Pregenerated sensors for FBXW11 (Homo sapiens)
Ensembl gene IDs: ENSG00000072803Ensembl transcript IDs: ENST00000265094.9, ENST00000296933.10, ENST00000393802.6, ENST00000517395.6, ENST00000518106.1, ENST00000519693.5, ENST00000520376.1, ENST00000522376.1, ENST00000522507.1, ENST00000522891.1, ENST00000523843.5
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCATAACTGAAGTGTTCTGGAGACATCTGACACTGGGCATGCTCTaGAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTGGCGCAG | + |
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Preference number: 1 (lower is better) Translates to: SITEVFWRHLTLGML*RQLSAHMLSTRLAQ Trigger: CTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTCAGATGTCTCCAGAACACTTCAGTTATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| 3UTR CAA 90 bp | GGCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTaGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAACACTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GMLCRQLSAHMLSTR*AQPSHKDLGTEHWK Trigger: TTTCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| 3UTR-3UTR TCA 90 bp | TCTCTACCAGGTTGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAACACTGGATCCACCAATCCAGAATaGATGGGGGTTTTCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SLPGWRSLATKTLAQNTGSTNPE*MGVFPF Trigger: GAAAGGGAAAACCCCCATTCATTCTGGATTGGTGGA...TCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGGTAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTGGCGCAGCCTACTTGGCACAGAACACTaGAAAATATTTTGTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: CSAGNSVRTCSLPGWRSLLGTEH*KIFCTS Trigger: TGAAGTACAAAATATTTTCCAGTGTTCTGTGCCAAG...TAGGCTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| 3UTR GCA 72 bp | GAAGTGTTCTGGAGACATCTGACACTGGGCATGCTCTaGAGGCAACTCAGTGCGCACATGCTCTCTACCAGG | + |
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Preference number: 3 (lower is better) Translates to: EVFWRHLTLGML*RQLSAHMLSTR Trigger: CCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTCAGATGTCTCCAGAACACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| 3UTR-3UTR CAA 90 bp | ACATCTGACACTGGGCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCTAGCCACAAAGACCTaGGCACAGAACACTGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: TSDTGHALQATQCAHALYLATKT*AQNTGK Trigger: TTTTCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAG...GTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTCAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR GCA 90 bp | GCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTGGCGCAGCACACTGGGCATGCTCTaGAGGCAACTCAGTGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: ACSAGNSVRTCSLPGWRSTLGML*RQLSAH Trigger: GTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGT...GCTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR GCA 90 bp | GCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTGGCGCAGCAACTCAGTGCGCACATaGTCTCTACCAGGTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: ACSAGNSVRTCSLPGWRSNSVRT*SLPGWR Trigger: GCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTT...GCTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR GCA 90 bp | GACACTGGGCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTCTGCAGGCAACTCAGTaGGCACATGCTCTCTACCAG | + |
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Preference number: 4 (lower is better) Translates to: DTGHALQATQCAHALYQVLQATQ*AHALYQ Trigger: CTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAG...AACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR CCA 90 bp | GACACTGGGCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTTGCTCTCTACCAGGTTaGCGCAGCCTAGCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: DTGHALQATQCAHALYQVCSLPG*RSLATK Trigger: CTTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGCA...AACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| 3UTR CAA 72 bp | TGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTaGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: CRQLSAHMLSTR*AQPSHKDLGTE Trigger: TTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR TCA 90 bp | GCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTGGCGCAGCCCTTTCAGACTAGTCTaGGAAAAGACAGCAGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: ACSAGNSVRTCSLPGWRSPFRLV*EKTAVK Trigger: CTTGACTGCTGTCTTTTCTCAGACTAGTCTGAAAGG...GCTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR TCA 90 bp | CCAGGTTGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAACACTGGAAAATATTGTTCTGGAGACATCTaGCACTGGGCATGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PGWRSLATKTLAQNTGKYCSGDI*HWACSA Trigger: TGCAGAGCATGCCCAGTGTCAGATGTCTCCAGAACA...ATATTTTCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR TCA 90 bp | TCTGACACTGGGCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGTTGATCTTCCATAACTaGAGTGTTCTGGAGACATCT | + |
