Pregenerated sensors for FBXW4 (Homo sapiens)
Ensembl gene IDs: ENSG00000107829Ensembl transcript IDs: ENST00000331272.9, ENST00000457105.2, ENST00000470093.5, ENST00000482428.1, ENST00000489578.2, ENST00000664783.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGGCAGGATGTCGGCCCAAGCCTaGCCCCCTCGTCCCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PSRQEKSLSSWFPWPRGRMSAQA*PPRPCA Trigger: AGCACAGGGACGAGGGGGTCAGGCTTGGGCCGACAT...CCTGCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR TCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGCAGATCGCAGCTGGTaGAGCGCCGCAGCCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRADRSW*SAAASG Trigger: GCCGCTGGCTGCGGCGCTTCACCAGCTGCGATCTGC...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR TCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAATGTCGGCCCAAGCCTaGCCCCCTCGTCCCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRMSAQA*PPRPCA Trigger: AGCACAGGGACGAGGGGGTCAGGCTTGGGCCGACAT...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR TCA 90 bp | CCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGGCAGGGGCAAGAGAAGTCCCTaGGTAGCTGGTTTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSRQEKSLSSWFPWPRGRGKRSP*VAGFPG Trigger: GCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCC...CCTGCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR CCA 90 bp | CCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGGCAGGAAGTCCCTGAGTAGCTaGTTTCCCTGGCCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PSRQEKSLSSWFPWPRGRKSLSS*FPWPRG Trigger: GCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTT...CCTGCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR TCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGACCAGATTCTCAGGGGTaGGAAGTGCCCGCAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRPDSQG*EVPATS Trigger: GCTTGTTGCGGGCACTTCTCACCCCTGAGAATCTGG...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR GCA 90 bp | CCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGGCAGGAAGTGTGTCATCAGCTaGCCACTGTTGAGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSRQEKSLSSWFPWPRGRKCVIS*PLLRSQ Trigger: CTGGGACCTCAACAGTGGGCAGCTGATGACACACTT...CCTGCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR GCA 90 bp | CCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGGCAGGAGGAGGAGCTATCACTaGACCCTCCAGGCAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: PSRQEKSLSSWFPWPRGRRRSYH*TLQARE Trigger: TTCTCTTGCCTGGAGGGTGCAGTGATAGCTCCTCCT...CCTGCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR CCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGACCTTCACTGGGACACTaGTCATCAGGTCGGTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRPSLGH*SSGRCR Trigger: TCGGCACCGACCTGATGACCAGTGTCCCAGTGAAGG...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR CCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAAAGTCCCTGAGTAGCTaGTTTCCCTGGCCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRKSLSS*FPWPRG Trigger: GCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTT...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR CCA 90 bp | CCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGGCAGGCAGAAAGGAACCATCTaGGAAGGTGGGAGCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: PSRQEKSLSSWFPWPRGRQKGTI*EGGSTS Trigger: TGAGGTGCTCCCACCTTCCCAGATGGTTCCTTTCTG...CCTGCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR CCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGTCAAGGGTGAGGTCTaGCTGGTGCCAGGAGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRVKGEV*LVPGGY Trigger: ATAGCCTCCTGGCACCAGCCAGACCTCACCCTTGAC...