RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO9 (Homo sapiens)

Ensembl gene IDs: ENSG00000112146

Ensembl transcript IDs: ENST00000244426.10, ENST00000323557.12, ENST00000370939.7, ENST00000459845.6, ENST00000461222.1, ENST00000468481.1, ENST00000473318.1, ENST00000473337.6, ENST00000474457.1, ENST00000480463.6, ENST00000484436.7, ENST00000484812.1, ENST00000498744.5

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCTGATGCATTaGAATATTAGGATACTCAAGCAGAAGACGACTTATGTGACAGAA +
Preference number: 1 (lower is better)
Translates to: AGNKMLIQWSAPLMH*NIRILKQKTTYVTE
Trigger: TTCTGTCACATAAGTCGTCTTCTGCTTGAGTATCCTAATATTTCAATGCATCAGGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR TCA 90 bp TATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCTaGTGCATTGAAATATTAGGATACTCAAGCAGAAGACGACTTATG +
Preference number: 1 (lower is better)
Translates to: YAMREIKCLSSGALP*CIEILGYSSRRRLM
Trigger: CATAAGTCGTCTTCTGCTTGAGTATCCTAATATTTCAATGCATCAGGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR TCA 90 bp CAGGTTTACATGATCCTCTACTATTCTTTTGTGAAGAATGACAACTaGGTCAGTTGGTTGAGCTTGAAGTGTTCCAGTCCTAAGGGATTC +
Preference number: 1 (lower is better)
Translates to: QVYMILYYSFVKNDN*VSWLSLKCSSPKGF
Trigger: GAATCCCTTAGGACTGGAACACTTCAAGCTCAACCAACTGACTCAGTTGTCATTCTTCACAAAAGAATAGTAGAGGATCATGTAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR GCA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTTCCTAGGTGGCTGGTaGTCTCCCCCAACTTTCATA +
Preference number: 2 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITFLGGW*SPPTFI
Trigger: TATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAA...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR GCA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAAATGCGGGAAATAAAATaGTTATCCAGTGGAGCGCTC +
Preference number: 2 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTEMREIK*LSSGAL
Trigger: GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCAT...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR GCA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTATGCGGGAAATAAAATaGTTATCCAGTGGAGCGCTC +
Preference number: 2 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTMREIK*LSSGAL
Trigger: GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCAT...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR CCA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGAAAATGCTTATCCAGTaGAGCGCTCCCCTGATGCAT +
Preference number: 2 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITKMLIQ*SAPLMH
Trigger: ATGCATCAGGGGAGCGCTCCACTGGATAAGCATTTT...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR CCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTGTTTTCCTAGGTGGCTaGTGCTCTCCCCCAACTTTC +
Preference number: 2 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTVFLGG*CSPPTF
Trigger: GAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAAC...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR CCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGTACAGTTTTCCTAGGTaGCTGGTGCTCTCCCCCAAC +
Preference number: 2 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLYSFPR*LVLSPN
Trigger: GTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTA...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR TCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTAGTGGAGCGCTCCCCTaGTGCATTGAAATATTAGGA +
Preference number: 2 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTSGALP*CIEILG
Trigger: TCCTAATATTTCAATGCATCAGGGGAGCGCTCCACT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR CAA 90 bp AACTTGGTATCCACCATCTGCAACAGATCATTCAATCTAGGGATGTaGCAGAACAACAGGGACTCCTCAAATCTCACTTTCCTTAGGAAT +
Preference number: 2 (lower is better)
Translates to: NLVSTICNRSFNLGM*QNNRDSSNLTFLRN
Trigger: ATTCCTAAGGAAAGTGAGATTTGAGGAGTCCCTGTTGTTCTGCAACATCCCTAGATTGAATGATCTGTTGCAGATGGTGGATACCAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR GCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGCTTAAGCTATTCTCCTaGATCAGCCTCCCAAATAGC +
Preference number: 2 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLLKLFS*ISLPNS
Trigger: GCTATTTGGGAGGCTGATGCAGGAGAATAGCTTAAG...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR TCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTAGCTCCCCTGATGCATTaGAATATTAGGATACTCAAG +
Preference number: 2 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLAPLMH*NIRILK
Trigger: CTTGAGTATCCTAATATTTCAATGCATCAGGGGAGC...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR CAA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGGTCAGTTGGTTGAGCTaGAAGTGTTCCAGTCCTAAG +
Preference number: 3 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITVSWLS*KCSSPK
Trigger: CTTAGGACTGGAACACTTCAAGCTCAACCAACTGAC...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR TCA 72 bp TGGTGCTCAGGCCAGATTCCCTCTGAGGATATCTTCTaGACACAGTTCCAGCACGATCTGAAATGTAATTTC +
Preference number: 3 (lower is better)
Translates to: WCSGQIPSEDIF*TQFQHDLKCNF
Trigger: GAAATTACATTTCAGATCGTGCTGGAACTGTGTTCAGAAGATATCCTCAGAGGGAATCTGGCCTGAGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR CAA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGCTATCCCATACTGAATaGTGGGAACCTATGAAGTGT +
Preference number: 3 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITLSHTE*WEPMKC
Trigger: ACACTTCATAGGTTCCCACAATTCAGTATGGGATAG...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR TCA 72 bp CGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCTaGTGCATTGAAATATTAGGATACTCAAGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: REIKCLSSGALP*CIEILGYSSRR
Trigger: TCTTCTGCTTGAGTATCCTAATATTTCAATGCATCAGGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
3UTR TCA 72 bp AAAATGCTTATCCAGTGGAGCGCTCCCCTGATGCATTaGAATATTAGGATACTCAAGCAGAAGACGACTTAT +
Preference number: 3 (lower is better)
Translates to: KMLIQWSAPLMH*NIRILKQKTTY
Trigger: ATAAGTCGTCTTCTGCTTGAGTATCCTAATATTTCAATGCATCAGGGGAGCGCTCCACTGGATAAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR-3UTR CAA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGTTTCTACGGCAGGATTaGCAAAGACCAGAAGAAAAA +
Preference number: 3 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKFLRQD*QRPEEK
Trigger: TTTTTCTTCTGGTCTTTGCAAATCCTGCCGTAGAAA...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTTGGAGGGACGCCCGTTaGCAGCCGAGGCGGGGGATT +
Preference number: 4 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTWRDAR*QPRRGI
Trigger: AATCCCCCGCCTCGGCTGGCAACGGGCGTCCCTCCA...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR GCA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTCCCCCGGAGGAGGGGTaGTGGGTGTCCGGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTPPEEG*WVSGCL
Trigger: TAGACACCCGGACACCCAGCACCCCTCCTCCGGGGG...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR GCA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTCCTCAGCTTCTGCCATaGTGGCGGGGCGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTPQLLP*WRGGLL
Trigger: CAGCAGGCCGCCCCGCCAGCATGGCAGAAGCTGAGG...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR CCA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTCACTCCCAGCCCCCATaGGCCCCAAGCACCCTCACC +
Preference number: 4 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTHSQPP*APSTLT
Trigger: GGTGAGGGTGCTTGGGGCCCATGGGGGCTGGGAGTG...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGCGGGGACTCGGGGAGTaGAGGGACGCCCGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITRGLGE*RDARCQ
Trigger: CTGGCAACGGGCGTCCCTCCACTCCCCGAGTCCCCG...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR GCA 90 bp GTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCAGCTGCCCCCTCAGCTaGGGAAACCTGCGCCGACGC +
Preference number: 4 (lower is better)
Translates to: VQKHYAMREIKCLSSGALSCPLS*GNLRRR
Trigger: GCGTCGGCGCAGGTTTCCGCAGCTGAGGGGGCAGCT...GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR GCA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGGGCAGCGGCAATAACTaGGGGCCCGGCGTACGGCAG +
Preference number: 4 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITGSGNN*GPGVRQ
Trigger: CTGCCGTACGCCGGGCCCGCAGTTATTGCCGCTGCC...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR CCA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTGAGCGTCAGCCCTACTaGAGACCCCGGACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSAERQPY*RPRTPP
Trigger: CGGCGGCGTCCGGGGTCTCCAGTAGGGCTGACGCTC...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR GCA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCGAGGCGGGGGATTGTaGGAGCACCGGAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSARGGGL*EHRSVS
Trigger: GCTGACGCTCCGGTGCTCGCACAATCCCCCGCCTCG...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR TCA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAAGGCTGGGGGTGTAACTaGAGTCTACACTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTEGWGCN*SLHSQP
Trigger: GGGCTGGGAGTGTAGACTTCAGTTACACCCCCAGCC...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTCGAGGGGCTCTCCGTaGCCCCTCTGCACCGCCCCC +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLSRGSP*PLCTAP
Trigger: GGGGGCGGTGCAGAGGGGGCACGGAGAGCCCCTCGA...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR CCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCGTAGCCTCAGCCTCCTaGCTAAGTGATCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPVASAS*LSDPPA
Trigger: GGCAGGAGGATCACTTAGCCAGGAGGCTGAGGCTAC...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCCACTCCCAGCCCCCATaGGCCCCAAGCACCCTCACC +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSHSQPP*APSTLT
Trigger: GGTGAGGGTGCTTGGGGCCCATGGGGGCTGGGAGTG...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCAGCTTCTGCCATGCTaGCGGGGCGGCCTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRQLLPC*RGGLLR
Trigger: GCGCAGCAGGCCGCCCCGCCAGCATGGCAGAAGCTG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR TCA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGCGTGGAACAATGGACTaGGGCTCTTCAGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITRGTMD*GSSGVV
Trigger: GACAACCCCTGAAGAGCCTCAGTCCATTGTTCCACG...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCTGGTCTTGGACTCCTaGGCTCAGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSALVLDS*AQVICL
Trigger: CAGGCAGATCACCTGAGCTCAGGAGTCCAAGACCAG...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGGGCTGGGGGTGTAACTaGAGTCTACACTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLGWGCN*SLHSQP
