCCCATATAAGG +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCAYNAQ*KYAHIR
Trigger: CCTTATATGGGCATACTTCCACTGTGCGTTGTATGC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTACAGGTTTCAGTCTCTaGATCCCACACCTTTACCAT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFTGFSL*IPHLYH
Trigger: ATGGTAAAGGTGTGGGATCCAGAGACTGAAACCTGT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTACAGGTTTCAGTCTCTaGATCCCACACCTTTACCAT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSTGFSL*IPHLYH
Trigger: ATGGTAAAGGTGTGGGATCCAGAGACTGAAACCTGT...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCACAGGTTTCAGTCTCTaGATCCCACACCTTTACCAT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFTGFSL*IPHLYH
Trigger: ATGGTAAAGGTGTGGGATCCAGAGACTGAAACCTGT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCACTCTGATGCTTGTTaGGACCTTGCAATGTTTGTA +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFHSDAC*DLAMFV
Trigger: TACAAACATTGCAAGGTCCCAACAAGCATCAGAGTG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCCAGCACCAGCAGCTTaGTTTCTTCAGTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQPAPAA*FLQSHS
Trigger: GGAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGAGTTGTGGCTCTTaGAGAATGAGGCAAACCATT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLSCGS*RMRQTI
Trigger: AATGGTTTGCCTCATTCTCCAAGAGCCACAACTCAA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGTTCAGCTTGAGTTGTaGCTCTTGGAGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAVQLEL*LLENEA
Trigger: TGCCTCATTCTCCAAGAGCCACAACTCAAGCTGAAC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCTCTTTTCCTCTTCCTaGGTCTTTTCAGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQLFSSS*VFSGCG
Trigger: GCCGCAGCCTGAAAAGACCCAGGAAGAGGAAAAGAG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCAGCTTGCTACTTCTTaGACCTTGGCTAGACTATCA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFQLATS*TLARLS
Trigger: TGATAGTCTAGCCAAGGTCCAAGAAGTAGCAAGCTG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTGTTCTTCATCTACCTaGCTTGAGGAAGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLCSSST*LEEGLP
Trigger: AGGTAACCCTTCCTCAAGCCAGGTAGATGAAGAACA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATTGCTGGGAATCATTTTaGCCTCCAGGTCTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNCWESF*PPGLGS
Trigger: AGAACCTAGACCTGGAGGCCAAAATGATTCCCAGCA...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTCCTCTTGTTCTTCTTaGTTTCCTGAGGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPSSCSS*FPEESS
Trigger: TGAGGACTCCTCAGGAAACCAAGAAGAACAAGAGGA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCCTCTTGTTCTTCTTaGTTTCCTGAGGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFSSCSS*FPEESS
Trigger: TGAGGACTCCTCAGGAAACCAAGAAGAACAAGAGGA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCGGACCTCAGAACCATaGTCCAACTTTCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFRTSEP*SNFLFI
Trigger: AATGAAAAGAAAGTTGGACCATGGTTCTGAGGTCCG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAACGGAGAAGATTATTaGAGGAGACTATGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFNGEDY*RRLCPV
Trigger: GACAGGGCATAGTCTCCTCCAATAATCTTCTCCGTT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTCACAGATTCTAATGTaGACATGCTCAGGCACGTCA +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSSQILM*TCSGTS
Trigger: TGACGTGCCTGAGCATGTCCACATTAGAATCTGTGA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393956.9
3UTR CAA 72 bp CTCAGGACTCACAGAACCCAGGACAACTTGCCACCTTaGAGCAACATATGCATTGAAGAATGTATATGGAAG +
Preference number: 4 (lower is better)
Translates to: LRTHRTQDNLPP*SNICIEECIWK
Trigger: CTTCCATATACATTCTTCAATGCATATGTTGCTCAAAGGTGGCAAGTTGTCCTGGGTTCTGTGAGTCCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGAAATGAAGTCTCGTTaGAACTGGGGTTCTATCACT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSEMKSR*NWGSIT
Trigger: AGTGATAGAACCCCAGTTTCAACGAGACTTCATTTC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGAAATGAAGTCTCGTTaGAACTGGGGTTCTATCACT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPEMKSR*NWGSIT
Trigger: AGTGATAGAACCCCAGTTTCAACGAGACTTCATTTC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTTTGGGTTCCAGGAATaGAAGCACATAGAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQFGFQE*KHIECQ
Trigger: TTGGCACTCTATGTGCTTTCATTCCTGGAACCCAAA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCAATTCTGTGCTGTCTaGTGTATGCACTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSQFCAV*CMHFSM
Trigger: CATGGAAAAGTGCATACATCAGACAGCACAGAATTG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCAATTCTGTGCTGTCTaGTGTATGCACTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFQFCAV*CMHFSM
Trigger: CATGGAAAAGTGCATACATCAGACAGCACAGAATTG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTCAGACATTTGCCTGTaGCTGCTGACCAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVSDICL*LLTKLL
Trigger: TAAAAGTTTGGTCAGCAGTCACAGGCAAATGTCTGA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTCAGACATTTGCCTGTaGCTGCTGACCAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSDICL*LLTKLL
Trigger: TAAAAGTTTGGTCAGCAGTCACAGGCAAATGTCTGA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTCAGACATTTGCCTGTaGCTGCTGACCAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLSDICL*LLTKLL
Trigger: TAAAAGTTTGGTCAGCAGTCACAGGCAAATGTCTGA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCGGACTGCTGCAACATaGCCCATCAAAACATGTAAA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSARTAAT*PIKTCK
Trigger: TTTACATGTTTTGATGGGTCATGTTGCAGCAGTCCG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGTGCCCTGTTAACGTGTaGATGCAATTCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQCPVNV*MQFPVS
Trigger: GGAGACAGGGAATTGCATTCACACGTTAACAGGGCA...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATGCCCTCAGTCAAAAGTaGAGCCTTTTATGTGATGAG +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNALSQK*SLLCDE
Trigger: CTCATCACATAAAAGGCTTCACTTTTGACTGAGGGC...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCAACAATCCCATATTTaGAGACCTACTTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPQQSHI*RPTSST
Trigger: GGTGCTAGAAGTAGGTCTTCAAATATGGGATTGTTG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCAACAATCCCATATTTaGAGACCTACTTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSQQSHI*RPTSST
Trigger: GGTGCTAGAAGTAGGTCTTCAAATATGGGATTGTTG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCAACAATCCCATATTTaGAGACCTACTTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFQQSHI*RPTSST
Trigger: GGTGCTAGAAGTAGGTCTTCAAATATGGGATTGTTG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTTTCACAGTTCAGCTTaGGTTGTGGCTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQFHSSA*VVALGE
Trigger: TTCTCCAAGAGCCACAACTCAAGCTGAACTGTGAAA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGAGCTTAAGAGAGAATaGACAGAAAGTATCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCELKRE*TESIEG
Trigger: ACCCTCGATACTTTCTGTTCATTCTCTCTTAAGCTC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTGAGCTTAAGAGAGAATaGACAGAAAGTATCGAGGGT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVELKRE*TESIEG
Trigger: ACCCTCGATACTTTCTGTTCATTCTCTCTTAAGCTC...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCTACTATCATCAGACTaGTCAAAATCGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALLSSD*SKSSLS
Trigger: GGAGAGTGACGATTTTGATCAGTCTGATGATAGTAG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCTACTATCATCAGACTaGTCAAAATCGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFLLSSD*SKSSLS
Trigger: GGAGAGTGACGATTTTGATCAGTCTGATGATAGTAG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTTCTTCTCTTGATGTaGAATGGTTCATCAATCCCC +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFFLLLM*NGSSIP
Trigger: GGGGATTGATGAACCATTGCACATCAAGAGAAGAAA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCGCACAGTGGAAGTATaGCCATATAAGGTGTGTATA +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVRTVEV*PYKVCI
Trigger: TATACACACCTTATATGGGCATACTTCCACTGTGCG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCGCACAGTGGAAGTATaGCCATATAAGGTGTGTATA +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCRTVEV*PYKVCI
Trigger: TATACACACCTTATATGGGCATACTTCCACTGTGCG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCGCACAGTGGAAGTATaGCCATATAAGGTGTGTATA +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSRTVEV*PYKVCI
Trigger: TATACACACCTTATATGGGCATACTTCCACTGTGCG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATCTATTAGTATGCCCCTaGAACGTGTGTAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNLLVCP*NVCRQV
Trigger: AACCTGTCTACACACGTTGCAGGGGCATACTAATAG...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTTAACGTGTGAATaGAATTCCCTGTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLLTCE*NSLSPH
Trigger: ATGTGGAGACAGGGAATTGCATTCACACGTTAACAG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGTTAACGTGTGAATaGAATTCCCTGTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLLLTCE*NSLSPH
Trigger: ATGTGGAGACAGGGAATTGCATTCACACGTTAACAG...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCTGTTAACGTGTGAATaGAATTCCCTGTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLLTCE*NSLSPH
Trigger: ATGTGGAGACAGGGAATTGCATTCACACGTTAACAG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCATTTTGCAAAGCTaGCCTCAGTCAAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLILQS*PQSKVK
Trigger: CTTCACTTTTGACTGAGGGCAGCTTTGCAAAATGAG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTATGATTTGACAAATTaGCTAACCAGTCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFYDLTN*LTSLSC
Trigger: GCAGCTGAGACTGGTTAGGCAATTTGTCAAATCATA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTCTTGTTGTCTGAGTTaGTGTTGCTGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSASCCLS*CCCSSS
Trigger: AGAGGAGGAACAGCAACAGCAACTCAGACAACAAGA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTCTTCCAACTGTCCTTaGTGGGAATCATTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSASSNCP*WESFWP
Trigger: AGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATCTTGTAGCAGGTCTTTaGGTTCCAGGAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNLVAGL*VPGMKA
Trigger: TGCTTTCATTCCTGGAACCCAAAGACCTGCTACAAG...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTCTCTTGATGTGCAATaGTTCATCAATCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPSLDVQ*FINPLF
Trigger: GAAGAGGGGATTGATGAACCATTGCACATCAAGAGA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTCTCTTGATGTGCAATaGTTCATCAATCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSASLDVQ*FINPLF
Trigger: GAAGAGGGGATTGATGAACCATTGCACATCAAGAGA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCTCTTGATGTGCAATaGTTCATCAATCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFSLDVQ*FINPLF
Trigger: GAAGAGGGGATTGATGAACCATTGCACATCAAGAGA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCGTATGCACTTTTCCATaGACTGTGTATGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAVCTFP*TVYETW
Trigger: CCAGGTTTCATACACAGTCCATGGAAAAGTGCATAC...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGTATGCACTTTTCCATaGACTGTGTATGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPVCTFP*TVYETW
Trigger: CCAGGTTTCATACACAGTCCATGGAAAAGTGCATAC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTATGCACTTTTCCATaGACTGTGTATGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSVCTFP*TVYETW
Trigger: CCAGGTTTCATACACAGTCCATGGAAAAGTGCATAC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGGCATACAACGCACAGTaGAAGTATGCCCATATAAGG +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQAYNAQ*KYAHIR
Trigger: CCTTATATGGGCATACTTCCACTGTGCGTTGTATGC...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTACAGGTTTCAGTCTCTaGATCCCACACCTTTACCAT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSATGFSL*IPHLYH
Trigger: ATGGTAAAGGTGTGGGATCCAGAGACTGAAACCTGT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTGATCCACTCACCACATaGATACCATCAAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFDPLTT*IPSNCN
Trigger: ATTACAGTTTGATGGTATCCATGTGGTGAGTGGATC...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCACTCTGATGCTTGTTaGGACCTTGCAATGTTTGTA +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAHSDAC*DLAMFV
Trigger: TACAAACATTGCAAGGTCCCAACAAGCATCAGAGTG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCACTCTGATGCTTGTTaGGACCTTGCAATGTTTGTA +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFHSDAC*DLAMFV
Trigger: TACAAACATTGCAAGGTCCCAACAAGCATCAGAGTG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTTGAGTTGTGGCTCTTaGAGAATGAGGCAAACCATT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLSCGS*RMRQTI
Trigger: AATGGTTTGCCTCATTCTCCAAGAGCCACAACTCAA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTTGAGTTGTGGCTCTTaGAGAATGAGGCAAACCATT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLLSCGS*RMRQTI
Trigger: AATGGTTTGCCTCATTCTCCAAGAGCCACAACTCAA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTGCTCGTCTTTAAGATaGGAGATAATAGTGCCTACT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFCSSLR*EIIVPT
Trigger: AGTAGGCACTATTATCTCCCATCTTAAAGACGAGCA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTACTTCTTGGACCTTaGCTAGACTATCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLLLGP*LDYQKM
Trigger: CATCTTCTGATAGTCTAGCCAAGGTCCAAGAAGTAG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCAGCTTGCTACTTCTTaGACCTTGGCTAGACTATCA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAQLATS*TLARLS
Trigger: TGATAGTCTAGCCAAGGTCCAAGAAGTAGCAAGCTG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTCCTCTTGTTCTTCTTaGTTTCCTGAGGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQSSCSS*FPEESS
