RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXW5 (Homo sapiens)

Ensembl gene IDs: ENSG00000159069

Ensembl transcript IDs: ENST00000325285.8, ENST00000428398.5, ENST00000443788.1, ENST00000459905.5, ENST00000480818.3, ENST00000483559.5, ENST00000487794.5, ENST00000491246.4

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTaGGGAGCGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAG +
Preference number: 1 (lower is better)
Translates to: GARPWARCLEDAHGA*GAPGFDGGVVAGRE
Trigger: CTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR TCA 90 bp ACCACAGAGGTCCGTGGGCACTGCCTGCTCCGGGGGCCCCAGACCTaGATCAGGCCCGTCGGTTGCTTGCTGGCCAGCGGCCCTGCCTGC +
Preference number: 1 (lower is better)
Translates to: TTEVRGHCLLRGPQT*IRPVGCLLASGPAC
Trigger: GCAGGCAGGGCCGCTGGCCAGCAAGCAACCGACGGGCCTGATTCAGGTCTGGGGCCCCCGGAGCAGGCAGTGCCCACGGACCTCTGTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 90 bp CCGCGATTGGTGGCGGCTGCATGGGGTCGGCCACCACCGCACCGTTaGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCG +
Preference number: 1 (lower is better)
Translates to: PRLVAAAWGRPPPHR*ARRGCSRTGTCCRA
Trigger: CGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 90 bp TCAGCGCCTCTGGCTGGCAAGCCAGGAGAAGAAGGTGCGAGGCCGTaGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGAGCGCCA +
Preference number: 1 (lower is better)
Translates to: SAPLAGKPGEEGARP*ARCLEDAHGAWGAP
Trigger: TGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 90 bp AGGTCGAACACCAGCAGGTCAATCTCCTCCGCGATTGGTGGCGGCTaGATGGGGTCGGCCACCACCGCACCGTTGGGCCAGGCGCGGCTG +
Preference number: 1 (lower is better)
Translates to: RSNTSRSISSAIGGG*MGSATTAPLGQARL
Trigger: CAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGCGGAGGAGATTGACCTGCTGGTGTTCGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 90 bp CCAGCACACCTCAGCGCCTCTGGCTGGCAAGCCAGGAGAAGAAGGTaGGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTG +
Preference number: 1 (lower is better)
Translates to: PAHLSASGWQARRRR*EAVGEVPGGRAWCV
Trigger: CACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 90 bp GTCCCGGTGGCTCCAGTGCACCCAGCACACCTCAGCGCCTCTGGCTaGCAAGCCAGGAGAAGAAGGTGCGAGGCCGTGGGCGAGGTGCCT +
Preference number: 1 (lower is better)
Translates to: VPVAPVHPAHLSASG*QARRRRCEAVGEVP
Trigger: AGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGGGTGCACTGGAGCCACCGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 90 bp CTGGCTGGCAAGCCAGGAGAAGAAGGTGCGAGGCCGTGGGCGAGGTaGCTGGAGGACGCGCATGGTGCGTGGGGAGCGCCAGGCTTTGAT +
Preference number: 1 (lower is better)
Translates to: LAGKPGEEGARPWAR*LEDAHGAWGAPGFD
Trigger: ATCAAAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 90 bp CGAACACCAGCAGGTCAATCTCCTCCGCGATTGGTGGCGGCTGCATaGGGTCGGCCACCACCGCACCGTTGGGCCAGGCGCGGCTGTTCA +
Preference number: 1 (lower is better)
Translates to: RTPAGQSPPRLVAAA*GRPPPHRWARRGCS
Trigger: TGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGCGGAGGAGATTGACCTGCTGGTGTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 90 bp CTGGCAAGCCAGGAGAAGAAGGTGCGAGGCCGTGGGCGAGGTGCCTaGAGGACGCGCATGGTGCGTGGGGAGCGCCAGGCTTTGATGGTG +
Preference number: 1 (lower is better)
Translates to: LASQEKKVRGRGRGA*RTRMVRGERQALMV
Trigger: CACCATCAAAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR TCA 90 bp AGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTTaGGGTCGAACACCAGCAGGTCAATCTCCTCCGCGATTGGTGGCG +
Preference number: 1 (lower is better)
Translates to: RRGAHAEPASPPAWS*GRTPAGQSPPRLVA
Trigger: CGCCACCAATCGCGGAGGAGATTGACCTGCTGGTGTTCGACCTCAAGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR TCA 90 bp GGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTaGGCAGGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCC +
Preference number: 1 (lower is better)
Translates to: GSICTGHPVPSITAA*AGLCVSVWRGLVVP
Trigger: GGGGACAACCAGGCCCCGCCACACGCTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR GCA 90 bp GTCGAAGAAGGCATCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTaGCGTGGTCATCTGGTGTGGCAGGATCTGCTTGATGCCTCAGTG +
Preference number: 1 (lower is better)
Translates to: VEEGIGAPALTQHGP*RGHLVWQDLLDASV
Trigger: CACTGAGGCATCAAGCAGATCCTGCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGATGCCTTCTTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 90 bp GGCGACAGGCCCATGCCGATGATGTGTCCGTGTATGTCTATGACGTaGTCCAGCGCGTCGAAGAAGGCATCGGAGCCCCGGCCCTCACCC +
Preference number: 1 (lower is better)
Translates to: GDRPMPMMCPCMSMT*SSASKKASEPRPSP
Trigger: GGGTGAGGGCCGGGGCTCCGATGCCTTCTTCGACGCGCTGGACCACGTCATAGACATACACGGACACATCATCGGCATGGGCCTGTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 90 bp CATGGTCTTGAGGTCGAACACCAGCAGGTCAATCTCCTCCGCGATTaGTGGCGGCTGCATGGGGTCGGCCACCACCGCACCGTTGGGCCA +
Preference number: 1 (lower is better)
Translates to: HGLEVEHQQVNLLRD*WRLHGVGHHRTVGP
Trigger: TGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGCGGAGGAGATTGACCTGCTGGTGTTCGACCTCAAGACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 90 bp CTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTaGGTGAGCAGGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGT +
Preference number: 1 (lower is better)
Translates to: LGLHLHWPPRAKHHS*VSRFVCERVAGPGC
Trigger: ACAACCAGGCCCCGCCACACGCTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR CCA 90 bp TTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCCTaGGGACTGAAGACCACTGAGTTGACCACATCCTCGTGCCGCAGC +
Preference number: 1 (lower is better)
Translates to: LMVASSLAVSSSSCS*GLKTTELTTSSCRS
Trigger: GCTGCGGCACGAGGATGTGGTCAACTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCCACCATCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 90 bp CAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTaGTCCTGGGGACTGAAGACCACTGAGTTGACCACATCCTCGTGC +
Preference number: 1 (lower is better)
Translates to: QALMVASSLAVSSSS*SWGLKTTELTTSSC
Trigger: GCACGAGGATGTGGTCAACTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 90 bp AAGGAGTCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTTGTaGGGCCCCAGGAACACCCCCGAGGCCAGCAGTAGCGAGTCGTCC +
Preference number: 1 (lower is better)
Translates to: KESRLMTAISPDEEL*GPRNTPEASSSESS
Trigger: GGACGACTCGCTACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGACTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR TCA 90 bp GCCCCAGGAACACCCCCGAGGCCAGCAGTAGCGAGTCGTCCTTGTTaGACTGGGAGAACTGGGTGTAGCTCCAGTTGTAGGGCCGCATGT +
Preference number: 1 (lower is better)
Translates to: APGTPPRPAVASRPC*TGRTGCSSSCRAAC
Trigger: ACATGCGGCCCTACAACTGGAGCTACACCCAGTTCTCCCAGTTCAACAAGGACGACTCGCTACTGCTGGCCTCGGGGGTGTTCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR GCA 90 bp TTGTTGAGCCACAGCACCGAGCAGGAGGTGATATCTCCGATGCGGTaGAGGTTCCCCGAGATGAGGCTGGTCTCGGTGAGCCAACAGCCA +
Preference number: 1 (lower is better)
Translates to: LLSHSTEQEVISPMR*RFPEMRLVSVSQQP
Trigger: TGGCTGTTGGCTCACCGAGACCAGCCTCATCTCGGGGAACCTGCACCGCATCGGAGATATCACCTCCTGCTCGGTGCTGTGGCTCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR-3UTR GCA 90 bp GTTGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTGGCCCGTCGGTTGCTTaGTGGCCAGCGGCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: VGRVGAVRTQSPPHLPHGGPSVA*WPAALP
Trigger: AGGCAGGGCCGCTGGCCAGCAAGCAACCGACGGGCC...ACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp TGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTCCGTCGGTTGCTTGCTaGCCAGCGGCCCTGCCTGCG +
Preference number: 2 (lower is better)
Translates to: WACRRGAHAEPASPPAWSPSVAC*PAALPA
Trigger: CGCAGGCAGGGCCGCTGGCCAGCAAGCAACCGACGG...AGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp TCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTGCCGTGGTCATCTGGTGTGGCCTGTGTACCCCAAGTTaGCCAGGAGGCCGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: SEPRPSPSTGPAVVIWCGLCTPS*PGGRGG
Trigger: GCCCCCTCGGCCTCCTGGGCAACTTGGGGTACACAG...GCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CAA 90 bp CGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGAGCGCCAGGCTTaGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: RGAWRTRMVRGERQA*MVASSLAVSSSSCS
Trigger: GGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp GAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTGACCGGAGCCCCTGCCACCACTaGGCCACCGTCCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: ERVVRGHATHSGPQQRDRSPCHH*ATVQGP
Trigger: GGGGCCCTGGACGGTGGCCCAGTGGTGGCAGGGGCT...CCGGTCACGCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR CAA 90 bp TCCGCGATTGGTGGCGGCTGCATGGGGTCGGCCACCACCGCACCGTaGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGC +
Preference number: 2 (lower is better)
Translates to: SAIGGGCMGSATTAP*GQARLFTYRYLLSG
Trigger: GCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCAGGCCGAGGGGGCCTTaGGCTCCATCTGCACTGGCC +
Preference number: 2 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCRPRGP*APSALA
Trigger: GGCCAGTGCAGATGGAGCCCAAGGCCCCCTCGGCCT...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR CCA 90 bp GGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCCTGGGGACTGAAGACCACCACCACAGAGGTCCGTaGGCACTGCCTGCTCCGGGG +
Preference number: 2 (lower is better)
Translates to: GVVAGREQQLLLLGTEDHHHRGP*ALPAPG
Trigger: CCCCGGAGCAGGCAGTGCCCACGGACCTCTGTGGTG...GTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCCCACCACCGCACCGTTaGGCCAGGCGCGGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCPPPHR*ARRGCS
Trigger: TGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGG...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR TCA 90 bp CGAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCCCAGGTCTGGGCTTGTaGCCCCAGGGGCGAGTGAAC +
Preference number: 2 (lower is better)
Translates to: RGGLGLHLHWPPRAKHHSPGLGL*PQGRVN
Trigger: GTTCACTCGCCCCTGGGGTCACAAGCCCAGACCTGG...GCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp CGGTGGCTCCAGTGCACCCAGCACACCTCAGCGCCTCTGGCTGGCAAGCCAGGAGCCTTGGGCTCCATCTaGACTGGCCACCCCGTGCCA +
Preference number: 2 (lower is better)
Translates to: RWLQCTQHTSAPLAGKPGALGSI*TGHPVP
Trigger: TGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGC...TCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGGGTGCACTGGAGCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp GTGGCGGTCCCAGATGTAGCCGTGCCGGTCCTCCGCCCCGCTGGCCACGAAGTCGGTGGTGCGTGGACATaGAACACACTCGGGCCCACA +
Preference number: 2 (lower is better)
Translates to: VAVPDVAVPVLRPAGHEVGGAWT*NTLGPT
Trigger: TGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACC...GACTTCGTGGCCAGCGGGGCGGAGGACCGGCACGGCTACATCTGGGACCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp CCCAGCACACCTCAGCGCCTCTGGCTGGCAAGCCAGGAGAAGAAGGTGCGAGGCAGGCCGAGGGGGCCTTaGGCTCCATCTGCACTGGCC +
Preference number: 2 (lower is better)
Translates to: PSTPQRLWLASQEKKVRGRPRGP*APSALA
Trigger: GGCCAGTGCAGATGGAGCCCAAGGCCCCCTCGGCCT...GCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCCGGGCCGAGGCCAGCTaGGTCAGGTGTACCCCTAGC +
Preference number: 2 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSRAEAS*VRCTPS
Trigger: GCTAGGGGTACACCTGACCCAGCTGGCCTCGGCCCG...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR TCA 90 bp GTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTTGAGGTCGAACACCAGGAGCAGGTTTGTGTGTaGGCGTGTGGCGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VRTQSPPHLPHGLEVEHQEQVCV*ACGGAW
Trigger: CCAGGCCCCGCCACACGCTCACACACAAACCTGCTC...CTGGTGTTCGACCTCAAGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp GTTGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTGCCAGCGGCCCTGCCTaGGTTTGTTTTCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: VGRVGAVRTQSPPHLPHGASGPA*VCFHCS
Trigger: TGAGCAGTGAAAACAAACGCAGGCAGGGCCGCTGGC...ACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp AAGAAGGTGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGCTGGCCAGCGGCCCTaGCTGCGTTTGTTTTCACTG +
Preference number: 2 (lower is better)
Translates to: KKVRGRGRGAWRTRMVRGAGQRP*LRLFSL
Trigger: CAGTGAAAACAAACGCAGGCAGGGCCGCTGGCCAGC...CCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp GCGTGGGGAGCGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGTTGACCACATCCTCGTaGCGCAGCCTGGCCAGACAG +
Preference number: 2 (lower is better)
Translates to: AWGAPGFDGGVVAGREQQLTTSS*RSLARQ
Trigger: CTGTCTGGCCAGGCTGCGGCACGAGGATGTGGTCAA...CTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp AAGAAGGTGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGTGAGCAGCAGCTCCTaGTCCTGGGGACTGAAGACC +
Preference number: 2 (lower is better)
Translates to: KKVRGRGRGAWRTRMVRGVSSSS*SWGLKT
Trigger: GGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCAC...CCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp CGGTGGCTCCAGTGCACCCAGCACACCTCAGCGCCTCTGGCTGGCAAGCCAGGAGGGCTCCATCTGCACTaGCCACCCCGTGCCAAGCAT +
Preference number: 2 (lower is better)
Translates to: RWLQCTQHTSAPLAGKPGGLHLH*PPRAKH
Trigger: ATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCC...TCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGGGTGCACTGGAGCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp TGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTCCTCAGTGGTGTCTCTaGGGCTGTGAGCACCACAGA +
Preference number: 2 (lower is better)
Translates to: WACRRGAHAEPASPPAWSPQWCL*GCEHHR
Trigger: TCTGTGGTGCTCACAGCCCCAGAGACACCACTGAGG...AGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp CGCACCGTTGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCGAGCACGGGCCCTGCCGTaGTCATCTGGTGTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RTVGPGAAVHVQVPVVGRARALP*SSGVAG
Trigger: TCCTGCCACACCAGATGACCACGGCAGGGCCCGTGC...TCGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp CGGTGGCTCCAGTGCACCCAGCACACCTCAGCGCCTCTGGCTGGCAAGCCAGGAAGAAGCACTCGTCGTTaGGCGTGTAGGCGCGGTGCG +
Preference number: 2 (lower is better)
Translates to: RWLQCTQHTSAPLAGKPGRSTRR*ACRRGA
Trigger: CGCACCGCGCCTACACGCCCAACGACGAGTGCTTCT...TCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGGGTGCACTGGAGCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR TCA 90 bp TCTGGGGCTGTGAGCACCACAGAGGTCCGTGGGCACTGCCTGCTCCGGGGGCCCAGCATCACAGCTGCGTaGGCAGGTTTGTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: SGAVSTTEVRGHCLLRGPSITAA*AGLCVS
Trigger: GCTCACACACAAACCTGCTCACGCAGCTGTGATGCT...GGGCCCCCGGAGCAGGCAGTGCCCACGGACCTCTGTGGTGCTCACAGCCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR TCA 90 bp CCCGCTGGCCACGAAGTCCCTGCTGACGTCCAGGAAGATGAAGAAGCACTCGTCCGGGGGCCCCAGACCTaGATCAGGCCCGTCGGTTGC +
Preference number: 2 (lower is better)
Translates to: PAGHEVPADVQEDEEALVRGPQT*IRPVGC
Trigger: GCAACCGACGGGCCTGATTCAGGTCTGGGGCCCCCG...GACGAGTGCTTCTTCATCTTCCTGGACGTCAGCAGGGACTTCGTGGCCAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACAGGACCAGCCGAAGGTaGCCCGGGCCGAGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNRTSRR*PGPRPA
Trigger: AGCTGGCCTCGGCCCGGGGCACCTTCGGCTGGTCCT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR CCA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCTTGTGTGTGAGCGTGTaGCGGGGCCTGGTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSLCVSV*RGLVVP
Trigger: GGGGACAACCAGGCCCCGCCACACGCTCACACACAA...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR GCA 90 bp GAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTGACCGGGGTGGTGCGTGGACATaGAACACACTCGGGCCCACA +
Preference number: 2 (lower is better)
Translates to: ERVVRGHATHSGPQQRDRGGAWT*NTLGPT
Trigger: TGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACC...CCGGTCACGCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR GCA 90 bp GTTGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTTGGTGTGGCAGGATCTaGTTGATGCCTCAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: VGRVGAVRTQSPPHLPHGWCGRI*LMPQWC
Trigger: ACACCACTGAGGCATCAAGCAGATCCTGCCACACCA...ACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp CCCGCTGGCCACGAAGTCCCTGCTGACGTCCAGGAAGATGAAGAAGCACTCGTCCGGGCCGAGGCCAGCTaGGTCAGGTGTACCCCTAGC +
Preference number: 2 (lower is better)
Translates to: PAGHEVPADVQEDEEALVRAEAS*VRCTPS
Trigger: GCTAGGGGTACACCTGACCCAGCTGGCCTCGGCCCG...GACGAGTGCTTCTTCATCTTCCTGGACGTCAGCAGGGACTTCGTGGCCAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCACACCTCAGCGCCTCTaGCTGGCAAGCCAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSTPQRL*LASQEK