Trigger: GGGCTGGGAGTGTAGACTTCAGTTACACCCCCAGCC...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAAACGATCTTGGCTCACTaGAACTTCCACTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTETILAH*NFHFPG
Trigger: GCCTGGGAAGTGGAAGTTGCAGTGAGCCAAGATCGT...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCCCGGGTGTCTACTCCTaGCTGTCTCTGCAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSPGVYS*LSLQRS
Trigger: GCTCCGCTGCAGAGACAGGCAGGAGTAGACACCCGG...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR CCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCTTGCTCAGGCTGGAGTaGAATGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPLLRLE*NGTILA
Trigger: AGCCAAGATCGTGCCATTCCACTCCAGCCTGAGCAA...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGAGTCCTCGGAGCCTCTaGCTAGAGTCCCGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRSPRSL*LESRAR
Trigger: CCTGGCGCGGGACTCTAGCCAGAGGCTCCGAGGACT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS-3UTR TCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCCTCCTGGCTAAGTaGTCCTCCTGCCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWSLLAK*SSCLSL
Trigger: GAGGCTAAGGCAGGAGGATCACTTAGCCAGGAGGCT...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGCTCAGGCAATTCTCCTaGCCCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWLRQFS*PSLPSS
Trigger: GCTACTTGGGAGGCTGGGGCAGGAGAATTGCCTGAG...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCTCTGCCGATGTTTTCTaGAGAGAGCCTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPSADVF*REPLAA
Trigger: AGCAGCAAGAGGCTCTCTCCAGAAAACATCGGCAGA...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTTGCTCAGGCTGGAGTaGAATGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITLLRLE*NGTILA
Trigger: AGCCAAGATCGTGCCATTCCACTCCAGCCTGAGCAA...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTCCGGAGGAGGGGTGCTaGGTGTCCGGGTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLPEEGC*VSGCLL
Trigger: GAGTAGACACCCGGACACCCAGCACCCCTCCTCCGG...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS-3UTR TCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCTTAAGCACAGACTCCTaGAATGTGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPLSTDS*NVSCCW
Trigger: CCAGCAGCAACTCACATTTCAGGAGTCTGTGCTTAA...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCTCTCAAGCTCAGGCTaGCACAGTTTAAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: VQKHYAMREIKCLSSGALLSSSG*HSLSTD
Trigger: GTCTGTGCTTAAACTGTGTCAGCCTGAGCTTGAGAG...GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGCGTGGAACAATGGACTaGGGCTCTTCAGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLRGTMD*GSSGVV
Trigger: GACAACCCCTGAAGAGCCTCAGTCCATTGTTCCACG...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGAGCCTCCTGGCTAAGTaGTCCTCCTGCCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKSLLAK*SSCLSL
Trigger: GAGGCTAAGGCAGGAGGATCACTTAGCCAGGAGGCT...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCAGGCCAGATTCCCTCTaGGGATATCTTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPRPDSL*GYLLNT
Trigger: TGTGTTCAGAAGATATCCTCAGAGGGAATCTGGCCT...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCTGGAGAGAGCCTCTTaGTGCTCTGCAAGGTCGATT +
Preference number: 4 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSALERAS*CSARSI
Trigger: AATCGACCTTGCAGAGCAGCAAGAGGCTCTCTCCAG...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCGGGGTCTTGTTATGTTaGCCATGCTGGACTCAAACT +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPGVLLC*PCWTQT
Trigger: AGTTTGAGTCCAGCATGGGCAACATAACAAGACCCC...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGCTCAGGCAATTCTCCTaGCCCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKLRQFS*PSLPSS
Trigger: GCTACTTGGGAGGCTGGGGCAGGAGAATTGCCTGAG...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCAAAATGCTTATCCAGTaGAGCGCTCCCCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPKMLIQ*SAPLMH
Trigger: ATGCATCAGGGGAGCGCTCCACTGGATAAGCATTTT...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGACGTGGAACAATGGACTaGGGCTCTTCAGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGRGTMD*GSSGVV
Trigger: GACAACCCCTGAAGAGCCTCAGTCCATTGTTCCACG...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp GTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCTTGTTGAACCTCTGGTaGCCACTGGAACATAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQKHYAMREIKCLSSGALLLNLW*PLEHSC
Trigger: ACAGCTATGTTCCAGTGGTCACCAGAGGTTCAACAA...GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTACTGGTCTTGGACTCCTaGGCTCAGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLLVLDS*AQVICL
Trigger: CAGGCAGATCACCTGAGCTCAGGAGTCCAAGACCAG...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTACGATCTTGGCTCACTaGAACTTCCACTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTTILAH*NFHFPG
Trigger: GCCTGGGAAGTGGAAGTTGCAGTGAGCCAAGATCGT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAAAACGCCATCACCATCTaGAGACCGGGTATAAGTAAT +
Preference number: 4 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTENAITI*RPGISN
Trigger: ATTACTTATACCCGGTCTCCAGATGGTGATGGCGTT...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTACAGTGGTGCAATCTTaGCTCACTGTAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTTVVQS*LTVASA
Trigger: GGCTGAGGCTACAGTGAGCCAAGATTGCACCACTGT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGCAGGCTGGAGCACAGTaGTGCAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKQAGAQ*CNLGSL
Trigger: CAGTGAGCCAAGATTGCACCACTGTGCTCCAGCCTG...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTCGACAACTGCTCCAATaGTCTGAGGTCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTRQLLQ*SEVQVT
Trigger: AGTGACTTGGACCTCAGATCATTGGAGCAGTTGTCG...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCGTGGAACAATGGACTaGGGCTCTTCAGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRRGTMD*GSSGVV
Trigger: GACAACCCCTGAAGAGCCTCAGTCCATTGTTCCACG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAAGCAAATACTTTGGTCTaGTTGTCTGTGTCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTEANTLV*LSVSCD
Trigger: GTCACAAGACACAGACAATCAGACCAAAGTATTTGC...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGCTACAGAGGCCTTTCTaGGAAAGCTGTGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLLQRPF*ESCVAP
Trigger: AGGAGCTACACAGCTTTCTCAGAAAGGCCTCTGTAG...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTGTAGGACAAGAGATCTaGCATTTTGCTGTCATCATC +
Preference number: 4 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTVGQEI*HFAVII
Trigger: GATGATGACAGCAAAATGGCAGATCTCTTGTCCTAC...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGTTCCTAGGTGGCTGGTaGTCTCCCCCAACTTTCATA +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWFLGGW*SPPTFI
Trigger: TATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAA...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAAATATTTCAGGGTCTCTaGCACAGATGTAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTEIFQGL*HRCRIL
Trigger: GAGGATTCTACATCTGTGCCAGAGACCCTGAAATAT...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGTTTTCCTAGGTGGCTaGTGCTCTCCCCCAACTTTC +
Preference number: 4 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSVFLGG*CSPPTF
Trigger: GAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAAC...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTGTAGCCTCAGCCTCCTaGCTAAGTGATCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLVASAS*LSDPPA
Trigger: GGCAGGAGGATCACTTAGCCAGGAGGCTGAGGCTAC...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTACAGGCTGGAGCACAGTaGTGCAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLQAGAQ*CNLGSL
Trigger: CAGTGAGCCAAGATTGCACCACTGTGCTCCAGCCTG...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCCAGGGCATTCTTATGTaGGGAGAGAAAGCTTACAAA +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPQGILM*GEKAYK
Trigger: TTTGTAAGCTTTCTCTCCCCACATAAGAATGCCCTG...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
3UTR CAA 72 bp TCCACCATCTGCAACAGATCATTCAATCTAGGGATGTaGCAGAACAACAGGGACTCCTCAAATCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: STICNRSFNLGM*QNNRDSSNLTF
Trigger: GAAAGTGAGATTTGAGGAGTCCCTGTTGTTCTGCAACATCCCTAGATTGAATGATCTGTTGCAGATGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTAGTTCAAACATCCACTaGGCTCGGAACATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTSSNIH*ARNIWS
Trigger: ACTCCAGATGTTCCGAGCTCAGTGGATGTTTGAACT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGACAGACTCCTGAAATGTaGGTTGCTGCTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGQTPEM*VAAGSR
Trigger: CCTACTTCCAGCAGCAACTCACATTTCAGGAGTCTG...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTTTAAGCACAGACTCCTaGAATGTGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTLSTDS*NVSCCW
Trigger: CCAGCAGCAACTCACATTTCAGGAGTCTGTGCTTAA...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGACTCTCAAGCTCAGGCTaGCACAGTTTAAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGLSSSG*HSLSTD
Trigger: GTCTGTGCTTAAACTGTGTCAGCCTGAGCTTGAGAG...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGGCAAATACTTTGGTCTaGTTGTCTGTGTCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITANTLV*LSVSCD
Trigger: GTCACAAGACACAGACAATCAGACCAAAGTATTTGC...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTAGTGGCTGCAGATATTaGTTTCTGAAAGTACATGAG +
Preference number: 4 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTSGCRY*FLKVHE
Trigger: CTCATGTACTTTCAGAAATCAATATCTGCAGCCACT...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGGCCAGATTCCCTCTaGGGATATCTTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWRPDSL*GYLLNT
Trigger: TGTGTTCAGAAGATATCCTCAGAGGGAATCTGGCCT...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGAGAGAGCCTCTTGCTaGTCTGCAAGGTCGATTTTC +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGERASC*SARSIF
Trigger: GAAAATCGACCTTGCAGAGCAGCAAGAGGCTCTCTC...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTACTGGAGAGAGCCTCTTaGTGCTCTGCAAGGTCGATT +
Preference number: 4 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLLERAS*CSARSI
Trigger: AATCGACCTTGCAGAGCAGCAAGAGGCTCTCTCCAG...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCTGGAGAGAGCCTCTTaGTGCTCTGCAAGGTCGATT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRLERAS*CSARSI
Trigger: AATCGACCTTGCAGAGCAGCAAGAGGCTCTCTCCAG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCACACCAGCGACAACTaGTCCAATGATCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRHTSDN*SNDLRS