Trigger: TGAGGACTCCTCAGGAAACCAAGAAGAACAAGAGGA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCGGACCTCAGAACCATaGTCCAACTTTCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCRTSEP*SNFLFI
Trigger: AATGAAAAGAAAGTTGGACCATGGTTCTGAGGTCCG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCGGACCTCAGAACCATaGTCCAACTTTCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFRTSEP*SNFLFI
Trigger: AATGAAAAGAAAGTTGGACCATGGTTCTGAGGTCCG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCAAAACTCCTCTTGGTTaGCGAATACTCTCTACATGT +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAKTPLG*RILSTC
Trigger: ACATGTAGAGAGTATTCGTCAACCAAGAGGAGTTTT...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCATCTTCATCACAGTTTaGTGTGGTAGAGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFIFITV*CGRGSF
Trigger: AAAAGAGCCTCTACCACATCAAACTGTGATGAAGAT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGAAATGAAGTCTCGTTaGAACTGGGGTTCTATCACT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAEMKSR*NWGSIT
Trigger: AGTGATAGAACCCCAGTTTCAACGAGACTTCATTTC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATCAATTCTGTGCTGTCTaGTGTATGCACTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNQFCAV*CMHFSM
Trigger: CATGGAAAAGTGCATACATCAGACAGCACAGAATTG...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCAATTCTGTGCTGTCTaGTGTATGCACTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAQFCAV*CMHFSM
Trigger: CATGGAAAAGTGCATACATCAGACAGCACAGAATTG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAGAGGCTAATACTGTaGTTGATTGACATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFQRLIL*LIDIGN
Trigger: ATTGCCAATGTCAATCAATCACAGTATTAGCCTCTG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCAGAGGCTAATACTGTaGTTGATTGACATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCQRLIL*LIDIGN
Trigger: ATTGCCAATGTCAATCAATCACAGTATTAGCCTCTG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCAGAGGCTAATACTGTaGTTGATTGACATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVQRLIL*LIDIGN
Trigger: ATTGCCAATGTCAATCAATCACAGTATTAGCCTCTG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGAGCTTAAGAGAGAATaGACAGAAAGTATCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAELKRE*TESIEG
Trigger: ACCCTCGATACTTTCTGTTCATTCTCTCTTAAGCTC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTTTCTTCTCTTGATGTaGAATGGTTCATCAATCCCC +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFFLLLM*NGSSIP
Trigger: GGGGATTGATGAACCATTGCACATCAAGAGAAGAAA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCGCACAGTGGAAGTATaGCCATATAAGGTGTGTATA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSARTVEV*PYKVCI
Trigger: TATACACACCTTATATGGGCATACTTCCACTGTGCG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTACCATAAAATCATATaGTCCACTAACAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFYHKII*STNNPP
Trigger: AGGAGGGTTGTTAGTGGAGCATATGATTTTATGGTA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTGCTTGTTGGGACCTTaGAATGTTTGTAAACACTGT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSCLLGP*NVCKHC
Trigger: ACAGTGTTTACAAACATTGCAAGGTCCCAACAAGCA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTGCTTGTTGGGACCTTaGAATGTTTGTAAACACTGT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLCLLGP*NVCKHC
Trigger: ACAGTGTTTACAAACATTGCAAGGTCCCAACAAGCA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGCTTGTTGGGACCTTaGAATGTTTGTAAACACTGT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCCLLGP*NVCKHC
Trigger: ACAGTGTTTACAAACATTGCAAGGTCCCAACAAGCA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGCTTGTTGGGACCTTaGAATGTTTGTAAACACTGT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFCLLGP*NVCKHC
Trigger: ACAGTGTTTACAAACATTGCAAGGTCCCAACAAGCA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGCTCATTTTGCAAAGCTaGCCTCAGTCAAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQLILQS*PQSKVK
Trigger: CTTCACTTTTGACTGAGGGCAGCTTTGCAAAATGAG...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTATGATTTGACAAATTaGCTAACCAGTCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAYDLTN*LTSLSC
Trigger: GCAGCTGAGACTGGTTAGGCAATTTGTCAAATCATA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGTTCCAAAAGCCAGCTTaGTACTTCTTGGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQFQKPA*YFLDLG
Trigger: GCCAAGGTCCAAGAAGTAGCAAGCTGGCTTTTGGAA...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCATGGTACAAGCCCAGTaGTACTTGTATATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFMVQAQ*YLYILR
Trigger: TCTCAGAATATACAAGTACCACTGGGCTTGTACCAT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTATGGTACAAGCCCAGTaGTACTTGTATATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFMVQAQ*YLYILR
Trigger: TCTCAGAATATACAAGTACCACTGGGCTTGTACCAT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTAAAACATGTAAACACTaGCCTGTCTCAATATCCCAA +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFKTCKH*PVSISQ
Trigger: TTGGGATATTGAGACAGGCCAGTGTTTACATGTTTT...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTGATCCACTCACCACATaGATACCATCAAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVDPLTT*IPSNCN
Trigger: ATTACAGTTTGATGGTATCCATGTGGTGAGTGGATC...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGATCCACTCACCACATaGATACCATCAAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSDPLTT*IPSNCN
Trigger: ATTACAGTTTGATGGTATCCATGTGGTGAGTGGATC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGCACTCTGATGCTTGTTaGGACCTTGCAATGTTTGTA +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQHSDAC*DLAMFV
Trigger: TACAAACATTGCAAGGTCCCAACAAGCATCAGAGTG...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGAGTACAGTACAGGGTTaGGACAACAATCCCATATTT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLSTVQG*DNNPIF
Trigger: AAATATGGGATTGTTGTCCCAACCCTGTACTGTACT...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTAGTACAGTACAGGGTTaGGACAACAATCCCATATTT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSTVQG*DNNPIF
Trigger: AAATATGGGATTGTTGTCCCAACCCTGTACTGTACT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTGCTCGTCTTTAAGATaGGAGATAATAGTGCCTACT +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSACSSLR*EIIVPT
Trigger: AGTAGGCACTATTATCTCCCATCTTAAAGACGAGCA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
3UTR CAA 72 bp TTGACAAATTGCCTAACCAGTCTCAGCTGCAGATTTTaGCTCGTCTTTAAGATGGGAGATAATAGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: LTNCLTSLSCRF*LVFKMGDNSAY
Trigger: GTAGGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCAATTTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGGTACTTGTATATTCTaGGACTTTGCATGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLGTCIF*DFAWFL
Trigger: AAGAAACCATGCAAAGTCTCAGAATATACAAGTACC...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGTACTTGTATATTCTaGGACTTTGCATGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSGTCIF*DFAWFL
Trigger: AAGAAACCATGCAAAGTCTCAGAATATACAAGTACC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGGTACTTGTATATTCTaGGACTTTGCATGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCGTCIF*DFAWFL
Trigger: AAGAAACCATGCAAAGTCTCAGAATATACAAGTACC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCAGTTGTTGGTGTTGCTaGACATGGTACAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFSCWCC*TWYKPS
Trigger: ACTGGGCTTGTACCATGTTCAGCAACACCAACAACT...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGTTCACAACTATCAATaGGTTCATCTAAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPVHNYQ*VHLKQA
Trigger: TGCTTGCTTTAGATGAACTCATTGATAGTTGTGAAC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCGTTCACAACTATCAATaGGTTCATCTAAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAVHNYQ*VHLKQA
Trigger: TGCTTGCTTTAGATGAACTCATTGATAGTTGTGAAC...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGTTCACAACTATCAATaGGTTCATCTAAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFVHNYQ*VHLKQA
Trigger: TGCTTGCTTTAGATGAACTCATTGATAGTTGTGAAC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTCCATGGACTGTGTATaGAACCTGGTTTTATTACTT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPSMDCV*NLVLLL
Trigger: AAGTAATAAAACCAGGTTTCATACACAGTCCATGGA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTCCATGGACTGTGTATaGAACCTGGTTTTATTACTT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSMDCV*NLVLLL
Trigger: AAGTAATAAAACCAGGTTTCATACACAGTCCATGGA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTCCATGGACTGTGTATaGAACCTGGTTTTATTACTT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVSMDCV*NLVLLL
Trigger: AAGTAATAAAACCAGGTTTCATACACAGTCCATGGA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTACAGTTCCATCATCTaGGCTGGTAATTACAAAGTT +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFYSSII*AGNYKV
Trigger: AACTTTGTAATTACCAGCTCAGATGATGGAACTGTA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTACAGTTCCATCATCTaGGCTGGTAATTACAAAGTT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSYSSII*AGNYKV
Trigger: AACTTTGTAATTACCAGCTCAGATGATGGAACTGTA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTACAGTTCCATCATCTaGGCTGGTAATTACAAAGTT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPYSSII*AGNYKV
Trigger: AACTTTGTAATTACCAGCTCAGATGATGGAACTGTA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTACAGTTCCATCATCTaGGCTGGTAATTACAAAGTT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCYSSII*AGNYKV
Trigger: AACTTTGTAATTACCAGCTCAGATGATGGAACTGTA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCAGAGGCTAATACTGTaGTTGATTGACATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAQRLIL*LIDIGN
Trigger: ATTGCCAATGTCAATCAATCACAGTATTAGCCTCTG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGAGCAACATATGCATTaGAGAATGTATATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFEQHMH*RMYMEA
Trigger: TGCTTCCATATACATTCTTCAATGCATATGTTGCTC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGAGCAACATATGCATTaGAGAATGTATATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPEQHMH*RMYMEA
Trigger: TGCTTCCATATACATTCTTCAATGCATATGTTGCTC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTGAGCAACATATGCATTaGAGAATGTATATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVEQHMH*RMYMEA
Trigger: TGCTTCCATATACATTCTTCAATGCATATGTTGCTC...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTCACTCTTTATTATCTaGAACTCTTCCATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSASLFII*NSSILS
Trigger: GCTGAGAATGGAAGAGTTTCAGATAATAAAGAGTGA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTCACTCTTTATTATCTaGAACTCTTCCATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSLFII*NSSILS
Trigger: GCTGAGAATGGAAGAGTTTCAGATAATAAAGAGTGA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTCACTCTTTATTATCTaGAACTCTTCCATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPSLFII*NSSILS
Trigger: GCTGAGAATGGAAGAGTTTCAGATAATAAAGAGTGA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTCACTCTTTATTATCTaGAACTCTTCCATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSSLFII*NSSILS
Trigger: GCTGAGAATGGAAGAGTTTCAGATAATAAAGAGTGA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTTGTTTGTTTGCATGTaGCGCCTTTACTACAAAAAC +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLLFVCM*RLYYKN
Trigger: GTTTTTGTAGTAAAGGCGTCACATGCAAACAAACAA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTTGTTTGTTTGCATGTaGCGCCTTTACTACAAAAAC +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPLFVCM*RLYYKN
Trigger: GTTTTTGTAGTAAAGGCGTCACATGCAAACAAACAA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGATTCCGCTAGTTCTATaGTTTGACAAATTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLIPLVL*FDKLPN
Trigger: GTTAGGCAATTTGTCAAATCATAGAACTAGCGGAAT...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTATTCCGCTAGTTCTATaGTTTGACAAATTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFIPLVL*FDKLPN
Trigger: GTTAGGCAATTTGTCAAATCATAGAACTAGCGGAAT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTTCTTCTTGGTTTCCTaGGGAGTCCTCATCTACCGA +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFFFLVS*GVLIYR
Trigger: TCGGTAGATGAGGACTCCTCAGGAAACCAAGAAGAA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR GCA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTGGGGTTCTATCACTTaGATCATATGTTTTACTTGT +
Preference number: 4 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFWGSIT*IICFTC
Trigger: ACAAGTAAAACATATGATGCAAGTGATAGAACCCCA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTTTCTTCTCTTGATGTaGAATGGTTCATCAATCCCC +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAFLLLM*NGSSIP
Trigger: GGGGATTGATGAACCATTGCACATCAAGAGAAGAAA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTACCATAAAATCATATaGTCCACTAACAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFYHKII*STNNPP
Trigger: AGGAGGGTTGTTAGTGGAGCATATGATTTTATGGTA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTATGATTTGACAAATTaGCTAACCAGTCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQYDLTN*LTSLSC
Trigger: GCAGCTGAGACTGGTTAGGCAATTTGTCAAATCATA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTATGATTTGACAAATTaGCTAACCAGTCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAYDLTN*LTSLSC
Trigger: GCAGCTGAGACTGGTTAGGCAATTTGTCAAATCATA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTTCCCTCTCAAACCTTaGTTTAGTCTGTCAAACTTT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLFPLKP*FSLSNF
Trigger: AAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTTCCCTCTCAAACCTTaGTTTAGTCTGTCAAACTTT +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAFPLKP*FSLSNF