Trigger: CTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGT...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CAA 90 bp GCGAAGGAGTCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTaGTGCGGCCCCAGGAACACCCCCGAGGCCAGCAGTAGCGAGTCG +
Preference number: 2 (lower is better)
Translates to: AKESRLMTAISPDEE*CGPRNTPEASSSES
Trigger: CGACTCGCTACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGACTCCTTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR-3UTR TCA 90 bp CGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCCGGGACTGAAGACCACTaGGTTGACCACATCCTCGTG +
Preference number: 2 (lower is better)
Translates to: RQALMVASSLAVSSSSCSGTEDH*VDHILV
Trigger: CACGAGGATGTGGTCAACTCAGTGGTCTTCAGTCCC...GGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp GCGGTGCAGGTTCCCCGAGATGAGGCTGGTCTCGGTGAGCCAACAGCCAAACACCGCATGTCCGCGCTGTaGAGCAGCGAGATGGTCAGG +
Preference number: 2 (lower is better)
Translates to: AVQVPRDEAGLGEPTAKHRMSAL*SSEMVR
Trigger: CCTGACCATCTCGCTGCTGCACAGCGCGGACATGCG...GTGTTTGGCTGTTGGCTCACCGAGACCAGCCTCATCTCGGGGAACCTGCACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR-3UTR CCA 90 bp GTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACAGCCCCTGCCACCACTaGGCCACCGTCCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: VANCLFRALNGWCVDMQHSPCHH*ATVQGP
Trigger: GGGGCCCTGGACGGTGGCCCAGTGGTGGCAGGGGCT...GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR CCA 90 bp CAGGTTCCCCGAGATGAGGCTGGTCTCGGTGAGCCAACAGCCAAACACGTCATAGCTGTAGTGATCGCCTaGCCAGGTCGCGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: QVPRDEAGLGEPTAKHVIAVVIA*PGRGAG
Trigger: CCCCGCCCCGCGACCTGGCCAGGCGATCACTACAGC...TATGACGTGTTTGGCTGTTGGCTCACCGAGACCAGCCTCATCTCGGGGAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR-3UTR TCA 90 bp GAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTGACCGGAGCATCACAGCTGCGTaGGCAGGTTTGTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: ERVVRGHATHSGPQQRDRSITAA*AGLCVS
Trigger: GCTCACACACAAACCTGCTCACGCAGCTGTGATGCT...CCGGTCACGCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR GCA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGCCAAGCATCACAGCTaGGTGAGCAGGTTTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSAKHHS*VSRFVC
Trigger: ACACACAAACCTGCTCACGCAGCTGTGATGCTTGGC...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR GCA 90 bp GCCCATGCCGATGATGTGTCCGTGTATGTCTATGACGTGGTCCAGCGCGTCGAAACCCAGCACGGGCCCTaGCGTGGTCATCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: AHADDVSVYVYDVVQRVETQHGP*RGHLVW
Trigger: CCACACCAGATGACCACGGCAGGGCCCGTGCTGGGT...TTCGACGCGCTGGACCACGTCATAGACATACACGGACACATCATCGGCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp CTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCGGGCTCCATCTGCACTaGCCACCCCGTGCCAAGCAT +
Preference number: 2 (lower is better)
Translates to: LFIQGPERVVRGHATHSGGLHLH*PPRAKH
Trigger: ATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCC...GCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR TCA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACGTCCGTGTATGTCTATaGCGTGGTCCAGCGCGTCGA +
Preference number: 2 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNVRVCL*RGPARR
Trigger: TCGACGCGCTGGACCACGTCATAGACATACACGGAC...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp GTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAAGGCCTGTGGACTTGCTTaGTGTCTGCCCCTCAGGACC +
Preference number: 2 (lower is better)
Translates to: VSVWRGLVVPFLRRNCYKACGLA*CLPLRT
Trigger: GGTCCTGAGGGGCAGACAGCAAGCAAGTCCACAGGC...CTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAATCAGGCCCGTCGGTTaGTTGCTGGCCAGCGGCCCT +
Preference number: 2 (lower is better)
Translates to: CCCQLFIQGPERVVRGHAIRPVG*LLASGP
Trigger: AGGGCCGCTGGCCAGCAAGCAACCGACGGGCCTGAT...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACCCTGCCGTGGTCATCTaGTGTGGCAGGATCTGCTTG +
Preference number: 2 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNPAVVI*CGRICL
Trigger: CAAGCAGATCCTGCCACACCAGATGACCACGGCAGG...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGCCTCGTGCCGCAGCCTaGCCAGACAGATGTTGTAGT +
Preference number: 2 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCEPRAAA*PDRCCS
Trigger: ACTACAACATCTGTCTGGCCAGGCTGCGGCACGAGG...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR TCA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACAGAGCAGGTTTGTGTGTaGGCGTGTGGCGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CCQLFIQGPERVVRGHATEQVCV*ACGGAW
Trigger: CCAGGCCCCGCCACACGCTCACACACAAACCTGCTC...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR TCA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAGACCCCAGGGGCGAGTaGACGATCCCAGCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: CCCQLFIQGPERVVRGHADPRGE*TIPALP
Trigger: AGGCAAAGCTGGGATCGTTCACTCGCCCCTGGGGTC...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR TCA 90 bp GAGGTGATATCTCCGATGCGGTGCAGGTTCCCCGAGATGAGGCTGGTCTCGGTGGCGAGTCGTCCTTGTTaGACTGGGAGAACTGGGTGT +
Preference number: 2 (lower is better)
Translates to: EVISPMRCRFPEMRLVSVASRPC*TGRTGC
Trigger: ACACCCAGTTCTCCCAGTTCAACAAGGACGACTCGC...CACCGAGACCAGCCTCATCTCGGGGAACCTGCACCGCATCGGAGATATCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR-3UTR CCA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGTTGTGTGTGAGCGTGTaGCGGGGCCTGGTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: QLFIQGPERVVRGHATHSLCVSV*RGLVVP
Trigger: GGGGACAACCAGGCCCCGCCACACGCTCACACACAA...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR GCA 90 bp ACTGGGAGAACTGGGTGTAGCTCCAGTTGTAGGGCCGCATGTCCGCGCTGTGCAAGATGGTCAGGTCGTTaGTCCAGATCTGTTCGGCAG +
Preference number: 2 (lower is better)
Translates to: TGRTGCSSSCRAACPRCARWSGR*SRSVRQ
Trigger: CTGCCGAACAGATCTGGAGCAACGACCTGACCATCT...TGCACAGCGCGGACATGCGGCCCTACAACTGGAGCTACACCCAGTTCTCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR-3UTR CCA 90 bp GTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAAGAAAAGCCACAGAGCCTaGCGATGTCCTCAAGGGGTC +
Preference number: 2 (lower is better)
Translates to: VSVWRGLVVPFLRRNCYKKSHRA*RCPQGV
Trigger: GACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTT...CTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR CCA 90 bp GTGAGCAGCAGCTCCTGCTCCTGGGGACTGAAGACCACTGAGTTGACCACATCCTGCTTGATGCCTCAGTaGTGTCTCTGGGGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: VSSSSCSWGLKTTELTTSCLMPQ*CLWGCE
Trigger: CTCACAGCCCCAGAGACACCACTGAGGCATCAAGCA...GGATGTGGTCAACTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CCA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACATCCCAGCTTTGCCTGTaGACTTGCTTGCTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: CCQLFIQGPERVVRGHATSQLCL*TCLLSA
Trigger: GGCAGACAGCAAGCAAGTCCACAGGCAAAGCTGGGA...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR GCA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCATTCCTAAGGCGTAACTaGTATAAGCATCTCCACCTC +
Preference number: 2 (lower is better)
Translates to: CCCQLFIQGPERVVRGHAFLRRN*YKHLHL
Trigger: GAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR TCA 72 bp GTCCGTGGGCACTGCCTGCTCCGGGGGCCCCAGACCTaGATCAGGCCCGTCGGTTGCTTGCTGGCCAGCGGC +
Preference number: 3 (lower is better)
Translates to: VRGHCLLRGPQT*IRPVGCLLASG
Trigger: GCCGCTGGCCAGCAAGCAACCGACGGGCCTGATTCAGGTCTGGGGCCCCCGGAGCAGGCAGTGCCCACGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp GCAGGTCAATCTCCTCCGCGATTGGTGGCGGCTGCATaGGGTCGGCCACCACCGCACCGTTGGGCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: AGQSPPRLVAAA*GRPPPHRWARR
Trigger: GCGCCTGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGCGGAGGAGATTGACCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp CCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTaGGGAGCGCCAGGCTTTGATGGTGGCGTCGTCGCT +
Preference number: 3 (lower is better)
Translates to: PWARCLEDAHGA*GAPGFDGGVVA
Trigger: AGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp CAGGAGAAGAAGGTGCGAGGCCGTGGGCGAGGTGCCTaGAGGACGCGCATGGTGCGTGGGGAGCGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: QEKKVRGRGRGA*RTRMVRGERQA
Trigger: AGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CAA 90 bp GCGTGGGGAGCGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCCTGTGTACCCCAAGTaGCCCAGGAGGCCGAGGGGG +
Preference number: 3 (lower is better)
Translates to: AWGAPGFDGGVVAGREQQPVYPK*PRRPRG
Trigger: CCCCCTCGGCCTCCTGGGCAACTTGGGGTACACAGG...CTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 72 bp AAGCCAGGAGAAGAAGGTGCGAGGCCGTGGGCGAGGTaGCTGGAGGACGCGCATGGTGCGTGGGGAGCGCCA +
Preference number: 3 (lower is better)
Translates to: KPGEEGARPWAR*LEDAHGAWGAP
Trigger: TGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 72 bp CTCAGCGCCTCTGGCTGGCAAGCCAGGAGAAGAAGGTaGGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCA +
Preference number: 3 (lower is better)
Translates to: LSASGWQARRRR*EAVGEVPGGRA
Trigger: TGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp GTGGCGGCTGCATGGGGTCGGCCACCACCGCACCGTTaGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGT +
Preference number: 3 (lower is better)
Translates to: VAAAWGRPPPHR*ARRGCSRTGTC
Trigger: ACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp CTGGCTGGCAAGCCAGGAGAAGAAGGTGCGAGGCCGTaGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGG +
Preference number: 3 (lower is better)
Translates to: LAGKPGEEGARP*ARCLEDAHGAW
Trigger: CCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CAA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCACCCCTAGCCTGGGGTaGAGTGAGGAGCGGCACCCC +
Preference number: 3 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSTPSLG*SEERHP
Trigger: GGGGTGCCGCTCCTCACTCAACCCCAGGCTAGGGGT...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR GCA 72 bp GGCATCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTaGCGTGGTCATCTGGTGTGGCAGGATCTGCTTGAT +
Preference number: 3 (lower is better)
Translates to: GIGAPALTQHGP*RGHLVWQDLLD
Trigger: ATCAAGCAGATCCTGCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 72 bp ACCAGCAGGTCAATCTCCTCCGCGATTGGTGGCGGCTaGATGGGGTCGGCCACCACCGCACCGTTGGGCCAG +
Preference number: 3 (lower is better)
Translates to: TSRSISSAIGGG*MGSATTAPLGQ
Trigger: CTGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGCGGAGGAGATTGACCTGCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp GAGGTCGAACACCAGCAGGTCAATCTCCTCCGCGATTaGTGGCGGCTGCATGGGGTCGGCCACCACCGCACC +
Preference number: 3 (lower is better)
Translates to: EVEHQQVNLLRD*WRLHGVGHHRT
Trigger: GGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGCGGAGGAGATTGACCTGCTGGTGTTCGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp GGTGGCTCCAGTGCACCCAGCACACCTCAGCGCCTCTaGCTGGCAAGCCAGGAGAAGAAGGTGCGAGGCCGT +
Preference number: 3 (lower is better)
Translates to: GGSSAPSTPQRL*LASQEKKVRGR
Trigger: ACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGGGTGCACTGGAGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR TCA 72 bp GCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTTaGGGTCGAACACCAGCAGGTCAATCTCCTCCGCGA +
Preference number: 3 (lower is better)
Translates to: AHAEPASPPAWS*GRTPAGQSPPR
Trigger: TCGCGGAGGAGATTGACCTGCTGGTGTTCGACCTCAAGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp CTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTaGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: LHLSRSGKSHRA*RCPQGVPVAPV
Trigger: CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR CCA 72 bp CGGCCCTCACCCAGCACGGGCCCTGCCGTGGTCATCTaGTGTGGCAGGATCTGCTTGATGCCTCAGTGGTGT +
Preference number: 3 (lower is better)
Translates to: RPSPSTGPAVVI*CGRICLMPQWC
Trigger: ACACCACTGAGGCATCAAGCAGATCCTGCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CAA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACAATCAGGCCCGTCGGTaGCTTGCTGGCCAGCGGCCC +
Preference number: 3 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNNQARR*LAGQRP
Trigger: GGGCCGCTGGCCAGCAAGCAACCGACGGGCCTGATT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 72 bp AGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTaGCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTG +
Preference number: 3 (lower is better)
Translates to: RGPWAPSALATP*QASQLREQVCV
Trigger: CACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR GCA 72 bp AGGCTGATGACAGCAATCTCGCCGGATGAGGAGTTGTaGGGCCCCAGGAACACCCCCGAGGCCAGCAGTAGC +
Preference number: 3 (lower is better)
Translates to: RLMTAISPDEEL*GPRNTPEASSS
Trigger: GCTACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR CCA 72 bp GGCCCCAGACCTGAATCAGGCCCGTCGGTTGCTTGCTaGCCAGCGGCCCTGCCTGCGTTTGTTTTCACTGCT +
Preference number: 3 (lower is better)
Translates to: GPRPESGPSVAC*PAALPAFVFTA
Trigger: AGCAGTGAAAACAAACGCAGGCAGGGCCGCTGGCCAGCAAGCAACCGACGGGCCTGATTCAGGTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp GCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCCTaGGGACTGAAGACCACTGAGTTGACCACATCCTCG +
Preference number: 3 (lower is better)
Translates to: ASSLAVSSSSCS*GLKTTELTTSS
Trigger: CGAGGATGTGGTCAACTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp TGTAGGGCCGCATGTCCGCGCTGTGCAGCAGCGAGATaGTCAGGTCGTTGCTCCAGATCTGTTCGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: CRAACPRCAAAR*SGRCSRSVRQG
Trigger: CCCCTGCCGAACAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGGCCCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR-3UTR CAA 90 bp GGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGGCTTTGCCTGTGGACTaGCTTGCTGTCTGCCCCTCA +
Preference number: 3 (lower is better)
Translates to: GLHLHWPPRAKHHSCVSRALPVD*LAVCPS
Trigger: TGAGGGGCAGACAGCAAGCAAGTCCACAGGCAAAGC...CCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CAA 90 bp CGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCCTGTGGCAGGATCTGCTaGATGCCTCAGTGGTGTCTC +
Preference number: 3 (lower is better)
Translates to: RQALMVASSLAVSSSSCSCGRIC*MPQWCL
Trigger: GAGACACCACTGAGGCATCAAGCAGATCCTGCCACA...GGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 72 bp ATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTaGTCCTGGGGACTGAAGACCACTGAGTTGACCACA +
Preference number: 3 (lower is better)
Translates to: MVASSLAVSSSS*SWGLKTTELTT
Trigger: TGTGGTCAACTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR GCA 72 bp CACAGCACCGAGCAGGAGGTGATATCTCCGATGCGGTaGAGGTTCCCCGAGATGAGGCTGGTCTCGGTGAGC +
Preference number: 3 (lower is better)
Translates to: HSTEQEVISPMR*RFPEMRLVSVS
Trigger: GCTCACCGAGACCAGCCTCATCTCGGGGAACCTGCACCGCATCGGAGATATCACCTCCTGCTCGGTGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR CCA 72 bp CTCACCCAGCACGGGCCCTGCCGTGGTCATCTGGTGTaGCAGGATCTGCTTGATGCCTCAGTGGTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: LTQHGPCRGHLV*QDLLDASVVSL
Trigger: CAGAGACACCACTGAGGCATCAAGCAGATCCTGCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CAA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGCCTGTGTACCCCAAGTaGCCCAGGAGGCCGAGGGGG +
Preference number: 3 (lower is better)
Translates to: QLFIQGPERVVRGHATHSPVYPK*PRRPRG
Trigger: CCCCCTCGGCCTCCTGGGCAACTTGGGGTACACAGG...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR CCA 72 bp TGTGGCAGGATCTGCTTGATGCCTCAGTGGTGTCTCTaGGGCTGTGAGCACCACAGAGGTCCGTGGGCACTG +
Preference number: 3 (lower is better)
Translates to: CGRICLMPQWCL*GCEHHRGPWAL
Trigger: CAGTGCCCACGGACCTCTGTGGTGCTCACAGCCCCAGAGACACCACTGAGGCATCAAGCAGATCCTGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CCA 72 bp CCCATGCCGATGATGTGTCCGTGTATGTCTATGACGTaGTCCAGCGCGTCGAAGAAGGCATCGGAGCCCCGG +
Preference number: 3 (lower is better)
Translates to: PMPMMCPCMSMT*SSASKKASEPR
Trigger: CCGGGGCTCCGATGCCTTCTTCGACGCGCTGGACCACGTCATAGACATACACGGACACATCATCGGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CAA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGCGGCCCTGCCTGCGTTaGTTTTCACTGCTCATCCCA +
Preference number: 3 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCERPCLR*FSLLIP
Trigger: TGGGATGAGCAGTGAAAACAAACGCAGGCAGGGCCG...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CAA 90 bp CCCAGGAACACCCCCGAGGCCAGCAGTAGCGAGTCGTCCTTGTTGAACTGGGAGGAGATGGTCAGGTCGTaGCTCCAGATCTGTTCGGCA +