Trigger: GGACCTCAGATCATTGGAGCAGTTGTCGCTGGTGTG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTACACACCAGCGACAACTaGTCCAATGATCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLHTSDN*SNDLRS
Trigger: GGACCTCAGATCATTGGAGCAGTTGTCGCTGGTGTG...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAGATGTAGAATCCTCTaGACACCAGCGACAACTGCT +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLRCRIL*TPATTA
Trigger: AGCAGTTGTCGCTGGTGTGCAGAGGATTCTACATCT...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTATGCGGGAAATAAAATaGTTATCCAGTGGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSAMREIK*LSSGAL
Trigger: GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCAT...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR GCA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAATTCTACGGCAGGATTTaGAAAGACCAGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTEFYGRI*KDQKKK
Trigger: CTTTTTCTTCTGGTCTTTGCAAATCCTGCCGTAGAA...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGATATTTCAGGGTCTCTaGCACAGATGTAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITIFQGL*HRCRIL
Trigger: GAGGATTCTACATCTGTGCCAGAGACCCTGAAATAT...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGATGTAGCTCCTTACTCTaGCGAAGAACAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGCSSLL*RRTRGC
Trigger: ACACCCCCTTGTTCTTCGCCAGAGTAAGGAGCTACA...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAAAATGCTTATCCAGTaGAGCGCTCCCCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWKMLIQ*SAPLMH
Trigger: ATGCATCAGGGGAGCGCTCCACTGGATAAGCATTTT...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGTTTTCCTAGGTGGCTaGTGCTCTCCCCCAACTTTC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRVFLGG*CSPPTF
Trigger: GAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAAC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGACAGTGGTGCAATCTTaGCTCACTGTAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRTVVQS*LTVASA
Trigger: GGCTGAGGCTACAGTGAGCCAAGATTGCACCACTGT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp GTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCAGGGCATTCTTATGTaGGGAGAGAAAGCTTACAAA +
Preference number: 4 (lower is better)
Translates to: VQKHYAMREIKCLSSGALQGILM*GEKAYK
Trigger: TTTGTAAGCTTTCTCTCCCCACATAAGAATGCCCTG...GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGGCTGTAGGGGGCACTTaGGACCTTACTATTAATTTC +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWAVGGT*DLTINF
Trigger: GAAATTAATAGTAAGGTCTCAAGTGCCCCCTACAGC...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000244426.10
CDS-3UTR TCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTACAGACTCCTGAAATGTaGGTTGCTGCTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLQTPEM*VAAGSR
Trigger: CCTACTTCCAGCAGCAACTCACATTTCAGGAGTCTG...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCAGACTCCTGAAATGTaGGTTGCTGCTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRQTPEM*VAAGSR
Trigger: CCTACTTCCAGCAGCAACTCACATTTCAGGAGTCTG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCTCTCAAGCTCAGGCTaGCACAGTTTAAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRLSSSG*HSLSTD
Trigger: GTCTGTGCTTAAACTGTGTCAGCCTGAGCTTGAGAG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCGACAACTGCTCCAATaGTCTGAGGTCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRRQLLQ*SEVQVT
Trigger: AGTGACTTGGACCTCAGATCATTGGAGCAGTTGTCG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGATTGTCTGTGTCTTGTaGCAAGCGATAGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKIVCVL*QAIVTQ
Trigger: CTGGGTCACTATCGCTTGTCACAAGACACAGACAAT...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGTTGTTGAACCTCTGGTaGCCACTGGAACATAGCTGT +
Preference number: 4 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKLLNLW*PLEHSC
Trigger: ACAGCTATGTTCCAGTGGTCACCAGAGGTTCAACAA...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGATTGTTGAACCTCTGGTaGCCACTGGAACATAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGLLNLW*PLEHSC
Trigger: ACAGCTATGTTCCAGTGGTCACCAGAGGTTCAACAA...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCTACAGAGGCCTTTCTaGGAAAGCTGTGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRLQRPF*ESCVAP
Trigger: AGGAGCTACACAGCTTTCTCAGAAAGGCCTCTGTAG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATAGAGGACTGGACTTaGGGCTCTACAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRIEDWT*GSTEAF
Trigger: AAAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAAGTGGAGCGCTCCCCTaGTGCATTGAAATATTAGGA +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGSGALP*CIEILG
Trigger: TCCTAATATTTCAATGCATCAGGGGAGCGCTCCACT...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTAAGCCTATCCCATACTaGATTGTGGGAACCTATGAA +
Preference number: 4 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSAKPIPY*IVGTYE
Trigger: TTCATAGGTTCCCACAATTCAGTATGGGATAGGCTT...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGATCTGGAGTTGTGCCTaGAGATCTGTTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKIWSCA*RSVSAG
Trigger: TCCTGCTGAAACAGATCTGCAGGCACAACTCCAGAT...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGAACATCTGGAGTTGTaGCTGCAGATCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSEHLEL*LQICFS
Trigger: GCTGAAACAGATCTGCAGGCACAACTCCAGATGTTC...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGAGAGAGCCTCTTGCTaGTCTGCAAGGTCGATTTTC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRERASC*SARSIF
Trigger: GAAAATCGACCTTGCAGAGCAGCAAGAGGCTCTCTC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTATATGTGAATCTGACTaGTCTCAAGCTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTICESD*SQAQAD
Trigger: GTCAGCCTGAGCTTGAGAGCAGTCAGATTCACATAT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTCTGCCGATGTTTTCTaGAGAGAGCCTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRSADVF*REPLAA
Trigger: AGCAGCAAGAGGCTCTCTCCAGAAAACATCGGCAGA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CCA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTTTAAACGTGGAACAATaGACTGAGGCTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSLNVEQ*TEALQG
Trigger: CCCCTGAAGAGCCTCAGTCCATTGTTCCACGTTTAA...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTATGTAGCTCCTTACTCTaGCGAAGAACAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLCSSLL*RRTRGC
Trigger: ACACCCCCTTGTTCTTCGCCAGAGTAAGGAGCTACA...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTGTAGCTCCTTACTCTaGCGAAGAACAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRCSSLL*RRTRGC
Trigger: ACACCCCCTTGTTCTTCGCCAGAGTAAGGAGCTACA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTACAGTTTTCCTAGGTaGCTGGTGCTCTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLYSFPR*LVLSPN
Trigger: GTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTA...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATCGAACTGGACGCTTaGGACAGTCGCTACAAAGTC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRIELDA*DSRYKV
Trigger: GACTTTGTAGCGACTGTCCCAAGCGTCCAGTTCGAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTTAAGCACAGACTCCTaGAATGTGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRLSTDS*NVSCCW
Trigger: CCAGCAGCAACTCACATTTCAGGAGTCTGTGCTTAA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATTGTCTGTGTCTTGTaGCAAGCGATAGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRIVCVL*QAIVTQ
Trigger: CTGGGTCACTATCGCTTGTCACAAGACACAGACAAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTAATTGTCTGTGTCTTGTaGCAAGCGATAGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLIVCVL*QAIVTQ
Trigger: CTGGGTCACTATCGCTTGTCACAAGACACAGACAAT...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTTGTTGAACCTCTGGTaGCCACTGGAACATAGCTGT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRLLNLW*PLEHSC
Trigger: ACAGCTATGTTCCAGTGGTCACCAGAGGTTCAACAA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTTGCAGTCTCACCAGTTaGTTTGTAAGTAATGTGACA +
Preference number: 4 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSACSLTS*FVSNVT
Trigger: TGTCACATTACTTACAAATCAACTGGTGAGACTGCA...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAAATAGAGGACTGGACTTaGGGCTCTACAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQIEDWT*GSTEAF
Trigger: AAAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTAT...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTATAGAGGACTGGACTTaGGGCTCTACAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLIEDWT*GSTEAF
Trigger: AAAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTAT...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGGCTCCCCTGATGCATTaGAATATTAGGATACTCAAG +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLAPLMH*NIRILK
Trigger: CTTGAGTATCCTAATATTTCAATGCATCAGGGGAGC...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGATAAATACCATAGGTTaGGAGTGGTTAGTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLINTIG*EWLVEG
Trigger: GCCCTCTACTAACCACTCTCAACCTATGGTATTTAT...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTATAAATACCATAGGTTaGGAGTGGTTAGTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTINTIG*EWLVEG
Trigger: GCCCTCTACTAACCACTCTCAACCTATGGTATTTAT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTACACCAGTTGCCCTCTaGAATCTACATTTCTCATTC +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTTPVAL*NLHFSF
Trigger: GAATGAGAAATGTAGATTGCAGAGGGCAACTGGTGT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244426.10
CDS-3UTR GCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTAATCTGGAGTTGTGCCTaGAGATCTGTTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLIWSCA*RSVSAG
Trigger: TCCTGCTGAAACAGATCTGCAGGCACAACTCCAGAT...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATCTGGAGTTGTGCCTaGAGATCTGTTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRIWSCA*RSVSAG
Trigger: TCCTGCTGAAACAGATCTGCAGGCACAACTCCAGAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGAACATCTGGAGTTGTaGCTGCAGATCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLREHLEL*LQICFS
Trigger: GCTGAAACAGATCTGCAGGCACAACTCCAGATGTTC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCATATGTGAATCTGACTaGTCTCAAGCTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSICESD*SQAQAD
Trigger: GTCAGCCTGAGCTTGAGAGCAGTCAGATTCACATAT...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGAGATGTAGAATCCTCTaGACACCAGCGACAACTGCT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRRCRIL*TPATTA
Trigger: AGCAGTTGTCGCTGGTGTGCAGAGGATTCTACATCT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGATGAAAACTCTGATCTaGTTCTTGTACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLMKTLI*FLYRDT