Trigger: AAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCTTGTAGCAGGTCTTTaGGTTCCAGGAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQLVAGL*VPGMKA
Trigger: TGCTTTCATTCCTGGAACCCAAAGACCTGCTACAAG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAAAACATGTAAACACTaGCCTGTCTCAATATCCCAA +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFKTCKH*PVSISQ
Trigger: TTGGGATATTGAGACAGGCCAGTGTTTACATGTTTT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTAAAACATGTAAACACTaGCCTGTCTCAATATCCCAA +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPKTCKH*PVSISQ
Trigger: TTGGGATATTGAGACAGGCCAGTGTTTACATGTTTT...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGATCCACTCACCACATaGATACCATCAAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSADPLTT*IPSNCN
Trigger: ATTACAGTTTGATGGTATCCATGTGGTGAGTGGATC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCTCTCTTGTCAGTTATaGTTTGTCATCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVLSCQL*FVISSS
Trigger: AGAAGAAGAGATGACAAACCATAACTGACAAGAGAG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCTCTCTTGTCAGTTATaGTTTGTCATCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPLSCQL*FVISSS
Trigger: AGAAGAAGAGATGACAAACCATAACTGACAAGAGAG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGAGTACAGTACAGGGTTaGGACAACAATCCCATATTT +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQSTVQG*DNNPIF
Trigger: AAATATGGGATTGTTGTCCCAACCCTGTACTGTACT...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATTGCTCGTCTTTAAGATaGGAGATAATAGTGCCTACT +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNCSSLR*EIIVPT
Trigger: AGTAGGCACTATTATCTCCCATCTTAAAGACGAGCA...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCAGCTTGCTACTTCTTaGACCTTGGCTAGACTATCA +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQQLATS*TLARLS
Trigger: TGATAGTCTAGCCAAGGTCCAAGAAGTAGCAAGCTG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATGTTCACAACTATCAATaGGTTCATCTAAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNVHNYQ*VHLKQA
Trigger: TGCTTGCTTTAGATGAACTCATTGATAGTTGTGAAC...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGAAATGAAGTCTCGTTaGAACTGGGGTTCTATCACT +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQEMKSR*NWGSIT
Trigger: AGTGATAGAACCCCAGTTTCAACGAGACTTCATTTC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTCCATGGACTGTGTATaGAACCTGGTTTTATTACTT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSASMDCV*NLVLLL
Trigger: AAGTAATAAAACCAGGTTTCATACACAGTCCATGGA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR TCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATGAGCAACATATGCATTaGAGAATGTATATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNEQHMH*RMYMEA
Trigger: TGCTTCCATATACATTCTTCAATGCATATGTTGCTC...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATTTGTTTGTTTGCATGTaGCGCCTTTACTACAAAAAC +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNLFVCM*RLYYKN
Trigger: GTTTTTGTAGTAAAGGCGTCACATGCAAACAAACAA...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTTTCACAGTTCAGCTTaGGTTGTGGCTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFFHSSA*VVALGE
Trigger: TTCTCCAAGAGCCACAACTCAAGCTGAACTGTGAAA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGAGCTTAAGAGAGAATaGACAGAAAGTATCGAGGGT +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQELKRE*TESIEG
Trigger: ACCCTCGATACTTTCTGTTCATTCTCTCTTAAGCTC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATATTCCGCTAGTTCTATaGTTTGACAAATTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNIPLVL*FDKLPN
Trigger: GTTAGGCAATTTGTCAAATCATAGAACTAGCGGAAT...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTATTCCGCTAGTTCTATaGTTTGACAAATTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAIPLVL*FDKLPN
Trigger: GTTAGGCAATTTGTCAAATCATAGAACTAGCGGAAT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTATATTCTGAGACTTTaGATGGTTTCTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLYILRL*MVSFPK
Trigger: CTTTGGGAAAGAAACCATGCAAAGTCTCAGAATATA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTATATTCTGAGACTTTaGATGGTTTCTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFYILRL*MVSFPK
Trigger: CTTTGGGAAAGAAACCATGCAAAGTCTCAGAATATA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTATATTCTGAGACTTTaGATGGTTTCTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSYILRL*MVSFPK
Trigger: CTTTGGGAAAGAAACCATGCAAAGTCTCAGAATATA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTGGGGTTCTATCACTTaGATCATATGTTTTACTTGT +
Preference number: 4 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPWGSIT*IICFTC
Trigger: ACAAGTAAAACATATGATGCAAGTGATAGAACCCCA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGTGCTGTCTGATGTATaGACTTTTCCATGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFVLSDV*TFPWTV
Trigger: CACAGTCCATGGAAAAGTGCATACATCAGACAGCAC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTTAGTATCAATTCTGTaGTGTCTGATGTATGCACTT +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLVSIL*CLMYAL
Trigger: AAGTGCATACATCAGACAGCACAGAATTGATACTAA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTTAGTATCAATTCTGTaGTGTCTGATGTATGCACTT +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVLVSIL*CLMYAL
Trigger: AAGTGCATACATCAGACAGCACAGAATTGATACTAA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTTAGTATCAATTCTGTaGTGTCTGATGTATGCACTT +
Preference number: 4 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLVSIL*CLMYAL
Trigger: AAGTGCATACATCAGACAGCACAGAATTGATACTAA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTTAGTATCAATTCTGTaGTGTCTGATGTATGCACTT +
Preference number: 4 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALVSIL*CLMYAL
Trigger: AAGTGCATACATCAGACAGCACAGAATTGATACTAA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCGCACAGTGGAAGTATaGCCATATAAGGTGTGTATA +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQRTVEV*PYKVCI
Trigger: TATACACACCTTATATGGGCATACTTCCACTGTGCG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTACCATAAAATCATATaGTCCACTAACAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAYHKII*STNNPP
Trigger: AGGAGGGTTGTTAGTGGAGCATATGATTTTATGGTA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATTACCATAAAATCATATaGTCCACTAACAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNYHKII*STNNPP
Trigger: AGGAGGGTTGTTAGTGGAGCATATGATTTTATGGTA...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCTCAATTCTTTACTTaGAGGCAAACTTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCSQFFT*RQTSLF
Trigger: AAAGAGTGAAGTTTGCCTGCAAGTAAAGAATTGAGA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTCTCAATTCTTTACTTaGAGGCAAACTTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLSQFFT*RQTSLF
Trigger: AAAGAGTGAAGTTTGCCTGCAAGTAAAGAATTGAGA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTAAACTGAATAGTTTCTaGTTTGTCAGTTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFKLNSF*FVSYSE
Trigger: CTCTGAGTAACTGACAAAGCAGAAACTATTCAGTTT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTAAACTGAATAGTTTCTaGTTTGTCAGTTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVKLNSF*FVSYSE
Trigger: CTCTGAGTAACTGACAAAGCAGAAACTATTCAGTTT...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTATGTTCATCTTCTCTaGTACTATCATCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLYVHLL*YYHQTD
Trigger: ATCAGTCTGATGATAGTAGCAGAGAAGATGAACATA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCGGACCTCAGAACCATaGTCCAACTTTCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFRTSEP*SNFLFI
Trigger: GATGAAAAGAAAGTTGGACCATGGTTCTGAGGTCCG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGTCTCTTGATGTGCAATaGTTCATCAATCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQSLDVQ*FINPLF
Trigger: GAAGAGGGGATTGATGAACCATTGCACATCAAGAGA...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTAAAACATGTAAACACTaGCCTGTCTCAATATCCCAA +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAKTCKH*PVSISQ
Trigger: TTGGGATATTGAGACAGGCCAGTGTTTACATGTTTT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCTCTCTTGTCAGTTATaGTTTGTCATCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSALSCQL*FVISSS
Trigger: AGAAGAAGAGATGACAAACCATAACTGACAAGAGAG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCTACTTCTTGGACCTTaGCTAGACTATCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQLLLGP*LDYQKM
Trigger: CATCTTCTGATAGTCTAGCCAAGGTCCAAGAAGTAG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCGGACCTCAGAACCATaGTCCAACTTTCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQRTSEP*SNFLFI
Trigger: AATGAAAAGAAAGTTGGACCATGGTTCTGAGGTCCG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000393956.9
ENST00000603548.6
CDS-3UTR TCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCAATTCTGTGCTGTCTaGTGTATGCACTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFQFCAV*CMHFSM
Trigger: CATGGAAAAGTGCATACATCAGACAGCACAGAATTG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTATATTCTGAGACTTTaGATGGTTTCTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQYILRL*MVSFPK
Trigger: CTTTGGGAAAGAAACCATGCAAAGTCTCAGAATATA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTATATTCTGAGACTTTaGATGGTTTCTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAYILRL*MVSFPK
Trigger: CTTTGGGAAAGAAACCATGCAAAGTCTCAGAATATA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATTGGGGTTCTATCACTTaGATCATATGTTTTACTTGT +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNWGSIT*IICFTC
Trigger: ACAAGTAAAACATATGATGCAAGTGATAGAACCCCA...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTGGGGTTCTATCACTTaGATCATATGTTTTACTTGT +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQWGSIT*IICFTC
Trigger: ACAAGTAAAACATATGATGCAAGTGATAGAACCCCA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGTTTCTTCTCTTGATGTaGAATGGTTCATCAATCCCC +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQFLLLM*NGSSIP
Trigger: GGGGATTGATGAACCATTGCACATCAAGAGAAGAAA...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATTCTCAATTCTTTACTTaGAGGCAAACTTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNSQFFT*RQTSLF
Trigger: AAAGAGTGAAGTTTGCCTGCAAGTAAAGAATTGAGA...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAAACTGAATAGTTTCTaGTTTGTCAGTTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNKLNSF*FVSYSE
Trigger: CTCTGAGTAACTGACAAAGCAGAAACTATTCAGTTT...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTATGTTCATCTTCTCTaGTACTATCATCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAYVHLL*YYHQTD
Trigger: ATCAGTCTGATGATAGTAGCAGAGAAGATGAACATA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR GCA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTATGTTCATCTTCTCTaGTACTATCATCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQYVHLL*YYHQTD
Trigger: ATCAGTCTGATGATAGTAGCAGAGAAGATGAACATA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGTATGCACTTTTCCATaGACTGTGTATGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFVCTFP*TVYETW
Trigger: CCAGGTTTCATACACAGTCCATGGAAAAGTGCATAC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGAGTACAGTACAGGGTTaGGACAACAATCCCATATTT +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQSTVQG*DNNPIF
Trigger: AAATATGGGATTGTTGTCCCAACCCTGTACTGTACT...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCTACTTCTTGGACCTTaGCTAGACTATCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFLLLGP*LDYQKM
Trigger: CATCTTCTGATAGTCTAGCCAAGGTCCAAGAAGTAG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR TCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGTTCACAACTATCAATaGGTTCATCTAAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQVHNYQ*VHLKQA
Trigger: TGCTTGCTTTAGATGAACTCATTGATAGTTGTGAAC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTTTCTTCTCTTGATGTaGAATGGTTCATCAATCCCC +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFFLLLM*NGSSIP
Trigger: GGGGATTGATGAACCATTGCACATCAAGAGAAGAAA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGTTCCCTCTCAAACCTTaGTTTAGTCTGTCAAACTTT +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQFPLKP*FSLSNF
Trigger: AAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAA...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTGCTCGTCTTTAAGATaGGAGATAATAGTGCCTACT +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFCSSLR*EIIVPT
Trigger: AGTAGGCACTATTATCTCCCATCTTAAAGACGAGCA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGAAACTGAATAGTTTCTaGTTTGTCAGTTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQKLNSF*FVSYSE
Trigger: CTCTGAGTAACTGACAAAGCAGAAACTATTCAGTTT...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCAAAACATGTAAACACTaGCCTGTCTCAATATCCCAA +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFKTCKH*PVSISQ
Trigger: TTGGGATATTGAGACAGGCCAGTGTTTACATGTTTT...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR GCA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTCTCAATTCTTTACTTaGAGGCAAACTTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: LNKTATEQSESTRKMAYFSQFFT*RQTSLF
Trigger: AAAGAGTGAAGTTTGCCTGCAAGTAAAGAATTGAGA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS GCA 90 bp GAAGGTCTCGGCGGCGGCCAGTGCAGGGGGACTGGATCTCTCGGATaGTCCTTCGCTCTCAGTCTCAGCGGCGGCGGCGGCGGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: EGLGGGQCRGTGSLG*SFALSLSGGGGGSG
Trigger: GCCGCTGCCGCCGCCGCCGCCGCTGAGACTGAGAGCGAAGGAGCATCCGAGAGATCCAGTCCCCCTGCACTGGCCGCCGCCGAGACCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS GCA 90 bp GCTCCCGCTGGCCCAGGTGAGAGCGAAGGTCTCGGCGGCGGCCAGTaGAGGGGGACTGGATCTCTCGGATGCTCCTTCGCTCTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: APAGPGESEGLGGGQ*RGTGSLGCSFALSL
