RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO7 (Homo sapiens)

Ensembl gene IDs: ENSG00000100225

Ensembl transcript IDs: ENST00000266087.12, ENST00000397426.5, ENST00000420700.5, ENST00000425028.5, ENST00000444207.1, ENST00000452138.3, ENST00000465418.1, ENST00000492535.1

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTGGGGCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTaGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGAAACTGGCT +
Preference number: 1 (lower is better)
Translates to: IGAASPWQDGVRSWK*ANWIKAWSQWRKLA
Trigger: AGCCAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 90 bp TCTGTCATTGGGGCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTaGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: SVIGAASPWQDGVRS*KWANWIKAWSQWRK
Trigger: TTTCCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCCAATGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR GCA 90 bp CAGGTGAGAGTAGCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTaGAGCTTATACACCCCGCTCAACTTCCACTTCTCCGGCATGGAC +
Preference number: 1 (lower is better)
Translates to: QVRVAELPSQRGCMY*SLYTPLNFHFSGMD
Trigger: GTCCATGCCGGAGAAGTGGAAGTTGAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCTACTCTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 90 bp CCTGCTGGGTCTAAAGGGAAATCTGTCATTGGGGCCGCCTCGCCCTaGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAA +
Preference number: 1 (lower is better)
Translates to: PAGSKGKSVIGAASP*QDGVRSWKWANWIK
Trigger: TTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTAGACCCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR GCA 90 bp AAAGGCACACAGGTGAGAGTAGCGGAGCTGCCCTCGCAGAGAGGATaGATGTACTGCAGCTTATACACCCCGCTCAACTTCCACTTCTCC +
Preference number: 1 (lower is better)
Translates to: KGTQVRVAELPSQRG*MYCSLYTPLNFHFS
Trigger: GGAGAAGTGGAAGTTGAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCTACTCTCACCTGTGTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 90 bp TGGCCTAGGGTGCAAGGGGTTGGGATAGAATGGAATGGTGTGAGTTaGCGATGGCAGGAGCATCACAAACCGCCCTTTCGGGGATTCTTT +
Preference number: 1 (lower is better)
Translates to: WPRVQGVGIEWNGVS*RWQEHHKPPFRGFF
Trigger: AAAGAATCCCCGAAAGGGCGGTTTGTGATGCTCCTGCCATCGTCAACTCACACCATTCCATTCTATCCCAACCCCTTGCACCCTAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 90 bp ATATTCACCCCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATaGCCTAGGGTGCAAGGGGTTGGGATAGAATGGAATGGTGTGAGT +
Preference number: 1 (lower is better)
Translates to: IFTPDNSWRKAGARK*PRVQGVGIEWNGVS
Trigger: ACTCACACCATTCCATTCTATCCCAACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTGAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 90 bp ATAGGGAAGTGTTGGTCTTTGGTCATATTCACCCCCGATAATTCCTaGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGGTGCAAGGGGTT +
Preference number: 1 (lower is better)
Translates to: IGKCWSLVIFTPDNS*RKAGARKWPRVQGV
Trigger: AACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTGAATATGACCAAAGACCAACACTTCCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 90 bp ATGTGGCACTTGCCCTTCCACCGATTCACTACAGAGCATGGGTTCTaGGGGATAGAAACCTGTGCCCTCTGCCATATGCGCATTATCTTG +
Preference number: 1 (lower is better)
Translates to: MWHLPFHRFTTEHGF*GIETCALCHMRIIL
Trigger: CAAGATAATGCGCATATGGCAGAGGGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGTAGTGAATCGGTGGAAGGGCAAGTGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 90 bp ACTGTCGTCATTCCAAACACCAGACTGGGCTGCCTGTCCTTGGAATaGATCACTTGGTTGTTCATCCTGCATGCTAGTCTGATTGGAGCT +
Preference number: 1 (lower is better)
Translates to: TVVIPNTRLGCLSLE*ITWLFILHASLIGA
Trigger: AGCTCCAATCAGACTAGCATGCAGGATGAACAACCAAGTGATTCATTCCAAGGACAGGCAGCCCAGTCTGGTGTTTGGAATGACGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
3UTR CCA 90 bp CAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAGGCCAACCTTGTCACAGAGGAACCT +
Preference number: 1 (lower is better)
Translates to: QKTNFNLEENQEQGD*QPTIPKANLVTEEP
Trigger: AGGTTCCTCTGTGACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR TCA 90 bp GTGCTTTGGCTTCGGTGCCCTGAGGTATGTAACCTGACTCCAACATaGGAAGATGTATCAACACTATCAAGGCATCATTGGCATCAGAAC +
Preference number: 1 (lower is better)
Translates to: VLWLRCPEVCNLTPT*EDVSTLSRHHWHQN
Trigger: GTTCTGATGCCAATGATGCCTTGATAGTGTTGATACATCTTCTCATGTTGGAGTCAGGTTACATACCTCAGGGCACCGAAGCCAAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 90 bp AGAAGAGGATACACCAGCTGGTCTTTAAAGAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTGGCTACATTTTCCCCTAGTTTCTCT +
Preference number: 1 (lower is better)
Translates to: RRGYTSWSLKRRESF*RSLYMLATFSPSFS
Trigger: AGAGAAACTAGGGGAAAATGTAGCCAACATATACAAAGATCTTCAGAAACTCTCTCGCCTCTTTAAAGACCAGCTGGTGTATCCTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp GCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCCAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAG +
Preference number: 2 (lower is better)
Translates to: AASPWQDGVRSWKWANWIQEQGD*QPTIPK
Trigger: CTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTG...GATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp GCCATCAGTTGGCCGACCCCTGCTGGGTCTAAAGGGAAATCTGTCATTGGGGCCGCATGGACAGTGCTTTaGCTTCGGTGCCCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: AISWPTPAGSKGKSVIGAAWTVL*LRCPEV