Preference number: 3 (lower is better)
Translates to: PRNTPEASSSESSLLNWEEMVRS*LQICSA
Trigger: TGCCGAACAGATCTGGAGCAACGACCTGACCATCTC...CTCCCAGTTCAACAAGGACGACTCGCTACTGCTGGCCTCGGGGGTGTTCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR GCA 72 bp GTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTaGGTGGACATGCAACACACTCGGGCCCACAGCAGC +
Preference number: 3 (lower is better)
Translates to: VANCLFRALNGW*VDMQHTRAHSS
Trigger: GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR CCA 72 bp GCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTaGTGCGTGGACATGCAACACACTCGGGCCCACAGC +
Preference number: 3 (lower is better)
Translates to: AVANCLFRALNG*CVDMQHTRAHS
Trigger: GCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR CAA 90 bp GTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACTGCCTGTGGACTTGCTaGCTGTCTGCCCCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: VANCLFRALNGWCVDMQHCLWTC*LSAPQD
Trigger: GTCCTGAGGGGCAGACAGCAAGCAAGTCCACAGGCA...GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR-3UTR CAA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACGTACAGGTACCTGTaGTCGGGCGACAGGCCCATG +
Preference number: 3 (lower is better)
Translates to: CCCQLFIQGPERVVRGHATYRYL*SGDRPM
Trigger: CATGGGCCTGTCGCCCGACAACAGGTACCTGTACGT...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR TCA 72 bp ACACCCCCGAGGCCAGCAGTAGCGAGTCGTCCTTGTTaGACTGGGAGAACTGGGTGTAGCTCCAGTTGTAGG +
Preference number: 3 (lower is better)
Translates to: TPPRPAVASRPC*TGRTGCSSSCR
Trigger: CCTACAACTGGAGCTACACCCAGTTCTCCCAGTTCAACAAGGACGACTCGCTACTGCTGGCCTCGGGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR GCA 72 bp TGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTaGTATAAGCATCTCCACCTCTCCCGCTCGGGAAAA +
Preference number: 3 (lower is better)
Translates to: WRGLVVPFLRRN*YKHLHLSRSGK
Trigger: TTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
3UTR-3UTR CAA 90 bp AGCGCGAAGGAGTCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTTGTGCAGTAGCGAGTCGTCCTaGTTGAACTGGGAGAACTGG +
Preference number: 3 (lower is better)
Translates to: SAKESRLMTAISPDEELCSSESS*LNWENW
Trigger: CCAGTTCTCCCAGTTCAACAAGGACGACTCGCTACT...GCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGACTCCTTCGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp GCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGAGCGCCAGGCTTCGGGCCGAGGCCAGCTaGGTCAGGTGTACCCCTAGC +
Preference number: 4 (lower is better)
Translates to: AVGEVPGGRAWCVGSARLRAEAS*VRCTPS
Trigger: GCTAGGGGTACACCTGACCCAGCTGGCCTCGGCCCG...AAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp CGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCCGAGGTCCGTGGGCACTaGCTGCTCCGGGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RQALMVASSLAVSSSSCSEVRGH*LLRGPQ
Trigger: CTGGGGCCCCCGGAGCAGGCAGTGCCCACGGACCTC...GGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp GGGTCGGCCACCACCGCACCGTTGGGCCAGGCGCGGCTGTTCACGTACAGGTACGGCACTGCGCTCGGGTaGCTTGGTGTGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSATTAPLGQARLFTYRYGTALG*LGVALG
Trigger: GCCCAGGGCCACACCAAGCCACCCGAGCGCAGTGCC...GTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGCCGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp AAGAAGGTGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGCCTGGAGGACGCGCATaGTGCGTGGGGAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: KKVRGRGRGAWRTRMVRGPGGRA*CVGSAR
Trigger: CCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGG...CCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp GTGGCGGTCCCAGATGTAGCCGTGCCGGTCCTCCGCCCCGCTGGCCACGAAGTCCCGAGGCGGGCAGCATaGCGGCAGGGGTGTACCGAT +
Preference number: 4 (lower is better)
Translates to: VAVPDVAVPVLRPAGHEVPRRAA*RQGCTD
Trigger: ATCGGTACACCCCTGCCGCCATGCTGCCCGCCTCGG...GACTTCGTGGCCAGCGGGGCGGAGGACCGGCACGGCTACATCTGGGACCGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CAA 72 bp GGTGGCGGCTGCATGGGGTCGGCCACCACCGCACCGTaGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: GGGCMGSATTAP*GQARLFTYRYL
Trigger: CAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGCCGACCCCATGCAGCCGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp AGAAGGTGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGGAGCAGGTTTGTGTGTaGGCGTGTGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRCEAVGEVPGGRAWCVGEQVCV*ACGGAW
Trigger: CCAGGCCCCGCCACACGCTCACACACAAACCTGCTC...CCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp GTGGCGGTCCCAGATGTAGCCGTGCCGGTCCTCCGCCCCGCTGGCCACGAAGTCCCAGGTCTGGGCTTGTaGCCCCAGGGGCGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: VAVPDVAVPVLRPAGHEVPGLGL*PQGRVN
Trigger: GTTCACTCGCCCCTGGGGTCACAAGCCCAGACCTGG...GACTTCGTGGCCAGCGGGGCGGAGGACCGGCACGGCTACATCTGGGACCGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp GCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGAGCGCCAGGCTTACGCGGTCCAGAAAGTaGCGCAAGCCCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AVGEVPGGRAWCVGSARLTRSRK*RKPSLA
Trigger: CGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGT...AAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp AGAAGGTGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGGCCAGGAGAAGAAGGTaGGAGGCCGTGGGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: RRCEAVGEVPGGRAWCVGARRRR*EAVGEV
Trigger: CACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGC...CCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp CGAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCCCAGGACATGGCCGCTaGGTGTCGGGGCACGTCGCG +
Preference number: 4 (lower is better)
Translates to: RGGLGLHLHWPPRAKHHSPGHGR*VSGHVA
Trigger: CGCGACGTGCCCCGACACCCAGCGGCCATGTCCTGG...GCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCTGCGGCAGGGGGACGTaGCCGGGTCACCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCCGRGT*PGHRLP
Trigger: TGGAAGCCGGTGACCCGGCCACGTCCCCCTGCCGCA...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTAGCCCCTGCCACCACTaGGCCACCGTCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EGALGSICTGHPVPSITASPCHH*ATVQGP
Trigger: GGGGCCCTGGACGGTGGCCCAGTGGTGGCAGGGGCT...AGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGTCCGACAGCTGTGGCTaGGCCCGCCCCTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: PAREKATEPGDVLKGSRWSDSCG*ARPSST
Trigger: CGTGCTGGAGGGGCGGGCGCAGCCACAGCTGTCGGA...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCGACAGCTGTGGCTaGGCCCGCCCCTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGSDSCG*ARPSST
Trigger: CGTGCTGGAGGGGCGGGCGCAGCCACAGCTGTCGGA...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp AGCACTCGTCGTTGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTACCCAGCACGGGCCCTaGCGTGGTCATCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: STRRWACRRGAHAEPASPTQHGP*RGHLVW
Trigger: CCACACCAGATGACCACGGCAGGGCCCGTGCTGGGT...AGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCAACGACGAGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCGGAGGACGCGCATGGTaGGTGGGGAGCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCGGRAW*VGSARL
Trigger: AAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCC...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCAGGCCGTGGGCGAGGTaGCTGGAGGACGCGCATGGT +
Preference number: 4 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCRPWAR*LEDAHG
Trigger: ACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCT...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GAAGGCATCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTGCCGTGGTCATCTGGCACTGGCCACCCCGTaGCAAGCATCACAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: EGIGAPALTQHGPCRGHLALATP*QASQLR
Trigger: ACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGC...CAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGATGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGGCACTGCGCTCGGGTaGCTTGGTGTGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSGTALG*LGVALG
Trigger: GCCCAGGGCCACACCAAGCCACCCGAGCGCAGTGCC...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GCGTGGGGAGCGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGGCACGGGCCCTGCCGTaGTCATCTGGTGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AWGAPGFDGGVVAGREQQARALP*SSGVAG
Trigger: TCCTGCCACACCAGATGACCACGGCAGGGCCCGTGC...CTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp TGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTAGAAGCACTCGTCGTTaGGCGTGTAGGCGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: WACRRGAHAEPASPPAWSRSTRR*ACRRGA
Trigger: CGCACCGCGCCTACACGCCCAACGACGAGTGCTTCT...AGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp GGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGCCTGGAGGACGCGCATaGTGCGTGGGGAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLHLHWPPRAKHHSCVSRPGGRA*CVGSAR
Trigger: CCTGGCGCTCCCCACGCACCATGCGCGTCCTCCAGG...CCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGCCGTCGGTTGCTTGCTaGCCAGCGGCCCTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: GLHLHWPPRAKHHSCVSRPSVAC*PAALPA
Trigger: CGCAGGCAGGGCCGCTGGCCAGCAAGCAACCGACGG...CCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CAA 72 bp TGGAGGACGCGCATGGTGCGTGGGGAGCGCCAGGCTTaGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WRTRMVRGERQA*MVASSLAVSSS
Trigger: GCTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp GAGGCCAGCTGGGTCAGGTGTACCCCTAGCCTGGGGTTGAGTGAGGAGCGGCACCGCCCTCGTCCATCGTaGCATTCTGCCCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EASWVRCTPSLGLSEERHRPRPS*HSAQAA
Trigger: GGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCG...GTGCCGCTCCTCACTCAACCCCAGGCTAGGGGTACACCTGACCCAGCTGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR TCA 90 bp GAAGGCATCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTGCCGTGGTCATCTGCCTCCCGCATGGTCTTaGGGTCGAACACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: EGIGAPALTQHGPCRGHLPPAWS*GRTPAG
Trigger: ACCTGCTGGTGTTCGACCTCAAGACCATGCGGGAGG...CAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGATGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGGGGCCCACAGCAGCGTaGCCGGCCGCTCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCEGPTAA*PAAPKP
Trigger: GGGCTTGGGAGCGGCCGGTCACGCTGCTGTGGGCCC...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGAGCGCCATATCTCCGATGCGGTaGAGGTTCCCCGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: CEAVGEVPGGRAWCVGSAISPMR*RFPEMR
Trigger: CCTCATCTCGGGGAACCTGCACCGCATCGGAGATAT...GGCGCTCCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp AGAAGGTGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGGCCTCCTCGTTGTCGCTaGCCAGGTCAAAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: RRCEAVGEVPGGRAWCVGPPRCR*PGQRCG
Trigger: GCCGCATCTTTGACCTGGGCAGCGACAACGAGGAGG...CCCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCTGGCGCCTGTGGCACTaGGCTCGGGTGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCWRLWH*ARVAWC
Trigger: ACACCAAGCCACCCGAGCGCAGTGCCACAGGCGCCA...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTAGGCCGTGGGCGAGGTaGCTGGAGGACGCGCATGGT +
Preference number: 4 (lower is better)
Translates to: EGALGSICTGHPVPSITARPWAR*LEDAHG
Trigger: ACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCT...AGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTGCCTGTGGACTTGCTTaGTGTCTGCCCCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: WACRRGAHAEPASPPAWSACGLA*CLPLRT
Trigger: GGTCCTGAGGGGCAGACAGCAAGCAAGTCCACAGGC...AGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp CACCGTTGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCGACATGCGGCAGGGGGACGTaGCCGGGTCACCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HRWARRGCSRTGTCCRATCGRGT*PGHRLP
Trigger: TGGAAGCCGGTGACCCGGCCACGTCCCCCTGCCGCA...TGTCGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp CGAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCGCACGGGCCCTGCCGTaGTCATCTGGTGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGGLGLHLHWPPRAKHHSARALP*SSGVAG
Trigger: TCCTGCCACACCAGATGACCACGGCAGGGCCCGTGC...GCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCGACAGGCCCATTGGTGGCGGCTGCATaGGGTCGGCCACCACCGCAC +
Preference number: 4 (lower is better)
Translates to: WARRGCSRTGTCCRATGPLVAAA*GRPPPH
Trigger: GTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAA...TGGGCCTGTCGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCGTGGGCGAGGTGCCTaGAGGACGCGCATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: PAREKATEPGDVLKGSRWRGRGA*RTRMVR
Trigger: ACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACG...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGAGCCCCTGCCACCACTaGGCCACCGTCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVSPCHH*ATVQGP
Trigger: GGGGCCCTGGACGGTGGCCCAGTGGTGGCAGGGGCT...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp AGGGCCGCATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCTCCAGAGCTGTAGTGATCGCCTaGCCAGGTCGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RAACPRCAAARWSGRCSRAVVIA*PGRGAG
Trigger: CCCCGCCCCGCGACCTGGCCAGGCGATCACTACAGC...TCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR CAA 72 bp GCTCCGGGGGCCCCAGACCTGAATCAGGCCCGTCGGTaGCTTGCTGGCCAGCGGCCCTGCCTGCGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: APGAPDLNQARR*LAGQRPCLRLF
Trigger: AAACAAACGCAGGCAGGGCCGCTGGCCAGCAAGCAACCGACGGGCCTGATTCAGGTCTGGGGCCCCCGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp TCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTGCCGTGGTCATCTGGTGTGGCGGGACTGAAGACCACTaGGTTGACCACATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: SEPRPSPSTGPAVVIWCGGTEDH*VDHILV
Trigger: CACGAGGATGTGGTCAACTCAGTGGTCTTCAGTCCC...GCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCGAGCAGGTTTGTGTGTaGGCGTGTGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGEQVCV*ACGGAW
Trigger: CCAGGCCCCGCCACACGCTCACACACAAACCTGCTC...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp TTGAGGTCGAACACCAGCAGGTCAATCTCCTCCGCGATTGGTGGCGGCTGCATGGGGCCCACAGCAGCGTaGCCGGCCGCTCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LRSNTSRSISSAIGGGCMGPTAA*PAAPKP
Trigger: GGGCTTGGGAGCGGCCGGTCACGCTGCTGTGGGCCC...CATGCAGCCGCCACCAATCGCGGAGGAGATTGACCTGCTGGTGTTCGACCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTGTTCCCGCAGCGTCTaGACCTCCACGCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGCSRSV*TSTQGT
Trigger: GGTGCCCTGCGTGGAGGTGCAGACGCTGCGGGAACA...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR GCA 90 bp CGAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCACGCGGTCCAGAAAGTaGCGCAAGCCCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: RGGLGLHLHWPPRAKHHSTRSRK*RKPSLA
Trigger: CGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGT...GCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTGGCGCCTGTGGCACTaGGCTCGGGTGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GLHLHWPPRAKHHSCVSRWRLWH*ARVAWC
Trigger: ACACCAAGCCACCCGAGCGCAGTGCCACAGGCGCCA...CCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCCGGTGGCTCCAGTaGACCCAGCACACCTCAGCG +
Preference number: 4 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGSRWLQ*TQHTSA
Trigger: CGCTGAGGTGTGCTGGGTGCACTGGAGCCACCGGGA...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTTCCCGGTGGCTCCAGTaGACCCAGCACACCTCAGCG +
Preference number: 4 (lower is better)
Translates to: EGALGSICTGHPVPSITASRWLQ*TQHTSA
Trigger: CGCTGAGGTGTGCTGGGTGCACTGGAGCCACCGGGA...AGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCGCACTGGCCACCCCGTaGCAAGCATCACAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCALATP*QASQLR
Trigger: ACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGC...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CGCACCGTTGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCGAGCCTTGGGCTCCATCTaGACTGGCCACCCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: RTVGPGAAVHVQVPVVGRALGSI*TGHPVP
Trigger: TGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGC...TCGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCCTGTGTACCCCAAGTTaGCCAGGAGGCCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSLCTPS*PGGRGG