Trigger: GAGACTGAGAGCGAAGGAGCATCCGAGAGATCCAGTCCCCCTGCACTGGCCGCCGCCGAGACCTTCGCTCTCACCTGGGCCAGCGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS TCA 90 bp GCCGCGGCGCCGAGAAAGTGGGTTGGTTCCCTTCCTCCTTCGGACTaGAGCGGCAGCTGCGGAAGGCTCCGGCGCGGTACTCCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: AAAPRKWVGSLPPSD*SGSCGRLRRGTPLF
Trigger: GAAAAGAGGAGTACCGCGCCGGAGCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000604095.1
ENST00000604872.6
ENST00000647166.1
CDS TCA 90 bp TCCTTCGGACTGAAGCGGCAGCTGCGGAAGGCTCCGGCGCGGTACTaGGGAAGAAGCGGTGCTCGTGTCGCTAAACCAGGCGGCAACCCG +
Preference number: 5 (lower is better)
Translates to: SFGLKRQLRKAPARY*GRSGARVAKPGGNP
Trigger: CGGGTTGCCGCCTGGTTTAGCGACACGAGCACCGCTTCTTCCTCAGTACCGCGCCGGAGCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603548.6
CDS TCA 90 bp GCCGCGGCGCCGAGAAAGTGGGTTGGTTCCCTTCCTCCTTCGGACTaGAGCGGCAGCTGCGGAAGGCTCCGGCGCGGTACTGAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: AAAPRKWVGSLPPSD*SGSCGRLRRGTEEE
Trigger: TTCTTCCTCAGTACCGCGCCGGAGCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603548.6
CDS GCA 90 bp TCCGGCGCGGTACTCCTCTTTTCCTCTTCCTGGGTCTTTTCAGGCTaGGGCTTCTGCCCGTCCAGGGCCACTTCTCCCGGGACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: SGAVLLFSSSWVFSG*GFCPSRATSPGTVR
Trigger: CCTGACTGTCCCGGGAGAAGTGGCCCTGGACGGGCAGAAGCCGCAGCCTGAAAAGACCCAGGAAGAGGAAAAGAGGAGTACCGCGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000604095.1
ENST00000647166.1
CDS CCA 90 bp GCAAGACCACTTTTAGAAAAGAGCCGCGGCGCCGAGAAAGTGGGTTaGTTCCCTTCCTCCTTCGGACTGAAGCGGCAGCTGCGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: ARPLLEKSRGAEKVG*FPSSFGLKRQLRKA
Trigger: AGCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGCTCTTTTCTAAAAGTGGTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647166.1
CDS CCA 90 bp CTTTCACAACTTTTAGAAAAGAGCCGCGGCGCCGAGAAAGTGGGTTaGTTCCCTTCCTCCTTCGGACTGAAGCGGCAGCTGCGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LSQLLEKSRGAEKVG*FPSSFGLKRQLRKA
Trigger: AGCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGCTCTTTTCTAAAAGTTGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS CCA 90 bp CGGCTTCTGCCCGTCCAGGGCCACTTCTCCCGGGACAGTCAGGTTTaGGAGACTCCGGATTTTGTTTTTGTAAAGTTTCCTCTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: RLLPVQGHFSRDSQV*ETPDFVFVKFPLGG
Trigger: TCCACCCAGAGGAAACTTTACAAAAACAAAATCCGGAGTCTCCCAAACCTGACTGTCCCGGGAGAAGTGGCCCTGGACGGGCAGAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS CCA 90 bp TTCACATTACTTTTAGAAAAGAGCCGCGGCGCCGAGAAAGTGGGTTaGTTCCCTTCCTCCTTCGGACTGAAGCGGCAGCTGCGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: FTLLLEKSRGAEKVG*FPSSFGLKRQLRKA
Trigger: AGCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGCTCTTTTCTAAAAGTAATGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGGGTGGTTGCCGAGCTaGGTTGGGGCCCCGGTTCAT +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFGWLPS*VGAPVH
Trigger: ATGAACCGGGGCCCCAACCAAGCTCGGCAACCACCC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTGGTTGCCGAGCTTGGTaGGGGCCCCGGTTCATACAC +
Preference number: 5 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVGCRAW*GPRFIH
Trigger: GTGTATGAACCGGGGCCCCAACCAAGCTCGGCAACC...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS GCA 90 bp AGGAAGGGTTACCTCTCAGAGAGCCTCCAGTTCGTCGTCTTTTGCTaGCCACAGAGAGCAGTTCCTGATTCATTTCCAAAAGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RKGYLSESLQFVVFC*PQRAVPDSFPKASL
Trigger: CAAGCTGGCTTTTGGAAATGAATCAGGAACTGCTCTCTGTGGGCAGCAAAAGACGACGAACTGGAGGCTCTCTGAGAGGTAACCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGTTGCCCTTGGCCATaGGCTGCTCTGAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCCCPWP*AALRSP
Trigger: TGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTGTTGCCCTTGGCCATaGGCTGCTCTGAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPCCPWP*AALRSP
Trigger: TGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTGTTGCCCTTGGCCATaGGCTGCTCTGAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVCCPWP*AALRSP
Trigger: TGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGTTGCCCTTGGCCATaGGCTGCTCTGAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFCCPWP*AALRSP
Trigger: TGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGCGTCGTTGTTGCCCTaGGCCATTGGCTGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPASLLP*AIGCSE
Trigger: CTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGCGTCGTTGTTGCCCTaGGCCATTGGCTGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFASLLP*AIGCSE
Trigger: CTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGGGTTGCCGAGCTTGGTaGGGGCCCCGGTTCATACAC +
Preference number: 5 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQGCRAW*GPRFIH
Trigger: GTGTATGAACCGGGGCCCCAACCAAGCTCGGCAACC...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCGCCGAGAAAGTGGGTaGGTTCCCTTCCTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSARRESG*VPFLLR
Trigger: CCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCGCCGAGAAAGTGGGTaGGTTCCCTTCCTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPRRESG*VPFLLR
Trigger: CCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS GCA 90 bp CCAGGTCTAGGTTCTACTCCAACAACTTCACCATTCCTTGCAGTGTaGTCCTCCTCTTGTTGTCTGAGTTGCTGTTGCTGTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PGLGSTPTTSPFLAV*SSSCCLSCCCCSSS
Trigger: AGAGGAGGAACAGCAACAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTTGTTGGAGTAGAACCTAGACCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS GCA 90 bp TTGGCCTCCAGGTCTAGGTTCTACTCCAACAACTTCACCATTCCTTaGAGTGTGCTCCTCCTCTTGTTGTCTGAGTTGCTGTTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LASRSRFYSNNFTIP*SVLLLLLSELLLLF
Trigger: GAACAGCAACAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTTGTTGGAGTAGAACCTAGACCTGGAGGCCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGGCGTCGTTGTTGCCCTaGGCCATTGGCTGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQASLLP*AIGCSE
Trigger: CTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGC...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCAATTCGGCGTCGTTGTaGCCCTTGGCCATTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSANSASL*PLAIGC
Trigger: GCAGCCAATGGCCAAGGGCAACAACGACGCCGAATT...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTAATTCGGCGTCGTTGTaGCCCTTGGCCATTGGCTGC +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFNSASL*PLAIGC
Trigger: GCAGCCAATGGCCAAGGGCAACAACGACGCCGAATT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGAATTCGGCGTCGTTGTaGCCCTTGGCCATTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLNSASL*PLAIGC
Trigger: GCAGCCAATGGCCAAGGGCAACAACGACGCCGAATT...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTGTAATTCGGCGTCGTaGTTGCCCTTGGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFCNSAS*LPLAIG
Trigger: GCCAATGGCCAAGGGCAACAACGACGCCGAATTACA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCCAGTTCGTCGTCTTTaGCTGCCCACAGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFPVRRL*LPTESS
Trigger: ACTGCTCTCTGTGGGCAGCAAAAGACGACGAACTGG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGAATGGGGAGGAGAGTaGGTGAACGGGCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAEWGGE*VNGQVH
Trigger: GTGGACCTGCCCGTTCACCAACTCTCCTCCCCATTC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTAATTCGGCGTCGTTGTaGCCCTTGGCCATTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSANSASL*PLAIGC
Trigger: GCAGCCAATGGCCAAGGGCAACAACGACGCCGAATT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAATTCGGCGTCGTTGTaGCCCTTGGCCATTGGCTGC +
Preference number: 5 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNNSASL*PLAIGC
Trigger: GCAGCCAATGGCCAAGGGCAACAACGACGCCGAATT...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTGTAATTCGGCGTCGTaGTTGCCCTTGGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVCNSAS*LPLAIG
Trigger: GCCAATGGCCAAGGGCAACAACGACGCCGAATTACA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTGTAATTCGGCGTCGTaGTTGCCCTTGGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFCNSAS*LPLAIG
Trigger: GCCAATGGCCAAGGGCAACAACGACGCCGAATTACA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTGTAATTCGGCGTCGTaGTTGCCCTTGGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLCNSAS*LPLAIG
Trigger: GCCAATGGCCAAGGGCAACAACGACGCCGAATTACA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTAGCACCTTAGGAGATTaGAGTTCTCCTCGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFSTLGD*SSPRLQ
Trigger: CTGGAGGCGAGGAGAACTCAAATCTCCTAAGGTGCT...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCCTCCTGCCATCATATaGAACACAGCGGACTGCTGC +
Preference number: 5 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVPPAII*NTADCC
Trigger: GCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAGG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCTCCTGCCATCATATaGAACACAGCGGACTGCTGC +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFPPAII*NTADCC
Trigger: GCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAGG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCCTCCTGCCATCATATaGAACACAGCGGACTGCTGC +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSPPAII*NTADCC
Trigger: GCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAGG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGGGTGGTTGCCGAGCTaGGTTGGGGCCCCGGTTCAT +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFGWLPS*VGAPVH
Trigger: ATGAACCGGGGCCCCAACCAAGCTCGGCAACCACCC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCCGGGACAGTCAGGTTaGGGAGACTCCGGATTTTGT +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFPGQSG*GDSGFC
Trigger: ACAAAATCCGGAGTCTCCCAAACCTGACTGTCCCGG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCCAGTTCGTCGTCTTTaGCTGCCCACAGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSPVRRL*LPTESS
Trigger: ACTGCTCTCTGTGGGCAGCAAAAGACGACGAACTGG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCCAGTTCGTCGTCTTTaGCTGCCCACAGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAPVRRL*LPTESS
Trigger: ACTGCTCTCTGTGGGCAGCAAAAGACGACGAACTGG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS TCA 90 bp CAACAACTTCACCATTCCTTGCAGTGTGCTCCTCCTCTTGTTGTCTaGGTTGCTGTTGCTGTTCCTCCTCTACCACACGATTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: QQLHHSLQCAPPLVV*VAVAVPPLPHDSSV
Trigger: AACAGATGAATCGTGTGGTAGAGGAGGAACAGCAACAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTTGTTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGCGTCGTTGTTGCCCTaGGCCATTGGCTGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQASLLP*AIGCSE
Trigger: CTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATTGTAATTCGGCGTCGTaGTTGCCCTTGGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNCNSAS*LPLAIG
Trigger: GCCAATGGCCAAGGGCAACAACGACGCCGAATTACA...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTGCTTGTAGCAGGTCTTaGGGTTCCAGGAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFACSRS*GSRNES
Trigger: GCTTTCATTCCTGGAACCCAAAGACCTGCTACAAGC...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCAGCACCTTAGGAGATTaGAGTTCTCCTCGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCSTLGD*SSPRLQ
Trigger: CTGGAGGCGAGGAGAACTCAAATCTCCTAAGGTGCT...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAGCACCTTAGGAGATTaGAGTTCTCCTCGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFSTLGD*SSPRLQ
Trigger: CTGGAGGCGAGGAGAACTCAAATCTCCTAAGGTGCT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTAGCACCTTAGGAGATTaGAGTTCTCCTCGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSTLGD*SSPRLQ
Trigger: CTGGAGGCGAGGAGAACTCAAATCTCCTAAGGTGCT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGAGCACCTTAGGAGATTaGAGTTCTCCTCGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLSTLGD*SSPRLQ
Trigger: CTGGAGGCGAGGAGAACTCAAATCTCCTAAGGTGCT...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGCCTCCTGCCATCATATaGAACACAGCGGACTGCTGC +
Preference number: 5 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQPPAII*NTADCC
Trigger: GCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAGG...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTCCAGCACCAGCAGCTaGGTTTCTTCAGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVSSTSS*VSSVPF
Trigger: GAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGGA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCTCCAGCACCAGCAGCTaGGTTTCTTCAGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSASSTSS*VSSVPF
Trigger: GAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGGA...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCCAGCACCAGCAGCTaGGTTTCTTCAGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCSSTSS*VSSVPF
Trigger: GAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGGA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCCAGCACCAGCAGCTaGGTTTCTTCAGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFSSTSS*VSSVPF
Trigger: GAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGGA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTAGTGTGCTCCTCCTCTaGTTGTCTGAGTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFSVLLL*LSELLL
Trigger: CAACAGCAACTCAGACAACAAGAGGAGGAGCACACT...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCAACTTCACCATTCCTaGCAGTGTGCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFQLHHS*QCAPPL
Trigger: AAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTTG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCGTGTGTCCGGCTGCTaGGCAGTCTCTGACAATATA +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCRVSGC*AVSDNI