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR TCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGATGCATCCAGGGCATCTaGCTGCATCTCCACTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRCIQGI*LHLHFS Trigger: GCTGAAGTGGAGATGCAGTCAGATGCCCTGGATGCA...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR GCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAAAGTGTGTCATCAGCTaGCCACTGTTGAGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRKCVIS*PLLRSQ Trigger: CTGGGACCTCAACAGTGGGCAGCTGATGACACACTT...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR GCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAAGGAGGAGCTATCACTaGACCCTCCAGGCAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRRRSYH*TLQARE Trigger: TTCTCTTGCCTGGAGGGTGCAGTGATAGCTCCTCCT...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR CCA 90 bp | CCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGGCAGGCCCTTTGCTCTTTCTTaGTTTCAAAGCAAAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PSRQEKSLSSWFPWPRGRPFALS*FQSKTR Trigger: CCTGGTTTTGCTTTGAAACCAAGAAAGAGCAAAGGG...CCTGCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS-3UTR CCA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGACCCTTTGCTCTTTCTTaGTTTCAAAGCAAAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRPFALS*FQSKTR Trigger: CCTGGTTTTGCTTTGAAACCAAGAAAGAGCAAAGGG...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS GCA 90 bp | TGGGAAGACATCTTGGAGCACTGTGAGGGGTGTAGCCCCCAGTGGTaGCTGGCCAGAAGACCCACGAGCTCAGCCACAGCTGGGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: WEDILEHCEGCSPQW*LARRPTSSATAGPA Trigger: AGCAGGCCCAGCTGTGGCTGAGCTCGTGGGTCTTCTGGCCAGGCACCACTGGGGGCTACACCCCTCACAGTGCTCCAAGATGTCTTCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 90 bp | TGGGGCGGAGTCCCCAGAAGCCAGGCAGCCAGGGCTTCTGGAGAGTaGGATGGGAGTCCGCCAGAGTCCTCTGAGGCCAATAACAAACAA | + |
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Preference number: 5 (lower is better) Translates to: WGGVPRSQAARASGE*DGSPPESSEANNKQ Trigger: TTGTTTGTTATTGGCCTCAGAGGACTCTGGCGGACTCCCATCCCACTCTCCAGAAGCCCTGGCTGCCTGGCTTCTGGGGACTCCGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS GCA 90 bp | AAGAGCACAATGGCAGGGCACAGAAAAGGGCTCCAGGGAACAGGTTaGTGGGGCTGGAAGGTGCTGCCCGTGGTCAGAAGTAGGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: KSTMAGHRKGLQGTG*WGWKVLPVVRSRSS Trigger: GCTGCTCCTACTTCTGACCACGGGCAGCACCTTCCAGCCCCAGCAACCTGTTCCCTGGAGCCCTTTTCTGTGCCCTGCCATTGTGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 90 bp | AGAAGTGGCCAAGGGAGCCATCAGAGGAGCTGTGGGAAGACATCTTaGAGCACTGTGAGGGGTGTAGCCCCCAGTGGTGCCTGGCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RSGQGSHQRSCGKTS*STVRGVAPSGAWPE Trigger: TTCTGGCCAGGCACCACTGGGGGCTACACCCCTCACAGTGCTCCAAGATGTCTTCCCACAGCTCCTCTGATGGCTCCCTTGGCCACTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS-3UTR CAA 90 bp | CCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAGGCAGGATCAGCTGCCCACTGTaGAGGTCCCAGATTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSRQEKSLSSWFPWPRGRISCPL*RSQILR Trigger: CCTGAGAATCTGGGACCTCAACAGTGGGCAGCTGAT...CCTGCCTCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS CCA 90 bp | AGAGCGAGCCTGTCGGGCTCCTGTTTAGGAATCCCAAGAGCACAATaGCAGGGCACAGAAAAGGGCTCCAGGGAACAGGTTGCTGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RASLSGSCLGIPRAQ*QGTEKGSREQVAGA Trigger: AGCCCCAGCAACCTGTTCCCTGGAGCCCTTTTCTGTGCCCTGCCATTGTGCTCTTGGGATTCCTAAACAGGAGCCCGACAGGCTCGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS-3UTR CAA 90 bp | ACTGCACCCTCCAGGCAAGAGAAGTCCCTGAGTAGCTGGTTTCCCTGGCCCAGAATCAGCTGCCCACTGTaGAGGTCCCAGATTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TAPSRQEKSLSSWFPWPRISCPL*RSQILR Trigger: CCTGAGAATCTGGGACCTCAACAGTGGGCAGCTGAT...TCTGGGCCAGGGAAACCAGCTACTCAGGGACTTCTCTTGCCTGGAGGGTGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331272.9 ENST00000664783.1 |