Trigger: GCCCCCTCGGCCTCCTGGGCAACTTGGGGTACACAG...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGAGGACCAGCCGAAGGTaGCCCGGGCCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVRTSRR*PGPRPA
Trigger: AGCTGGCCTCGGCCCGGGGCACCTTCGGCTGGTCCT...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CCACCGCACCGTTGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGATCAGGCCCGTCGGTTaGTTGCTGGCCAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPHRWARRGCSRTGTCCRIRPVG*LLASGP
Trigger: AGGGCCGCTGGCCAGCAAGCAACCGACGGGCCTGAT...CCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTGCGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp AGTTGTAGGGCCGCATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCGACACGGCCTGCCATTaGCGGCACACCAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: SCRAACPRCAAARWSGRCDTACH*RHTSPA
Trigger: CGCCGGGCTGGTGTGCCGCCAATGGCAGGCCGTGTC...GCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGGCCCTACAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCCTCGTACCAGGACATaGCCGCTGGGTGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PAREKATEPGDVLKGSRWPRTRT*PLGVGA
Trigger: TGCCCCGACACCCAGCGGCCATGTCCTGGTACGAGG...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp GAGGCCAGCTGGGTCAGGTGTACCCCTAGCCTGGGGTTGAGTGAGGAGCGGCACTGCTCTTGGCGCCTGTaGCACTGCGCTCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: EASWVRCTPSLGLSEERHCSWRL*HCARVA
Trigger: AGCCACCCGAGCGCAGTGCCACAGGCGCCAAGAGCA...GTGCCGCTCCTCACTCAACCCCAGGCTAGGGGTACACCTGACCCAGCTGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp CACCGTTGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCGACACGTGGGCGAGGTGCCTaGAGGACGCGCATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: HRWARRGCSRTGTCCRATRGRGA*RTRMVR
Trigger: ACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACG...TGTCGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCTTGTGTGTGAGCGTGTaGCGGGGCCTGGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCLCVSV*RGLVVP
Trigger: GGGGACAACCAGGCCCCGCCACACGCTCACACACAA...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCTCCAGATCTGTTCGGCCGCCCTCGTCCATCGTaGCATTCTGCCCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VRAVQQRDGQVVAPDLFGRPRPS*HSAQAA
Trigger: GGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCG...GCCGAACAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR GCA 90 bp CCCAGGAACACCCCCGAGGCCAGCAGTAGCGAGTCGTCCTTGTTGAACTGGGAGTCCCGCGACACGGCCTaGCATTGGCGGCACACCAGC +
Preference number: 4 (lower is better)
Translates to: PRNTPEASSSESSLLNWESRDTA*HWRHTS
Trigger: GCTGGTGTGCCGCCAATGGCAGGCCGTGTCGCGGGA...CTCCCAGTTCAACAAGGACGACTCGCTACTGCTGGCCTCGGGGGTGTTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR GCA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGGGCCCGTCGGTTGCTTaGTGGCCAGCGGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCEGPSVA*WPAALP
Trigger: AGGCAGGGCCGCTGGCCAGCAAGCAACCGACGGGCC...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp AACAGCCAAACACGTCATAGGGCTTGTTCCGCACGCGGGACAGCAGCGCGAAGGCCAGGACATGGCCGCTaGGTGTCGGGGCACGTCGCG +
Preference number: 4 (lower is better)
Translates to: NSQTRHRACSARGTAARRPGHGR*VSGHVA
Trigger: CGCGACGTGCCCCGACACCCAGCGGCCATGTCCTGG...CCTTCGCGCTGCTGTCCCGCGTGCGGAACAAGCCCTATGACGTGTTTGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp CGAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCCTGAGGTGCAGGACCTaGTCTGTGTGTTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGGLGLHLHWPPRAKHHSLRCRT*SVCSRS
Trigger: GCTGCGGGAACACACAGACCAGGTCCTGCACCTCAG...GCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp GCGTGGGGAGCGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGCCTCAGTGGTGTCTCTaGGGCTGTGAGCACCACAGA +
Preference number: 4 (lower is better)
Translates to: AWGAPGFDGGVVAGREQQPQWCL*GCEHHR
Trigger: TCTGTGGTGCTCACAGCCCCAGAGACACCACTGAGG...CTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CAA 72 bp TGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTaGAGGTCGAACACCAGCAGGTCAATCTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: CARRARLTSRMV*RSNTSRSISSA
Trigger: CGCGGAGGAGATTGACCTGCTGGTGTTCGACCTCAAGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp CCCAGCACACCTCAGCGCCTCTGGCTGGCAAGCCAGGAGAAGAAGGTGCGAGGCGCACCGAGCAGGAGGTaGTATCTCCGATGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PSTPQRLWLASQEKKVRGAPSRR*YLRCGA
Trigger: TGCACCGCATCGGAGATATCACCTCCTGCTCGGTGC...GCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp GAGGCCAGCTGGGTCAGGTGTACCCCTAGCCTGGGGTTGAGTGAGGAGCGGCACCCTGGAAGGCATTGTTaGGCCACAGCACCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EASWVRCTPSLGLSEERHPGRHC*ATAPSR
Trigger: CCTGCTCGGTGCTGTGGCTCAACAATGCCTTCCAGG...GTGCCGCTCCTCACTCAACCCCAGGCTAGGGGTACACCTGACCCAGCTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCCTGGGGACTGAAGACCACGTCCGTGTATGTCTATaGCGTGGTCCAGCGCGTCGA +
Preference number: 4 (lower is better)
Translates to: GVVAGREQQLLLLGTEDHVRVCL*RGPARR
Trigger: TCGACGCGCTGGACCACGTCATAGACATACACGGAC...GTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp CCGCATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCTCCAGATCTGCCGGATGAGGAGTTGTaGGGCCCCAGGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: PHVRAVQQRDGQVVAPDLPDEEL*GPRNTP
Trigger: GGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGG...CAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR GCA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCCCTTGGTCTCTAGCATaGGCTCCGACAGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCPWSLA*APTAVA
Trigger: AGCCACAGCTGTCGGAGCGCATGCTAGAGACCAAGG...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGGGAGGACGCGCATGGTaGGTGGGGAGCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCEGGRAW*VGSARL
Trigger: AAGCCTGGCGCTCCCCACGCACCATGCGCGTCCTCC...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGATGCCGATCTGGTGTaGGGAGTAGGTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EGALGSICTGHPVPSITADADLV*GVGEAA
Trigger: GGCTGCCTCACCTACTCCCCACACCAGATCGGCATC...AGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp GAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTAATCTCCTCCGCGATTaGTGGCGGCTGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: EGALGSICTGHPVPSITANLLRD*WRLHGV
Trigger: GACCCCATGCAGCCGCCACCAATCGCGGAGGAGATT...AGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCACACCTCAGCGCCTCTaGCTGGCAAGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGTPQRL*LASQEK
Trigger: CTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGT...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCGACAGGCCCAACACCTCAGCGCCTCTaGCTGGCAAGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WARRGCSRTGTCCRATGPTPQRL*LASQEK
Trigger: CTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGT...TGGGCCTGTCGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp CCCGCTGGCCACGAAGTCCCTGCTGACGTCCAGGAAGATGAAGAAGCACTCGTCCACCACAGAGGTCCGTaGGCACTGCCTGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PAGHEVPADVQEDEEALVHHRGP*ALPAPG
Trigger: CCCCGGAGCAGGCAGTGCCCACGGACCTCTGTGGTG...GACGAGTGCTTCTTCATCTTCCTGGACGTCAGCAGGGACTTCGTGGCCAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTCCGTGTATGTCTATaGCGTGGTCCAGCGCGTCGA +
Preference number: 4 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSVRVCL*RGPARR
Trigger: TCGACGCGCTGGACCACGTCATAGACATACACGGAC...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp CTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCGGGAGCGCCAGGCTTTaGTGGTGGCGTCGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LFIQGPERVVRGHATHSGGSARL*WWRRRW
Trigger: CCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCC...GCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGGTTTATTCAGGGCCCTaGACGGGTGGTGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: PAREKATEPGDVLKGSRWVYSGP*TGGAWT
Trigger: TGTCCACGCACCACCCGTTCAGGGCCCTGAATAAAC...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp AGTTGTAGGGCCGCATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCCGCATGTCCGCGCTGTaGAGCAGCGAGATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SCRAACPRCAAARWSGRCRMSAL*SSEMVR
Trigger: CCTGACCATCTCGCTGCTGCACAGCGCGGACATGCG...GCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGGCCCTACAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR GCA 90 bp CGAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCATATCTCCGATGCGGTaGAGGTTCCCCGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RGGLGLHLHWPPRAKHHSISPMR*RFPEMR
Trigger: CCTCATCTCGGGGAACCTGCACCGCATCGGAGATAT...GCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGGGCTGTCGAAGCGGCTaGAGTCGGCCACCATCACCG +
Preference number: 4 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCEGCRSG*SRPPSP
Trigger: CGGTGATGGTGGCCGACTGCAGCCGCTTCGACAGCC...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TTGAGGTCGAACACCAGCAGGTCAATCTCCTCCGCGATTGGTGGCGGCTGCATGGCGATTGGTGGCGGCTaGATGGGGTCGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: LRSNTSRSISSAIGGGCMAIGGG*MGSATT
Trigger: GGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGC...CATGCAGCCGCCACCAATCGCGGAGGAGATTGACCTGCTGGTGTTCGACCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGGCCTTGGGCTCCATCTaGACTGGCCACCCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCEALGSI*TGHPVP
Trigger: TGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGC...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp AGCACTCGTCGTTGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTGAACGATCCCAGCTTTaGCTGTGGACTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: STRRWACRRGAHAEPASPERSQL*LWTCLL
Trigger: CAGCAAGCAAGTCCACAGGCAAAGCTGGGATCGTTC...AGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCAACGACGAGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp GCGAAGGAGTCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTTGTGCGGCCGCGGGGCGGGGGCCTaGTACTTCACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: AKESRLMTAISPDEELCGRGAGA*YFTVQS
Trigger: GGACTGCACTGTGAAGTAGCAGGCCCCCGCCCCGCG...GCCGCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGACTCCTTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp GAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTGACCGGGAGCAGGACGCGAACTaGTACCCGGAATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ERVVRGHATHSGPQQRDREQDAN*YPEWEK
Trigger: CTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTC...CCGGTCACGCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp CAGCAATCTCGCCGGATGAGGAGTTGTGCGGCCCCAGGAACACCCCCGAGGCCAGAGCAGGACGCGAACTaGTACCCGGAATGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QQSRRMRSCAAPGTPPRPEQDAN*YPEWEK
Trigger: CTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTC...TGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp GAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTGACCGGCCTGCCGTGGTCATCTaGTGTGGCAGGATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ERVVRGHATHSGPQQRDRPAVVI*CGRICL
Trigger: CAAGCAGATCCTGCCACACCAGATGACCACGGCAGG...CCGGTCACGCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTCTTGAGGTCGAACACCAGCCTGCCGTGGTCATCTaGTGTGGCAGGATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VRTQSPPHLPHGLEVEHQPAVVI*CGRICL
Trigger: CAAGCAGATCCTGCCACACCAGATGACCACGGCAGG...CTGGTGTTCGACCTCAAGACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp GTTGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTCCCGCATGGTTGTATGTCTATGACGTaGTCCAGCGCGTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VGRVGAVRTQSPPHLPHGCMSMT*SSASKK
Trigger: CTTCTTCGACGCGCTGGACCACGTCATAGACATACA...ACCATGCGGGAGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp TGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATCCACCACCGCACCGTTaGGCCAGGCGCGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CVSVWRGLVVPFLRRNCYPPPHR*ARRGCS
Trigger: TGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGG...ATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATTTGGTGGCGGCTGCATaGGGTCGGCCACCACCGCAC +
Preference number: 4 (lower is better)
Translates to: CVSVWRGLVVPFLRRNCYLVAAA*GRPPPH
Trigger: GTGCGGTGGTGGCCGACCCCATGCAGCCGCCACCAA...ATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGCCTCGTGCCGCAGCCTaGCCAGACAGATGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: GLHLHWPPRAKHHSCVSRPRAAA*PDRCCS
Trigger: ACTACAACATCTGTCTGGCCAGGCTGCGGCACGAGG...CCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTGACCGGCCTCGTGCCGCAGCCTaGCCAGACAGATGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: ERVVRGHATHSGPQQRDRPRAAA*PDRCCS
Trigger: ACTACAACATCTGTCTGGCCAGGCTGCGGCACGAGG...CCGGTCACGCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGGGGCTCCATCTGCACTaGCCACCCCGTGCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVGLHLH*PPRAKH
Trigger: ATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCC...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp CCGCATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCTCCAGATCTGGCACCGAGCAGGAGGTaGTATCTCCGATGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PHVRAVQQRDGQVVAPDLAPSRR*YLRCGA
Trigger: TGCACCGCATCGGAGATATCACCTCCTGCTCGGTGC...CAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR TCA 90 bp GAGGCCAGCTGGGTCAGGTGTACCCCTAGCCTGGGGTTGAGTGAGGAGCGGCACGCCGCTTCACCACGTTaGCGTTCTCTGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: EASWVRCTPSLGLSEERHAASPR*RSLTPH
Trigger: ATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGC...GTGCCGCTCCTCACTCAACCCCAGGCTAGGGGTACACCTGACCCAGCTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCCGCTTCACCACGTTaGCGTTCTCTGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: EGALGSICTGHPVPSITAAASPR*RSLTPH
Trigger: ATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGC...AGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTAGCATCACAGCTGCGTaGGCAGGTTTGTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: EGALGSICTGHPVPSITASITAA*AGLCVS
Trigger: GCTCACACACAAACCTGCTCACGCAGCTGTGATGCT...AGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp AGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCTGGGAGAAGCTGAGGTaGAGGACCTGGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RALNGWCVDMQHTRAHSSWEKLR*RTWSVC
Trigger: ACACACAGACCAGGTCCTGCACCTCAGCTTCTCCCA...GCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR GCA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGTTGACCACATCCTCGTaGCGCAGCCTGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVLTTSS*RSLARQ
Trigger: CTGTCTGGCCAGGCTGCGGCACGAGGATGTGGTCAA...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TCTCGCCGGATGAGGAGTTGTGCGGCCCCAGGAACACCCCCGAGGCCAGCAGTACCTGCTACTTCACAGTaGAGTCCTTGGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: SRRMRSCAAPGTPPRPAVPATSQ*SPWSRT
Trigger: CGTCCTGCTCCAAGGACTGCACTGTGAAGTAGCAGG...TACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp CTGGGAGAACTGGGTGTAGCTCCAGTTGTAGGGCCGCATGTCCGCGCTGTGCAGCTGAGGTGCAGGACCTaGTCTGTGTGTTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LGELGVAPVVGPHVRAVQLRCRT*SVCSRS
Trigger: GCTGCGGGAACACACAGACCAGGTCCTGCACCTCAG...CTGCACAGCGCGGACATGCGGCCCTACAACTGGAGCTACACCCAGTTCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp TCTCGCCGGATGAGGAGTTGTGCGGCCCCAGGAACACCCCCGAGGCCAGCAGTAAACTGGTACCCGGAATaGGAGAAGCTGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRRMRSCAAPGTPPRPAVNWYPE*EKLRCR
Trigger: CCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTT...TACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp GCCCATGCCGATGATGTGTCCGTGTATGTCTATGACGTGGTCCAGCGCGTCGAAGAAGGTGCGAGGCCGTaGGCGAGGTGCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AHADDVSVYVYDVVQRVEEGARP*ARCLED
Trigger: GTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTC...TTCGACGCGCTGGACCACGTCATAGACATACACGGACACATCATCGGCATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
3UTR CAA 72 bp ATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTaGCTCCAGATCTGTTCGGCAGGGGCGGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: MSALCSSEMVRS*LQICSAGAAVV
Trigger: CACTACAGCCGCCCCTGCCGAACAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
3UTR CAA 72 bp TCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTaGTGCGGCCCCAGGAACACCCCCGAGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SRLMTAISPDEE*CGPRNTPEASS