Trigger: CGTGTCCCTGTACAAGAAGCAGATCAGAGTTTTCAT...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTATGAAAACTCTGATCTaGTTCTTGTACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTMKTLI*FLYRDT
Trigger: CGTGTCCCTGTACAAGAAGCAGATCAGAGTTTTCAT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGATGAAAACTCTGATCTaGTTCTTGTACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWMKTLI*FLYRDT
Trigger: CGTGTCCCTGTACAAGAAGCAGATCAGAGTTTTCAT...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR GCA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAAAGTGCAAAAACATTATaGCATGCGGGAAATAAAATG +
Preference number: 4 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTESAKTL*HAGNKM
Trigger: CATTTTATTTCCCGCATGGCATAATGTTTTTGCACT...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp CAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCCCCAGTGCAAAAACATTATaGCATGCGGGAAATAAAATG +
Preference number: 4 (lower is better)
Translates to: QKHYAMREIKCLSSGALPSAKTL*HAGNKM
Trigger: CATTTTATTTCCCGCATGGCATAATGTTTTTGCACT...GGGGAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR GCA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTCTTAAGCTATTCTCCTaGATCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSLKLFS*ISLPNS
Trigger: GCTATTTGGGAGGCTGATGCAGGAGAATAGCTTAAG...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTTCCTAGGTGGCTGGTaGTCTCCCCCAACTTTCATA +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLFLGGW*SPPTFI
Trigger: TATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAA...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGACACACTTCTCAGATTaGTACAAAAGGCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWTHFSD*YKRPTS
Trigger: AGAGGTTGGCCTTTTGTAGCAATCTGAGAAGTGTGT...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGTCCCGCGCCAGGAATaGAGGAAAACAGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRVPRQE*RKTVKF
Trigger: AAATTTCACTGTTTTCCTGCATTCCTGGCGCGGGAC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTTAAACGTGGAACAATaGACTGAGGCTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRLNVEQ*TEALQG
Trigger: CCCCTGAAGAGCCTCAGTCCATTGTTCCACGTTTAA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGATCTGCTCATAAATTCTaGCGAAGAACAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGSAHKF*RRTRGC
Trigger: ACACCCCCTTGTTCTTCGCCAGAATTTATGAGCAGA...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484436.7
CDS-3UTR TCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGCATCATCATCTGCTCTaGCAGTATCAGAATGACAAT +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLHHHLL*QYQNDN
Trigger: ATTGTCATTCTGATACTGTCAGAGCAGATGATGATG...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGAGACTGTTCCCCTTaGCGAATATATGTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWRDCSP*RIYVVL
Trigger: TAAAACCACATATATTCGTCAAGGGGAACAGTCTCT...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAGAGACTGTTCCCCTTaGCGAATATATGTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLRDCSP*RIYVVL
Trigger: TAAAACCACATATATTCGTCAAGGGGAACAGTCTCT...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTATTGTCTGTGTCTTGTaGCAAGCGATAGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLIVCVL*QAIVTQ
Trigger: CTGGGTCACTATCGCTTGTCACAAGACACAGACAAT...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTTGCAGTCTCACCAGTTaGTTTGTAAGTAATGTGACA +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTCSLTS*FVSNVT
Trigger: TGTCACATTACTTACAAATCAACTGGTGAGACTGCA...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCTCCCCTGATGCATTaGAATATTAGGATACTCAAG +
Preference number: 4 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGAPLMH*NIRILK
Trigger: CTTGAGTATCCTAATATTTCAATGCATCAGGGGAGC...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTAGTGGAGCGCTCCCCTaGTGCATTGAAATATTAGGA +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLSGALP*CIEILG
Trigger: TCCTAATATTTCAATGCATCAGGGGAGCGCTCCACT...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTAAGCCTATCCCATACTaGATTGTGGGAACCTATGAA +
Preference number: 4 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSKPIPY*IVGTYE
Trigger: TTCATAGGTTCCCACAATTCAGTATGGGATAGGCTT...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTATCTGAGGATATCTTCTaGACACAGTTCCAGCACGAT +
Preference number: 4 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLSEDIF*TQFQHD
Trigger: ATCGTGCTGGAACTGTGTTCAGAAGATATCCTCAGA...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTGAACATCTGGAGTTGTaGCTGCAGATCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLEHLEL*LQICFS
Trigger: GCTGAAACAGATCTGCAGGCACAACTCCAGATGTTC...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGTTTTCCTTTGGTATCTaGCGATGTTTTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWFSFGI*RCFLER
Trigger: TCTCTCCAGAAAACATCGGCAGATACCAAAGGAAAA...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATATGTGAATCTGACTaGTCTCAAGCTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRICESD*SQAQAD
Trigger: GTCAGCCTGAGCTTGAGAGCAGTCAGATTCACATAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp GTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCAGTGCAAAAACATTATaGCATGCGGGAAATAAAATG +
Preference number: 4 (lower is better)
Translates to: VQKHYAMREIKCLSSGALSAKTL*HAGNKM
Trigger: CATTTTATTTCCCGCATGGCATAATGTTTTTGCACT...GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR GCA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAAGGGGTCTTGTTATGTTaGCCATGCTGGACTCAAACT +
Preference number: 4 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQGVLLC*PCWTQT
Trigger: AGTTTGAGTCCAGCATGGGCAACATAACAAGACCCC...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGCATATATTGGTAAGGTaGCTACATGAGGTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWHILVR*LHEVSV
Trigger: AACACTGACCTCATGTAGGCACCTTACCAATATATG...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTTAAACGTGGAACAATaGACTGAGGCTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLLNVEQ*TEALQG
Trigger: CCCCTGAAGAGCCTCAGTCCATTGTTCCACGTTTAA...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCCATCATCATCTGCTCTaGCAGTATCAGAATGACAAT +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSHHHLL*QYQNDN
Trigger: ATTGTCATTCTGATACTGTCAGAGCAGATGATGATG...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTTATATGTGGTTTTACTaGTATACACGCCATCAAACC +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTYMWFY*YTRHQT
Trigger: GGTTTGATGGCGTGTATATCAGTAAAACCACATATA...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGCAAATACTTTGGTCTaGTTGTCTGTGTCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRANTLV*LSVSCD
Trigger: GTCACAAGACACAGACAATCAGACCAAAGTATTTGC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCTGCAGTCTCACCAGTTaGTTTGTAAGTAATGTGACA +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSCSLTS*FVSNVT
Trigger: TGTCACATTACTTACAAATCAACTGGTGAGACTGCA...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGAAGACGACTTATGTaGCAGAAATCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWRRRLM*QKSAHK
Trigger: TTTATGAGCAGATTTCTGTCACATAAGTCGTCTTCT...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGTTCTTTTGTGAAGAATaGCAACTGAGTCAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLFFCEE*QLSQLV
Trigger: AACCAACTGACTCAGTTGTCATTCTTCACAAAAGAA...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCAGTGGCTGCAGATATTaGTTTCTGAAAGTACATGAG +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSSGCRY*FLKVHE
Trigger: CTCATGTACTTTCAGAAATCAATATCTGCAGCCACT...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAATCTGAGGATATCTTCTaGACACAGTTCCAGCACGAT +
Preference number: 4 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQSEDIF*TQFQHD
Trigger: ATCGTGCTGGAACTGTGTTCAGAAGATATCCTCAGA...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTAAGCCTCTTGCTGCTCTaGAAGGTCGATTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLSLLLL*KVDFLN
Trigger: ATTTAGAAAATCGACCTTGCAGAGCAGCAAGAGGCT...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGAGCCTCTTGCTGCTCTaGAAGGTCGATTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRSLLLL*KVDFLN
Trigger: ATTTAGAAAATCGACCTTGCAGAGCAGCAAGAGGCT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTAGTAGGACAAGAGATCTaGCATTTTGCTGTCATCATC +
Preference number: 4 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLVGQEI*HFAVII
Trigger: GATGATGACAGCAAAATGGCAGATCTCTTGTCCTAC...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGTAGGACAAGAGATCTaGCATTTTGCTGTCATCATC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRVGQEI*HFAVII
Trigger: GATGATGACAGCAAAATGGCAGATCTCTTGTCCTAC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATGAAAACTCTGATCTaGTTCTTGTACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRMKTLI*FLYRDT
Trigger: CGTGTCCCTGTACAAGAAGCAGATCAGAGTTTTCAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAACTTAAGCTATTCTCCTaGATCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQLKLFS*ISLPNS
Trigger: GCTATTTGGGAGGCTGATGCAGGAGAATAGCTTAAG...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTCATATATTGGTAAGGTaGCTACATGAGGTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSHILVR*LHEVSV
Trigger: AACACTGACCTCATGTAGGCACCTTACCAATATATG...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTTTGGTATCCACCATCTaGAACAGATCATTCAATCTA +
Preference number: 4 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTLVSTI*NRSFNL
Trigger: TAGATTGAATGATCTGTTGCAGATGGTGGATACCAA...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTTTCTACGGCAGGATTTaGAAAGACCAGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSFYGRI*KDQKKK
Trigger: CTTTTTCTTCTGGTCTTTGCAAATCCTGCCGTAGAA...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATATTTCAGGGTCTCTaGCACAGATGTAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRIFQGL*HRCRIL
Trigger: GAGGATTCTACATCTGTGCCAGAGACCCTGAAATAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCATCATCATCTGCTCTaGCAGTATCAGAATGACAAT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRHHHLL*QYQNDN
Trigger: ATTGTCATTCTGATACTGTCAGAGCAGATGATGATG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGAGAGACTGTTCCCCTTaGCGAATATATGTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRRDCSP*RIYVVL
Trigger: TAAAACCACATATATTCGTCAAGGGGAACAGTCTCT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAAGCAAATACTTTGGTCTaGTTGTCTGTGTCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQANTLV*LSVSCD
Trigger: GTCACAAGACACAGACAATCAGACCAAAGTATTTGC...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTGCAGTCTCACCAGTTaGTTTGTAAGTAATGTGACA +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRCSLTS*FVSNVT
Trigger: TGTCACATTACTTACAAATCAACTGGTGAGACTGCA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCAGAAGACGACTTATGTaGCAGAAATCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSRRRLM*QKSAHK
Trigger: TTTATGAGCAGATTTCTGTCACATAAGTCGTCTTCT...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR TCA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAAGCTCCCCTGATGCATTaGAATATTAGGATACTCAAG +
Preference number: 4 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQAPLMH*NIRILK
Trigger: CTTGAGTATCCTAATATTTCAATGCATCAGGGGAGC...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR GCA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCTATAAACACACCAGTTaGCCTCTGCAATCTACATTT +
Preference number: 4 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSYKHTS*PLQSTF
Trigger: AAATGTAGATTGCAGAGGGCAACTGGTGTGTTTATA...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244426.10
CDS-3UTR GCA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTAGCCTCTTGCTGCTCTaGAAGGTCGATTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLSLLLL*KVDFLN
Trigger: ATTTAGAAAATCGACCTTGCAGAGCAGCAAGAGGCT...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTATTTTCCTTTGGTATCTaGCGATGTTTTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLFSFGI*RCFLER
Trigger: TCTCTCCAGAAAACATCGGCAGATACCAAAGGAAAA...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTTTTCCTTTGGTATCTaGCGATGTTTTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRFSFGI*RCFLER
Trigger: TCTCTCCAGAAAACATCGGCAGATACCAAAGGAAAA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR GCA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAAACACACTTCTCAGATTaGTACAAAAGGCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQTHFSD*YKRPTS
Trigger: AGAGGTTGGCCTTTTGTAGCAATCTGAGAAGTGTGT...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGTTCTTGTTTTCCTTTaGTATCTGCCGATGTTTTCT +
Preference number: 4 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSVLVFL*YLPMFS
Trigger: AGAAAACATCGGCAGATACCAAAGGAAAACAAGAAC...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTATATATGTGGTTTTACTaGTATACACGCCATCAAACC +
Preference number: 4 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLYMWFY*YTRHQT
Trigger: GGTTTGATGGCGTGTATATCAGTAAAACCACATATA...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTATATGTGGTTTTACTaGTATACACGCCATCAAACC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRYMWFY*YTRHQT
Trigger: GGTTTGATGGCGTGTATATCAGTAAAACCACATATA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATTCTTTTGTGAAGAATaGCAACTGAGTCAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLFFCEE*QLSQLV
Trigger: AACCAACTGACTCAGTTGTCATTCTTCACAAAAGAA...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR TCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGAATGCAGGAAAACAGTaGAATTTCTCAACAGTCACA +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRNAGKQ*NFSTVT
Trigger: TGTGACTGTTGAGAAATTTCACTGTTTTCCTGCATT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS-3UTR GCA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATTGGTATCCACCATCTaGAACAGATCATTCAATCTA +
Preference number: 4 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLLVSTI*NRSFNL
Trigger: TAGATTGAATGATCTGTTGCAGATGGTGGATACCAA...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGTTCTTGTTTTCCTTTaGTATCTGCCGATGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRVLVFL*YLPMFS
Trigger: AGAAAACATCGGCAGATACCAAAGGAAAACAAGAAC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR TCA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAAAGAAGACGACTTATGTaGCAGAAATCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQRRRLM*QKSAHK
Trigger: TTTATGAGCAGATTTCTGTCACATAAGTCGTCTTCT...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR GCA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATCTTCCTCAGCTTCTaGCTCAAAAATTTTTACAAC +
Preference number: 4 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRIFLSF*LKNFYN
Trigger: GTTGTAAAAATTTTTGAGGCAGAAGCTGAGGAAGAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370939.7
3UTR CAA 72 bp TGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAATaGTGGGAACCTATGAAGTGTCTCTTAATGTCAATT +
Preference number: 4 (lower is better)
Translates to: CMCFLKSLSHTE*WEPMKCLLMSI
Trigger: AATTGACATTAAGAGACACTTCATAGGTTCCCACAATTCAGTATGGGATAGGCTTTTTAAAAAGCACATACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS CCA 90 bp GGCAGCAACCAGAGCATGTGCAAGGCCCTCAGGCAGAAGTGTGACTaGTGGGCTCATCCAAGAGCCAGCAGGAGCACACAGCTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: GSNQSMCKALRQKCD*WAHPRASRSTQLWQ
Trigger: TTGCCACAGCTGTGTGCTCCTGCTGGCTCTTGGATGAGCCCACCAGTCACACTTCTGCCTGAGGGCCTTGCACATGCTCTGGTTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CCA 90 bp GTGGGCTCATCCAAGAGCCAGCAGGAGCACACAGCTGTGGCAAAGTaGGCATTGTGCAGAGGAAACTATGATGAGGCAGTCGGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: VGSSKSQQEHTAVAK*ALCRGNYDEAVGAG
Trigger: ACCTGCCCCGACTGCCTCATCATAGTTTCCTCTGCACAATGCCCACTTTGCCACAGCTGTGTGCTCCTGCTGGCTCTTGGATGAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CCA 90 bp AGCAACCAGAGCATGTGCAAGGCCCTCAGGCAGAAGTGTGACTGGTaGGCTCATCCAAGAGCCAGCAGGAGCACACAGCTGTGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: SNQSMCKALRQKCDW*AHPRASRSTQLWQS
Trigger: ACTTTGCCACAGCTGTGTGCTCCTGCTGGCTCTTGGATGAGCCCACCAGTCACACTTCTGCCTGAGGGCCTTGCACATGCTCTGGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS-3UTR CAA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGGTGGAGGGACGCCCGTaGCCAGCCGAGGCGGGGGAT +
Preference number: 5 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITVEGRP*PAEAGD
Trigger: ATCCCCCGCCTCGGCTGGCAACGGGCGTCCCTCCAC...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS CCA 90 bp TGTGACTGGTGGGCTCATCCAAGAGCCAGCAGGAGCACACAGCTGTaGCAAAGTGGGCATTGTGCAGAGGAAACTATGATGAGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: CDWWAHPRASRSTQL*QSGHCAEETMMRQS
Trigger: CGACTGCCTCATCATAGTTTCCTCTGCACAATGCCCACTTTGCCACAGCTGTGTGCTCCTGCTGGCTCTTGGATGAGCCCACCAGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS-3UTR CAA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAGCCGAGGCGGGGGATaGTGCGAGCACCGGAGCGTC +
Preference number: 5 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLSRGGG*CEHRSV
Trigger: GACGCTCCGGTGCTCGCACAATCCCCCGCCTCGGCT...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS GCA 90 bp ATCATAGTGATGGGGATAAGTATCTCAGGCAGCAACCAGAGCATGTaGAAGGCCCTCAGGCAGAAGTGTGACTGGTGGGCTCATCCAAGA +
Preference number: 5 (lower is better)
Translates to: IIVMGISISGSNQSM*KALRQKCDWWAHPR
Trigger: TCTTGGATGAGCCCACCAGTCACACTTCTGCCTGAGGGCCTTGCACATGCTCTGGTTGCTGCCTGAGATACTTATCCCCATCACTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CCA 90 bp CTTAGTTGGATCTCATCCAAAGGCCAAAGGCCTGATCTGACCGCATaGAGGGGGACTTTCTGTGATCCTCTGAGACTCAGTCATCTTGGC +
Preference number: 5 (lower is better)
Translates to: LSWISSKGQRPDLTA*RGTFCDPLRLSHLG
Trigger: GCCAAGATGACTGAGTCTCAGAGGATCACAGAAAGTCCCCCTCCATGCGGTCAGATCAGGCCTTTGGCCTTTGGATGAGATCCAACTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498744.5
CDS TCA 90 bp GGCACAGATGTAGAATCCTCTGCACACCAGCGACAACTGCTCCAATaGTCTGAGGTCCAAGTCACTAGACACCACCCATCGGAAGATGTA +
Preference number: 5 (lower is better)
Translates to: GTDVESSAHQRQLLQ*SEVQVTRHHPSEDV
Trigger: TACATCTTCCGATGGGTGGTGTCTAGTGACTTGGACCTCAGATCATTGGAGCAGTTGTCGCTGGTGTGCAGAGGATTCTACATCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000480463.6
ENST00000484812.1
CDS CCA 90 bp CATTGTGCAGAGGAAACTATGATGAGGCAGTCGGGGCAGGTGAGGTaGCATCTTGTAGGAAGGAGTGGTTATTTACATGAGATGGATGCC +
Preference number: 5 (lower is better)
Translates to: HCAEETMMRQSGQVR*HLVGRSGYLHEMDA
Trigger: GGCATCCATCTCATGTAAATAACCACTCCTTCCTACAAGATGCCACCTCACCTGCCCCGACTGCCTCATCATAGTTTCCTCTGCACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS-3UTR CAA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAACACAGTGGTGCAATCTaGGCTCACTGTAGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTEHSGAI*AHCSLS
Trigger: GCTGAGGCTACAGTGAGCCAAGATTGCACCACTGTG...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS GCA 90 bp GCTACAAAGTCCTCGGAGCCTCTGGCTAGAGTCCCGCGCCAGGAATaGAGGAAAACAGTGAAATTTCTCAACAGTCACAGTTGTTATAAC +
Preference number: 5 (lower is better)
Translates to: ATKSSEPLARVPRQE*RKTVKFLNSHSCYN
Trigger: GTTATAACAACTGTGACTGTTGAGAAATTTCACTGTTTTCCTGCATTCCTGGCGCGGGACTCTAGCCAGAGGCTCCGAGGACTTTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS CCA 90 bp GGCTCTACAGAGGCCTTTCTGAGAAAGCTGTGTAGCTCCTTACTCTaGCGAAGAACAAGGGGGTGTACATCTTGTCAATCTCAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: GSTEAFLRKLCSSLL*RRTRGCTSCQSQKH
Trigger: GTGCTTTTGAGATTGACAAGATGTACACCCCCTTGTTCTTCGCCAGAGTAAGGAGCTACACAGCTTTCTCAGAAAGGCCTCTGTAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000474457.1
CDS-3UTR CAA 90 bp GAGCCACCACGCCTGGTCTGTATGTGCTTTTTAAAAAGCCTATCCCATACTGAATGGGGTCTTGTTATGTaGCCCATGCTGGACTCAAAC +
Preference number: 5 (lower is better)
Translates to: EPPRLVCMCFLKSLSHTEWGLVM*PMLDSN
Trigger: GTTTGAGTCCAGCATGGGCAACATAACAAGACCCCA...TTCAGTATGGGATAGGCTTTTTAAAAAGCACATACAGACCAGGCGTGGTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS TCA 90 bp CAGCTTCTGCCTCAATCTATGCTCAATGCTTCTGATAAAATCCCTTaGGAGGACCGAGACTGGTTCAATATACTCAGTGAGCCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: QLLPQSMLNASDKIP*EDRDWFNILSEPRR
Trigger: CCTTCTCGGCTCACTGAGTATATTGAACCAGTCTCGGTCCTCTCAAGGGATTTTATCAGAAGCATTGAGCATAGATTGAGGCAGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473337.6
CDS-3UTR CAA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTCTCCTGAAATGTGAGTaGCTGCTGGAAGTAGGACAA +
Preference number: 5 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTLLKCE*LLEVGQ
Trigger: TTGTCCTACTTCCAGCAGCAACTCACATTTCAGGAG...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS TCA 90 bp CGGAGCCTCTGGCTAGAGTCCCGCGCCAGGAATGCAGGAAAACAGTaGAATTTCTCAACAGTCACAGTTGTTATAACGACTAAAGTTTTT +
Preference number: 5 (lower is better)
Translates to: RSLWLESRARNAGKQ*NFSTVTVVITTKVF
Trigger: AAAAACTTTAGTCGTTATAACAACTGTGACTGTTGAGAAATTTCACTGTTTTCCTGCATTCCTGGCGCGGGACTCTAGCCAGAGGCTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS GCA 90 bp TTCTGCCTCCTATCTTATCTCTGGCAAGCAGACTCAAAGCAGAGGTaGCTTTCAGACTTGAACCAGTTAGTATATGGTAAAATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FCLLSYLWQADSKQR*LSDLNQLVYGKMLG