Trigger: TATATTGTCAGAGACTGCCAAGCAGCCGGACACACG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCAAGGCCTGCTGCTTTaGTCTTTCAACCTTCCCCTA +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSQGLLL*SFNLPL
Trigger: TAGGGGAAGGTTGAAAGACAAAAGCAGCAGGCCTTG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTGCTTGTAGCAGGTCTTaGGGTTCCAGGAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFACSRS*GSRNES
Trigger: GCTTTCATTCCTGGAACCCAAAGACCTGCTACAAGC...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGCTTGTAGCAGGTCTTaGGGTTCCAGGAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLACSRS*GSRNES
Trigger: GCTTTCATTCCTGGAACCCAAAGACCTGCTACAAGC...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTCCAGCACCAGCAGCTaGGTTTCTTCAGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQSSTSS*VSSVPF
Trigger: GAATGGGACTGAAGAAACCAAGCTGCTGGTGCTGGA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGGTCTTTTCAATCTGTaGCCCCAAGCCAACATCCTG +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCGLFNL*PQANIL
Trigger: CAGGATGTTGGCTTGGGGCAACAGATTGAAAAGACC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGGTCTTTTCAATCTGTaGCCCCAAGCCAACATCCTG +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFGLFNL*PQANIL
Trigger: CAGGATGTTGGCTTGGGGCAACAGATTGAAAAGACC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGGTCTTTTCAATCTGTaGCCCCAAGCCAACATCCTG +
Preference number: 5 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLGLFNL*PQANIL
Trigger: CAGGATGTTGGCTTGGGGCAACAGATTGAAAAGACC...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCAGCAGACGCCTCTCTaGTCAGTTATGGTTTGTCAT +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFQQTPL*SVMVCH
Trigger: ATGACAAACCATAACTGACAAGAGAGGCGTCTGCTG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCTTCATCTACCTGGCTaGAGGAAGGGTTACCTCTCA +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSALHLPG*RKGYLS
Trigger: TGAGAGGTAACCCTTCCTCAAGCCAGGTAGATGAAG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCTTCATCTACCTGGCTaGAGGAAGGGTTACCTCTCA +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCLHLPG*RKGYLS
Trigger: TGAGAGGTAACCCTTCCTCAAGCCAGGTAGATGAAG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCTTCATCTACCTGGCTaGAGGAAGGGTTACCTCTCA +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFLHLPG*RKGYLS
Trigger: TGAGAGGTAACCCTTCCTCAAGCCAGGTAGATGAAG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCTCTTGTTGTCTGAGTaGCTGTTGCTGTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFLLLSE*LLLFLL
Trigger: GAGGAGGAACAGCAACAGCAACTCAGACAACAAGAG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCTCTTGTTGTCTGAGTaGCTGTTGCTGTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCLLLSE*LLLFLL
Trigger: GAGGAGGAACAGCAACAGCAACTCAGACAACAAGAG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTAGTGTGCTCCTCCTCTaGTTGTCTGAGTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSVLLL*LSELLL
Trigger: CAACAGCAACTCAGACAACAAGAGGAGGAGCACACT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAACTTCACCATTCCTaGCAGTGTGCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFQLHHS*QCAPPL
Trigger: AAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTTG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTTGCTGGGAATCATTTaGGCCTCCAGGTCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLLGII*ASRSRF
Trigger: GAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTTGCTGGGAATCATTTaGGCCTCCAGGTCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLLGII*ASRSRF
Trigger: GAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAA...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCTCATCCTCCTCATCTaGTTCACCAGCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLILLI*FTSMFF
Trigger: GAAGAACATGCTGGTGAACAAGATGAGGAGGATGAG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGAATGGGGAGGAGAGTaGGTGAACGGGCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFEWGGE*VNGQVH
Trigger: GTGGACCTGCCCGTTCACCAACTCTCCTCCCCATTC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS TCA 90 bp TTCAGTGATTCTGTGCCCCCGTGTGTCCGGCTGCTTGGCAGTCTCTaGCAATATAAACCTTTTTCAGGTAGGTATGTCACAGATTCTAAT +
Preference number: 5 (lower is better)
Translates to: FSDSVPPCVRLLGSL*QYKPFSGRYVTDSN
Trigger: ATTAGAATCTGTGACATACCTACCTGAAAAAGGTTTATATTGTCAGAGACTGCCAAGCAGCCGGACACACGGGGGCACAGAATCACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393956.9
ENST00000604822.1
CDS GCA 90 bp ACAGGTTTCAGTCTCTGGATCCCACACCTTTACCATAAAATCATATaGTCCACTAACAACCCTCCTGCCATCATATTGAACACAGCGGAC +
Preference number: 5 (lower is better)
Translates to: TGFSLWIPHLYHKII*STNNPPAIILNTAD
Trigger: GTCCGCTGTGTTCAATATGATGGCAGGAGGGTTGTTAGTGGAGCATATGATTTTATGGTAAAGGTGTGGGATCCAGAGACTGAAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000647183.1
CDS GCA 90 bp GTTCCATTCCACTTGTTAACGACTGGTGCCCTGTTAACGTGTGAATaGAATTCCCTGTCTCCACATCCCAAACACGGATTGATGTATCAA +
Preference number: 5 (lower is better)
Translates to: VPFHLLTTGALLTCE*NSLSPHPKHGLMYQ
Trigger: TTGATACATCAATCCGTGTTTGGGATGTGGAGACAGGGAATTGCATTCACACGTTAACAGGGCACCAGTCGTTAACAAGTGGAATGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000604316.1
ENST00000647183.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCAAAAGTTGTTGGTGTaGCTGAACATGGTACAAGCC +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFQKLLV*LNMVQA
Trigger: GGCTTGTACCATGTTCAGCAACACCAACAACTTTTG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGGTCCCCAAAAGTTGTaGGTGTTGCTGAACATGGTA +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSGPQKL*VLLNMV
Trigger: TACCATGTTCAGCAACACCAACAACTTTTGGGGACC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGGTCCCCAAAAGTTGTaGGTGTTGCTGAACATGGTA +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPGPQKL*VLLNMV
Trigger: TACCATGTTCAGCAACACCAACAACTTTTGGGGACC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGGTCCCCAAAAGTTGTaGGTGTTGCTGAACATGGTA +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCGPQKL*VLLNMV
Trigger: TACCATGTTCAGCAACACCAACAACTTTTGGGGACC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTAATGTTCTCAGACATTaGCCTGTGACTGCTGACCAA +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFNVLRH*PVTADQ
Trigger: TTGGTCAGCAGTCACAGGCAAATGTCTGAGAACATT...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCATCCCAAACACGGATaGATGTATCAAGAGATCCAC +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFHPKHG*MYQEIH
Trigger: GTGGATCTCTTGATACATCAATCCGTGTTTGGGATG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGGGTCTTTTCAATCTGTaGCCCCAAGCCAACATCCTG +
Preference number: 5 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQGLFNL*PQANIL
Trigger: CAGGATGTTGGCTTGGGGCAACAGATTGAAAAGACC...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCAGCAGACGCCTCTCTaGTCAGTTATGGTTTGTCAT +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFQQTPL*SVMVCH
Trigger: ATGACAAACCATAACTGACAAGAGAGGCGTCTGCTG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCTTGAGTTGTGGCTCTaGGAGAATGAGGCAAACCAT +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSLELWL*ENEANH
Trigger: ATGGTTTGCCTCATTCTCCAAGAGCCACAACTCAAG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCTTGAGTTGTGGCTCTaGGAGAATGAGGCAAACCAT +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPLELWL*ENEANH
Trigger: ATGGTTTGCCTCATTCTCCAAGAGCCACAACTCAAG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCACAGTTCAGCTTGAGTaGTGGCTCTTGGAGAATGAG +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCTVQLE*WLLENE
Trigger: CTCATTCTCCAAGAGCCACAACTCAAGCTGAACTGT...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCACAGTTCAGCTTGAGTaGTGGCTCTTGGAGAATGAG +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSATVQLE*WLLENE
Trigger: CTCATTCTCCAAGAGCCACAACTCAAGCTGAACTGT...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTACAGTTCAGCTTGAGTaGTGGCTCTTGGAGAATGAG +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPTVQLE*WLLENE
Trigger: CTCATTCTCCAAGAGCCACAACTCAAGCTGAACTGT...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTCTCAGCTGCAGATTTTaGCTCGTCTTTAAGATGGGA +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLSCRF*LVFKMG
Trigger: TCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAG...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTTCCAAAAGCCAGCTaGCTACTTCTTGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFFPKAS*LLLGPW
Trigger: CCAAGGTCCAAGAAGTAGCAAGCTGGCTTTTGGAAA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCTCTTGTTGTCTGAGTaGCTGTTGCTGTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSALLLSE*LLLFLL
Trigger: GAGGAGGAACAGCAACAGCAACTCAGACAACAAGAG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS CCA 90 bp TCCATGGGAATAGATTCAATGAAAGTATGCCAACAGTATTGGGTGTaGCTACATACCACATTTCATCTGAATCTGCCCCAGGGCAGTAGT +
Preference number: 5 (lower is better)
Translates to: SMGIDSMKVCQQYWV*LHTTFHLNLPQGSS
Trigger: ACTACTGCCCTGGGGCAGATTCAGATGAAATGTGGTATGTAGCCACACCCAATACTGTTGGCATACTTTCATTGAATCTATTCCCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 90 bp GTTTCTTCCATGGGAATAGATTCAATGAAAGTATGCCAACAGTATTaGGTGTGGCTACATACCACATTTCATCTGAATCTGCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: VSSMGIDSMKVCQQY*VWLHTTFHLNLPQG
Trigger: GCCCTGGGGCAGATTCAGATGAAATGTGGTATGTAGCCACACCCAATACTGTTGGCATACTTTCATTGAATCTATTCCCATGGAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATACAAAAAGGGAGGCCTaGGGCAATGATGCTAATGCT +
Preference number: 5 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNTKREA*GNDANA
Trigger: AGCATTAGCATCATTGCCCAAGGCCTCCCTTTTTGT...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCAAGCCCAGTGGTACTaGTATATTCTGAGACTTTGC +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPQAQWY*YILRLC
Trigger: GCAAAGTCTCAGAATATACAAGTACCACTGGGCTTG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCCAAGCCCAGTGGTACTaGTATATTCTGAGACTTTGC +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSAQAQWY*YILRLC
Trigger: GCAAAGTCTCAGAATATACAAGTACCACTGGGCTTG...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCAAAAGTTGTTGGTGTaGCTGAACATGGTACAAGCC +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFQKLLV*LNMVQA
Trigger: GGCTTGTACCATGTTCAGCAACACCAACAACTTTTG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCAAAAGTTGTTGGTGTaGCTGAACATGGTACAAGCC +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPQKLLV*LNMVQA
Trigger: GGCTTGTACCATGTTCAGCAACACCAACAACTTTTG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCAAAAGTTGTTGGTGTaGCTGAACATGGTACAAGCC +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSQKLLV*LNMVQA
Trigger: GGCTTGTACCATGTTCAGCAACACCAACAACTTTTG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTCAATCCCCTCTTCTTaGCATTTCTCTCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSIPSS*HFSLQR
Trigger: TCTCTGGAGAGAGAAATGCAAAGAAGAGGGGATTGA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCAATCCCCTCTTCTTaGCATTTCTCTCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCSIPSS*HFSLQR
Trigger: TCTCTGGAGAGAGAAATGCAAAGAAGAGGGGATTGA...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAATGTTCTCAGACATTaGCCTGTGACTGCTGACCAA +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFNVLRH*PVTADQ
Trigger: TTGGTCAGCAGTCACAGGCAAATGTCTGAGAACATT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCAATGTTCTCAGACATTaGCCTGTGACTGCTGACCAA +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSANVLRH*PVTADQ
Trigger: TTGGTCAGCAGTCACAGGCAAATGTCTGAGAACATT...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTAATGTTCTCAGACATTaGCCTGTGACTGCTGACCAA +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFNVLRH*PVTADQ
Trigger: TTGGTCAGCAGTCACAGGCAAATGTCTGAGAACATT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTTCTGCATTCCACACTTaGAGTGTCCGATCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPSAFHT*SVRSVD
Trigger: ATCTACAGATCGGACACTCAAAGTGTGGAATGCAGA...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCTGCATTCCACACTTaGAGTGTCCGATCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFSAFHT*SVRSVD
Trigger: ATCTACAGATCGGACACTCAAAGTGTGGAATGCAGA...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTCTGCATTCCACACTTaGAGTGTCCGATCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFSAFHT*SVRSVD
Trigger: ATCTACAGATCGGACACTCAAAGTGTGGAATGCAGA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCATCCCAAACACGGATaGATGTATCAAGAGATCCAC +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFHPKHG*MYQEIH
Trigger: GTGGATCTCTTGATACATCAATCCGTGTTTGGGATG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTCATCCCAAACACGGATaGATGTATCAAGAGATCCAC +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSHPKHG*MYQEIH
Trigger: GTGGATCTCTTGATACATCAATCCGTGTTTGGGATG...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCCATCCCAAACACGGATaGATGTATCAAGAGATCCAC +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCHPKHG*MYQEIH
Trigger: GTGGATCTCTTGATACATCAATCCGTGTTTGGGATG...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCATCCCAAACACGGATaGATGTATCAAGAGATCCAC +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFHPKHG*MYQEIH
Trigger: GTGGATCTCTTGATACATCAATCCGTGTTTGGGATG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTAGAAAGTCTCATTTaGCAAAGCTGCCCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFLESLI*QSCPQS
Trigger: TGACTGAGGGCAGCTTTGCAAAATGAGACTTTCTAA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCGAGTACAGTACAGGGTaGGGACAACAATCCCATATT +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFEYSTG*GQQSHI
Trigger: AATATGGGATTGTTGTCCCAACCCTGTACTGTACTC...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGAGTACAGTACAGGGTaGGGACAACAATCCCATATT +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCEYSTG*GQQSHI