Trigger: ACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR TCA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGACAGGCCCATGCCGATaGTGTGTCCGTGTATGTCTA +
Preference number: 4 (lower is better)
Translates to: PAREKATEPGDVLKGSRWTGPCR*CVRVCL
Trigger: TAGACATACACGGACACATCATCGGCATGGGCCTGT...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GTGAGCAGCAGCTCCTGCTCCTGGGGACTGAAGACCACTGAGTTGACCACATCCGACCCCAGGGGCGAGTaGACGATCCCAGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: VSSSSCSWGLKTTELTTSDPRGE*TIPALP
Trigger: AGGCAAAGCTGGGATCGTTCACTCGCCCCTGGGGTC...GGATGTGGTCAACTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACGGGGGCCCCAGACCTaGATCAGGCCCGTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: CCQLFIQGPERVVRGHATRGPQT*IRPVGC
Trigger: GCAACCGACGGGCCTGATTCAGGTCTGGGGCCCCCG...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp AGCGCGAAGGAGTCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTTGTGCTCCATCGTGACATTCTaGCCAGGCGGCCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: SAKESRLMTAISPDEELCSIVTF*PGGPRP
Trigger: CGGCCGTGGGCCGCCTGGGCAGAATGTCACGATGGA...GCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGACTCCTTCGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR GCA 90 bp GTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAAGCGCATGTCCGCGCTGTaGAGCAGCGAGATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VSVWRGLVVPFLRRNCYKRMSAL*SSEMVR
Trigger: CCTGACCATCTCGCTGCTGCACAGCGCGGACATGCG...CTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR GCA 90 bp CCTCACCTCCCGCATGGTCTTGAGGTCGAACACCAGCAGGTCAATCTCCTCCGCGTGAGCAGCAGCTCCTaGTCCTGGGGACTGAAGACC +
Preference number: 4 (lower is better)
Translates to: PHLPHGLEVEHQQVNLLRVSSSS*SWGLKT
Trigger: GGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCAC...GCGGAGGAGATTGACCTGCTGGTGTTCGACCTCAAGACCATGCGGGAGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAAGGACCAGCCGAAGGTaGCCCGGGCCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRRTSRR*PGPRPA
Trigger: AGCTGGCCTCGGCCCGGGGCACCTTCGGCTGGTCCT...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CCCGCTGGCCACGAAGTCCCTGCTGACGTCCAGGAAGATGAAGAAGCACTCGTCGGTGGTGCGTGGACATaGAACACACTCGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: PAGHEVPADVQEDEEALVGGAWT*NTLGPT
Trigger: TGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACC...GACGAGTGCTTCTTCATCTTCCTGGACGTCAGCAGGGACTTCGTGGCCAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTGACACGGCCTGCCATTaGCGGCACACCAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: VTAISISTSPAREKATEPDTACH*RHTSPA
Trigger: CGCCGGGCTGGTGTGCCGCCAATGGCAGGCCGTGTC...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp AGGGCCGCATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCTCCAGATCACAGTGCAGTCCTTaGAGCAGGACGCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: RAACPRCAAARWSGRCSRSQCSP*SRTRTG
Trigger: ACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGA...TCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp CGGTGGCTCCAGTGCACCCAGCACACCTCAGCGCCTCTGGCTGGCAAGCCAGGACTGGCATTGAGGTTCTaGATCTTGAACAGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RWLQCTQHTSAPLAGKPGLALRF*ILNSRF
Trigger: GAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAG...TCCTGGCTTGCCAGCCAGAGGCGCTGAGGTGTGCTGGGTGCACTGGAGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGCCACCACCGCACCGTTaGGCCAGGCGCGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QLFIQGPERVVRGHATHSPPPHR*ARRGCS
Trigger: TGAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGG...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGAGCAGCTCCTGCTCCTaGGGACTGAAGACCACTGAG +
Preference number: 4 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVSSSCS*GLKTTE
Trigger: CTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCT...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAAGGACGCGCATGGTGCGTaGGGAGCGCCAGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: VSVWRGLVVPFLRRNCYKDAHGA*GAPGFD
Trigger: ATCAAAGCCTGGCGCTCCCCACGCACCATGCGCGTC...CTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGCTCAGCGCCTCTGGCTaGCAAGCCAGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCELSASG*QARRRR
Trigger: CCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAG...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAAGTTGTGTGTGAGCGTGTaGCGGGGCCTGGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VSVWRGLVVPFLRRNCYKLCVSV*RGLVVP
Trigger: GGGGACAACCAGGCCCCGCCACACGCTCACACACAA...CTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACAGGCCGAGGGGGCCTTaGGCTCCATCTGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: VANCLFRALNGWCVDMQHRPRGP*APSALA
Trigger: GGCCAGTGCAGATGGAGCCCAAGGCCCCCTCGGCCT...GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCACGGGCCGAGGCCAGCTaGGTCAGGTGTACCCCTAGC +
Preference number: 4 (lower is better)
Translates to: CCCQLFIQGPERVVRGHARAEAS*VRCTPS
Trigger: GCTAGGGGTACACCTGACCCAGCTGGCCTCGGCCCG...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACAGGGCCCTGAACGGGTaGTGCGTGGACATGCAACAC +
Preference number: 4 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNRALNG*CVDMQH
Trigger: GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp TGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATGCACCGAGCAGGAGGTaGTATCTCCGATGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: CVSVWRGLVVPFLRRNCYAPSRR*YLRCGA
Trigger: TGCACCGCATCGGAGATATCACCTCCTGCTCGGTGC...ATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTGGGAGCGCCAGGCTTTaGTGGTGGCGTCGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: VTAISISTSPAREKATEPGSARL*WWRRRW
Trigger: CCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCC...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTTCCCGCGACACGGCCTaGCATTGGCGGCACACCAGC +
Preference number: 4 (lower is better)
Translates to: VTAISISTSPAREKATEPSRDTA*HWRHTS
Trigger: GCTGGTGTGCCGCCAATGGCAGGCCGTGTCGCGGGA...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR GCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCGATTGGTGGCGGCTaGATGGGGTCGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRAIGGG*MGSATT
Trigger: GGTGGTGGCCGACCCCATGCAGCCGCCACCAATCGC...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGCCAGGAGAAGAAGGTaGGAGGCCGTGGGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QLFIQGPERVVRGHATHSARRRR*EAVGEV
Trigger: CACCTCGCCCACGGCCTCGCACCTTCTTCTCCTGGC...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp AGCACTCGTCGTTGGGCGTGTAGGCGCGGTGCGCACGCAGAGCCCGCCTCACCTTTCCTAAGGCGTAACTaGTATAAGCATCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: STRRWACRRGAHAEPASPFLRRN*YKHLHL
Trigger: GAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA...AGGTGAGGCGGGCTCTGCGTGCGCACCGCGCCTACACGCCCAACGACGAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGCTGTGTACCCCAAGTTaGCCAGGAGGCCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: QLFIQGPERVVRGHATHSLCTPS*PGGRGG
Trigger: GCCCCCTCGGCCTCCTGGGCAACTTGGGGTACACAG...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGTCACAGTGCAGTCCTTaGAGCAGGACGCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVSQCSP*SRTRTG
Trigger: ACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGA...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGTCTGACTCCACATCCTaGAAGGCATTGTTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PAREKATEPGDVLKGSRWSDSTS*KALLSH
Trigger: GTGGCTCAACAATGCCTTCCAGGATGTGGAGTCAGA...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACATCGGGTGGCTTGGTGTaGCCCTGGGCCAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CCQLFIQGPERVVRGHATSGGLV*PWASSS
Trigger: CGAGCTGCTGGCCCAGGGCCACACCAAGCCACCCGA...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGATCGGGTGGCTTGGTGTaGCCCTGGGCCAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRSGGLV*PWASSS
Trigger: CGAGCTGCTGGCCCAGGGCCACACCAAGCCACCCGA...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTGTATGTCTATGACGTaGTCCAGCGCGTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGCMSMT*SSASKK
Trigger: CTTCTTCGACGCGCTGGACCACGTCATAGACATACA...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAATCTCCTCCGCGATTaGTGGCGGCTGCATGGGGTC +
Preference number: 4 (lower is better)
Translates to: CVSVWRGLVVPFLRRNCYNLLRD*WRLHGV
Trigger: GACCCCATGCAGCCGCCACCAATCGCGGAGGAGATT...ATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACAGCAGCTCCTGCTCCTaGGGACTGAAGACCACTGAG +
Preference number: 4 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNSSSCS*GLKTTE
Trigger: CTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGAAGGTGCGAGGCCGTaGGCGAGGTGCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHREGARP*ARCLED
Trigger: GTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTC...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGAAAAGCCACAGAGCCTaGCGATGTCCTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVKSHRA*RCPQGV
Trigger: GACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTT...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACAAGGCCGAGGGGGCCTTaGGCTCCATCTGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: CCQLFIQGPERVVRGHATRPRGP*APSALA
Trigger: GGCCAGTGCAGATGGAGCCCAAGGCCCCCTCGGCCT...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACAGCATCACAGCTGCGTaGGCAGGTTTGTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNSITAA*AGLCVS
Trigger: GCTCACACACAAACCTGCTCACGCAGCTGTGATGCT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAAGGTTTATTCAGGGCCCTaGACGGGTGGTGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: VSVWRGLVVPFLRRNCYKVYSGP*TGGAWT
Trigger: TGTCCACGCACCACCCGTTCAGGGCCCTGAATAAAC...CTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTTCCATCGTGACATTCTaGCCAGGCGGCCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: VTAISISTSPAREKATEPSIVTF*PGGPRP
Trigger: CGGCCGTGGGCCGCCTGGGCAGAATGTCACGATGGA...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR GCA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTCCGGATGAGGAGTTGTaGGGCCCCAGGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: VTAISISTSPAREKATEPPDEEL*GPRNTP
Trigger: GGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGG...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR GCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGGCTGTCGAAGCGGCTaGAGTCGGCCACCATCACCG +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRGCRSG*SRPPSP
Trigger: CGGTGATGGTGGCCGACTGCAGCCGCTTCGACAGCC...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACAACCCAGCACGGGCCCTaGCGTGGTCATCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: CCQLFIQGPERVVRGHATTQHGP*RGHLVW
Trigger: CCACACCAGATGACCACGGCAGGGCCCGTGCTGGGT...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATGCCCTGAACGGGTGGTaGGTGGACATGCAACACACT +
Preference number: 4 (lower is better)
Translates to: CVSVWRGLVVPFLRRNCYALNGW*VDMQHT
Trigger: AGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGC...ATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GTGTCCGTGTATGTCTATGACGTGGTCCAGCGCGTCGAAGAAGGCATCGGAGCCGCCAGCGGCCCTGCCTaGGTTTGTTTTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: VSVYVYDVVQRVEEGIGAASGPA*VCFHCS
Trigger: TGAGCAGTGAAAACAAACGCAGGCAGGGCCGCTGGC...GGCTCCGATGCCTTCTTCGACGCGCTGGACCACGTCATAGACATACACGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp AACAGCCAAACACGTCATAGGGCTTGTTCCGCACGCGGGACAGCAGCGCGAAGGGTGTCATACAGCCGCTaGAACTCCTCGTACCAGGAC +
Preference number: 4 (lower is better)
Translates to: NSQTRHRACSARGTAARRVSYSR*NSSYQD
Trigger: GTCCTGGTACGAGGAGTTCCAGCGGCTGTATGACAC...CCTTCGCGCTGCTGTCCCGCGTGCGGAACAAGCCCTATGACGTGTTTGGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGTGCAGCAGCGAGATaGTCAGGTCGTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNCAAAR*SGRCSR
Trigger: TCTGGAGCAACGACCTGACCATCTCGCTGCTGCACA...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACATGCTCTTGGCGCCTGTaGCACTGCGCTCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CCQLFIQGPERVVRGHATCSWRL*HCARVA
Trigger: AGCCACCCGAGCGCAGTGCCACAGGCGCCAAGAGCA...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGCGTGGTCATCTGGTGTaGCAGGATCTGCTTGATGCC +
Preference number: 4 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCERGHLV*QDLLDA
Trigger: GGCATCAAGCAGATCCTGCCACACCAGATGACCACG...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp TGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATGCGAGTCGTCCTTGTTaGACTGGGAGAACTGGGTGT +
Preference number: 4 (lower is better)
Translates to: CVSVWRGLVVPFLRRNCYASRPC*TGRTGC
Trigger: ACACCCAGTTCTCCCAGTTCAACAAGGACGACTCGC...ATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR TCA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCACCTGGAAGGCATTGTTaGGCCACAGCACCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CCCQLFIQGPERVVRGHAPGRHC*ATAPSR
Trigger: CCTGCTCGGTGCTGTGGCTCAACAATGCCTTCCAGG...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR TCA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACACAGGCCCATGCCGATaGTGTGTCCGTGTATGTCTA +
Preference number: 4 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNTGPCR*CVRVCL
Trigger: TAGACATACACGGACACATCATCGGCATGGGCCTGT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACTTGACCACATCCTCGTaGCGCAGCCTGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: VANCLFRALNGWCVDMQHLTTSS*RSLARQ
Trigger: CTGTCTGGCCAGGCTGCGGCACGAGGATGTGGTCAA...GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGTGAGCAGCAGCTCCTaGTCCTGGGGACTGAAGACC +
Preference number: 4 (lower is better)
Translates to: QLFIQGPERVVRGHATHSVSSSS*SWGLKT
Trigger: GGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCAC...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAAGGTGTCATACAGCCGCTaGAACTCCTCGTACCAGGAC +
Preference number: 4 (lower is better)
Translates to: VSVWRGLVVPFLRRNCYKVSYSR*NSSYQD
Trigger: GTCCTGGTACGAGGAGTTCCAGCGGCTGTATGACAC...CTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp ATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCTCCAGATCTGTTCGTGTGCAGCAGCGAGATaGTCAGGTCGTTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: MSALCSSEMVRSLLQICSCAAAR*SGRCSR
Trigger: TCTGGAGCAACGACCTGACCATCTCGCTGCTGCACA...CGAACAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CCA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGTCTGACTCCACATCCTaGAAGGCATTGTTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVSDSTS*KALLSH
Trigger: GTGGCTCAACAATGCCTTCCAGGATGTGGAGTCAGA...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGACGCGCATGGTGCGTaGGGAGCGCCAGGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRDAHGA*GAPGFD
Trigger: ATCAAAGCCTGGCGCTCCCCACGCACCATGCGCGTC...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp CTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCTCCCAGCTTTGCCTGTaGACTTGCTTGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LFIQGPERVVRGHATHSGSQLCL*TCLLSA
Trigger: GGCAGACAGCAAGCAAGTCCACAGGCAAAGCTGGGA...GCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp TTCCTAAGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCAGCAATCTCGCCGGATaGGGAGTTGTGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FLRRNCYKHLHLSRSGKSSNLAG*GVVRPQ
Trigger: CTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCT...GCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR TCA 90 bp GCCCATGCCGATGATGTGTCCGTGTATGTCTATGACGTGGTCCAGCGCGTCGAACACGTTGACGTTCTCTaGCTCCACATCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AHADDVSVYVYDVVQRVEHVDVL*LHILEG
Trigger: GCCTTCCAGGATGTGGAGTCAGAGAACGTCAACGTG...TTCGACGCGCTGGACCACGTCATAGACATACACGGACACATCATCGGCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTCCTCCCGCATGGTCTTaGGGTCGAACACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VTAISISTSPAREKATEPPPAWS*GRTPAG
Trigger: ACCTGCTGGTGTTCGACCTCAAGACCATGCGGGAGG...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CGAGTCGTCCTTGTTGAACTGGGAGAACTGGGTGTAGCTCCAGTTGTAGGGCCGTGGGAGAAGCTGAGGTaGAGGACCTGGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RVVLVELGELGVAPVVGPWEKLR*RTWSVC