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| CDS GCA 90 bp | CAGCAGCCACTAAACTATAGAGTGGGAGTGCCAAAACAGTCACTGTaGCATGCCCCAAGTGACTGCCAGCCTGGGAAGCAGCCAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: QQPLNYRVGVPKQSL*HAPSDCQPGKQPVD Trigger: ATCCACTGGCTGCTTCCCAGGCTGGCAGTCACTTGGGGCATGGCACAGTGACTGTTTTGGCACTCCCACTCTATAGTTTAGTGGCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 90 bp | CACTGTGCCATGCCCCAAGTGACTGCCAGCCTGGGAAGCAGCCAGTaGATACTGAAGAACCAAACTACAAAGTCAGGAGGTGTTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: HCAMPQVTASLGSSQ*ILKNQTTKSGGVAL Trigger: GAGGGCAACACCTCCTGACTTTGTAGTTTGGTTCTTCAGTATCCACTGGCTGCTTCCCAGGCTGGCAGTCACTTGGGGCATGGCACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS TCA 90 bp | GAAATGCCGTGCTCATTCCCTAGGGGATTGTGGGTTAAGCCAGAATaGGAGAAGTGGCCAAGGGAGCCATCAGAGGAGCTGTGGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: EMPCSFPRGLWVKPE*EKWPREPSEELWED Trigger: GTCTTCCCACAGCTCCTCTGATGGCTCCCTTGGCCACTTCTCTCATTCTGGCTTAACCCACAATCCCCTAGGGAATGAGCACGGCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 90 bp | TGGAAATCATTCGAGCAGGCAATTGGACTCTCCAGATTTGAGGAGTaGGGGCCAGGTGAAGGGCGCCAGCACAGACACAGGCATCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: WKSFEQAIGLSRFEE*GPGEGRQHRHRHLF Trigger: AAAGAGATGCCTGTGTCTGTGCTGGCGCCCTTCACCTGGCCCCCACTCCTCAAATCTGGAGAGTCCAATTGCCTGCTCGAATGATTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS TCA 90 bp | AGTGTGTCATCAGCTGCCCACTTTGTGTCTGGGGAGAAAAATCGCTaGGAAAGCAGCTTAGCGAGCTGTCCCTGGTGTTCCTGGTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: SVSSAAHFVSGEKNR*ESSLASCPWCSWSS Trigger: GCTAGACCAGGAACACCAGGGACAGCTCGCTAAGCTGCTTTCTCAGCGATTTTTCTCCCCAGACACAAAGTGGGCAGCTGATGACACACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482428.1 |
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| CDS GCA 90 bp | TCTGGCTTGTCAGAACCTGTGGTGGAAATGGCTAACAATGGGAAATaGCGTGCTCATTCCCTAGGGGATTGTGGGTTAAGCCAGAATGAG | + |
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Preference number: 5 (lower is better) Translates to: SGLSEPVVEMANNGK*RAHSLGDCGLSQNE Trigger: CTCATTCTGGCTTAACCCACAATCCCCTAGGGAATGAGCACGGCATTTCCCATTGTTAGCCATTTCCACCACAGGTTCTGACAAGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 90 bp | GTCTCCAGTTCTGAGACACCTTCACTCGTTCCTTCACTGGGACACTaGTCATCCTATGTCCAGACAGAACAGATAATCCAATCACTACAA | + |
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Preference number: 5 (lower is better) Translates to: VSSSETPSLVPSLGH*SSYVQTEQIIQSLQ Trigger: TTGTAGTGATTGGATTATCTGTTCTGTCTGGACATAGGATGACCAGTGTCCCAGTGAAGGAACGAGTGAAGGTGTCTCAGAACTGGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489578.2 |