Trigger: AATATGGGATTGTTGTCCCAACCCTGTACTGTACTC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTACAGTTCAGCTTGAGTaGTGGCTCTTGGAGAATGAG +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSATVQLE*WLLENE
Trigger: CTCATTCTCCAAGAGCCACAACTCAAGCTGAACTGT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCAGCTGCAGATTTTaGCTCGTCTTTAAGATGGGA +
Preference number: 5 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLLSCRF*LVFKMG
Trigger: TCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAG...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTCTCAGCTGCAGATTTTaGCTCGTCTTTAAGATGGGA +
Preference number: 5 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVLSCRF*LVFKMG
Trigger: TCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAG...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GCAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTTGGAAATATGGGTTaGAGTTCTGGCATTCCGCTA +
Preference number: 5 (lower is better)
Translates to: AGGRAGSISSTQLDKFIFFGNMG*SSGIPL
Trigger: TAGCGGAATGCCAGAACTCAAACCCATATTTCCAAA...AAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCCGGGACAGTCAGGTTaGGGAGACTCCGGATTTTGT +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFPGQSG*GDSGFC
Trigger: ACAAAATCCGGAGTCTCCCAAACCTGACTGTCCCGG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTGCTACTTCTTGGACCTaGGCTAGACTATCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPATSWT*ARLSED
Trigger: ATCTTCTGATAGTCTAGCCAAGGTCCAAGAAGTAGC...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCGCTACTTCTTGGACCTaGGCTAGACTATCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCATSWT*ARLSED
Trigger: ATCTTCTGATAGTCTAGCCAAGGTCCAAGAAGTAGC...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTTTCCAAAAGCCAGCTaGCTACTTCTTGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAFPKAS*LLLGPW
Trigger: CCAAGGTCCAAGAAGTAGCAAGCTGGCTTTTGGAAA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATGAACGGAGAAGATTATaGGAGGAGACTATGCCCTGT +
Preference number: 5 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNERRRL*EETMPC
Trigger: ACAGGGCATAGTCTCCTCCAATAATCTTCTCCGTTC...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS-3UTR CAA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTATACATACATGCAGCTaGACTGAGAAGAACTCGAGG +
Preference number: 5 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVIHTCS*TEKNSR
Trigger: CCTCGAGTTCTTCTCAGTCAAGCTGCATGTATGTAT...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393956.9
CDS TCA 90 bp GAAGCTTGGTTAGCTACCAGACAAACATCTTATTTTCTGGCTGTGTaGACGACAGCATTCCTTGGTGAGGATGTAGATAGTGCAACTTCA +
Preference number: 5 (lower is better)
Translates to: EAWLATRQTSYFLAV*TTAFLGEDVDSATS
Trigger: TGAAGTTGCACTATCTACATCCTCACCAAGGAATGCTGTCGTTCACACAGCCAGAAAATAAGATGTTTGTCTGGTAGCTAACCAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATCAAAAGTTGTTGGTGTaGCTGAACATGGTACAAGCC +
Preference number: 5 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNQKLLV*LNMVQA
Trigger: GGCTTGTACCATGTTCAGCAACACCAACAACTTTTG...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGCTTGTAGCAGGTCTTaGGGTTCCAGGAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQACSRS*GSRNES
Trigger: GCTTTCATTCCTGGAACCCAAAGACCTGCTACAAGC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATTCAATCCCCTCTTCTTaGCATTTCTCTCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNSIPSS*HFSLQR
Trigger: TCTCTGGAGAGAGAAATGCAAAGAAGAGGGGATTGA...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTAATGTTCTCAGACATTaGCCTGTGACTGCTGACCAA +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSANVLRH*PVTADQ
Trigger: TTGGTCAGCAGTCACAGGCAAATGTCTGAGAACATT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTTCTGCATTCCACACTTaGAGTGTCCGATCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSASAFHT*SVRSVD
Trigger: ATCTACAGATCGGACACTCAAAGTGTGGAATGCAGA...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTCTGCATTCCACACTTaGAGTGTCCGATCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQSAFHT*SVRSVD
Trigger: ATCTACAGATCGGACACTCAAAGTGTGGAATGCAGA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTTAGAAAGTCTCATTTaGCAAAGCTGCCCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLLESLI*QSCPQS
Trigger: TGACTGAGGGCAGCTTTGCAAAATGAGACTTTCTAA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GTCAAAAGTGAAGCCTTTTATGTGATGAGACAGCAGACGCCTCTCTTGTCAGTTTTAGAAAGTCTCATTTaGCAAAGCTGCCCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: VKSEAFYVMRQQTPLLSVLESLI*QSCPQS
Trigger: TGACTGAGGGCAGCTTTGCAAAATGAGACTTTCTAA...AACTGACAAGAGAGGCGTCTGCTGTCTCATCACATAAAAGGCTTCACTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTTTAGAAAGTCTCATTTaGCAAAGCTGCCCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLESLI*QSCPQS
Trigger: TGACTGAGGGCAGCTTTGCAAAATGAGACTTTCTAA...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGACAACTTGCCACCTTaGAGCAACATATGCATTGAA +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSDNLPP*SNICIE
Trigger: TTCAATGCATATGTTGCTCAAAGGTGGCAAGTTGTC...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTGAGTACAGTACAGGGTaGGGACAACAATCCCATATT +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAEYSTG*GQQSHI
Trigger: AATATGGGATTGTTGTCCCAACCCTGTACTGTACTC...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGTTTGGAAATATGGGTTaGAGTTCTGGCATTCCGCTA +
Preference number: 5 (lower is better)
Translates to: GEGQGVYRLHNWTNSSFLFGNMG*SSGIPL
Trigger: TAGCGGAATGCCAGAACTCAAACCCATATTTCCAAA...CAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGAGTGTGCTCCTCCTCTaGTTGTCTGAGTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQSVLLL*LSELLL
Trigger: CAACAGCAACTCAGACAACAAGAGGAGGAGCACACT...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS GCA 90 bp TTAGGAGATTTGAGTTCTCCTCGCCTCCAGTTAGTATCAATTCTGTaGTGTCTGATGTATGCACTTTTCCATGGACTGTGTATGAAACCT +
Preference number: 5 (lower is better)
Translates to: LGDLSSPRLQLVSIL*CLMYALFHGLCMKP
Trigger: AGGTTTCATACACAGTCCATGGAAAAGTGCATACATCAGACAGCACAGAATTGATACTAACTGGAGGCGAGGAGAACTCAAATCTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604069.1
ENST00000647183.1
CDS-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGGTCCCCAAAAGTTGTaGGTGTTGCTGAACATGGTA +
Preference number: 5 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQGPQKL*VLLNMV
Trigger: TACCATGTTCAGCAACACCAACAACTTTTGGGGACC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGCTTGTAGCAGGTCTTaGGGTTCCAGGAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFACSRS*GSRNES
Trigger: GCTTTCATTCCTGGAACCCAAAGACCTGCTACAAGC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCCAGAGACAAGAATATaGTCTTTGAGTTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPPETRI*SLSSIP
Trigger: TGGAATGGAACTCAAAGACAATATTCTTGTCTCTGG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCAGAGACAAGAATATaGTCTTTGAGTTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFPETRI*SLSSIP
Trigger: TGGAATGGAACTCAAAGACAATATTCTTGTCTCTGG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCCCAGAGACAAGAATATaGTCTTTGAGTTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFPETRI*SLSSIP
Trigger: TGGAATGGAACTCAAAGACAATATTCTTGTCTCTGG...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGGACAACTTGCCACCTTaGAGCAACATATGCATTGAA +
Preference number: 5 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQDNLPP*SNICIE
Trigger: TTCAATGCATATGTTGCTCAAAGGTGGCAAGTTGTC...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAAACTAGAGCAAATTaGGAATTCAGTCTGGGACTA +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFQTRAN*EFSLGL
Trigger: TAGTCCCAGACTGAATTCCAAATTTGCTCTAGTTTG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCAAACTAGAGCAAATTaGGAATTCAGTCTGGGACTA +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPQTRAN*EFSLGL
Trigger: TAGTCCCAGACTGAATTCCAAATTTGCTCTAGTTTG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTAACAGGCTTGAAGTATaGATTTCTATGTCACACAGC +
Preference number: 5 (lower is better)
Translates to: GGRAGSISSTQLDKFIFSNRLEV*ISMSHS
Trigger: GCTGTGTGACATAGAAATCAATACTTCAAGCCTGTT...AGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTAACAGGCTTGAAGTATaGATTTCTATGTCACACAGC +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFNRLEV*ISMSHS
Trigger: GCTGTGTGACATAGAAATCAATACTTCAAGCCTGTT...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp ACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATAGTGCCAACAGGCTTGAAGTATaGATTTCTATGTCACACAGC +
Preference number: 5 (lower is better)
Translates to: TSLSCRFLLVFKMGDNSANRLEV*ISMSHS
Trigger: GCTGTGTGACATAGAAATCAATACTTCAAGCCTGTT...GGCACTATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp AGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCAACAGGCTTGAAGTATaGATTTCTATGTCACACAGC +
Preference number: 5 (lower is better)
Translates to: RGKGREYIVYTIGQIHLFNRLEV*ISMSHS
Trigger: GCTGTGTGACATAGAAATCAATACTTCAAGCCTGTT...GAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TACGTTCATCCATTCACCACAGCCCTCAAAAAGAAAAGTTTCTCCACAGAACAGTTTGGAAATATGGGTTaGAGTTCTGGCATTCCGCTA +
Preference number: 5 (lower is better)
Translates to: YVHPFTTALKKKSFSTEQFGNMG*SSGIPL
Trigger: TAGCGGAATGCCAGAACTCAAACCCATATTTCCAAA...CTGTTCTGTGGAGAAACTTTTCTTTTTGAGGGCTGTGGTGAATGGATGAACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCAACTTCACCATTCCTaGCAGTGTGCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFQLHHS*QCAPPL
Trigger: AAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTTG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTTGCTGGGAATCATTTaGGCCTCCAGGTCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFLLGII*ASRSRF
Trigger: GAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCTCATCCTCCTCATCTaGTTCACCAGCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQLILLI*FTSMFF
Trigger: GAAGAACATGCTGGTGAACAAGATGAGGAGGATGAG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS TCA 90 bp CCACTAACTATTCGGTTACCACAAAACTGTAAGCATGTGATCACATaGTCATCATGTCCTTTCAGCACCTTAGGAGATTTGAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PLTIRLPQNCKHVIT*SSCPFSTLGDLSSP
Trigger: AGGAGAACTCAAATCTCCTAAGGTGCTGAAAGGACATGATGATCATGTGATCACATGCTTACAGTTTTGTGGTAACCGAATAGTTAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604069.1
ENST00000647183.1
CDS CCA 90 bp AATCTATTATTGTTTTCTTCCAACTGTCCTTGCTGGGAATCATTTTaGCCTCCAGGTCTAGGTTCTACTCCAACAACTTCACCATTCCTT +
Preference number: 5 (lower is better)
Translates to: NLLLFSSNCPCWESF*PPGLGSTPTTSPFL
Trigger: AAGGAATGGTGAAGTTGTTGGAGTAGAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGAAAACAATAATAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGCAAGCCCAGTGGTACTaGTATATTCTGAGACTTTGC +
Preference number: 5 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQQAQWY*YILRLC
Trigger: GCAAAGTCTCAGAATATACAAGTACCACTGGGCTTG...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCCAGAGACAAGAATATaGTCTTTGAGTTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSAPETRI*SLSSIP
Trigger: TGGAATGGAACTCAAAGACAATATTCTTGTCTCTGG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
CDS-3UTR CAA 90 bp CAGGGGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTTGTCAGTTATGGTTaGTCATCTCTTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: QGEGQGVYRLHNWTNSSFLVSYG*SSLLLF
Trigger: GAAAAGAAGAAGAGATGACAAACCATAACTGACAAG...AAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTCTTGTCAGTTATGGTTaGTCATCTCTTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPLVSYG*SSLLLF
Trigger: GAAAAGAAGAAGAGATGACAAACCATAACTGACAAG...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TGCCTAACCAGTCTCAGCTGCAGATTTTTGCTCGTCTTTAAGATGGGAGATAATCAAACTAGAGCAAATTaGGAATTCAGTCTGGGACTA +
Preference number: 5 (lower is better)
Translates to: CLTSLSCRFLLVFKMGDNQTRAN*EFSLGL
Trigger: TAGTCCCAGACTGAATTCCAAATTTGCTCTAGTTTG...ATTATCTCCCATCTTAAAGACGAGCAAAAATCTGCAGCTGAGACTGGTTAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GACAGCAGACGCCTCTCTTGTCAGTTATGGTTTGTCATCTCTTCTTCTTTTCCTAGTTTTGTGGATTCTTaGAGGGAACCAGATTTCATA +
Preference number: 5 (lower is better)
Translates to: DSRRLSCQLWFVISSSFPSFVDS*REPDFI
Trigger: TATGAAATCTGGTTCCCTCAAAGAATCCACAAAACT...AGGAAAAGAAGAAGAGATGACAAACCATAACTGACAAGAGAGGCGTCTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCAGTTTTGTGGATTCTTaGAGGGAACCAGATTTCATA +
Preference number: 5 (lower is better)
Translates to: GKGREYIVYTIGQIHLFCSFVDS*REPDFI
Trigger: TATGAAATCTGGTTCCCTCAAAGAATCCACAAAACT...GCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGCTACTTCTTGGACCTaGGCTAGACTATCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQATSWT*ARLSED
Trigger: ATCTTCTGATAGTCTAGCCAAGGTCCAAGAAGTAGC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTTTCCAAAAGCCAGCTaGCTACTTCTTGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFFPKAS*LLLGPW
Trigger: CCAAGGTCCAAGAAGTAGCAAGCTGGCTTTTGGAAA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS GCA 90 bp TCATCTACCGAAATAAATCTATTATTGTTTTCTTCCAACTGTCCTTaGTGGGAATCATTTTGGCCTCCAGGTCTAGGTTCTACTCCAACA +
Preference number: 5 (lower is better)
Translates to: SSTEINLLLFSSNCP*WESFWPPGLGSTPT
Trigger: TGTTGGAGTAGAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGAAAACAATAATAGATTTATTTCGGTAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS CCA 90 bp GACAGTAGAGTGCTTTATGCAGAAAGGATCTATTTCCACTTTGAATaGGGATGGAATCACAATTACATGGTCCATCAACTTTCAGCTATC +
Preference number: 5 (lower is better)
Translates to: DSRVLYAERIYFHFE*GWNHNYMVHQLSAI
Trigger: GATAGCTGAAAGTTGATGGACCATGTAATTGTGATTCCATCCCCATTCAAAGTGGAAATAGATCCTTTCTGCATAAAGCACTCTACTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 90 bp CGGTTTAGTCAACTTTACTTCTTTATGACTACAAATCAGTGGGCCTaGGACAGTAGAGTGCTTTATGCAGAAAGGATCTATTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: RFSQLYFFMTTNQWA*DSRVLYAERIYFHF