Trigger: GCCCAGCATTTTACCATATACTAACTGGTTCAAGTCTGAAAGGCACCTCTGCTTTGAGTCTGCTTGCCAGAGATAAGATAGGAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459845.6
CDS-3UTR CAA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGTCTGGAGAGAGCCTCTaGCTGCTCTGCAAGGTCGAT +
Preference number: 5 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKSGESL*LLCKVD
Trigger: ATCGACCTTGCAGAGCAGCAAGAGGCTCTCTCCAGA...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGACACAGTGGTGCAATCTaGGCTCACTGTAGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGHSGAI*AHCSLS
Trigger: GCTGAGGCTACAGTGAGCCAAGATTGCACCACTGTG...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp AAGGTAACATACAGTTTTCCTAGGTGGCTGGTGCTCTCCCCCAACTTTCATACTAACACACTTCTCAGATaGCTACAAAAGGCCAACCTC +
Preference number: 5 (lower is better)
Translates to: KVTYSFPRWLVLSPNFHTNTLLR*LQKANL
Trigger: GAGGTTGGCCTTTTGTAGCAATCTGAGAAGTGTGTT...AGTATGAAAGTTGGGGGAGAGCACCAGCCACCTAGGAAAACTGTATGTTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTCTGGAGAGAGCCTCTaGCTGCTCTGCAAGGTCGAT +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRSGESL*LLCKVD
Trigger: ATCGACCTTGCAGAGCAGCAAGAGGCTCTCTCCAGA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGAGGCTCTTCAGGGGTaGTCAACATCATCACATGGC +
Preference number: 5 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSEALQG*STSSHG
Trigger: GCCATGTGATGATGTTGACAACCCCTGAAGAGCCTC...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CAA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGAGGCTCTTCAGGGGTaGTCAACATCATCACATGGC +
Preference number: 5 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSEALQG*STSSHG
Trigger: GCCATGTGATGATGTTGACAACCCCTGAAGAGCCTC...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CAA 90 bp CACACCTGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGAAGGGGGTGTACATCTaGTCAATCTCAAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: HTWPTLFLLYAHFTFNITKGVYI*SISKAL
Trigger: CAGTGCTTTTGAGATTGACAAGATGTACACCCCCTT...CGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCAGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTCAAGGGGGTGTACATCTaGTCAATCTCAAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: VQKHYAMREIKCLSSGALKGVYI*SISKAL
Trigger: CAGTGCTTTTGAGATTGACAAGATGTACACCCCCTT...GAGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CAA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGTGGGGTCTTGTTATGTaGCCCATGCTGGACTCAAAC +
Preference number: 5 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLWGLVM*PMLDSN
Trigger: GTTTGAGTCCAGCATGGGCAACATAACAAGACCCCA...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS TCA 90 bp GCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTaGGGCTCTACAGAGGCCTTTCTGAGAAAGCTGTGTAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: ALYTLIHAKVIEDWT*GSTEAFLRKLCSSL
Trigger: TAAGGAGCTACACAGCTTTCTCAGAAAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000474457.1
CDS GCA 90 bp TGTAACCCAAACCAAACAGAACAGTGGCTGAGTCAGAAGGGTTGTTaGAGAAGTGGTAAAATGGTCAGACTGGAGATAAATTTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: CNPNQTEQWLSQKGC*RSGKMVRLEINFEG
Trigger: CCCTTCAAAATTTATCTCCAGTCTGACCATTTTACCACTTCTGCAACAACCCTTCTGACTCAGCCACTGTTCTGTTTGGTTTGGGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS-3UTR CAA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCTCGGAACATCTGGAGTaGTGCCTGCAGATCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSSEHLE*CLQICF
Trigger: GAAACAGATCTGCAGGCACAACTCCAGATGTTCCGA...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAATCTGGAGAGAGCCTCTaGCTGCTCTGCAAGGTCGAT +
Preference number: 5 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQSGESL*LLCKVD
Trigger: ATCGACCTTGCAGAGCAGCAAGAGGCTCTCTCCAGA...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGCTCCTGAAATGTGAGTaGCTGCTGGAAGTAGGACAA +
Preference number: 5 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLLLKCE*LLEVGQ
Trigger: TTGTCCTACTTCCAGCAGCAACTCACATTTCAGGAG...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGACATCAGGACCTCCATaGGCAGCACTGATATGTGAA +
Preference number: 5 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWTSGPP*AALICE
Trigger: TTCACATATCAGTGCTGCCAATGGAGGTCCTGATGT...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTAGAGGCTCTTCAGGGGTaGTCAACATCATCACATGGC +
Preference number: 5 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLEALQG*STSSHG
Trigger: GCCATGTGATGATGTTGACAACCCCTGAAGAGCCTC...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGAGGCTCTTCAGGGGTaGTCAACATCATCACATGGC +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLREALQG*STSSHG
Trigger: GCCATGTGATGATGTTGACAACCCCTGAAGAGCCTC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTACTCTGATCTGCTTCTaGTACAGGGACACGACGAAA +
Preference number: 5 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTTLICF*YRDTTK
Trigger: TTTCGTCGTGTCCCTGTACAAGAAGCAGATCAGAGT...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTAAGGGGGTGTACATCTaGTCAATCTCAAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSAKGVYI*SISKAL
Trigger: CAGTGCTTTTGAGATTGACAAGATGTACACCCCCTT...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CAA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTAGATAGAGGACTGGACTaGAGGCTCTACAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLDRGLD*RLYRGL
Trigger: AAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTATC...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGGATAGAGGACTGGACTaGAGGCTCTACAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRDRGLD*RLYRGL
Trigger: AAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTATC...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGGTCAGTTGGTTGAGCTaGAAGTGTTCCAGTCCTAAG +
Preference number: 5 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWVSWLS*KCSSPK
Trigger: CTTAGGACTGGAACACTTCAAGCTCAACCAACTGAC...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCATCGAACTGGACGCTaGGGACAGTCGCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRHRTGR*GQSLQS
Trigger: ACTTTGTAGCGACTGTCCCAAGCGTCCAGTTCGATG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS GCA 90 bp AGACTCCTGAAATGTGAGTTGCTGCTGGAAGTAGGACAAGAGATCTaGCATTTTGCTGTCATCATCATTATCTTCAATGTAGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: RLLKCELLLEVGQEI*HFAVIIIIFNVAVS
Trigger: GGAAACAGCTACATTGAAGATAATGATGATGACAGCAAAATGGCAGATCTCTTGTCCTACTTCCAGCAGCAACTCACATTTCAGGAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000480463.6
ENST00000484812.1
ENST00000498744.5
CDS-3UTR CAA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTATCGGAACATCTGGAGTaGTGCCTGCAGATCTGTTTC +
Preference number: 5 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLSEHLE*CLQICF
Trigger: GAAACAGATCTGCAGGCACAACTCCAGATGTTCCGA...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTCGGAACATCTGGAGTaGTGCCTGCAGATCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRSEHLE*CLQICF
Trigger: GAAACAGATCTGCAGGCACAACTCCAGATGTTCCGA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTACATCAGGACCTCCATaGGCAGCACTGATATGTGAA +
Preference number: 5 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSTSGPP*AALICE
Trigger: TTCACATATCAGTGCTGCCAATGGAGGTCCTGATGT...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGCCTGTAATATTCCACTaGGTGCCAGGCTCTATAGAA +
Preference number: 5 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLPVIFH*VPGSIE
Trigger: TTCTATAGAGCCTGGCACCAAGTGGAATATTACAGG...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAAGTGACCCAGTAGAATaGCATCAGTCCTGGTATTCC +
Preference number: 5 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGSDPVE*HQSWYS
Trigger: GGAATACCAGGACTGATGCAATTCTACTGGGTCACT...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CAA 90 bp GGTTTCTGTAATGTCCTAATAGAGCAAAGGAAGGACACTCCTGAAGTTAAAAAGACTCTGATCTGCTTCTaGTACAGGGACACGACGAAA +
Preference number: 5 (lower is better)
Translates to: GFCNVLIEQRKDTPEVKKTLICF*YRDTTK
Trigger: TTTCGTCGTGTCCCTGTACAAGAAGCAGATCAGAGT...CTTTTTAACTTCAGGAGTGTCCTTCCTTTGCTCTATTAGGACATTACAGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCACTCTGATCTGCTTCTaGTACAGGGACACGACGAAA +
Preference number: 5 (lower is better)
Translates to: FSAKTLCHAGNKMLIQWSTLICF*YRDTTK
Trigger: TTTCGTCGTGTCCCTGTACAAGAAGCAGATCAGAGT...GCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CAA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTGATAGAGGACTGGACTaGAGGCTCTACAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLDRGLD*RLYRGL
Trigger: AAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTATC...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTTTCAATCTAGGGATGTaGCAGAACAACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSFNLGM*QNNRDS
Trigger: GGAGTCCCTGTTGTTCTGCAACATCCCTAGATTGAA...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTGATAAATACCATAGGTaGAGAGTGGTTAGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSADKYHR*RVVSRG
Trigger: CCCTCTACTAACCACTCTCAACCTATGGTATTTATC...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp ATTGGTGAAATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTTTGTGGAACCCACTTaGAGTAGCAAGGCTGTAGGG +
Preference number: 5 (lower is better)
Translates to: IGEIISNKSRTGSHTLSLFVEPT*SSKAVG
Trigger: CCCTACAGCCTTGCTACTCAAAGTGGGTTCCACAAA...AAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATTTCACCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244426.10
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCTCCTGAAATGTGAGTaGCTGCTGGAAGTAGGACAA +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRLLKCE*LLEVGQ
Trigger: TTGTCCTACTTCCAGCAGCAACTCACATTTCAGGAG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGACATCAGGACCTCCATaGGCAGCACTGATATGTGAA +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRTSGPP*AALICE
Trigger: TTCACATATCAGTGCTGCCAATGGAGGTCCTGATGT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTAAGAGACTGTTCCCCTaGACGAATATATGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSAKRLFP*TNICGF
Trigger: AAAACCACATATATTCGTCAAGGGGAACAGTCTCTT...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTAAGTGACCCAGTAGAATaGCATCAGTCCTGGTATTCC +
Preference number: 5 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLSDPVE*HQSWYS
Trigger: GGAATACCAGGACTGATGCAATTCTACTGGGTCACT...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGAGTGACCCAGTAGAATaGCATCAGTCCTGGTATTCC +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRSDPVE*HQSWYS