Trigger: ACACACAGACCAGGTCCTGCACCTCAGCTTCTCCCA...CGGCCCTACAACTGGAGCTACACCCAGTTCTCCCAGTTCAACAAGGACGACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR GCA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTCCTCCTCGTTGTCGCTaGCCAGGTCAAAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: VTAISISTSPAREKATEPPPRCR*PGQRCG
Trigger: GCCGCATCTTTGACCTGGGCAGCGACAACGAGGAGG...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCACCTTGGTCTCTAGCATaGGCTCCGACAGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: CCCQLFIQGPERVVRGHAPWSLA*APTAVA
Trigger: AGCCACAGCTGTCGGAGCGCATGCTAGAGACCAAGG...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAGCCCTGAACGGGTGGTaGGTGGACATGCAACACACT +
Preference number: 4 (lower is better)
Translates to: CCCQLFIQGPERVVRGHAALNGW*VDMQHT
Trigger: AGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGC...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACAGCTGGCCAGCGGCCCTaGCTGCGTTTGTTTTCACTG +
Preference number: 4 (lower is better)
Translates to: CCQLFIQGPERVVRGHATAGQRP*LRLFSL
Trigger: CAGTGAAAACAAACGCAGGCAGGGCCGCTGGCCAGC...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR GCA 90 bp CTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCTGGTGTGGCAGGATCTaGTTGATGCCTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LFIQGPERVVRGHATHSGWCGRI*LMPQWC
Trigger: ACACCACTGAGGCATCAAGCAGATCCTGCCACACCA...GCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CCA 90 bp TTCCTAAGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCAGAAGCACTCGTCGTTaGGCGTGTAGGCGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: FLRRNCYKHLHLSRSGKSRSTRR*ACRRGA
Trigger: CGCACCGCGCCTACACGCCCAACGACGAGTGCTTCT...GCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGTGTACCGATCTGGTGTaGGGAGTAGGTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QLFIQGPERVVRGHATHSCTDLV*GVGEAA
Trigger: GGCTGCCTCACCTACTCCCCACACCAGATCGGTACA...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp GTCCTTGTTGAACTGGGAGAACTGGGTGTAGCTCCAGTTGTAGGGCCGCATGTCGCGAGTCGTCCTTGTTaGACTGGGAGAACTGGGTGT +
Preference number: 4 (lower is better)
Translates to: VLVELGELGVAPVVGPHVASRPC*TGRTGC
Trigger: ACACCCAGTTCTCCCAGTTCAACAAGGACGACTCGC...GACATGCGGCCCTACAACTGGAGCTACACCCAGTTCTCCCAGTTCAACAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR TCA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCACACGTTGACGTTCTCTaGCTCCACATCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CCCQLFIQGPERVVRGHAHVDVL*LHILEG
Trigger: GCCTTCCAGGATGTGGAGTCAGAGAACGTCAACGTG...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GTCGTCCTTGTTGAACTGGGAGAACTGGGTGTAGCTCCAGTTGTAGGGCCGCATATATCTCCGATGCGGTaGAGGTTCCCCGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: VVLVELGELGVAPVVGPHISPMR*RFPEMR
Trigger: CCTCATCTCGGGGAACCTGCACCGCATCGGAGATAT...ATGCGGCCCTACAACTGGAGCTACACCCAGTTCTCCCAGTTCAACAAGGACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR GCA 90 bp TTCCTAAGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCGGTGGTGCGTGGACATaGAACACACTCGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: FLRRNCYKHLHLSRSGKSGGAWT*NTLGPT
Trigger: TGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACC...GCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TTCCTAAGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCTCAGCGCCTCTGGCTaGCAAGCCAGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLRRNCYKHLHLSRSGKSLSASG*QARRRR
Trigger: CCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAG...GCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TTCCTAAGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCAGGGCCCTGAACGGGTaGTGCGTGGACATGCAACAC +
Preference number: 4 (lower is better)
Translates to: FLRRNCYKHLHLSRSGKSRALNG*CVDMQH
Trigger: GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCT...GCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp CGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTGGTGTGGCAGGATCTaGTTGATGCCGATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RNCYKHLHLSRSGKSHRAWCGRI*LMPIWC
Trigger: ACACCAGATCGGCATCAAGCAGATCCTGCCACACCA...GGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAAACTGGTACCCGGAATaGGAGAAGCTGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRNWYPE*EKLRCR
Trigger: CCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTT...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAAAAAGCCACAGAGCCTaGCGATGTCCTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRKSHRA*RCPQGV
Trigger: GACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTT...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGATGCTTGATGCCTCAGTaGTGTCTCTGGGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRCLMPQ*CLWGCE
Trigger: CTCACAGCCCCAGAGACACCACTGAGGCATCAAGCA...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR TCA 90 bp TTCCTAAGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCGGGACTGAAGACCACTaGGTTGACCACATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: FLRRNCYKHLHLSRSGKSGTEDH*VDHILV
Trigger: CACGAGGATGTGGTCAACTCAGTGGTCTTCAGTCCC...GCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTTCCAGATCTTCACAGTaGAGTCCTTGGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: VTAISISTSPAREKATEPSRSSQ*SPWSRT
Trigger: CGTCCTGCTCCAAGGACTGCACTGTGAAGATCTGGA...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR GCA 90 bp GTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACAGATGGTCAGGTCGTTaGTCCAGATCTTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: VANCLFRALNGWCVDMQHRWSGR*SRSSQC
Trigger: GCACTGTGAAGATCTGGAGCAACGACCTGACCATCT...GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR GCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCAAGCATCACAGCTaGGTGAGCAGGTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRAKHHS*VSRFVC
Trigger: ACACACAAACCTGCTCACGCAGCTGTGATGCTTGGC...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp GTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACCTGGCATTGAGGTTCTaGATCTTGAACAGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: VANCLFRALNGWCVDMQHLALRF*ILNSRF
Trigger: GAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAG...GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CCA 90 bp TTCCTAAGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCGTGGTCATCTGGTGTaGCAGGATCTGCTTGATGCC +
Preference number: 4 (lower is better)
Translates to: FLRRNCYKHLHLSRSGKSRGHLV*QDLLDA
Trigger: GGCATCAAGCAGATCCTGCCACACCAGATGACCACG...GCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR GCA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGATTCCTAAGGCGTAACTaGTATAAGCATCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRFLRRN*YKHLHL
Trigger: GAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS GCA 90 bp TCCGCCGAGAGGAAGCTCGGGGCGGCCAGGCAGTGGCCTCCGCCCTaGGGCCCTGGAGCAGCTCTGCCCGGCGGGCTCGGGGCGGACGGC +
Preference number: 5 (lower is better)
Translates to: SAERKLGAARQWPPP*GPGAALPGGLGADG
Trigger: GCCGTCCGCCCCGAGCCCGCCGGGCAGAGCTGCTCCAGGGCCGCAGGGCGGAGGCCACTGCCTGGCCGCCCCGAGCTTCCTCTCGGCGGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443788.1
CDS TCA 90 bp AGACCAGGCTGTCGGGGAGCAGGGGCGTGCCGCCCTCGTCCATCGTaGCATTCTGCCCAGGCGGCCCACGGCCGCCTCCGCCCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: RPGCRGAGACRPRPS*HSAQAAHGRLRPLR
Trigger: GCGCAGCGGGCGGAGGCGGCCGTGGGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCGGCACGCCCCTGCTCCCCGACAGCCTGGTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000459905.5
ENST00000483559.5
ENST00000491246.4
CDS GCA 90 bp GACAGCTGTGGCTGCGCCCGCCCCTCCAGCACGCGGTCCAGAAAGTaGCGCAAGCCCTCCTTGGCGTGGGCGGGGGCCGGGCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: DSCGCARPSSTRSRK*RKPSLAWAGAGPAT
Trigger: GGTGGCTGGCCCGGCCCCCGCCCACGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGTGCTGGAGGGGCGGGCGCAGCCACAGCTGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS GCA 90 bp TGGCGTGGGCGGGGGCCGGGCCAGCCACCACCTCCTCGTTGTCGCTaGCCAGGTCAAAGATGCGGCAGGGGGACGTGGCCGGGTCACCGG +
Preference number: 5 (lower is better)
Translates to: WRGRGPGQPPPPRCR*PGQRCGRGTWPGHR
Trigger: CCGGTGACCCGGCCACGTCCCCCTGCCGCATCTTTGACCTGGGCAGCGACAACGAGGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CCA 90 bp CCCGCCCCTCCAGCACGCGGTCCAGAAAGTGCCGCAAGCCCTCCTTaGCGTGGGCGGGGGCCGGGCCAGCCACCACCTCCTCGTTGTCGC +
Preference number: 5 (lower is better)
Translates to: PAPPARGPESAASPP*RGRGPGQPPPPRCR
Trigger: GCGACAACGAGGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGTGCTGGAGGGGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CCA 90 bp AACTGCTCCCTCCACAGGAACTCGTCCCGCGACACGGCCTGCCATTaGCGGCACACCAGCCCGGCGGCCAGCACGTCGGCCGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: NCSLHRNSSRDTACH*RHTSPAASTSAGPR
Trigger: CCTGGGCCCGGCCGACGTGCTGGCCGCCGGGCTGGTGTGCCGCCAATGGCAGGCCGTGTCGCGGGACGAGTTCCTGTGGAGGGAGCAGTT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS CCA 90 bp CCCTCCAGCACGCGGTCCAGAAAGTGCCGCAAGCCCTCCTTGGCGTaGGCGGGGGCCGGGCCAGCCACCACCTCCTCGTTGTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PSSTRSRKCRKPSLA*AGAGPATTSSLSLP
Trigger: GGGCAGCGACAACGAGGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGTGCTGGAGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS-3UTR CAA 90 bp GTGGCGGTCCCAGATGTAGCCGTGCCGGTCCTCCGCCCCGCTGGCCACGAAGTCCTGCGCTCGGGTGGCTaGGTGTGGCCCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VAVPDVAVPVLRPAGHEVLRSGG*VWPWAS
Trigger: GCTGGCCCAGGGCCACACCAAGCCACCCGAGCGCAG...GACTTCGTGGCCAGCGGGGCGGAGGACCGGCACGGCTACATCTGGGACCGCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS TCA 90 bp GGGCGTGCCGCCCTCGTCCATCGTGACATTCTGCCCAGGCGGCCCTaGAACCCACCAACGGCTGCCCTCAGCCCAGGCCCGGGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: GRAALVHRDILPRRP*NPPTAALSPGPGRE
Trigger: CTCCCTTCCCGGGCCTGGGCTGAGGGCAGCCGTTGGTGGGTTTCAGGGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCGGCACGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443788.1
ENST00000480818.3
CDS GCA 90 bp TGGTGTGGCCCTGGGCCAGCAGCTCGGCCACCTTGGTCTCTAGCATaGGCTCCGACAGCTGTGGCTGCGCCCGCCCCTCCAGCACGCGGT +
Preference number: 5 (lower is better)
Translates to: WCGPGPAARPPWSLA*APTAVAAPAPPARG
Trigger: ACCGCGTGCTGGAGGGGCGGGCGCAGCCACAGCTGTCGGAGCGCATGCTAGAGACCAAGGTGGCCGAGCTGCTGGCCCAGGGCCACACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS GCA 90 bp CTGTCGGGGAGCAGGGGCGTGCCGCCCTCGTCCATCGTGACATTCTaGCCAGGCGGCCCTGAAACCCACCAACGGCTGCCCTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LSGSRGVPPSSIVTF*PGGPETHQRLPSAQ
Trigger: CTGGGCTGAGGGCAGCCGTTGGTGGGTTTCAGGGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCGGCACGCCCCTGCTCCCCGACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443788.1
ENST00000480818.3
CDS-3UTR CAA 90 bp ATCTCGCCGGATGAGGAGTTGTGCGGCCCCAGGAACACCCCCGAGGCCAGCAGTCGACACGGCCTGCCATaGGCGGCACACCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: ISPDEELCGPRNTPEASSRHGLP*AAHQPG
Trigger: GCCGGGCTGGTGTGCCGCCAATGGCAGGCCGTGTCG...ACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CAA 90 bp GCGTGGGGAGCGCCAGGCTTTGATGGTGGCGTCGTCGCTGGCCGTGAGCAGCAGGGGGAGCGCCAGGCTTaGATGGTGGCGTCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: AWGAPGFDGGVVAGREQQGERQA*MVASSL
Trigger: CAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCC...CTGCTGCTCACGGCCAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCCACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp GGCGTCGTCGCTGGCCGTGAGCAGCAGCTCCTGCTCCTGGGGACTGAAGACCACGAGGCCGAGGGGGCCTaGGGCTCCATCTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: GVVAGREQQLLLLGTEDHEAEGA*GSICTG
Trigger: GCCAGTGCAGATGGAGCCCAAGGCCCCCTCGGCCTC...GTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCACGGCCAGCGACGACGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS TCA 90 bp AGACCAGGCTGTCGGGGAGCAGGGGCGTGCCGCCCTCGTCCATCGTaGCATTCTGCCCAGGCGGCCCTGAAACCCACCAACGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: RPGCRGAGACRPRPS*HSAQAALKPTNGCP
Trigger: AGGGCAGCCGTTGGTGGGTTTCAGGGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCGGCACGCCCCTGCTCCCCGACAGCCTGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443788.1
ENST00000480818.3
CDS GCA 90 bp AGCTCGGCCACCTTGGTCTCTAGCATGCGCTCCGACAGCTGTGGCTaGGCCCGCCCCTCCAGCACGCGGTCCAGAAAGTGCCGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SSATLVSSMRSDSCG*ARPSSTRSRKCRKP
Trigger: GGGCTTGCGGCACTTTCTGGACCGCGTGCTGGAGGGGCGGGCGCAGCCACAGCTGTCGGAGCGCATGCTAGAGACCAAGGTGGCCGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS-3UTR CAA 90 bp GAAGGCATCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTGCCGTGGTCATCTGGCCACCACCTCCTCGTaGTCGCTGCCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: EGIGAPALTQHGPCRGHLATTSS*SLPRSK
Trigger: CTTTGACCTGGGCAGCGACAACGAGGAGGTGGTGGC...CAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGATGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCGAGGCCGAGGGGGCCTaGGGCTCCATCTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGEAEGA*GSICTG
Trigger: GCCAGTGCAGATGGAGCCCAAGGCCCCCTCGGCCTC...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGCCCTGTGTACCCCAAGTaGCCCAGGAGGCCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GGLGLHLHWPPRAKHHSCPVYPK*PRRPRG
Trigger: CCCCCTCGGCCTCCTGGGCAACTTGGGGTACACAGG...GCAGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS GCA 90 bp ACAGGCTGTCGGCGTGGGGCGGGGGCAGGGTCAACCCGCCGCCCGTaGTCACCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: TGCRRGAGAGSTRRP*SPRLMTAISPDEEL
Trigger: CAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGGTGAGCACGGGCGGCGGGTTGACCCTGCCCCCGCCCCACGCCGACAGCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459905.5
ENST00000480818.3
CDS CCA 90 bp CGCAGCGTCTGCACCTCCACGCAGGGCACCGTGTCATACAGCCGCTaGAACTCCTCGTACCAGGACATGGCCGCTGGGTGTCGGGGCACG +
Preference number: 5 (lower is better)
Translates to: RSVCTSTQGTVSYSR*NSSYQDMAAGCRGT
Trigger: CGTGCCCCGACACCCAGCGGCCATGTCCTGGTACGAGGAGTTCCAGCGGCTGTATGACACGGTGCCCTGCGTGGAGGTGCAGACGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS CCA 90 bp CCTCCTCGTTGTCGCTGCCCAGGTCAAAGATGCGGCAGGGGGACGTaGCCGGGTCACCGGCTTCCAGCAGCAGGTCAGGGCTGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: PPRCRCPGQRCGRGT*PGHRLPAAGQGCRS
Trigger: GCTTCGACAGCCCTGACCTGCTGCTGGAAGCCGGTGACCCGGCCACGTCCCCCTGCCGCATCTTTGACCTGGGCAGCGACAACGAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS-3UTR CAA 90 bp TCTGGGGCTGTGAGCACCACAGAGGTCCGTGGGCACTGCCTGCTCCGGGGGCCCACCTCCCGCATGGTCTaGAGGTCGAACACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SGAVSTTEVRGHCLLRGPTSRMV*RSNTSR
Trigger: CCTGCTGGTGTTCGACCTCAAGACCATGCGGGAGGT...GGGCCCCCGGAGCAGGCAGTGCCCACGGACCTCTGTGGTGCTCACAGCCCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp GAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTGACCGGGGGGAGCGCCAGGCTTaGATGGTGGCGTCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: ERVVRGHATHSGPQQRDRGERQA*MVASSL
Trigger: CAGCGACGACGCCACCATCAAAGCCTGGCGCTCCCC...CCGGTCACGCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCACCCCTAGCCTGGGGTaGAGTGAGGAGCGGCACCCC +
Preference number: 5 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGTPSLG*SEERHP
Trigger: GGGGTGCCGCTCCTCACTCAACCCCAGGCTAGGGGT...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS CCA 90 bp TACTTGCTCTTGGCGCCTGTGGCACTGCGCTCGGGTGGCTTGGTGTaGCCCTGGGCCAGCAGCTCGGCCACCTTGGTCTCTAGCATGCGC +
Preference number: 5 (lower is better)
Translates to: YLLLAPVALRSGGLV*PWASSSATLVSSMR
Trigger: GCGCATGCTAGAGACCAAGGTGGCCGAGCTGCTGGCCCAGGGCCACACCAAGCCACCCGAGCGCAGTGCCACAGGCGCCAAGAGCAAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325285.8
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CCA 90 bp TTGATGCTCTTGGCGCCTGTGGCACTGCGCTCGGGTGGCTTGGTGTaGCCCTGGGCCAGCAGCTCGGCCACCTTGGTCTCTAGCATGCGC +
Preference number: 5 (lower is better)
Translates to: LMLLAPVALRSGGLV*PWASSSATLVSSMR
Trigger: GCGCATGCTAGAGACCAAGGTGGCCGAGCTGCTGGCCCAGGGCCACACCAAGCCACCCGAGCGCAGTGCCACAGGCGCCAAGAGCATCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459905.5
CDS-3UTR CAA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGGCCACCACCGCACCGTaGGGCCAGGCGCGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCEATTAP*GQARLF