Trigger: AAAGTGGAAATAGATCCTTTCTGCATAAAGCACTCTACTGTCCCAGGCCCACTGATTTGTAGTCATAAAGAAGTAAAGTTGACTAAACCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTCTTGTCAGTTATGGTTaGTCATCTCTTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSALVSYG*SSLLLF
Trigger: GAAAAGAAGAAGAGATGACAAACCATAACTGACAAG...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GCTTATTTCCCTCTCAAACCTTGCTTTAGTCTGTCAAACTTTCTTAAAGAGCAGGACAACTTGCCACCTTaGAGCAACATATGCATTGAA +
Preference number: 5 (lower is better)
Translates to: AYFPLKPCFSLSNFLKEQDNLPP*SNICIE
Trigger: TTCAATGCATATGTTGCTCAAAGGTGGCAAGTTGTC...CTGCTCTTTAAGAAAGTTTGACAGACTAAAGCAAGGTTTGAGAGGGAAATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGAGTACAGTACAGGGTaGGGACAACAATCCCATATT +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFEYSTG*GQQSHI
Trigger: AATATGGGATTGTTGTCCCAACCCTGTACTGTACTC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp GGAAGGGCAGGGAGTATATCGTCTACACAATTGGACAAATTCATCTTTTCTGCTAGTTTTGTGGATTCTTaGAGGGAACCAGATTTCATA +
Preference number: 5 (lower is better)
Translates to: GRAGSISSTQLDKFIFSASFVDS*REPDFI
Trigger: TATGAAATCTGGTTCCCTCAAAGAATCCACAAAACT...AGCAGAAAAGATGAATTTGTCCAATTGTGTAGACGATATACTCCCTGCCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS GCA 90 bp AATTGCAACTGGGTTTCTTCCATGGGAATAGATTCAATGAAAGTATaGCAACAGTATTGGGTGTGGCTACATACCACATTTCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: NCNWVSSMGIDSMKV*QQYWVWLHTTFHLN
Trigger: ATTCAGATGAAATGTGGTATGTAGCCACACCCAATACTGTTGGCATACTTTCATTGAATCTATTCCCATGGAAGAAACCCAGTTGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 90 bp AGAGTGCTTTATGCAGAAAGGATCTATTTCCACTTTGAATGGGGATaGAATCACAATTACATGGTCCATCAACTTTCAGCTATCAAAGCA +
Preference number: 5 (lower is better)
Translates to: RVLYAERIYFHFEWG*NHNYMVHQLSAIKA
Trigger: TGCTTTGATAGCTGAAAGTTGATGGACCATGTAATTGTGATTCCATCCCCATTCAAAGTGGAAATAGATCCTTTCTGCATAAAGCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 90 bp AGAAATCGGTTTAGTCAACTTTACTTCTTTATGACTACAAATCAGTaGGCCTGGGACAGTAGAGTGCTTTATGCAGAAAGGATCTATTTC +
Preference number: 5 (lower is better)
Translates to: RNRFSQLYFFMTTNQ*AWDSRVLYAERIYF
Trigger: GAAATAGATCCTTTCTGCATAAAGCACTCTACTGTCCCAGGCCCACTGATTTGTAGTCATAAAGAAGTAAAGTTGACTAAACCGATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCGACAACTTGCCACCTTaGAGCAACATATGCATTGAA +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFDNLPP*SNICIE
Trigger: TTCAATGCATATGTTGCTCAAAGGTGGCAAGTTGTC...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCTTTGGAAATATGGGTTaGAGTTCTGGCATTCCGCTA +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFFGNMG*SSGIPL
Trigger: TAGCGGAATGCCAGAACTCAAACCCATATTTCCAAA...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS-3UTR CAA 90 bp TTGAACAAAACGGCTACAGAACAGTCAGAAAGTACCAGAAAAATGGCTTATTTCCCAGAGACAAGAATATaGTCTTTGAGTTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: LNKTATEQSESTRKMAYFPETRI*SLSSIP
Trigger: TGGAATGGAACTCAAAGACAATATTCTTGTCTCTGG...GAAATAAGCCATTTTTCTGGTACTTTCTGACTGTTCTGTAGCCGTTTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
CDS TCA 90 bp TTTCAAAAGTATGCCCACAAGCTTCTTTACAGATACTTTTGGCCATaGTACAAAGCCAGTATATCACTAAATGCCAACTGTGGTTATCTT +
Preference number: 5 (lower is better)
Translates to: FQKYAHKLLYRYFWP*YKASISLNANCGYL
Trigger: AAGATAACCACAGTTGGCATTTAGTGATATACTGGCTTTGTATCATGGCCAAAAGTATCTGTAAAGAAGCTTGTGGGCATACTTTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS TCA 90 bp GTAATTACAAAGTTCTTGTTGAACTGTAAACAGGTCACAGCACTCTaGTGCTTGTTGGGACCTAGACAAAAACCAAAAGAATTTAATTAC +
Preference number: 5 (lower is better)
Translates to: VITKFLLNCKQVTAL*CLLGPRQKPKEFNY
Trigger: GTAATTAAATTCTTTTGGTTTTTGTCTAGGTCCCAACAAGCATCAGAGTGCTGTGACCTGTTTACAGTTCAACAAGAACTTTGTAATTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS GCA 72 bp GGCGGCGGCCAGTGCAGGGGGACTGGATCTCTCGGATaGTCCTTCGCTCTCAGTCTCAGCGGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: GGGQCRGTGSLG*SFALSLSGGGG
Trigger: GCCGCCGCCGCCGCTGAGACTGAGAGCGAAGGAGCATCCGAGAGATCCAGTCCCCCTGCACTGGCCGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS GCA 72 bp GGCCCAGGTGAGAGCGAAGGTCTCGGCGGCGGCCAGTaGAGGGGGACTGGATCTCTCGGATGCTCCTTCGCT +
Preference number: 6 (lower is better)
Translates to: GPGESEGLGGGQ*RGTGSLGCSFA
Trigger: AGCGAAGGAGCATCCGAGAGATCCAGTCCCCCTGCACTGGCCGCCGCCGAGACCTTCGCTCTCACCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS CCA 72 bp GAGCGAAGGTCTCGGCGGCGGCCAGTGCAGGGGGACTaGATCTCTCGGATGCTCCTTCGCTCTCAGTCTCAG +
Preference number: 6 (lower is better)
Translates to: ERRSRRRPVQGD*ISRMLLRSQSQ
Trigger: CTGAGACTGAGAGCGAAGGAGCATCCGAGAGATCCAGTCCCCCTGCACTGGCCGCCGCCGAGACCTTCGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS TCA 72 bp CCGAGAAAGTGGGTTGGTTCCCTTCCTCCTTCGGACTaGAGCGGCAGCTGCGGAAGGCTCCGGCGCGGTACT +
Preference number: 6 (lower is better)
Translates to: PRKWVGSLPPSD*SGSCGRLRRGT
Trigger: AGTACCGCGCCGGAGCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000604095.1
ENST00000604872.6
ENST00000647166.1
CDS CCA 72 bp GAAGGCTCCGGCGCGGTACTCCTCTTTTCCTCTTCCTaGGTCTTTTCAGGCTGCGGCTTCTGCCCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: EGSGAVLLFSSS*VFSGCGFCPSR
Trigger: CCTGGACGGGCAGAAGCCGCAGCCTGAAAAGACCCAGGAAGAGGAAAAGAGGAGTACCGCGCCGGAGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281708.10
ENST00000604095.1
ENST00000604872.6
ENST00000647166.1
CDS GCA 72 bp TTTTCCTCTTCCTGGGTCTTTTCAGGCTGCGGCTTCTaGCCGTCCAGGGCCACTTCTCCCGGGACAGTCAGG +
Preference number: 6 (lower is better)
Translates to: FSSSWVFSGCGF*PSRATSPGTVR
Trigger: CCTGACTGTCCCGGGAGAAGTGGCCCTGGACGGGCAGAAGCCGCAGCCTGAAAAGACCCAGGAAGAGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000604095.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CAA 72 bp GCCTGTAGGTGGCTGGACAGATGTAATTCGGCGTCGTaGTTGCCCTTGGCCATTGGCTGCTCTGAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: ACRWLDRCNSAS*LPLAIGCSEVP
Trigger: GGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGCCGAATTACATCTGTCCAGCCACCTACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604822.1
ENST00000647183.1
CDS CAA 90 bp AGCAAGACCACTTTTAGAAAAGAGCCGCGGCGCCGAGAAAGTGGGTaGGTTCCCTTCCTCCTTCGGACTGAAGCGGCAGCTGCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: SKTTFRKEPRRRESG*VPFLLRTEAAAAEG
Trigger: GCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGCTCTTTTCTAAAAGTGGTCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647166.1
CDS CAA 90 bp GCTTTCACAACTTTTAGAAAAGAGCCGCGGCGCCGAGAAAGTGGGTaGGTTCCCTTCCTCCTTCGGACTGAAGCGGCAGCTGCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: AFTTFRKEPRRRESG*VPFLLRTEAAAAEG
Trigger: GCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGCTCTTTTCTAAAAGTTGTGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS CCA 72 bp CTTTTAGAAAAGAGCCGCGGCGCCGAGAAAGTGGGTTaGTTCCCTTCCTCCTTCGGACTGAAGCGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LLEKSRGAEKVG*FPSSFGLKRQL
Trigger: CAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGCTCTTTTCTAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000604095.1
ENST00000604872.6
ENST00000647166.1
CDS CAA 90 bp GCGGCTTCTGCCCGTCCAGGGCCACTTCTCCCGGGACAGTCAGGTTaGGGAGACTCCGGATTTTGTTTTTGTAAAGTTTCCTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: AASARPGPLLPGQSG*GDSGFCFCKVSSGW
Trigger: CCACCCAGAGGAAACTTTACAAAAACAAAATCCGGAGTCTCCCAAACCTGACTGTCCCGGGAGAAGTGGCCCTGGACGGGCAGAAGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS CAA 90 bp GAAGTAATCACTTTTAGAAAAGAGCCGCGGCGCCGAGAAAGTGGGTaGGTTCCCTTCCTCCTTCGGACTGAAGCGGCAGCTGCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: EVITFRKEPRRRESG*VPFLLRTEAAAAEG
Trigger: GCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGCTCTTTTCTAAAAGTGATTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000604872.6
CDS TCA 72 bp ATTCCGACTCCCAACTGCACACACCAGCTTTGTGTTTaGGGCTCTGATCCGCCACACAACTCCCCCACTCCC +
Preference number: 6 (lower is better)
Translates to: IPTPNCTHQLCV*GSDPPHNSPTP
Trigger: GGGAGTGGGGGAGTTGTGTGGCGGATCAGAGCCTCAAACACAAAGCTGGTGTGTGCAGTTGGGAGTCGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000604316.1
ENST00000647183.1
CDS CAA 90 bp TTCCTGGAGGCCTGTAGGTGGCTGGACAGATGTAATTCGGCGTCGTaGTTGCCCTTGGCCATTGGCTGCTCTGAGGTCCCCAAAAGTTGT +
Preference number: 6 (lower is better)
Translates to: FLEACRWLDRCNSAS*LPLAIGCSEVPKSC
Trigger: ACAACTTTTGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGCCGAATTACATCTGTCCAGCCACCTACAGGCCTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604822.1
ENST00000647183.1
CDS CAA 90 bp TTTCACATTACTTTTAGAAAAGAGCCGCGGCGCCGAGAAAGTGGGTaGGTTCCCTTCCTCCTTCGGACTGAAGCGGCAGCTGCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: FHITFRKEPRRRESG*VPFLLRTEAAAAEG
Trigger: GCCTTCCGCAGCTGCCGCTTCAGTCCGAAGGAGGAAGGGAACCAACCCACTTTCTCGGCGCCGCGGCTCTTTTCTAAAAGTAATGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603548.6
CDS GCA 72 bp GTAGGTGGCTGGACAGATGTAATTCGGCGTCGTTGTTaGCCTTGGCCATTGGCTGCTCTGAGGTCCCCAAAA +
Preference number: 6 (lower is better)
Translates to: VGGWTDVIRRRC*PWPLAALRSPK
Trigger: TTTTGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGCCGAATTACATCTGTCCAGCCACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604822.1
ENST00000647183.1
CDS CAA 72 bp TGTAGGTGGCTGGACAGATGTAATTCGGCGTCGTTGTaGCCCTTGGCCATTGGCTGCTCTGAGGTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: CRWLDRCNSASL*PLAIGCSEVPK
Trigger: TTTGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGCCGAATTACATCTGTCCAGCCACCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604822.1
ENST00000647183.1
CDS TCA 72 bp TTCGGCGTCGTTGTTGCCCTTGGCCATTGGCTGCTCTaGGGTCCCCAAAAGTTGTTGGTGTTGCTGAACATG +
Preference number: 6 (lower is better)
Translates to: FGVVVALGHWLL*GPQKLLVLLNM
Trigger: CATGTTCAGCAACACCAACAACTTTTGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604822.1
ENST00000647183.1
CDS CAA 72 bp TGGCTGGACAGATGTAATTCGGCGTCGTTGTTGCCCTaGGCCATTGGCTGCTCTGAGGTCCCCAAAAGTTGT +
Preference number: 6 (lower is better)
Translates to: WLDRCNSASLLP*AIGCSEVPKSC
Trigger: ACAACTTTTGGGGACCTCAGAGCAGCCAATGGCCAAGGGCAACAACGACGCCGAATTACATCTGTCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604822.1
ENST00000647183.1
CDS CAA 72 bp GCCCGTCCAGGGCCACTTCTCCCGGGACAGTCAGGTTaGGGAGACTCCGGATTTTGTTTTTGTAAAGTTTCC +
Preference number: 6 (lower is better)
Translates to: ARPGPLLPGQSG*GDSGFCFCKVS
Trigger: GGAAACTTTACAAAAACAAAATCCGGAGTCTCCCAAACCTGACTGTCCCGGGAGAAGTGGCCCTGGACGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CCA 72 bp CCCGTCCAGGGCCACTTCTCCCGGGACAGTCAGGTTTaGGAGACTCCGGATTTTGTTTTTGTAAAGTTTCCT +
Preference number: 6 (lower is better)
Translates to: PVQGHFSRDSQV*ETPDFVFVKFP
Trigger: AGGAAACTTTACAAAAACAAAATCCGGAGTCTCCCAAACCTGACTGTCCCGGGAGAAGTGGCCCTGGACGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281708.10
ENST00000603548.6
CDS TCA 72 bp CACCATTCCTTGCAGTGTGCTCCTCCTCTTGTTGTCTaGGTTGCTGTTGCTGTTCCTCCTCTACCACACGAT +
Preference number: 6 (lower is better)
Translates to: HHSLQCAPPLVV*VAVAVPPLPHD
Trigger: ATCGTGTGGTAGAGGAGGAACAGCAACAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAATGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS TCA 72 bp TACCACACGATTCATCTGTTCTTCATCTACCTGGCTTaGGGAAGGGTTACCTCTCAGAGAGCCTCCAGTTCG +
Preference number: 6 (lower is better)
Translates to: YHTIHLFFIYLA*GRVTSQRASSS
Trigger: CGAACTGGAGGCTCTCTGAGAGGTAACCCTTCCTCAAGCCAGGTAGATGAAGAACAGATGAATCGTGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CAA 72 bp AACTTCACCATTCCTTGCAGTGTGCTCCTCCTCTTGTaGTCTGAGTTGCTGTTGCTGTTCCTCCTCTACCAC +
Preference number: 6 (lower is better)
Translates to: NFTIPCSVLLLL*SELLLLFLLYH
Trigger: GTGGTAGAGGAGGAACAGCAACAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CAA 72 bp CTGGTCCATCTCCTCCTCCTCCTCATCCTCCTCATCTaGTTCACCAGCATGTTCTTCATCTTCCTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: LVHLLLLLILLI*FTSMFFIFLLF
Trigger: GAACAAGAGGAAGATGAAGAACATGCTGGTGAACAAGATGAGGAGGATGAGGAGGAGGAGGAGATGGACCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS CAA 90 bp TCGGCCTATGGGCCAATTGGAGCACGGCAACATTCATTCACTTCCTaGTTGTCTACAGCTGCTTTCACAACTTTTAGAAAAGAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: SAYGPIGARQHSFTS*LSTAAFTTFRKEPR
Trigger: CCGCGGCTCTTTTCTAAAAGTTGTGAAAGCAGCTGTAGACAACAAGGAAGTGAATGAATGTTGCCGTGCTCCAATTGGCCCATAGGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS GCA 72 bp CACTTGTTAACGACTGGTGCCCTGTTAACGTGTGAATaGAATTCCCTGTCTCCACATCCCAAACACGGATTG +
Preference number: 6 (lower is better)
Translates to: HLLTTGALLTCE*NSLSPHPKHGL
Trigger: CAATCCGTGTTTGGGATGTGGAGACAGGGAATTGCATTCACACGTTAACAGGGCACCAGTCGTTAACAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000604316.1
ENST00000647183.1
CDS GCA 72 bp TACCTCTCAGAGAGCCTCCAGTTCGTCGTCTTTTGCTaGCCACAGAGAGCAGTTCCTGATTCATTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: YLSESLQFVVFC*PQRAVPDSFPK
Trigger: TTTTGGAAATGAATCAGGAACTGCTCTCTGTGGGCAGCAAAAGACGACGAACTGGAGGCTCTCTGAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS GCA 72 bp AGGTCTAGGTTCTACTCCAACAACTTCACCATTCCTTaGAGTGTGCTCCTCCTCTTGTTGTCTGAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: RSRFYSNNFTIP*SVLLLLLSELL
Trigger: CAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTTGTTGGAGTAGAACCTAGACCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CCA 72 bp AGTAGCGACATGTCTGAGCTGCTTGTAGCAGGTCTTTaGGTTCCAGGAATGAAAGCACATAGAGTGCCAACT +
Preference number: 6 (lower is better)
Translates to: SSDMSELLVAGL*VPGMKAHRVPT