Trigger: GGAATACCAGGACTGATGCAATTCTACTGGGTCACT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTAAGTGACCCAGTAGAATaGCATCAGTCCTGGTATTCC +
Preference number: 5 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLSDPVE*HQSWYS
Trigger: GGAATACCAGGACTGATGCAATTCTACTGGGTCACT...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000484436.7
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGACTCTGATCTGCTTCTaGTACAGGGACACGACGAAA +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRTLICF*YRDTTK
Trigger: TTTCGTCGTGTCCCTGTACAAGAAGCAGATCAGAGT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp CACTTTGAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTAGTCAGTTGGTTGAGCTaGAAGTGTTCCAGTCCTAAG +
Preference number: 5 (lower is better)
Translates to: HFEPLVQKHYAMREIKCLVSWLS*KCSSPK
Trigger: CTTAGGACTGGAACACTTCAAGCTCAACCAACTGAC...TAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTCAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTAACACACTTCTCAGATaGCTACAAAAGGCCAACCTC +
Preference number: 5 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSNTLLR*LQKANL
Trigger: GAGGTTGGCCTTTTGTAGCAATCTGAGAAGTGTGTT...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp ACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGAAATTATTCAATCTAGGGATGTaGCAGAACAACAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: TKPNLNQVEVYQTQTLKLFNLGM*QNNRDS
Trigger: GGAGTCCCTGTTGTTCTGCAACATCCCTAGATTGAA...TAATTTCAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GAAACAACAAAACCAAATCTGAATCAGGTAGAGGTCTACCAGACACAAACTCTGGATAAATACCATAGGTaGAGAGTGGTTAGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: ETTKPNLNQVEVYQTQTLDKYHR*RVVSRG
Trigger: CCCTCTACTAACCACTCTCAACCTATGGTATTTATC...CAGAGTTTGTGTCTGGTAGACCTCTACCTGATTCAGATTTGGTTTTGTTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GAGCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGTCGATTTTCTAAATaGCTAGAGCTTACACCTGGA +
Preference number: 5 (lower is better)
Translates to: EPLVQKHYAMREIKCLSSGRFSK*LELTPG
Trigger: TCCAGGTGTAAGCTCTAGCAATTTAGAAAATCGACC...ACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp GCCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGTGTTCTTGTTTTCCTTaGGTATCTGCCGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: AFSAKTLCHAGNKMLIQWCSCFP*VSADVF
Trigger: GAAAACATCGGCAGATACCAAAGGAAAACAAGAACA...CCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp AGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAGCGCTTATATCAGGTACAAGTaGCATAGCCCTACGATAAAA +
Preference number: 5 (lower is better)
Translates to: SAKTLCHAGNKMLIQWSAYIRYK*HSPTIK
Trigger: TTTTATCGTAGGGCTATGCAACTTGTACCTGATATA...AGCGCTCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCCTGTAATATTCCACTaGGTGCCAGGCTCTATAGAA +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRPVIFH*VPGSIE
Trigger: TTCTATAGAGCCTGGCACCAAGTGGAATATTACAGG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGAAGGGGGTGTACATCTaGTCAATCTCAAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRKGVYI*SISKAL
Trigger: CAGTGCTTTTGAGATTGACAAGATGTACACCCCCTT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp TGGCCAACTCTCTTCCTTCTGTATGCACATTTCACCTTTAACATAACGTGTACTTTTCTACGGCAGGATTaGCAAAGACCAGAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: WPTLFLLYAHFTFNITCTFLRQD*QRPEEK
Trigger: TTTTTCTTCTGGTCTTTGCAAATCCTGCCGTAGAAA...AGTACACGTTATGTTAAAGGTGAAATGTGCATACAGAAGGAAGAGAGTTGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGCTATCCCATACTGAATaGTGGGAACCTATGAAGTGT +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRLSHTE*WEPMKC
Trigger: ACACTTCATAGGTTCCCACAATTCAGTATGGGATAG...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS GCA 90 bp GAAAACCCAAATAATGTCAGGCATATAAACACACCAGTTGCCCTCTaGAATCTACATTTCTCATTCAGCCACTTTCTATTTAGTACCATA +
Preference number: 5 (lower is better)
Translates to: ENPNNVRHINTPVAL*NLHFSFSHFLFSTI
Trigger: TATGGTACTAAATAGAAAGTGGCTGAATGAGAAATGTAGATTGCAGAGGGCAACTGGTGTGTTTATATGCCTGACATTATTTGGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244426.10
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTGTTCTTGTTTTCCTTaGGTATCTGCCGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRCSCFP*VSADVF
Trigger: GAAAACATCGGCAGATACCAAAGGAAAACAAGAACA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp CCTTTAGTGCAAAAACATTATGCCATGCGGGAAATAAAATGCTTATCCAGTGGAATAGAGAGCTCCATTTaGTTCTTCTTCTACTGCTTT +
Preference number: 5 (lower is better)
Translates to: PLVQKHYAMREIKCLSSGIESSI*FFFYCF
Trigger: AAAGCAGTAGAAGAAGAACAAAATGGAGCTCTCTAT...TCCACTGGATAAGCATTTTATTTCCCGCATGGCATAATGTTTTTGCACTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGAAGAGACTGTTCCCCTaGACGAATATATGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRKRLFP*TNICGF
Trigger: AAAACCACATATATTCGTCAAGGGGAACAGTCTCTT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS CCA 90 bp GTCAATCAAAAGCAACAAAGAACAGATGTCCATTTAACTAATACATaGAGAGAGAGAATTTTCCACTCACTCAGTGTACTACAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: VNQKQQRTDVHLTNT*RERIFHSLSVLQLY
Trigger: GTACAACTGTAGTACACTGAGTGAGTGGAAAATTCTCTCTCTCCATGTATTAGTTAAATGGACATCTGTTCTTTGTTGCTTTTGATTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474457.1
ENST00000480463.6
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGATAGAGAGCTCCATTTaGTTCTTCTTCTACTGCTTT +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRIESSI*FFFYCF
Trigger: AAAGCAGTAGAAGAAGAACAAAATGGAGCTCTCTAT...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp TTTTGCGCTATATACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTGAGGTATATCAGGTACAAGTaGCATAGCCCTACGATAAAA +
Preference number: 5 (lower is better)
Translates to: FCAIYFNSCKSDRGLDLRYIRYK*HSPTIK
Trigger: TTTTATCGTAGGGCTATGCAACTTGTACCTGATATA...CCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTATATAGCGCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
CDS-3UTR CAA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAAAAGAGACTGTTCCCCTaGACGAATATATGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQKRLFP*TNICGF
Trigger: AAAACCACATATATTCGTCAAGGGGAACAGTCTCTT...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS-3UTR CAA 90 bp AATAATTTCAAACAAATCCAGAACAGGTTCTCACACTTTGAGCCTTTAGTGCAAATAGAGAGCTCCATTTaGTTCTTCTTCTACTGCTTT +
Preference number: 5 (lower is better)
Translates to: NNFKQIQNRFSHFEPLVQIESSI*FFFYCF
Trigger: AAAGCAGTAGAAGAAGAACAAAATGGAGCTCTCTAT...TTGCACTAAAGGCTCAAAGTGTGAGAACCTGTTCTGGATTTGTTTGAAATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244426.10
ENST00000323557.12
CDS GCA 72 bp CAGCCCTACTGGAGACCCCGGACGCCGCCGCGGAGCTaGCCCCTCAGCTGCGGAAACCTGCGCCGACGCGCC +
Preference number: 6 (lower is better)
Translates to: QPYWRPRTPPRS*PLSCGNLRRRA
Trigger: GGCGCGTCGGCGCAGGTTTCCGCAGCTGAGGGGGCAGCTCCGCGGCGGCGTCCGGGGTCTCCAGTAGGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323557.12
CDS GCA 72 bp GGAGGGACGCCCGTTGCCAGCCGAGGCGGGGGATTGTaGGAGCACCGGAGCGTCAGCCCTACTGGAGACCCC +
Preference number: 6 (lower is better)
Translates to: GGTPVASRGGGL*EHRSVSPTGDP
Trigger: GGGGTCTCCAGTAGGGCTGACGCTCCGGTGCTCGCACAATCCCCCGCCTCGGCTGGCAACGGGCGTCCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323557.12
ENST00000461222.1
CDS GCA 72 bp CTCGGTCGGAGAAGCGCACCAGGCAGCGGCAATAACTaGGGGCCCGGCGTACGGCAGCCATCTTCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: LGRRSAPGSGNN*GPGVRQPSSRG
Trigger: GCCCCGCGAAGATGGCTGCCGTACGCCGGGCCCGCAGTTATTGCCGCTGCCTGGTGCGCTTCTCCGACCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323557.12
ENST00000461222.1
CDS CAA 72 bp AGTGGAGGGACGCCCGTTGCCAGCCGAGGCGGGGGATaGTGCGAGCACCGGAGCGTCAGCCCTACTGGAGAC +
Preference number: 6 (lower is better)
Translates to: SGGTPVASRGGG*CEHRSVSPTGD
Trigger: GTCTCCAGTAGGGCTGACGCTCCGGTGCTCGCACAATCCCCCGCCTCGGCTGGCAACGGGCGTCCCTCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323557.12
ENST00000461222.1
CDS GCA 72 bp CGGAGGAGGGGTGCTGGGTGTCCGGGTGTCTACTCCTaGCTGTCTCTGCAGCGGAGCTTAGCAGAGTTCTCG +
Preference number: 6 (lower is better)
Translates to: RRRGAGCPGVYS*LSLQRSLAEFS
Trigger: CGAGAACTCTGCTAAGCTCCGCTGCAGAGACAGGCAGGAGTAGACACCCGGACACCCAGCACCCCTCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323557.12
ENST00000461222.1
CDS TCA 72 bp CAACCAGAGCATGTGCAAGGCCCTCAGGCAGAAGTGTaGCTGGTGGGCTCATCCAAGAGCCAGCAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: QPEHVQGPQAEV*LVGSSKSQQEH
Trigger: GTGCTCCTGCTGGCTCTTGGATGAGCCCACCAGTCACACTTCTGCCTGAGGGCCTTGCACATGCTCTGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CCA 72 bp CGCTTGGGACAGTCGCTACAAAGTCCTCGGAGCCTCTaGCTAGAGTCCCGCGCCAGGAATGCAGGAAAACAG +
Preference number: 6 (lower is better)
Translates to: RLGQSLQSPRSL*LESRARNAGKQ
Trigger: CTGTTTTCCTGCATTCCTGGCGCGGGACTCTAGCCAGAGGCTCCGAGGACTTTGTAGCGACTGTCCCAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS CCA 72 bp AAGCAAGCCGCCCTGAGAAGCATCGAACTGGACGCTTaGGACAGTCGCTACAAAGTCCTCGGAGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: KQAALRSIELDA*DSRYKVLGASG
Trigger: GCCAGAGGCTCCGAGGACTTTGTAGCGACTGTCCCAAGCGTCCAGTTCGATGCTTCTCAGGGCGGCTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS CCA 72 bp CAGAGCATGTGCAAGGCCCTCAGGCAGAAGTGTGACTaGTGGGCTCATCCAAGAGCCAGCAGGAGCACACAG +
Preference number: 6 (lower is better)
Translates to: QSMCKALRQKCD*WAHPRASRSTQ
Trigger: CTGTGTGCTCCTGCTGGCTCTTGGATGAGCCCACCAGTCACACTTCTGCCTGAGGGCCTTGCACATGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CAA 90 bp TGGGCCCTTAAAGCAAGCCGCCCTGAGAAGCATCGAACTGGACGCTaGGGACAGTCGCTACAAAGTCCTCGGAGCCTCTGGCTAGAGTCC +
Preference number: 6 (lower is better)
Translates to: WALKASRPEKHRTGR*GQSLQSPRSLWLES
Trigger: GGACTCTAGCCAGAGGCTCCGAGGACTTTGTAGCGACTGTCCCAAGCGTCCAGTTCGATGCTTCTCAGGGCGGCTTGCTTTAAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS CAA 72 bp AAAGCAAGCCGCCCTGAGAAGCATCGAACTGGACGCTaGGGACAGTCGCTACAAAGTCCTCGGAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: KASRPEKHRTGR*GQSLQSPRSLW
Trigger: CCAGAGGCTCCGAGGACTTTGTAGCGACTGTCCCAAGCGTCCAGTTCGATGCTTCTCAGGGCGGCTTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS GCA 72 bp CAGCAGGAGCACACAGCTGTGGCAAAGTGGGCATTGTaGAGAGGAAACTATGATGAGGCAGTCGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: QQEHTAVAKWAL*RGNYDEAVGAG
Trigger: ACCTGCCCCGACTGCCTCATCATAGTTTCCTCTGCACAATGCCCACTTTGCCACAGCTGTGTGCTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CAA 72 bp AGCCAGCAGGAGCACACAGCTGTGGCAAAGTGGGCATaGTGCAGAGGAAACTATGATGAGGCAGTCGGGGCA +