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| CDS CCA 72 bp | TGGAGCACTGTGAGGGGTGTAGCCCCCAGTGGTGCCTaGCCAGAAGACCCACGAGCTCAGCCACAGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: WSTVRGVAPSGA*PEDPRAQPQLG Trigger: GCCCAGCTGTGGCTGAGCTCGTGGGTCTTCTGGCCAGGCACCACTGGGGGCTACACCCCTCACAGTGCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS GCA 72 bp | ATCTTGGAGCACTGTGAGGGGTGTAGCCCCCAGTGGTaGCTGGCCAGAAGACCCACGAGCTCAGCCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: ILEHCEGCSPQW*LARRPTSSATA Trigger: AGCTGTGGCTGAGCTCGTGGGTCTTCTGGCCAGGCACCACTGGGGGCTACACCCCTCACAGTGCTCCAAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 72 bp | GACATCTTGGAGCACTGTGAGGGGTGTAGCCCCCAGTaGTGCCTGGCCAGAAGACCCACGAGCTCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: DILEHCEGCSPQ*CLARRPTSSAT Trigger: TGTGGCTGAGCTCGTGGGTCTTCTGGCCAGGCACCACTGGGGGCTACACCCCTCACAGTGCTCCAAGATGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CAA 90 bp | GAGAAGTGGCCAAGGGAGCCATCAGAGGAGCTGTGGGAAGACATCTaGGAGCACTGTGAGGGGTGTAGCCCCCAGTGGTGCCTGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: EKWPREPSEELWEDI*EHCEGCSPQWCLAR Trigger: TCTGGCCAGGCACCACTGGGGGCTACACCCCTCACAGTGCTCCAAGATGTCTTCCCACAGCTCCTCTGATGGCTCCCTTGGCCACTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CAA 72 bp | CCAAGGGAGCCATCAGAGGAGCTGTGGGAAGACATCTaGGAGCACTGTGAGGGGTGTAGCCCCCAGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PREPSEELWEDI*EHCEGCSPQWC Trigger: GCACCACTGGGGGCTACACCCCTCACAGTGCTCCAAGATGTCTTCCCACAGCTCCTCTGATGGCTCCCTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS TCA 72 bp | CAAACAACGCCGAGAGGCACACGAGAAGGAGCAGGCTaGCCCTGTTGCCCAGAGTGTCCCTTTAGAGCCCTA | + |
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Preference number: 6 (lower is better) Translates to: QTTPRGTREGAG*PCCPECPFRAL Trigger: TAGGGCTCTAAAGGGACACTCTGGGCAACAGGGTCAGCCTGCTCCTTCTCGTGTGCCTCTCGGCGTTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 72 bp | GTGAATCCCTTGGATGGGTATATGCTACTACATAGGTaGGGCGGAGTCCCCAGAAGCCAGGCAGCCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VNPLDGYMLLHR*GGVPRSQAARA Trigger: AGCCCTGGCTGCCTGGCTTCTGGGGACTCCGCCCCACCTATGTAGTAGCATATACCCATCCAAGGGATTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS TCA 72 bp | TGCTCATTCCCTAGGGGATTGTGGGTTAAGCCAGAATaGGAGAAGTGGCCAAGGGAGCCATCAGAGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: CSFPRGLWVKPE*EKWPREPSEEL Trigger: CAGCTCCTCTGATGGCTCCCTTGGCCACTTCTCTCATTCTGGCTTAACCCACAATCCCCTAGGGAATGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS GCA 72 bp | CTAAACTATAGAGTGGGAGTGCCAAAACAGTCACTGTaGCATGCCCCAAGTGACTGCCAGCCTGGGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LNYRVGVPKQSL*HAPSDCQPGKQ Trigger: CTGCTTCCCAGGCTGGCAGTCACTTGGGGCATGGCACAGTGACTGTTTTGGCACTCCCACTCTATAGTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 72 bp | TCTCCAGTTCTGAGACACCTTCACTCGTTCCTTCACTaGGACACTGGTCATCCTGCAGCCTTGGAGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: SPVLRHLHSFLH*DTGHPAALEPL Trigger: AAGTGGCTCCAAGGCTGCAGGATGACCAGTGTCCCAGTGAAGGAACGAGTGAAGGTGTCTCAGAACTGGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457105.2 |
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| CDS CAA 72 bp | GCACACCATAAAAACAGATCTCTAGACGTGACAAGTTaGAGCCCAGGAGAGAGCGAGCCTGTCGGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: AHHKNRSLDVTS*SPGESEPVGLL Trigger: CAGGAGCCCGACAGGCTCGCTCTCTCCTGGGCTCAAACTTGTCACGTCTAGAGATCTGTTTTTATGGTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CAA 90 bp | GTGGTCTCTGCACACCATAAAAACAGATCTCTAGACGTGACAAGTTaGAGCCCAGGAGAGAGCGAGCCTGTCGGGCTCCTGTTTAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: VVSAHHKNRSLDVTS*SPGESEPVGLLFRN Trigger: ATTCCTAAACAGGAGCCCGACAGGCTCGCTCTCTCCTGGGCTCAAACTTGTCACGTCTAGAGATCTGTTTTTATGGTGTGCAGAGACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 72 bp | AGCCCTAGGCTGATAAAAAGGCCATACGAGCTATCCTaGGGCTTTCATGACTCAAGCCAAGACTTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SPRLIKRPYELS*GFHDSSQDFLQ Trigger: CTGGAGGAAGTCTTGGCTTGAGTCATGAAAGCCCCAGGATAGCTCGTATGGCCTTTTTATCAGCCTAGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS GCA 72 bp | TCAGAACCTGTGGTGGAAATGGCTAACAATGGGAAATaGCGTGCTCATTCCCTAGGGGATTGTGGGTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: SEPVVEMANNGK*RAHSLGDCGLS Trigger: GCTTAACCCACAATCCCCTAGGGAATGAGCACGGCATTTCCCATTGTTAGCCATTTCCACCACAGGTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 72 bp | TCTCCAGTTCTGAGACACCTTCACTCGTTCCTTCACTaGGACACTGGTCATCCTATGTCCAGACAGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: SPVLRHLHSFLH*DTGHPMSRQNR Trigger: TCTGTTCTGTCTGGACATAGGATGACCAGTGTCCCAGTGAAGGAACGAGTGAAGGTGTCTCAGAACTGGAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489578.2 |
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| CDS CCA 72 bp | AGGAGAACAAAGTCAGATCTGGCTTGTCAGAACCTGTaGTGGAAATGGCTAACAATGGGAAATGCCGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RRTKSDLACQNL*WKWLTMGNAVL Trigger: GAGCACGGCATTTCCCATTGTTAGCCATTTCCACCACAGGTTCTGACAAGCCAGATCTGACTTTGTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CAA 90 bp | CCTTCAGGAAACCTGGGCTTGAAACTTAAACAGCAAGCAAGCAAGTaGAAAGCAGTGGTGTTAGGAATGGGCCATGTCCCTGCATGTCTT | + |
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Preference number: 6 (lower is better) Translates to: PSGNLGLKLKQQASK*KAVVLGMGHVPACL Trigger: AAGACATGCAGGGACATGGCCCATTCCTAACACCACTGCTTTCAACTTGCTTGCTTGCTGTTTAAGTTTCAAGCCCAGGTTTCCTGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 72 bp | TCTGAGACACCTTCACTCGTTCCTTCACTGGGACACTaGTCATCCTATGTCCAGACAGAACAGATAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: SETPSLVPSLGH*SSYVQTEQIIQ Trigger: TTGGATTATCTGTTCTGTCTGGACATAGGATGACCAGTGTCCCAGTGAAGGAACGAGTGAAGGTGTCTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489578.2 |
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| CDS CAA 72 bp | GCTGCCAAACAAAAGGAGAACAAAGTCAGATCTGGCTaGTCAGAACCTGTGGTGGAAATGGCTAACAATGGG | + |
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Preference number: 6 (lower is better) Translates to: AAKQKENKVRSG*SEPVVEMANNG Trigger: CCCATTGTTAGCCATTTCCACCACAGGTTCTGACAAGCCAGATCTGACTTTGTTCTCCTTTTGTTTGGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CAA 90 bp | CACAAAAGAGCTGCCAAACAAAAGGAGAACAAAGTCAGATCTGGCTaGTCAGAACCTGTGGTGGAAATGGCTAACAATGGGAAATGCCGT | + |
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Preference number: 6 (lower is better) Translates to: HKRAAKQKENKVRSG*SEPVVEMANNGKCR Trigger: ACGGCATTTCCCATTGTTAGCCATTTCCACCACAGGTTCTGACAAGCCAGATCTGACTTTGTTCTCCTTTTGTTTGGCAGCTCTTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 72 bp | CCTGAAGGTTTTAAGAGCTGGGGGAATCTGGTAATGTaGTATAAGCACAGGGCAGGTATAAAGGCACCAAAA | + |
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Preference number: 6 (lower is better) Translates to: PEGFKSWGNLVM*YKHRAGIKAPK Trigger: TTTTGGTGCCTTTATACCTGCCCTGTGCTTATACCACATTACCAGATTCCCCCAGCTCTTAAAACCTTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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| CDS CCA 72 bp | AGAACAAAGTCAGATCTGGCTTGTCAGAACCTGTGGTaGAAATGGCTAACAATGGGAAATGCCGTGCTCATT | + |
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Preference number: 6 (lower is better) Translates to: RTKSDLACQNLW*KWLTMGNAVLI Trigger: AATGAGCACGGCATTTCCCATTGTTAGCCATTTCCACCACAGGTTCTGACAAGCCAGATCTGACTTTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470093.5 |
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