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Preference number: 4 (lower is better) Translates to: SDTGHALQATQCAHALYQLIFHN*SVLETS Trigger: AGATGTCTCCAGAACACTTCAGTTATGGAAGATCAA...CTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR TCA 90 bp | CCAGGTTGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAACACTGGAAAATATTCCACCAATCCAGAATaGATGGGGGTTTTCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PGWRSLATKTLAQNTGKYSTNPE*MGVFPF Trigger: GAAAGGGAAAACCCCCATTCATTCTGGATTGGTGGA...ATATTTTCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR CCA 90 bp | CCAGGTTGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAACACTGGAAAATATATAACTGAAGTGTTCTaGAGACATCTGACACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PGWRSLATKTLAQNTGKYITEVF*RHLTLG Trigger: GCCCAGTGTCAGATGTCTCCAGAACACTTCAGTTAT...ATATTTTCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR CCA 90 bp | CCAGGTTGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAACACTGGAAAATATCCAATCCAGAATGAATaGGGGTTTTCCCTTTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: PGWRSLATKTLAQNTGKYPIQNE*GFSLSD Trigger: GTCTGAAAGGGAAAACCCCCATTCATTCTGGATTGG...ATATTTTCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR CCA 90 bp | AGTGCGCACATGCTCTCTACCAGGTTGGCGCAGCCTAGCCACAAAGACCTTGGCCTTGGCACAGAACACTaGAAAATATTTTGTACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SAHMLSTRLAQPSHKDLGLGTEH*KIFCTS Trigger: TGAAGTACAAAATATTTTCCAGTGTTCTGTGCCAAG...GCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGCATGTGCGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS GCA 90 bp | CTGAACTCCGAGCTGAGAGTAGCACTGGACGGTGGGCGTAGGACGTaGAGACCTGAAGAGTTAAGAGCTTGCTCATGGCAGGGCCTCGAG | + |
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Preference number: 5 (lower is better) Translates to: LNSELRVALDGGRRT*RPEELRACSWQGLE Trigger: CTCGAGGCCCTGCCATGAGCAAGCTCTTAACTCTTCAGGTCTGCACGTCCTACGCCCACCGTCCAGTGCTACTCTCAGCTCGGAGTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296933.10 |
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| CDS-3UTR CAA 90 bp | AGTGCGCACATGCTCTCTACCAGGTTGGCGCAGCCTAGCCACAAAGACCTTGGCATGCTCTCTACCAGGTaGGCGCAGCCTAGCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: SAHMLSTRLAQPSHKDLGMLSTR*AQPSHK Trigger: TTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGCAT...GCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGCATGTGCGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS-3UTR CAA 90 bp | AGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTGGCGCAGCCTAGCCACAAAATGAGCTCGATGGTCTaGTCCTCAATCACCGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: RQLSAHMLSTRLAQPSHKMSSMV*SSITES Trigger: CGACTCGGTGATTGAGGACAAGACCATCGAGCTCAT...TTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS GCA 90 bp | GATGTTCCATTACTTATCTGGAGACATCTGACACTGGGCATGCTCTaGAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTTGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: DVPLLIWRHLTLGML*RQLSAHMLSTRLAQ Trigger: CTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTCAGATGTCTCCAGATAAGTAATGGAACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265094.9 |
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| CDS-3UTR CAA 90 bp | ACCAGGTTGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAACACTGGAAAATACTAGCCACAAAGACCTaGGCACAGAACACTGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: TRLAQPSHKDLGTEHWKILATKT*AQNTGK Trigger: TTTTCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAG...TATTTTCCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520376.1 |
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| CDS CCA 90 bp | TCTAAGCCTTGCTACGTTTTGGAAGAGAGATTAGAAATCAGAAGCTaGTTTGTCAATTTGCAGCCTCAGGTTTCAGGCCTGAGGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SKPCYVLEERLEIRS*FVNLQPQVSGLRPE Trigger: CTCAGGCCTCAGGCCTGAAACCTGAGGCTGCAAATTGACAAACCAGCTTCTGATTTCTAATCTCTCTTCCAAAACGTAGCAAGGCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522891.1 |
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| CDS TCA 90 bp | TCAGTTCCTAGGACACAGCCAAGTAAGACTTCTCATCTTCCAGACTaGACACGCTTAGTAATAATCAAAACATTCTGTCATCAATGGTTA | + |
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Preference number: 5 (lower is better) Translates to: SVPRTQPSKTSHLPD*TRLVIIKTFCHQWL Trigger: TAACCATTGATGACAGAATGTTTTGATTATTACTAAGCGTGTTCAGTCTGGAAGATGAGAAGTCTTACTTGGCTGTGTCCTAGGAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518106.1 ENST00000522376.1 |
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| CDS CAA 90 bp | GCCGCGGCCCGCAGAGCGTTGTGGGACCGAGCCTCTGACACCAGGTaGCTGGCTCTTGGCAGCCCGAAGCTGAACTCCGAGCTGAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: AAARRALWDRASDTR*LALGSPKLNSELRV Trigger: TACTCTCAGCTCGGAGTTCAGCTTCGGGCTGCCAAGAGCCAGCAACCTGGTGTCAGAGGCTCGGTCCCACAACGCTCTGCGGGCCGCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296933.10 |
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| CDS CAA 90 bp | GGCATGCTCTGCAGGCAACTCAGTGCGCACATGCTCTCTACCAGGTaGGCGCAGCCTAGCCACAAAGACCTTGGCACAGAACACATGAGC | + |