Preference number: 6 (lower is better)
Translates to: SQQEHTAVAKWA*CRGNYDEAVGA
Trigger: TGCCCCGACTGCCTCATCATAGTTTCCTCTGCACAATGCCCACTTTGCCACAGCTGTGTGCTCCTGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS TCA 72 bp CCCTTGAGAGGACCGAGACTGGTTCAATATACTCAGTaGGCCGAGAAGGGACATTTTCCCCGGCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: PLRGPRLVQYTQ*AEKGHFPRLSC
Trigger: GCAGGACAGCCGGGGAAAATGTCCCTTCTCGGCTCACTGAGTATATTGAACCAGTCTCGGTCCTCTCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473337.6
CDS GCA 72 bp ATGGGGATAAGTATCTCAGGCAGCAACCAGAGCATGTaGAAGGCCCTCAGGCAGAAGTGTGACTGGTGGGCT +
Preference number: 6 (lower is better)
Translates to: MGISISGSNQSM*KALRQKCDWWA
Trigger: AGCCCACCAGTCACACTTCTGCCTGAGGGCCTTGCACATGCTCTGGTTGCTGCCTGAGATACTTATCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CCA 72 bp TCCAAGAGCCAGCAGGAGCACACAGCTGTGGCAAAGTaGGCATTGTGCAGAGGAAACTATGATGAGGCAGTC +
Preference number: 6 (lower is better)
Translates to: SKSQQEHTAVAK*ALCRGNYDEAV
Trigger: GACTGCCTCATCATAGTTTCCTCTGCACAATGCCCACTTTGCCACAGCTGTGTGCTCCTGCTGGCTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CCA 72 bp TGGGCTCATCCAAGAGCCAGCAGGAGCACACAGCTGTaGCAAAGTGGGCATTGTGCAGAGGAAACTATGATG +
Preference number: 6 (lower is better)
Translates to: WAHPRASRSTQL*QSGHCAEETMM
Trigger: CATCATAGTTTCCTCTGCACAATGCCCACTTTGCCACAGCTGTGTGCTCCTGCTGGCTCTTGGATGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS TCA 72 bp GTAGAATCCTCTGCACACCAGCGACAACTGCTCCAATaGTCTGAGGTCCAAGTCACTAGACACCACCCATCG +
Preference number: 6 (lower is better)
Translates to: VESSAHQRQLLQ*SEVQVTRHHPS
Trigger: CGATGGGTGGTGTCTAGTGACTTGGACCTCAGATCATTGGAGCAGTTGTCGCTGGTGTGCAGAGGATTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000480463.6
ENST00000484812.1
CDS CCA 72 bp ATCTCATCCAAAGGCCAAAGGCCTGATCTGACCGCATaGAGGGGGACTTTCTGTGATCCTCTGAGACTCAGT +
Preference number: 6 (lower is better)
Translates to: ISSKGQRPDLTA*RGTFCDPLRLS
Trigger: ACTGAGTCTCAGAGGATCACAGAAAGTCCCCCTCCATGCGGTCAGATCAGGCCTTTGGCCTTTGGATGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498744.5
CDS CCA 72 bp GAGGAAACTATGATGAGGCAGTCGGGGCAGGTGAGGTaGCATCTTGTAGGAAGGAGTGGTTATTTACATGAG +
Preference number: 6 (lower is better)
Translates to: EETMMRQSGQVR*HLVGRSGYLHE
Trigger: CTCATGTAAATAACCACTCCTTCCTACAAGATGCCACCTCACCTGCCCCGACTGCCTCATCATAGTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CCA 72 bp GAGGCCTTTCTGAGAAAGCTGTGTAGCTCCTTACTCTaGCGAAGAACAAGGGGGTGTACATCTTGTCAATCT +
Preference number: 6 (lower is better)
Translates to: EAFLRKLCSSLL*RRTRGCTSCQS
Trigger: AGATTGACAAGATGTACACCCCCTTGTTCTTCGCCAGAGTAAGGAGCTACACAGCTTTCTCAGAAAGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000474457.1
CDS CAA 72 bp CTCCTTACTCTGGCGAAGAACAAGGGGGTGTACATCTaGTCAATCTCAAAAGCACTGACTGCAGTCTCACCA +
Preference number: 6 (lower is better)
Translates to: LLTLAKNKGVYI*SISKALTAVSP
Trigger: TGGTGAGACTGCAGTCAGTGCTTTTGAGATTGACAAGATGTACACCCCCTTGTTCTTCGCCAGAGTAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000473318.1
ENST00000474457.1
CDS CAA 90 bp AAGCTCAGGCTGACACAGTTTAAGCACAGACTCCTGAAATGTGAGTaGCTGCTGGAAGTAGGACAAGAGATCTGCCATTTTGCTGTCATC +
Preference number: 6 (lower is better)
Translates to: KLRLTQFKHRLLKCE*LLEVGQEICHFAVI
Trigger: GATGACAGCAAAATGGCAGATCTCTTGTCCTACTTCCAGCAGCAACTCACATTTCAGGAGTCTGTGCTTAAACTGTGTCAGCCTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000480463.6
ENST00000484812.1
ENST00000498744.5
CDS CAA 72 bp GGCAAAGGCCCTGCTCTTTTACTGTGGGAAAGCAAATaGAGAGGAAAGCTTCTGGTAGTACGCTTAGTGCAA +
Preference number: 6 (lower is better)
Translates to: GKGPALLLWESK*RGKLLVVRLVQ
Trigger: TTGCACTAAGCGTACTACCAGAAGCTTTCCTCTCAATTTGCTTTCCCACAGTAAAAGAGCAGGGCCTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS TCA 72 bp TGGCTAGAGTCCCGCGCCAGGAATGCAGGAAAACAGTaGAATTTCTCAACAGTCACAGTTGTTATAACGACT +
Preference number: 6 (lower is better)
Translates to: WLESRARNAGKQ*NFSTVTVVITT
Trigger: AGTCGTTATAACAACTGTGACTGTTGAGAAATTTCACTGTTTTCCTGCATTCCTGGCGCGGGACTCTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370939.7
CDS TCA 72 bp TGCCACTATGTAACCCAAACCAAACAGAACAGTGGCTaGGTCAGAAGGGTTGTTGCAGAAGTGGTAAAATGG +
Preference number: 6 (lower is better)
Translates to: CHYVTQTKQNSG*VRRVVAEVVKW
Trigger: CCATTTTACCACTTCTGCAACAACCCTTCTGACTCAGCCACTGTTCTGTTTGGTTTGGGTTACATAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CCA 72 bp AGGATGCCACTATGTAACCCAAACCAAACAGAACAGTaGCTGAGTCAGAAGGGTTGTTGCAGAAGTGGTAAA +
Preference number: 6 (lower is better)
Translates to: RMPLCNPNQTEQ*LSQKGCCRSGK
Trigger: TTTACCACTTCTGCAACAACCCTTCTGACTCAGCCACTGTTCTGTTTGGTTTGGGTTACATAGTGGCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CAA 72 bp GAGCCTCTTGCTGCTCTGCAAGGTCGATTTTCTAAATaGCTAGAGCTTACACCTGGAGCAAGTTCAAACATC +
Preference number: 6 (lower is better)
Translates to: EPLAALQGRFSK*LELTPGASSNI
Trigger: GATGTTTGAACTTGCTCCAGGTGTAAGCTCTAGCAATTTAGAAAATCGACCTTGCAGAGCAGCAAGAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000459845.6
ENST00000468481.1
ENST00000473337.6
ENST00000498744.5
CDS CAA 72 bp TTAAACGTGGAACAATGGACTGAGGCTCTTCAGGGGTaGTCAACATCATCACATGGCCATCAGGAAAGAATC +
Preference number: 6 (lower is better)
Translates to: LNVEQWTEALQG*STSSHGHQERI
Trigger: GATTCTTTCCTGATGGCCATGTGATGATGTTGACAACCCCTGAAGAGCCTCAGTCCATTGTTCCACGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000474457.1
ENST00000484436.7
CDS CAA 90 bp CACTTGGTGCCAGGCTCTATAGAAACCATCAAGAGACTGTTCCCCTaGACGAATATATGTGGTTTTACTGATATACACGCCATCAAACCG +
Preference number: 6 (lower is better)
Translates to: HLVPGSIETIKRLFP*TNICGFTDIHAIKP
Trigger: CGGTTTGATGGCGTGTATATCAGTAAAACCACATATATTCGTCAAGGGGAACAGTCTCTTGATGGTTTCTATAGAGCCTGGCACCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000474457.1
ENST00000480463.6
CDS CAA 90 bp AATGGACAAGGCAAAGGCCCTGCTCTTTTACTGTGGGAAAGCAAATaGAGAGGAAAGCTTCTGGTAGTACGCTTAGTGCAAAAATCAACC +
Preference number: 6 (lower is better)
Translates to: NGQGKGPALLLWESK*RGKLLVVRLVQKST
Trigger: GGTTGATTTTTGCACTAAGCGTACTACCAGAAGCTTTCCTCTCAATTTGCTTTCCCACAGTAAAAGAGCAGGGCCTTTGCCTTGTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CAA 90 bp TTTCCACTCACTCAGTGTACTACAGTTGTACCTGTAATATTCCACTaGGTGCCAGGCTCTATAGAAACCATCAAGAGACTGTTCCCCTTG +
Preference number: 6 (lower is better)
Translates to: FPLTQCTTVVPVIFH*VPGSIETIKRLFPL
Trigger: CAAGGGGAACAGTCTCTTGATGGTTTCTATAGAGCCTGGCACCAAGTGGAATATTACAGGTACAACTGTAGTACACTGAGTGAGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474457.1
ENST00000480463.6
CDS CCA 72 bp ACTAATGGACAAGGCAAAGGCCCTGCTCTTTTACTGTaGGAAAGCAAATTGAGAGGAAAGCTTCTGGTAGTA +
Preference number: 6 (lower is better)
Translates to: TNGQGKGPALLL*ESKLRGKLLVV
Trigger: TACTACCAGAAGCTTTCCTCTCAATTTGCTTTCCCACAGTAAAAGAGCAGGGCCTTTGCCTTGTCCATTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CAA 72 bp CTGACACAGTTTAAGCACAGACTCCTGAAATGTGAGTaGCTGCTGGAAGTAGGACAAGAGATCTGCCATTTT +
Preference number: 6 (lower is better)
Translates to: LTQFKHRLLKCE*LLEVGQEICHF
Trigger: AAAATGGCAGATCTCTTGTCCTACTTCCAGCAGCAACTCACATTTCAGGAGTCTGTGCTTAAACTGTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000480463.6
ENST00000484812.1
ENST00000498744.5
CDS TCA 72 bp GAACCCACTTTGAGTAGCAAGGCTGTAGGGGGCACTTaGGACCTTACTATTAATTTCCAAAGGAAAATGAGT +
Preference number: 6 (lower is better)
Translates to: EPTLSSKAVGGT*DLTINFQRKMS
Trigger: ACTCATTTTCCTTTGGAAATTAATAGTAAGGTCTCAAGTGCCCCCTACAGCCTTGCTACTCAAAGTGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244426.10
CDS TCA 72 bp ACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTTaGGGCTCTACAGAGGCCTTTCTGAGAAAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: TLIHAKVIEDWT*GSTEAFLRKLC
Trigger: ACACAGCTTTCTCAGAAAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000474457.1
CDS TCA 72 bp GAGGTGGCATCTTGTAGGAAGGAGTGGTTATTTACATaGGATGGATGCCACTGGAGGGTTTTGAACATAATT +
Preference number: 6 (lower is better)
Translates to: EVASCRKEWLFT*DGCHWRVLNII
Trigger: AATTATGTTCAAAACCCTCCAGTGGCATCCATCTCATGTAAATAACCACTCCTTCCTACAAGATGCCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS TCA 72 bp CCTCAATCTATGCTCAATGCTTCTGATAAAATCCCTTaGGAGGACCGAGACTGGTTCAATATACTCAGTGAG +
Preference number: 6 (lower is better)
Translates to: PQSMLNASDKIP*EDRDWFNILSE
Trigger: CTCACTGAGTATATTGAACCAGTCTCGGTCCTCTCAAGGGATTTTATCAGAAGCATTGAGCATAGATTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473337.6
CDS GCA 72 bp AACCAAACAGAACAGTGGCTGAGTCAGAAGGGTTGTTaGAGAAGTGGTAAAATGGTCAGACTGGAGATAAAT +
Preference number: 6 (lower is better)
Translates to: NQTEQWLSQKGC*RSGKMVRLEIN
Trigger: ATTTATCTCCAGTCTGACCATTTTACCACTTCTGCAACAACCCTTCTGACTCAGCCACTGTTCTGTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474457.1
CDS CAA 72 bp CCAGGCTCTATAGAAACCATCAAGAGACTGTTCCCCTaGACGAATATATGTGGTTTTACTGATATACACGCC +
Preference number: 6 (lower is better)
Translates to: PGSIETIKRLFP*TNICGFTDIHA
Trigger: GGCGTGTATATCAGTAAAACCACATATATTCGTCAAGGGGAACAGTCTCTTGATGGTTTCTATAGAGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000474457.1
ENST00000480463.6
CDS CAA 72 bp TACTTTAATTCATGCAAAAGTGATAGAGGACTGGACTaGAGGCTCTACAGAGGCCTTTCTGAGAAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: YFNSCKSDRGLD*RLYRGLSEKAV
Trigger: CACAGCTTTCTCAGAAAGGCCTCTGTAGAGCCTCAAGTCCAGTCCTCTATCACTTTTGCATGAATTAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244426.10
ENST00000323557.12
ENST00000370939.7
ENST00000474457.1
CDS GCA 72 bp CTATCTTATCTCTGGCAAGCAGACTCAAAGCAGAGGTaGCTTTCAGACTTGAACCAGTTAGTATATGGTAAA +
Preference number: 6 (lower is better)
Translates to: LSYLWQADSKQR*LSDLNQLVYGK
Trigger: TTTACCATATACTAACTGGTTCAAGTCTGAAAGGCACCTCTGCTTTGAGTCTGCTTGCCAGAGATAAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459845.6
CDS TCA 72 bp GAAATATTAGGATACTCAAGCAGAAGACGACTTATGTaGCAGAAATCTGCTCATAAATTCTGGCGAAGAACA +
Preference number: 6 (lower is better)
Translates to: EILGYSSRRRLM*QKSAHKFWRRT
Trigger: TGTTCTTCGCCAGAATTTATGAGCAGATTTCTGTCACATAAGTCGTCTTCTGCTTGAGTATCCTAATATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484436.7
CDS CCA 72 bp ATTTTAAAAGATCACTCTGGTGGTTTATGGAGAATATaGTCTAGTGGTATAAGAGTGGAAACAGGAAGACCA +
Preference number: 6 (lower is better)
Translates to: ILKDHSGGLWRI*SSGIRVETGRP
Trigger: TGGTCTTCCTGTTTCCACTCTTATACCACTAGACCATATTCTCCATAAACCACCAGAGTGATCTTTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474457.1