Trigger: AGTTGGCACTCTATGTGCTTTCATTCCTGGAACCCAAAGACCTGCTACAAGCAGCTCAGACATGTCGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604069.1
ENST00000647183.1
CDS CCA 72 bp TACCAGGAGTCCAAAAACTTCGGCCTATGGGCCAATTaGAGCACGGCAACATTCATTCACTTCCTTGTTGTC +
Preference number: 6 (lower is better)
Translates to: YQESKNFGLWAN*STATFIHFLVV
Trigger: GACAACAAGGAAGTGAATGAATGTTGCCGTGCTCCAATTGGCCCATAGGCCGAAGTTTTTGGACTCCTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS CAA 72 bp ATTCCTTGCAGTGTGCTCCTCCTCTTGTTGTCTGAGTaGCTGTTGCTGTTCCTCCTCTACCACACGATTCAT +
Preference number: 6 (lower is better)
Translates to: IPCSVLLLLLSE*LLLFLLYHTIH
Trigger: ATGAATCGTGTGGTAGAGGAGGAACAGCAACAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CAA 90 bp TGCTGCCCACAGAGAGCAGTTCCTGATTCATTTCCAAAAGCCAGCTaGCTACTTCTTGGACCTTGGCTAGACTATCAGAAGATGCAAAGG +
Preference number: 6 (lower is better)
Translates to: CCPQRAVPDSFPKAS*LLLGPWLDYQKMQR
Trigger: CCTTTGCATCTTCTGATAGTCTAGCCAAGGTCCAAGAAGTAGCAAGCTGGCTTTTGGAAATGAATCAGGAACTGCTCTCTGTGGGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CAA 90 bp AACTTCACCATTCCTTGCAGTGTGCTCCTCCTCTTGTTGTCTGAGTaGCTGTTGCTGTTCCTCCTCTACCACACGATTCATCTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: NFTIPCSVLLLLLSE*LLLFLLYHTIHLFF
Trigger: GAAGAACAGATGAATCGTGTGGTAGAGGAGGAACAGCAACAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CAA 90 bp TACTCCAACAACTTCACCATTCCTTGCAGTGTGCTCCTCCTCTTGTaGTCTGAGTTGCTGTTGCTGTTCCTCCTCTACCACACGATTCAT +
Preference number: 6 (lower is better)
Translates to: YSNNFTIPCSVLLLL*SELLLLFLLYHTIH
Trigger: ATGAATCGTGTGGTAGAGGAGGAACAGCAACAGCAACTCAGACAACAAGAGGAGGAGCACACTGCAAGGAATGGTGAAGTTGTTGGAGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
ENST00000642901.1
ENST00000643834.1
ENST00000647166.1
CDS CAA 72 bp ATCATATGCTCCACTAACAACCCTCCTGCCATCATATaGAACACAGCGGACTGCTGCAACATGACCCATCAA +
Preference number: 6 (lower is better)
Translates to: IICSTNNPPAII*NTADCCNMTHQ
Trigger: TTGATGGGTCATGTTGCAGCAGTCCGCTGTGTTCAATATGATGGCAGGAGGGTTGTTAGTGGAGCATATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000647183.1
CDS CAA 72 bp ATACCAGGAGTCCAAAAACTTCGGCCTATGGGCCAATaGGAGCACGGCAACATTCATTCACTTCCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: IPGVQKLRPMGQ*EHGNIHSLPCC
Trigger: ACAACAAGGAAGTGAATGAATGTTGCCGTGCTCCAATTGGCCCATAGGCCGAAGTTTTTGGACTCCTGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS CAA 72 bp GAATGCAATTCCCTGTCTCCACATCCCAAACACGGATaGATGTATCAAGAGATCCACTCACCACATGGATAC +
Preference number: 6 (lower is better)
Translates to: ECNSLSPHPKHG*MYQEIHSPHGY
Trigger: GTATCCATGTGGTGAGTGGATCTCTTGATACATCAATCCGTGTTTGGGATGTGGAGACAGGGAATTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000604316.1
ENST00000647183.1
CDS CAA 90 bp GGTTTCTTCCATGGGAATAGATTCAATGAAAGTATGCCAACAGTATaGGGTGTGGCTACATACCACATTTCATCTGAATCTGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GFFHGNRFNESMPTV*GVATYHISSESAPG
Trigger: CCCTGGGGCAGATTCAGATGAAATGTGGTATGTAGCCACACCCAATACTGTTGGCATACTTTCATTGAATCTATTCCCATGGAAGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS TCA 72 bp TGTGTATGTTCATCTTCTCTGCTACTATCATCAGACTaGTCAAAATCGTCACTCTCCTGGTCCATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: CVCSSSLLLSSD*SKSSLSWSISS
Trigger: GGAGGAGATGGACCAGGAGAGTGACGATTTTGATCAGTCTGATGATAGTAGCAGAGAAGATGAACATACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS GCA 72 bp TTGAGTTCTCCTCGCCTCCAGTTAGTATCAATTCTGTaGTGTCTGATGTATGCACTTTTCCATGGACTGTGT +
Preference number: 6 (lower is better)
Translates to: LSSPRLQLVSIL*CLMYALFHGLC
Trigger: ACACAGTCCATGGAAAAGTGCATACATCAGACAGCACAGAATTGATACTAACTGGAGGCGAGGAGAACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604069.1
ENST00000647183.1
CDS CCA 72 bp TTGTTTTCTTCCAACTGTCCTTGCTGGGAATCATTTTaGCCTCCAGGTCTAGGTTCTACTCCAACAACTTCA +
Preference number: 6 (lower is better)
Translates to: LFSSNCPCWESF*PPGLGSTPTTS
Trigger: TGAAGTTGTTGGAGTAGAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS CAA 72 bp ATTGTTTTCTTCCAACTGTCCTTGCTGGGAATCATTTaGGCCTCCAGGTCTAGGTTCTACTCCAACAACTTC +
Preference number: 6 (lower is better)
Translates to: IVFFQLSLLGII*ASRSRFYSNNF
Trigger: GAAGTTGTTGGAGTAGAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGAAAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS CAA 90 bp TTCCACACTTTGAGTGTCCGATCTGTAGATCCACTAATGATGATGTaGTCTCTCATTTGTGATGACCATACTCCACCTGTATGTCCCACT +
Preference number: 6 (lower is better)
Translates to: FHTLSVRSVDPLMMM*SLICDDHTPPVCPT
Trigger: AGTGGGACATACAGGTGGAGTATGGTCATCACAAATGAGAGACAACATCATCATTAGTGGATCTACAGATCGGACACTCAAAGTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000604069.1
ENST00000647183.1
CDS CAA 90 bp TTAACGTGTGAATGCAATTCCCTGTCTCCACATCCCAAACACGGATaGATGTATCAAGAGATCCACTCACCACATGGATACCATCAAACT +
Preference number: 6 (lower is better)
Translates to: LTCECNSLSPHPKHG*MYQEIHSPHGYHQT
Trigger: AGTTTGATGGTATCCATGTGGTGAGTGGATCTCTTGATACATCAATCCGTGTTTGGGATGTGGAGACAGGGAATTGCATTCACACGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000604316.1
ENST00000647183.1
CDS GCA 72 bp AGTCTCTGGATCCCACACCTTTACCATAAAATCATATaGTCCACTAACAACCCTCCTGCCATCATATTGAAC +
Preference number: 6 (lower is better)
Translates to: SLWIPHLYHKII*STNNPPAIILN
Trigger: GTTCAATATGATGGCAGGAGGGTTGTTAGTGGAGCATATGATTTTATGGTAAAGGTGTGGGATCCAGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000647183.1
CDS CAA 72 bp GGGCCAATTGGAGCACGGCAACATTCATTCACTTCCTaGTTGTCTACAGCTGCTTTCACAACTTTTAGAAAA +
Preference number: 6 (lower is better)
Translates to: GPIGARQHSFTS*LSTAAFTTFRK
Trigger: TTTTCTAAAAGTTGTGAAAGCAGCTGTAGACAACAAGGAAGTGAATGAATGTTGCCGTGCTCCAATTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS CAA 90 bp CCTGGGACAGTAGAGTGCTTTATGCAGAAAGGATCTATTTCCACTTaGAATGGGGATGGAATCACAATTACATGGTCCATCAACTTTCAG +
Preference number: 6 (lower is better)
Translates to: PGTVECFMQKGSIST*NGDGITITWSINFQ
Trigger: CTGAAAGTTGATGGACCATGTAATTGTGATTCCATCCCCATTCAAAGTGGAAATAGATCCTTTCTGCATAAAGCACTCTACTGTCCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS TCA 72 bp AAGTTCTTGTTGAACTGTAAACAGGTCACAGCACTCTaGTGCTTGTTGGGACCTTGCAATGTTTGTAAACAC +
Preference number: 6 (lower is better)
Translates to: KFLLNCKQVTAL*CLLGPCNVCKH
Trigger: GTGTTTACAAACATTGCAAGGTCCCAACAAGCATCAGAGTGCTGTGACCTGTTTACAGTTCAACAAGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604316.1
ENST00000647183.1
CDS TCA 72 bp TTAGCTACCAGACAAACATCTTATTTTCTGGCTGTGTaGACGACAGCATTCCTTGGTGAGGATGTAGATAGT +
Preference number: 6 (lower is better)
Translates to: LATRQTSYFLAV*TTAFLGEDVDS
Trigger: ACTATCTACATCCTCACCAAGGAATGCTGTCGTTCACACAGCCAGAAAATAAGATGTTTGTCTGGTAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 72 bp TTCTTTCCCAAAGAAAAAGAGCGGACCTCAGAACCATaGTCCAACTTTCTTTTCATCCGTCTTCGACAAAAA +
Preference number: 6 (lower is better)
Translates to: FFPKEKERTSEP*SNFLFIRLRQK
Trigger: TTTTTGTCGAAGACGGATGAAAAGAAAGTTGGACCATGGTTCTGAGGTCCGCTCTTTTTCTTTGGGAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS CCA 72 bp ATAGATTCAATGAAAGTATGCCAACAGTATTGGGTGTaGCTACATACCACATTTCATCTGAATCTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: IDSMKVCQQYWV*LHTTFHLNLPQ
Trigger: CTGGGGCAGATTCAGATGAAATGTGGTATGTAGCCACACCCAATACTGTTGGCATACTTTCATTGAATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 72 bp ATTTCCACTTTGAATGGGGATGGAATCACAATTACATaGTCCATCAACTTTCAGCTATCAAAGCAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: ISTLNGDGITIT*SINFQLSKQRG
Trigger: GCCCCTTTGCTTTGATAGCTGAAAGTTGATGGACCATGTAATTGTGATTCCATCCCCATTCAAAGTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CAA 72 bp CTTTCTTTTCATCCGTCTTCGACAAAAAGGGAGGCCTaGGGCAATGATGCTAATGCTAAATATCTTCATCAC +
Preference number: 6 (lower is better)
Translates to: LSFHPSSTKREA*GNDANAKYLHH
Trigger: GTGATGAAGATATTTAGCATTAGCATCATTGCCCAAGGCCTCCCTTTTTGTCGAAGACGGATGAAAAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS CAA 72 bp TTGAGTGTCCGATCTGTAGATCCACTAATGATGATGTaGTCTCTCATTTGTGATGACCATACTCCACCTGTA +
Preference number: 6 (lower is better)
Translates to: LSVRSVDPLMMM*SLICDDHTPPV
Trigger: TACAGGTGGAGTATGGTCATCACAAATGAGAGACAACATCATCATTAGTGGATCTACAGATCGGACACTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000604069.1
ENST00000647183.1
CDS CAA 72 bp CCAATTGGAGCACGGCAACATTCATTCACTTCCTTGTaGTCTACAGCTGCTTTCACAACTTTTAGAAAAGAG +
Preference number: 6 (lower is better)
Translates to: PIGARQHSFTSL*STAAFTTFRKE
Trigger: CTCTTTTCTAAAAGTTGTGAAAGCAGCTGTAGACAACAAGGAAGTGAATGAATGTTGCCGTGCTCCAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS CAA 72 bp AATAAAGCTCATACTGTTTGTTGGTGGATTTGGCAGTaGTCTATACCAGGAGTCCAAAAACTTCGGCCTATG +
Preference number: 6 (lower is better)
Translates to: NKAHTVCWWIWQ*SIPGVQKLRPM
Trigger: CATAGGCCGAAGTTTTTGGACTCCTGGTATAGACAACTGCCAAATCCACCAACAAACAGTATGAGCTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604095.1
CDS CAA 90 bp ATGGTCCAACTTTCTTTTCATCCGTCTTCGACAAAAAGGGAGGCCTaGGGCAATGATGCTAATGCTAAATATCTTCATCACAGTTTGATG +
Preference number: 6 (lower is better)
Translates to: MVQLSFHPSSTKREA*GNDANAKYLHHSLM
Trigger: CATCAAACTGTGATGAAGATATTTAGCATTAGCATCATTGCCCAAGGCCTCCCTTTTTGTCGAAGACGGATGAAAAGAAAGTTGGACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS CAA 90 bp AAATCTATTATTGTTTTCTTCCAACTGTCCTTGCTGGGAATCATTTaGGCCTCCAGGTCTAGGTTCTACTCCAACAACTTCACCATTCCT +
Preference number: 6 (lower is better)
Translates to: KSIIVFFQLSLLGII*ASRSRFYSNNFTIP
Trigger: AGGAATGGTGAAGTTGTTGGAGTAGAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGAAAACAATAATAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS CAA 90 bp CTCATCTACCGAAATAAATCTATTATTGTTTTCTTCCAACTGTCCTaGCTGGGAATCATTTTGGCCTCCAGGTCTAGGTTCTACTCCAAC +
Preference number: 6 (lower is better)
Translates to: LIYRNKSIIVFFQLS*LGIILASRSRFYSN
Trigger: GTTGGAGTAGAACCTAGACCTGGAGGCCAAAATGATTCCCAGCAAGGACAGTTGGAAGAAAACAATAATAGATTTATTTCGGTAGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS TCA 72 bp ATTCGGTTACCACAAAACTGTAAGCATGTGATCACATaGTCATCATGTCCTTTCAGCACCTTAGGAGATTTG +
Preference number: 6 (lower is better)
Translates to: IRLPQNCKHVIT*SSCPFSTLGDL
Trigger: CAAATCTCCTAAGGTGCTGAAAGGACATGATGATCATGTGATCACATGCTTACAGTTTTGTGGTAACCGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603841.1
ENST00000604069.1
ENST00000647183.1
CDS TCA 72 bp AAGTTCTTGTTGAACTGTAAACAGGTCACAGCACTCTaGTGCTTGTTGGGACCTAGACAAAAACCAAAAGAA +
Preference number: 6 (lower is better)
Translates to: KFLLNCKQVTAL*CLLGPRQKPKE
Trigger: TTCTTTTGGTTTTTGTCTAGGTCCCAACAAGCATCAGAGTGCTGTGACCTGTTTACAGTTCAACAAGAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 72 bp TTTCTTTTCATCCGTCTTCGACAAAAAGGGAGGCCTTaGGCAATGATGCTAATGCTAAATATCTTCATCACA +
Preference number: 6 (lower is better)
Translates to: FLFIRLRQKGRP*AMMLMLNIFIT
Trigger: TGTGATGAAGATATTTAGCATTAGCATCATTGCCCAAGGCCTCCCTTTTTGTCGAAGACGGATGAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296555.11
CDS CAA 72 bp GTAGAGTGCTTTATGCAGAAAGGATCTATTTCCACTTaGAATGGGGATGGAATCACAATTACATGGTCCATC +
Preference number: 6 (lower is better)
Translates to: VECFMQKGSIST*NGDGITITWSI
Trigger: GATGGACCATGTAATTGTGATTCCATCCCCATTCAAAGTGGAAATAGATCCTTTCTGCATAAAGCACTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS TCA 72 bp GGACTGTACTGGATCAGCAATTTGACAGTGATTATCTaGGTAAAACAACCTTATGATTCATCAGGAGAGCAT +
Preference number: 6 (lower is better)
Translates to: GLYWISNLTVII*VKQPYDSSGEH
Trigger: ATGCTCTCCTGATGAATCATAAGGTTGTTTTACTCAGATAATCACTGTCAAATTGCTGATCCAGTACAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 72 bp ATGGGAATAGATTCAATGAAAGTATGCCAACAGTATTaGGTGTGGCTACATACCACATTTCATCTGAATCTG +
Preference number: 6 (lower is better)
Translates to: MGIDSMKVCQQY*VWLHTTFHLNL
Trigger: CAGATTCAGATGAAATGTGGTATGTAGCCACACCCAATACTGTTGGCATACTTTCATTGAATCTATTCCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 72 bp TATGCAGAAAGGATCTATTTCCACTTTGAATGGGGATaGAATCACAATTACATGGTCCATCAACTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: YAERIYFHFEWG*NHNYMVHQLSA
Trigger: AGCTGAAAGTTGATGGACCATGTAATTGTGATTCCATCCCCATTCAAAGTGGAAATAGATCCTTTCTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CCA 72 bp GTGCTTTATGCAGAAAGGATCTATTTCCACTTTGAATaGGGATGGAATCACAATTACATGGTCCATCAACTT +
Preference number: 6 (lower is better)
Translates to: VLYAERIYFHFE*GWNHNYMVHQL
Trigger: AAGTTGATGGACCATGTAATTGTGATTCCATCCCCATTCAAAGTGGAAATAGATCCTTTCTGCATAAAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603821.1
CDS CAA 72 bp TTAACTGTAGAATCTGCATTCCCAGAGACAAGAATATaGTCTTTGAGTTCCATTCCACTTGTTAACGACTGG +
Preference number: 6 (lower is better)
Translates to: LTVESAFPETRI*SLSSIPLVNDW
Trigger: CCAGTCGTTAACAAGTGGAATGGAACTCAAAGACAATATTCTTGTCTCTGGGAATGCAGATTCTACAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281708.10
ENST00000296555.11
ENST00000393956.9
ENST00000603548.6
ENST00000603821.1
ENST00000603841.1
ENST00000604316.1
ENST00000647183.1
CDS CAA 72 bp CCTGAGGAGTCCTCATCTACCGAAATAAATCTATTATaGTTTTCTTCCAACTGTCCTTGCTGGGAATCATTT +
Preference number: 6 (lower is better)
Translates to: PEESSSTEINLL*FSSNCPCWESF
Trigger: AAATGATTCCCAGCAAGGACAGTTGGAAGAAAACAATAATAGATTTATTTCGGTAGATGAGGACTCCTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281708.10
ENST00000603548.6
ENST00000603841.1
ENST00000604872.6
ENST00000605042.1
CDS CAA 72 bp CATGGGAATAGATTCAATGAAAGTATGCCAACAGTATaGGGTGTGGCTACATACCACATTTCATCTGAATCT +
Preference number: 6 (lower is better)
Translates to: HGNRFNESMPTV*GVATYHISSES
Trigger: AGATTCAGATGAAATGTGGTATGTAGCCACACCCAATACTGTTGGCATACTTTCATTGAATCTATTCCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603821.1