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Preference number: 6 (lower is better) Translates to: GMLCRQLSAHMLSTR*AQPSHKDLGTEHMS Trigger: GCTCATGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265094.9 ENST00000517395.6 |
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| CDS GCA 72 bp | GAGCTGAGAGTAGCACTGGACGGTGGGCGTAGGACGTaGAGACCTGAAGAGTTAAGAGCTTGCTCATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ELRVALDGGRRT*RPEELRACSWQ Trigger: CTGCCATGAGCAAGCTCTTAACTCTTCAGGTCTGCACGTCCTACGCCCACCGTCCAGTGCTACTCTCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296933.10 |
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| CDS CAA 72 bp | AAAGACCTTGGCACAGAACACATGAGCTCGATGGTCTaGTCCTCAATCACCGAGTCGGGCTCCATGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: KDLGTEHMSSMV*SSITESGSMAA Trigger: GGCCGCCATGGAGCCCGACTCGGTGATTGAGGACAAGACCATCGAGCTCATGTGTTCTGTGCCAAGGTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265094.9 ENST00000517395.6 |
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| CDS CAA 72 bp | CCAAACATGCACTTCGGTAACATGAGCTCGATGGTCTaGTCCTCAATCACCGAGTCGGGCTCCATGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PNMHFGNMSSMV*SSITESGSMAA Trigger: GGCCGCCATGGAGCCCGACTCGGTGATTGAGGACAAGACCATCGAGCTCATGTTACCGAAGTGCATGTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519693.5 ENST00000520376.1 ENST00000523843.5 |
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| CDS CAA 72 bp | TGCTTTCTAGTGATGAGTGCCATGAGCTCGATGGTCTaGTCCTCAATCACCGAGTCGGGCTCCATGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: CFLVMSAMSSMV*SSITESGSMAA Trigger: GGCCGCCATGGAGCCCGACTCGGTGATTGAGGACAAGACCATCGAGCTCATGGCACTCATCACTAGAAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522507.1 |
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| CDS CAA 72 bp | TCTTCCATAACTGAAGTGTTCATGAGCTCGATGGTCTaGTCCTCAATCACCGAGTCGGGCTCCATGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSITEVFMSSMV*SSITESGSMAA Trigger: GGCCGCCATGGAGCCCGACTCGGTGATTGAGGACAAGACCATCGAGCTCATGAACACTTCAGTTATGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296933.10 |
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| CDS GCA 72 bp | TTACTTATCTGGAGACATCTGACACTGGGCATGCTCTaGAGGCAACTCAGTGCGCACATGCTCTCTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLIWRHLTLGML*RQLSAHMLSTR Trigger: CCTGGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTCAGATGTCTCCAGATAAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265094.9 |
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| CDS CAA 72 bp | GATGATGTTCCATTACTTATCATGAGCTCGATGGTCTaGTCCTCAATCACCGAGTCGGGCTCCATGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: DDVPLLIMSSMV*SSITESGSMAA Trigger: GGCCGCCATGGAGCCCGACTCGGTGATTGAGGACAAGACCATCGAGCTCATGATAAGTAATGGAACATCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393802.6 |
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| CDS CAA 90 bp | TTGCAGCCTCAGGTTTCAGGCCTGAGGCCTGAGCCTGGGTCTTGTTaGCTGTGGAAGTACTTAGAACATGAGTCTTGTTTGCTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LQPQVSGLRPEPGSC*LWKYLEHESCLLWK Trigger: CTTCCACAGCAAACAAGACTCATGTTCTAAGTACTTCCACAGCAAACAAGACCCAGGCTCAGGCCTCAGGCCTGAAACCTGAGGCTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522891.1 |
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| CDS CAA 72 bp | GAAGAGAGATTAGAAATCAGAAGCTGGTTTGTCAATTaGCAGCCTCAGGTTTCAGGCCTGAGGCCTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EERLEIRSWFVN*QPQVSGLRPEP Trigger: AGGCTCAGGCCTCAGGCCTGAAACCTGAGGCTGCAAATTGACAAACCAGCTTCTGATTTCTAATCTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522891.1 |
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| CDS TCA 72 bp | GCCTGGGTCTTGTTTGCTGTGGAAGTACTTAGAACATaGGTCTTGTTTGCTGTGGAAGTACTTAGAACACGG | + |
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Preference number: 6 (lower is better) Translates to: AWVLFAVEVLRT*VLFAVEVLRTR Trigger: CCGTGTTCTAAGTACTTCCACAGCAAACAAGACTCATGTTCTAAGTACTTCCACAGCAAACAAGACCCAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522891.1 |
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| CDS GCA 72 bp | AATCATCTTTCTCTTCCAATCAGAAGCTCTTGTGAGTaGTTTCTAGTGATGAGTGCCATGAGCTCGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: NHLSLPIRSSCE*FLVMSAMSSMV Trigger: GACCATCGAGCTCATGGCACTCATCACTAGAAAGCACTCACAAGAGCTTCTGATTGGAAGAGAAAGATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522507.1 |
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| CDS TCA 72 bp | AGGACACAGCCAAGTAAGACTTCTCATCTTCCAGACTaGACACGCTTAGTAATAATCAAAACATTCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: RTQPSKTSHLPD*TRLVIIKTFCH Trigger: ATGACAGAATGTTTTGATTATTACTAAGCGTGTTCAGTCTGGAAGATGAGAAGTCTTACTTGGCTGTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518106.1 ENST00000522376.1 |
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