Trigger: GAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGC...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GTGGCGGTCCCAGATGTAGCCGTGCCGGTCCTCCGCCCCGCTGGCCACGAAGTCGCTTTGCCTGTGGACTaGCTTGCTGTCTGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: VAVPDVAVPVLRPAGHEVALPVD*LAVCPS
Trigger: TGAGGGGCAGACAGCAAGCAAGTCCACAGGCAAAGC...GACTTCGTGGCCAGCGGGGCGGAGGACCGGCACGGCTACATCTGGGACCGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp CCCGCTGGCCACGAAGTCCCTGCTGACGTCCAGGAAGATGAAGAAGCACTCGTCAGGCCCGTCGGTTGCTaGCTGGCCAGCGGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PAGHEVPADVQEDEEALVRPVGC*LASGPA
Trigger: GGCAGGGCCGCTGGCCAGCAAGCAACCGACGGGCCT...GACGAGTGCTTCTTCATCTTCCTGGACGTCAGCAGGGACTTCGTGGCCAGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp CACCGTTGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCGACAAATCAGGCCCGTCGGTaGCTTGCTGGCCAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: HRWARRGCSRTGTCCRATNQARR*LAGQRP
Trigger: GGGCCGCTGGCCAGCAAGCAACCGACGGGCCTGATT...TGTCGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS GCA 90 bp GTCGAAGAAGGCATCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTaGCGTGGTCATCTGGTGTGGCAGGATCTGCTTGATGCCGATCTG +
Preference number: 5 (lower is better)
Translates to: VEEGIGAPALTQHGP*RGHLVWQDLLDADL
Trigger: CAGATCGGCATCAAGCAGATCCTGCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGATGCCTTCTTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325285.8
ENST00000480818.3
ENST00000483559.5
CDS GCA 90 bp GTCGAAGAAGGCATCGGAGCCCCGGCCCTCACCCAGCACGGGCCCTaGCGTGGTCATCTGGTGTGGCAGGATCTGCTTGATGCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: VEEGIGAPALTQHGP*RGHLVWQDLLDALG
Trigger: GCCAAGAGCATCAAGCAGATCCTGCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCGGGGCTCCGATGCCTTCTTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459905.5
CDS-3UTR CAA 90 bp AAGAAGGTGCGAGGCCGTGGGCGAGGTGCCTGGAGGACGCGCATGGTGCGTGGGTCCTGGAAGGCATTGTaGAGCCACAGCACCGAGCAG +
Preference number: 5 (lower is better)
Translates to: KKVRGRGRGAWRTRMVRGSWKAL*SHSTEQ
Trigger: CTGCTCGGTGCTGTGGCTCAACAATGCCTTCCAGGA...CCCACGCACCATGCGCGTCCTCCAGGCACCTCGCCCACGGCCTCGCACCTTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp GAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCCACAGCAGCGTGACCGGAGCAGCTCGGCCACCTaGGTCTCTAGCATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: ERVVRGHATHSGPQQRDRSSSAT*VSSMRS
Trigger: GGAGCGCATGCTAGAGACCAAGGTGGCCGAGCTGCT...CCGGTCACGCTGCTGTGGGCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp CTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCCTGCGCTCGGGTGGCTaGGTGTGGCCCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LFIQGPERVVRGHATHSGLRSGG*VWPWAS
Trigger: GCTGGCCCAGGGCCACACCAAGCCACCCGAGCGCAG...GCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp CTCAGCGCCTCTGGCTGGCAAGCCAGGAGAAGAAGGTGCGAGGCCGTGGGCGAGACGTACAGGTACCTGTaGTCGGGCGACAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: LSASGWQARRRRCEAVGETYRYL*SGDRPM
Trigger: CATGGGCCTGTCGCCCGACAACAGGTACCTGTACGT...CTCGCCCACGGCCTCGCACCTTCTTCTCCTGGCTTGCCAGCCAGAGGCGCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS TCA 90 bp GAGGTTCTGGATCTTGAACAGCCGCTTCACCACGTTGACGTTCTCTaGCTCCACATCCTGGGGGCGGGGGCACGTGCCAGGTGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: EVLDLEQPLHHVDVL*LHILGAGARARWAP
Trigger: CGGCGCCCACCTGGCACGTGCCCCCGCCCCCAGGATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483559.5
CDS CCA 90 bp GACGCGAACTGGTACCCGGAATGGGAGAAGCTGAGGTGCAGGACCTaGTCTGTGTGTTCCCGCAGCGTCTGCACCTCCACGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: DANWYPEWEKLRCRT*SVCSRSVCTSTQGT
Trigger: GGTGCCCTGCGTGGAGGTGCAGACGCTGCGGGAACACACAGACCAGGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS-3UTR CAA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGTCGCCGGATGAGGAGTaGTGCGGCCCCAGGAACACC +
Preference number: 5 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVSPDEE*CGPRNT
Trigger: GGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGA...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CAA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACACCCCTAGCCTGGGGTaGAGTGAGGAGCGGCACCCC +
Preference number: 5 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNTPSLG*SEERHP
Trigger: GGGGTGCCGCTCCTCACTCAACCCCAGGCTAGGGGT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS GCA 90 bp GAGAAGCTGAGGTGCAGGACCTGGTCTGTGTGTTCCCGCAGCGTCTaGACCTCCACGCAGGGCACCGTGTCATACAGCCGCTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: EKLRCRTWSVCSRSV*TSTQGTVSYSRWNS
Trigger: GGAGTTCCAGCGGCTGTATGACACGGTGCCCTGCGTGGAGGTGCAGACGCTGCGGGAACACACAGACCAGGTCCTGCACCTCAGCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS GCA 90 bp TGCTCACCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTTGTaGGGCCCCAGGAACACCCCCGAGGCCAGCAGTAGCGAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: CSPRLMTAISPDEEL*GPRNTPEASSSESS
Trigger: GGACGACTCGCTACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGGTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459905.5
ENST00000480818.3
CDS CCA 90 bp GGACCGAGGCGGGCAGCATGGCGGCAGGGGTGTACCGATCTGGTGTaGGGAGTAGGTGAGGCAGCCAGTGGTGAAGATGAGGTACTTGCT +
Preference number: 5 (lower is better)
Translates to: GPRRAAWRQGCTDLV*GVGEAASGEDEVLA
Trigger: AGCAAGTACCTCATCTTCACCACTGGCTGCCTCACCTACTCCCCACACCAGATCGGTACACCCCTGCCGCCATGCTGCCCGCCTCGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGGCCACCACCTCCTCGTaGTCGCTGCCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVATTSS*SLPRSK
Trigger: CTTTGACCTGGGCAGCGACAACGAGGAGGTGGTGGC...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCCTGAAGACCACTGAGTaGACCACATCCTCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGLKTTE*TTSSCR
Trigger: GCGGCACGAGGATGTGGTCAACTCAGTGGTCTTCAG...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTGAAGACCACTGAGTaGACCACATCCTCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: PAREKATEPGDVLKGSRWLKTTE*TTSSCR
Trigger: GCGGCACGAGGATGTGGTCAACTCAGTGGTCTTCAG...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACGACACGGCCTGCCATaGGCGGCACACCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: CCQLFIQGPERVVRGHATRHGLP*AAHQPG
Trigger: GCCGGGCTGGTGTGCCGCCAATGGCAGGCCGTGTCG...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CAA 90 bp TTGTTCCGCACGCGGGACAGCAGCGCGAAGGAGTCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTaGTGCGGCCCCAGGAACACC +
Preference number: 5 (lower is better)
Translates to: LFRTRDSSAKESRLMTAISPDEE*CGPRNT
Trigger: GGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGA...GATTGCTGTCATCAGCCTAGACTCCTTCGCGCTGCTGTCCCGCGTGCGGAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CAA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGAGCCGCTTCACCACGTaGACGTTCTCTGACTCCACA +
Preference number: 5 (lower is better)
Translates to: PAREKATEPGDVLKGSRWSRFTT*TFSDST
Trigger: TGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCT...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp TGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACAGCCACCACCGCACCGTaGGGCCAGGCGCGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: CCQLFIQGPERVVRGHATATTAP*GQARLF
Trigger: GAACAGCCGCGCCTGGCCCAACGGTGCGGTGGTGGC...TGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GCCCATGCCGATGATGTGTCCGTGTATGTCTATGACGTGGTCCAGCGCGTCGAACCTGTGTACCCCAAGTaGCCCAGGAGGCCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: AHADDVSVYVYDVVQRVEPVYPK*PRRPRG
Trigger: CCCCCTCGGCCTCCTGGGCAACTTGGGGTACACAGG...TTCGACGCGCTGGACCACGTCATAGACATACACGGACACATCATCGGCATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp ATCTCGCCGGATGAGGAGTTGTGCGGCCCCAGGAACACCCCCGAGGCCAGCAGTGAGATGGTCAGGTCGTaGCTCCAGATCTGTTCGGCA +
Preference number: 5 (lower is better)
Translates to: ISPDEELCGPRNTPEASSEMVRS*LQICSA
Trigger: TGCCGAACAGATCTGGAGCAACGACCTGACCATCTC...ACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CAA 90 bp CACCGTTGGGCCAGGCGCGGCTGTTCACGTACAGGTACCTGTTGTCGGGCGACACGGCCCTGCCTGCGTTaGTTTTCACTGCTCATCCCA +
Preference number: 5 (lower is better)
Translates to: HRWARRGCSRTGTCCRATRPCLR*FSLLIP
Trigger: TGGGATGAGCAGTGAAAACAAACGCAGGCAGGGCCG...TGTCGCCCGACAACAGGTACCTGTACGTGAACAGCCGCGCCTGGCCCAACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTGTGGCAGGATCTGCTaGATGCCTCAGTGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGCGRIC*MPQWCL
Trigger: GAGACACCACTGAGGCATCAAGCAGATCCTGCCACA...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS CCA 90 bp GGGGCCTGCTACTTCACAGTGCAGTCCTTGGAGCAGGACGCGAACTaGTACCCGGAATGGGAGAAGCTGAGGTGCAGGACCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: GACYFTVQSLEQDAN*YPEWEKLRCRTWSV
Trigger: CACAGACCAGGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAAGTAGCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CAA 90 bp GAGGGGGCCTTGGGCTCCATCTGCACTGGCCACCCCGTGCCAAGCATCACAGCTGAGATGGTCAGGTCGTaGCTCCAGATCTTCACAGTG +
Preference number: 5 (lower is better)
Translates to: EGALGSICTGHPVPSITAEMVRS*LQIFTV
Trigger: CACTGTGAAGATCTGGAGCAACGACCTGACCATCTC...AGCTGTGATGCTTGGCACGGGGTGGCCAGTGCAGATGGAGCCCAAGGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CAA 90 bp CCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTTGAGGTTCTGGATCTaGAACAGCCGCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: PLGKKPQSLAMSSRGPGGLRFWI*NSRFTT
Trigger: CGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAA...GCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp CCCGCTCGGGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGTTGAGGTTCTGGATCTaGAACAGCCGCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: PAREKATEPGDVLKGSRWLRFWI*NSRFTT
Trigger: CGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAA...CCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCCCGAGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp TGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAGCAGCTCGGCCACCTaGGTCTCTAGCATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: CVSVWRGLVVPFLRRNCYSSSAT*VSSMRS
Trigger: GGAGCGCATGCTAGAGACCAAGGTGGCCGAGCTGCT...ATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACATGAGGTACTTGCTCTaGGCGCCTGTGGCACTGCGC +
Preference number: 5 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNMRYLL*APVALR
Trigger: GCGCAGTGCCACAGGCGCCAAGAGCAAGTACCTCAT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGTGTGGCAGGATCTGCTaGATGCCGATCTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVCGRIC*MPIWCG
Trigger: CCCACACCAGATCGGCATCAAGCAGATCCTGCCACA...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CAA 90 bp TGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATCAATCTCCTCCGCGATaGGTGGCGGCTGCATGGGGT +
Preference number: 5 (lower is better)
Translates to: CVSVWRGLVVPFLRRNCYQSPPR*VAAAWG
Trigger: ACCCCATGCAGCCGCCACCAATCGCGGAGGAGATTG...ATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS CCA 90 bp TTCACAGTGCAGTCCTTGGAGCAGGACGCGAACTGGTACCCGGAATaGGAGAAGCTGAGGTGCAGGACCTGGTCTGTGTGTTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: FTVQSLEQDANWYPE*EKLRCRTWSVCSRS
Trigger: GCTGCGGGAACACACAGACCAGGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS CCA 90 bp AGCTCCAGTTGTAGGGCCGCATGTCCGCGCTGTGCAGCAGCGAGATaGTCAGGTCGTTGCTCCAGATCTTCACAGTGCAGTCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: SSSCRAACPRCAAAR*SGRCSRSSQCSPWS
Trigger: GCTCCAAGGACTGCACTGTGAAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGGCCCTACAACTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
CDS-3UTR CAA 90 bp CACTGGCCACCCCGTGCCAAGCATCACAGCTGCGTGAGCAGGTTTGTGTGTGAGTCCTGGAAGGCATTGTaGAGCCACAGCACCGAGCAG +
Preference number: 5 (lower is better)
Translates to: HWPPRAKHHSCVSRFVCESWKAL*SHSTEQ
Trigger: CTGCTCGGTGCTGTGGCTCAACAATGCCTTCCAGGA...CTCACACACAAACCTGCTCACGCAGCTGTGATGCTTGGCACGGGGTGGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GTGTCCGTGTATGTCTATGACGTGGTCCAGCGCGTCGAAGAAGGCATCGGAGCCTGCCTGTGGACTTGCTaGCTGTCTGCCCCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: VSVYVYDVVQRVEEGIGACLWTC*LSAPQD
Trigger: GTCCTGAGGGGCAGACAGCAAGCAAGTCCACAGGCA...GGCTCCGATGCCTTCTTCGACGCGCTGGACCACGTCATAGACATACACGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS CCA 90 bp CAGTCGGCCACCATCACCGTGCGGACGGTGCTGGCATTGAGGTTCTaGATCTTGAACAGCCGCTTCACCACGTTGACGTTCTCTGACTCC +
Preference number: 5 (lower is better)
Translates to: QSATITVRTVLALRF*ILNSRFTTLTFSDS
Trigger: GGAGTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAGCACCGTCCGCACGGTGATGGTGGCCGACTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CCA 90 bp GTAGTGATCGCCTTCACAGTGCAGTCCTTGGAGCAGGACGCGAACTaGTACCCGGAATGGGAGAAGCTGAGGTGCAGGACCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: VVIAFTVQSLEQDAN*YPEWEKLRCRTWSV
Trigger: CACAGACCAGGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAAGGCGATCACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428398.5
CDS-3UTR CAA 90 bp TTGTTCCGCACGCGGGACAGCAGCGCGAAGGAGTCTAGGCTGATGACAGCAATCTTCACAGTGCAGTCCTaGGAGCAGGACGCGAACTGG +
Preference number: 5 (lower is better)
Translates to: LFRTRDSSAKESRLMTAIFTVQS*EQDANW
Trigger: CCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAA...GATTGCTGTCATCAGCCTAGACTCCTTCGCGCTGCTGTCCCGCGTGCGGAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CAA 90 bp CGCATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCTCCAGATCTGTAGCGAGTCGTCCTTGTaGAACTGGGAGAACTGGGTG +
Preference number: 5 (lower is better)
Translates to: RMSALCSSEMVRSLLQICSESSL*NWENWV
Trigger: CACCCAGTTCTCCCAGTTCAACAAGGACGACTCGCT...ACAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CAA 90 bp GGAAAAAGCCACAGAGCCTGGCGATGTCCTCAAGGGGTCCCGGTGGCTCCAGTGAGTAGCGAGTCGTCCTaGTTGAACTGGGAGAACTGG +
Preference number: 5 (lower is better)
Translates to: GKSHRAWRCPQGVPVAPVSSESS*LNWENW
Trigger: CCAGTTCTCCCAGTTCAACAAGGACGACTCGCTACT...CACTGGAGCCACCGGGACCCCTTGAGGACATCGCCAGGCTCTGTGGCTTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CAA 90 bp CCGCATGTCCGCGCTGTGCAGCAGCGAGATGGTCAGGTCGTTGCTCCAGATCTGAGTAGCGAGTCGTCCTaGTTGAACTGGGAGAACTGG +
Preference number: 5 (lower is better)
Translates to: PHVRAVQQRDGQVVAPDLSSESS*LNWENW
Trigger: CCAGTTCTCCCAGTTCAACAAGGACGACTCGCTACT...CAGATCTGGAGCAACGACCTGACCATCTCGCTGCTGCACAGCGCGGACATGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS-3UTR CAA 90 bp GGTTTGTGTGTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACAGCCGCTTCACCACGTaGACGTTCTCTGACTCCACA +
Preference number: 5 (lower is better)
Translates to: GLCVSVWRGLVVPFLRRNSRFTT*TFSDST
Trigger: TGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCT...GTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCACACACAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS CCA 90 bp TTGCTCCAGATCTTCACAGTGCAGTCCTTGGAGCAGGACGCGAACTaGTACCCGGAATGGGAGAAGCTGAGGTGCAGGACCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLQIFTVQSLEQDAN*YPEWEKLRCRTWSV
Trigger: CACAGACCAGGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAAGATCTGGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
CDS-3UTR CAA 90 bp GTGAGCGTGTGGCGGGGCCTGGTTGTCCCCTTCCTAAGGCGTAACTGCTATAAGCGGACGGTGCTGGCATaGAGGTTCTGGATCTTGAAC +
Preference number: 5 (lower is better)
Translates to: VSVWRGLVVPFLRRNCYKRTVLA*RFWILN
Trigger: GTTCAAGATCCAGAACCTCAATGCCAGCACCGTCCG...CTTATAGCAGTTACGCCTTAGGAAGGGGACAACCAGGCCCCGCCACACGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp CTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGGGCGTGAAGATGAGGTACTaGCTCTTGGCGCCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LFIQGPERVVRGHATHSGVKMRY*LLAPVA
Trigger: TGCCACAGGCGCCAAGAGCAAGTACCTCATCTTCAC...GCCCGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GTGAGCAGCAGCTCCTGCTCCTGGGGACTGAAGACCACTGAGTTGACCACATCCGTGAAGATGAGGTACTaGCTCTTGGCGCCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: VSSSSCSWGLKTTELTTSVKMRY*LLAPVA
Trigger: TGCCACAGGCGCCAAGAGCAAGTACCTCATCTTCAC...GGATGTGGTCAACTCAGTGGTCTTCAGTCCCCAGGAGCAGGAGCTGCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS-3UTR CAA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGACGTACAGGTACCTGTaGTCGGGCGACAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: QLFIQGPERVVRGHATHSTYRYL*SGDRPM
Trigger: CATGGGCCTGTCGCCCGACAACAGGTACCTGTACGT...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACCTCCCGCATGGTCTaGAGGTCGAACACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VANCLFRALNGWCVDMQHTSRMV*RSNTSR
Trigger: CCTGCTGGTGTTCGACCTCAAGACCATGCGGGAGGT...GTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp CAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCAACACACTCGTTCACAGTGCAGTCCTaGGAGCAGGACGCGAACTGG +
Preference number: 5 (lower is better)
Translates to: QLFIQGPERVVRGHATHSFTVQS*EQDANW
Trigger: CCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAA...CGAGTGTGTTGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS-3UTR CAA 90 bp AGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAATGAGGTACTTGCTCTaGGCGCCTGTGGCACTGCGC +
Preference number: 5 (lower is better)
Translates to: RRNCYKHLHLSRSGKSHRMRYLL*APVALR
Trigger: GCGCAGTGCCACAGGCGCCAAGAGCAAGTACCTCAT...TCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp TTCCTAAGGCGTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCAATCTCCTCCGCGATaGGTGGCGGCTGCATGGGGT +
Preference number: 5 (lower is better)
Translates to: FLRRNCYKHLHLSRSGKSQSPPR*VAAAWG
Trigger: ACCCCATGCAGCCGCCACCAATCGCGGAGGAGATTG...GCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTACGCCTTAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp TGCTGTTGCCAACTGTTTATTCAGGGCCCTGAACGGGTGGTGCGTGGACATGCACGGACGGTGCTGGCATaGAGGTTCTGGATCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CCCQLFIQGPERVVRGHARTVLA*RFWILN
Trigger: GTTCAAGATCCAGAACCTCAATGCCAGCACCGTCCG...TGCATGTCCACGCACCACCCGTTCAGGGCCCTGAATAAACAGTTGGCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325285.8
ENST00000487794.5
CDS-3UTR CAA 90 bp GTAACTGCTATAAGCATCTCCACCTCTCCCGCTCGGGAAAAAGCCACAGAGCCTAGCGAGTCGTCCTTGTaGAACTGGGAGAACTGGGTG +
Preference number: 5 (lower is better)
Translates to: VTAISISTSPAREKATEPSESSL*NWENWV
Trigger: CACCCAGTTCTCCCAGTTCAACAAGGACGACTCGCT...AGGCTCTGTGGCTTTTTCCCGAGCGGGAGAGGTGGAGATGCTTATAGCAGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325285.8
CDS GCA 72 bp GGCTGCGCCCGCCCCTCCAGCACGCGGTCCAGAAAGTaGCGCAAGCCCTCCTTGGCGTGGGCGGGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GCARPSSTRSRK*RKPSLAWAGAG
Trigger: CCCGGCCCCCGCCCACGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGTGCTGGAGGGGCGGGCGCAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS TCA 72 bp TGTCGGGGAGCAGGGGCGTGCCGCCCTCGTCCATCGTaGCATTCTGCCCAGGCGGCCCACGGCCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: CRGAGACRPRPS*HSAQAAHGRLR
Trigger: GCGGAGGCGGCCGTGGGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCGGCACGCCCCTGCTCCCCGACA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000459905.5
ENST00000483559.5
ENST00000491246.4
CDS CAA 90 bp CCCTCCTTGGCGTGGGCGGGGGCCGGGCCAGCCACCACCTCCTCGTaGTCGCTGCCCAGGTCAAAGATGCGGCAGGGGGACGTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: PSLAWAGAGPATTSS*SLPRSKMRQGDVAG
Trigger: CCCGGCCACGTCCCCCTGCCGCATCTTTGACCTGGGCAGCGACAACGAGGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGCCAAGGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 90 bp GCCCGCCCCTCCAGCACGCGGTCCAGAAAGTGCCGCAAGCCCTCCTaGGCGTGGGCGGGGGCCGGGCCAGCCACCACCTCCTCGTTGTCG +
Preference number: 6 (lower is better)
Translates to: ARPSSTRSRKCRKPS*AWAGAGPATTSSLS
Trigger: CGACAACGAGGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGTGCTGGAGGGGCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS GCA 72 bp CGGGGGCCGGGCCAGCCACCACCTCCTCGTTGTCGCTaGCCAGGTCAAAGATGCGGCAGGGGGACGTGGCCG +
Preference number: 6 (lower is better)
Translates to: RGPGQPPPPRCR*PGQRCGRGTWP
Trigger: CGGCCACGTCCCCCTGCCGCATCTTTGACCTGGGCAGCGACAACGAGGAGGTGGTGGCTGGCCCGGCCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS GCA 72 bp AACCGTCCCGCCGGGAGTTCCACGGGGCTGCGTGTCTaGAGGGGACGCCCGGGTACCGCCGCCCAACCAAGG +
Preference number: 6 (lower is better)
Translates to: NRPAGSSTGLRV*RGRPGTAAQPR
Trigger: CCTTGGTTGGGCGGCGGTACCCGGGCGTCCCCTGCAGACACGCAGCCCCGTGGAACTCCCGGCGGGACGGTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443788.1
CDS CCA 72 bp CCAGCACGCGGTCCAGAAAGTGCCGCAAGCCCTCCTTaGCGTGGGCGGGGGCCGGGCCAGCCACCACCTCCT +
Preference number: 6 (lower is better)
Translates to: PARGPESAASPP*RGRGPGQPPPP
Trigger: AGGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGTGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 72 bp GCGTGGGCGGGGGCCGGGCCAGCCACCACCTCCTCGTaGTCGCTGCCCAGGTCAAAGATGCGGCAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: AWAGAGPATTSS*SLPRSKMRQGD
Trigger: GTCCCCCTGCCGCATCTTTGACCTGGGCAGCGACAACGAGGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 72 bp TCCAGCACGCGGTCCAGAAAGTGCCGCAAGCCCTCCTaGGCGTGGGCGGGGGCCGGGCCAGCCACCACCTCC +
Preference number: 6 (lower is better)
Translates to: SSTRSRKCRKPS*AWAGAGPATTS
Trigger: GGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGTGCTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 90 bp GAACTGCTCCCTCCACAGGAACTCGTCCCGCGACACGGCCTGCCATaGGCGGCACACCAGCCCGGCGGCCAGCACGTCGGCCGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: ELLPPQELVPRHGLP*AAHQPGGQHVGRAQ
Trigger: CTGGGCCCGGCCGACGTGCTGGCCGCCGGGCTGGTGTGCCGCCAATGGCAGGCCGTGTCGCGGGACGAGTTCCTGTGGAGGGAGCAGTTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS CCA 72 bp ACGCGGTCCAGAAAGTGCCGCAAGCCCTCCTTGGCGTaGGCGGGGGCCGGGCCAGCCACCACCTCCTCGTTG +
Preference number: 6 (lower is better)
Translates to: TRSRKCRKPSLA*AGAGPATTSSL
Trigger: CAACGAGGAGGTGGTGGCTGGCCCGGCCCCCGCCCACGCCAAGGAGGGCTTGCGGCACTTTCTGGACCGCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS GCA 72 bp CCTGGGCCAGCAGCTCGGCCACCTTGGTCTCTAGCATaGGCTCCGACAGCTGTGGCTGCGCCCGCCCCTCCA +
Preference number: 6 (lower is better)
Translates to: PGPAARPPWSLA*APTAVAAPAPP
Trigger: TGGAGGGGCGGGCGCAGCCACAGCTGTCGGAGCGCATGCTAGAGACCAAGGTGGCCGAGCTGCTGGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS GCA 72 bp CGGCGTGGGGCGGGGGCAGGGTCAACCCGCCGCCCGTaGTCACCTAGGCTGATGACAGCAATCTCGCCGGAT +
Preference number: 6 (lower is better)
Translates to: RRGAGAGSTRRP*SPRLMTAISPD
Trigger: ATCCGGCGAGATTGCTGTCATCAGCCTAGGTGAGCACGGGCGGCGGGTTGACCCTGCCCCCGCCCCACGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459905.5
ENST00000480818.3
CDS TCA 72 bp GCCCTCGTCCATCGTGACATTCTGCCCAGGCGGCCCTaGAACCCACCAACGGCTGCCCTCAGCCCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: ALVHRDILPRRP*NPPTAALSPGP
Trigger: CGGGCCTGGGCTGAGGGCAGCCGTTGGTGGGTTTCAGGGCCGCCTGGGCAGAATGTCACGATGGACGAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443788.1
ENST00000480818.3
CDS GCA 72 bp CGGCTTCCAGCAGCAGGTCAGGGCTGTCGAAGCGGCTaGAGTCGGCCACCATCACCGTGCGGACGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: RLPAAGQGCRSG*SRPPSPCGRCW
Trigger: CCAGCACCGTCCGCACGGTGATGGTGGCCGACTGCAGCCGCTTCGACAGCCCTGACCTGCTGCTGGAAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS GCA 72 bp AGCAGGGGCGTGCCGCCCTCGTCCATCGTGACATTCTaGCCAGGCGGCCCTGAAACCCACCAACGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: SRGVPPSSIVTF*PGGPETHQRLP
Trigger: GGGCAGCCGTTGGTGGGTTTCAGGGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCGGCACGCCCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443788.1
ENST00000480818.3
CDS CCA 72 bp TGTCGCTGCCCAGGTCAAAGATGCGGCAGGGGGACGTaGCCGGGTCACCGGCTTCCAGCAGCAGGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: CRCPGQRCGRGT*PGHRLPAAGQG
Trigger: GCCCTGACCTGCTGCTGGAAGCCGGTGACCCGGCCACGTCCCCCTGCCGCATCTTTGACCTGGGCAGCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CCA 72 bp TTGGCGCCTGTGGCACTGCGCTCGGGTGGCTTGGTGTaGCCCTGGGCCAGCAGCTCGGCCACCTTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LAPVALRSGGLV*PWASSSATLVS
Trigger: AGAGACCAAGGTGGCCGAGCTGCTGGCCCAGGGCCACACCAAGCCACCCGAGCGCAGTGCCACAGGCGCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS TCA 72 bp TGTCGGGGAGCAGGGGCGTGCCGCCCTCGTCCATCGTaGCATTCTGCCCAGGCGGCCCTGAAACCCACCAAC +
Preference number: 6 (lower is better)
Translates to: CRGAGACRPRPS*HSAQAALKPTN
Trigger: GTTGGTGGGTTTCAGGGCCGCCTGGGCAGAATGTCACGATGGACGAGGGCGGCACGCCCCTGCTCCCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443788.1
ENST00000480818.3
CDS GCA 72 bp AGGTGCAGGACCTGGTCTGTGTGTTCCCGCAGCGTCTaGACCTCCACGCAGGGCACCGTGTCATACAGCCGC +
Preference number: 6 (lower is better)
Translates to: RCRTWSVCSRSV*TSTQGTVSYSR
Trigger: GCGGCTGTATGACACGGTGCCCTGCGTGGAGGTGCAGACGCTGCGGGAACACACAGACCAGGTCCTGCACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS CCA 72 bp CGGCCCTCACCCAGCACGGGCCCTGCCGTGGTCATCTaGTGTGGCAGGATCTGCTTGATGCCGATCTGGTGT +
Preference number: 6 (lower is better)
Translates to: RPSPSTGPAVVI*CGRICLMPIWC
Trigger: ACACCAGATCGGCATCAAGCAGATCCTGCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAGGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325285.8
ENST00000480818.3
ENST00000483559.5
CDS CAA 72 bp CCCGCCCCTAGCCCCGCACGCACCTGGAAGGCATTGTaGAGCCACAGCACCGAGCAGGAGGTGATATCTCCG +
Preference number: 6 (lower is better)
Translates to: PAPSPARTWKAL*SHSTEQEVISP
Trigger: CGGAGATATCACCTCCTGCTCGGTGCTGTGGCTCAACAATGCCTTCCAGGTGCGTGCGGGGCTAGGGGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483559.5
CDS CAA 90 bp CCGTGCTCACCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTaGTGCGGCCCCAGGAACACCCCCGAGGCCAGCAGTAGCGAGTCG +
Preference number: 6 (lower is better)
Translates to: PCSPRLMTAISPDEE*CGPRNTPEASSSES
Trigger: CGACTCGCTACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGGTGAGCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459905.5
ENST00000480818.3
CDS CCA 72 bp TGCACCTCCACGCAGGGCACCGTGTCATACAGCCGCTaGAACTCCTCGTACCAGGACATGGCCGCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: CTSTQGTVSYSR*NSSYQDMAAGC
Trigger: ACACCCAGCGGCCATGTCCTGGTACGAGGAGTTCCAGCGGCTGTATGACACGGTGCCCTGCGTGGAGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS CCA 72 bp CTCACCCAGCACGGGCCCTGCCGTGGTCATCTGGTGTaGCAGGATCTGCTTGATGCCGATCTGGTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: LTQHGPCRGHLV*QDLLDADLVWG
Trigger: TCCCCACACCAGATCGGCATCAAGCAGATCCTGCCACACCAGATGACCACGGCAGGGCCCGTGCTGGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325285.8
ENST00000480818.3
ENST00000483559.5
CDS CCA 72 bp CGGGCAGCATGGCGGCAGGGGTGTACCGATCTGGTGTaGGGAGTAGGTGAGGCAGCCAGTGGTGAAGATGAG +
Preference number: 6 (lower is better)
Translates to: RAAWRQGCTDLV*GVGEAASGEDE
Trigger: CTCATCTTCACCACTGGCTGCCTCACCTACTCCCCACACCAGATCGGTACACCCCTGCCGCCATGCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487794.5
CDS CAA 72 bp CCTAGGCTGATGACAGCAATCTCGCCGGATGAGGAGTaGTGCGGCCCCAGGAACACCCCCGAGGCCAGCAGT +
Preference number: 6 (lower is better)
Translates to: PRLMTAISPDEE*CGPRNTPEASS
Trigger: ACTGCTGGCCTCGGGGGTGTTCCTGGGGCCGCACAACTCCTCATCCGGCGAGATTGCTGTCATCAGCCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459905.5
ENST00000480818.3
CDS TCA 72 bp GATCTTGAACAGCCGCTTCACCACGTTGACGTTCTCTaGCTCCACATCCTGGGGGCGGGGGCACGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: DLEQPLHHVDVL*LHILGAGARAR
Trigger: CCTGGCACGTGCCCCCGCCCCCAGGATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483559.5
CDS CCA 72 bp TGGTACCCGGAATGGGAGAAGCTGAGGTGCAGGACCTaGTCTGTGTGTTCCCGCAGCGTCTGCACCTCCACG +
Preference number: 6 (lower is better)
Translates to: WYPEWEKLRCRT*SVCSRSVCTST
Trigger: CGTGGAGGTGCAGACGCTGCGGGAACACACAGACCAGGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS CAA 72 bp GTGAGGCAGCCAGTGGTGAAGATGAGGTACTTGCTCTaGGCGCCTGTGGCACTGCGCTCGGGTGGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: VRQPVVKMRYLL*APVALRSGGLV
Trigger: CACCAAGCCACCCGAGCGCAGTGCCACAGGCGCCAAGAGCAAGTACCTCATCTTCACCACTGGCTGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325285.8
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 72 bp GGGGCGGCTGTAGTGATCGCCTTCACAGTGCAGTCCTaGGAGCAGGACGCGAACTGGTACCCGGAATGGGAG +
Preference number: 6 (lower is better)
Translates to: GAAVVIAFTVQS*EQDANWYPEWE
Trigger: CTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAAGGCGATCACTACAGCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428398.5
CDS CCA 72 bp GCCTTCACAGTGCAGTCCTTGGAGCAGGACGCGAACTaGTACCCGGAATGGGAGAAGCTGAGGTGCAGGACC +
Preference number: 6 (lower is better)
Translates to: AFTVQSLEQDAN*YPEWEKLRCRT
Trigger: GGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428398.5
CDS CAA 72 bp CAGTCGGCCACCATCACCGTGCGGACGGTGCTGGCATaGAGGTTCTGGATCTTGAACAGCCGCTTCACCACG +
Preference number: 6 (lower is better)
Translates to: QSATITVRTVLA*RFWILNSRFTT
Trigger: CGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAGCACCGTCCGCACGGTGATGGTGGCCGACTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 90 bp AAGCGGCTGCAGTCGGCCACCATCACCGTGCGGACGGTGCTGGCATaGAGGTTCTGGATCTTGAACAGCCGCTTCACCACGTTGACGTTC +
Preference number: 6 (lower is better)
Translates to: KRLQSATITVRTVLA*RFWILNSRFTTLTF
Trigger: GAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAGCACCGTCCGCACGGTGATGGTGGCCGACTGCAGCCGCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 90 bp GTGCTGGCATTGAGGTTCTGGATCTTGAACAGCCGCTTCACCACGTaGACGTTCTCTGACTCCACATCCTGGGGGCGGGGGCACGTGCCA +
Preference number: 6 (lower is better)
Translates to: VLALRFWILNSRFTT*TFSDSTSWGRGHVP
Trigger: TGGCACGTGCCCCCGCCCCCAGGATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483559.5
CDS CCA 72 bp CAGTCCTTGGAGCAGGACGCGAACTGGTACCCGGAATaGGAGAAGCTGAGGTGCAGGACCTGGTCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: QSLEQDANWYPE*EKLRCRTWSVC
Trigger: ACACACAGACCAGGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325285.8
ENST00000428398.5
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000491246.4
CDS CAA 90 bp GCCACCATCACCGTGCGGACGGTGCTGGCATTGAGGTTCTGGATCTaGAACAGCCGCTTCACCACGTTGACGTTCTCTGACTCCACATCC +
Preference number: 6 (lower is better)
Translates to: ATITVRTVLALRFWI*NSRFTTLTFSDSTS
Trigger: GGATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAGCACCGTCCGCACGGTGATGGTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CCA 72 bp ATCTTCACAGTGCAGTCCTTGGAGCAGGACGCGAACTaGTACCCGGAATGGGAGAAGCTGAGGTGCAGGACC +
Preference number: 6 (lower is better)
Translates to: IFTVQSLEQDAN*YPEWEKLRCRT
Trigger: GGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000443788.1
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
CDS CCA 72 bp TACTTCACAGTGCAGTCCTTGGAGCAGGACGCGAACTaGTACCCGGAATGGGAGAAGCTGAGGTGCAGGACC +
Preference number: 6 (lower is better)
Translates to: YFTVQSLEQDAN*YPEWEKLRCRT
Trigger: GGTCCTGCACCTCAGCTTCTCCCATTCCGGGTACCAGTTCGCGTCCTGCTCCAAGGACTGCACTGTGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491246.4
CDS CAA 72 bp TTGAGGTTCTGGATCTTGAACAGCCGCTTCACCACGTaGACGTTCTCTGACTCCACATCCTGGGGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: LRFWILNSRFTT*TFSDSTSWGRG
Trigger: CCCCCGCCCCCAGGATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483559.5
CDS CCA 72 bp ACCATCACCGTGCGGACGGTGCTGGCATTGAGGTTCTaGATCTTGAACAGCCGCTTCACCACGTTGACGTTC +
Preference number: 6 (lower is better)
Translates to: TITVRTVLALRF*ILNSRFTTLTF
Trigger: GAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAGCACCGTCCGCACGGTGATGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 72 bp ACCGTGCGGACGGTGCTGGCATTGAGGTTCTGGATCTaGAACAGCCGCTTCACCACGTTGACGTTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: TVRTVLALRFWI*NSRFTTLTFSD
Trigger: GTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAGCACCGTCCGCACGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000483559.5
ENST00000487794.5
CDS CAA 90 bp GTGCTGGCATTGAGGTTCTGGATCTTGAACAGCCGCTTCACCACGTaGACGTTCTCTGACTCCACATCCTGGAAGGCATTGTTGAGCCAC +
Preference number: 6 (lower is better)
Translates to: VLALRFWILNSRFTT*TFSDSTSWKALLSH
Trigger: GTGGCTCAACAATGCCTTCCAGGATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAATGCCAGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000487794.5
CDS CAA 72 bp TTGAGGTTCTGGATCTTGAACAGCCGCTTCACCACGTaGACGTTCTCTGACTCCACATCCTGGAAGGCATTG +
Preference number: 6 (lower is better)
Translates to: LRFWILNSRFTT*TFSDSTSWKAL
Trigger: CAATGCCTTCCAGGATGTGGAGTCAGAGAACGTCAACGTGGTGAAGCGGCTGTTCAAGATCCAGAACCTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325285.8
ENST00000459905.5
ENST00000480818.3
ENST00000487794.5