Trigger: TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGC...GGCCCCAATGACAGATTTCCCTTTAGACCCAGCAGGGGTCGGCCAACTGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp GCCATCAGTTGGCCGACCCCTGCTGGGTCTAAAGGGAAATCTGTCATTGGGGCCTCCACTTCTCCGGCATaGACAGTGCTTTGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: AISWPTPAGSKGKSVIGASTSPA*TVLWLR
Trigger: CCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGA...GGCCCCAATGACAGATTTCCCTTTAGACCCAGCAGGGGTCGGCCAACTGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp AGCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTTCACAGAGGAACCTTTaGGTCATACCACCCCTAGGG +
Preference number: 2 (lower is better)
Translates to: SGAALAERMHVLQLIHPASQRNL*VIPPLG
Trigger: CCCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGA...AGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp GGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGTGGGCTGCCTGTCCTTaGAATGAATCACTTGGTTGT +
Preference number: 2 (lower is better)
Translates to: GVRSWKWANWIKAWSQWRWAACP*NESLGC
Trigger: ACAACCAAGTGATTCATTCCAAGGACAGGCAGCCCA...CCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425028.5
3UTR-3UTR CCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCCTCAGTGGAGGAAACTaGCTGGGCGTCTCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPLSGGN*LGVSPG
Trigger: TCCTGGGGAGACGCCCAGCCAGTTTCCTCCACTGAG...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp GATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGCTGAGGTATGTAACCTaGCTCCAACATGAGAAGATG +
Preference number: 2 (lower is better)
Translates to: DGVRSWKWANWIKAWSQWLRYVT*LQHEKM
Trigger: CATCTTCTCATGTTGGAGTCAGGTTACATACCTCAG...CCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAATCACAGAGGAACCTTTaGGTCATACCACCCCTAGGG +
Preference number: 2 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQSQRNL*VIPPLG
Trigger: CCCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGA...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp CCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTATGTAACCTGACTCCACTCTTAAAAGGTTTCTaGGAGTGCAACTCTCAACAC +
Preference number: 2 (lower is better)
Translates to: PAWTVLWLRCPEVCNLTPLLKGF*ECNSQH
Trigger: GTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAG...TGGAGTCAGGTTACATACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp AAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAACAGAGCATGGGTTCTaGGGGATAGAAACCTGTGCC +
Preference number: 2 (lower is better)
Translates to: KPQTKTRRNEHPEVGRSVTEHGF*GIETCA
Trigger: GGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGT...TACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp AGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATACATCACAGAGGAACCTTTaGGTCATACCACCCCTAGGG +
Preference number: 2 (lower is better)
Translates to: SRKIRSFSSNGRTTNPNTSQRNL*VIPPLG
Trigger: CCCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGA...TGTATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp ATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGGTGCAAGGGGTTGATTCACTACAGAGCATaGGTTCTGAGGGATAGAAAC +
Preference number: 2 (lower is better)
Translates to: IIPGGRRELGNGLGCKGLIHYRA*VLRDRN
Trigger: GTTTCTATCCCTCAGAACCCATGCTCTGTAGTGAAT...CAACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp CAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGAACCTGACTCCAACATaGGAAGATGTATCAACACTA +
Preference number: 2 (lower is better)
Translates to: QDGVRSWKWANWIKAWSQNLTPT*EDVSTL
Trigger: TAGTGTTGATACATCTTCTCATGTTGGAGTCAGGTT...CTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp CCAGAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAACTGAGGTATGTAACCTaGCTCCAACATGAGAAGATG +
Preference number: 2 (lower is better)
Translates to: PEVGRSVVSVPMGGRPTQLRYVT*LQHEKM
Trigger: CATCTTCTCATGTTGGAGTCAGGTTACATACCTCAG...TTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp AATCACATGAATGACAGCCGGCCATCAGTTGGCCGACCCCTGCTGGGTCTAAAGAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTG +
Preference number: 2 (lower is better)
Translates to: NHMNDSRPSVGRPLLGLKRRESF*RSLYML
Trigger: CAACATATACAAAGATCTTCAGAAACTCTCTCGCCT...CTTTAGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGTCATTCATGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp TCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGAAACTGGCTCTGTGTCTTGAACTCTaGCAGTATTGTCTCGAAAAT +
Preference number: 2 (lower is better)
Translates to: SWKWANWIKAWSQWRKLALCLEL*QYCLEN
Trigger: ATTTTCGAGACAATACTGTCAGAGTTCAAGACACAG...AGCCAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp GTCTCCAACATAGGGAAGTGTTGGTCTTTGGTCATATTCACCCCCGATAATTCCTGGAATGGTGTGAGTTaGCGATGGCAGGAGCATCAC +
Preference number: 2 (lower is better)
Translates to: VSNIGKCWSLVIFTPDNSWNGVS*RWQEHH
Trigger: GTGATGCTCCTGCCATCGTCAACTCACACCATTCCA...GGAATTATCGGGGGTGAATATGACCAAAGACCAACACTTCCCTATGTTGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR GCA 90 bp AAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAAGAGGATGCATGTACTaGAGCTTATACACCCCGCTC +
Preference number: 2 (lower is better)
Translates to: KPQTKTRRNEHPEVGRSVRGCMY*SLYTPL
Trigger: GAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCT...TACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCCAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAG +
Preference number: 2 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPQEQGD*QPTIPK
Trigger: CTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTG...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp TCTGGTAGGTTCAGTGCTTGTCGGGTAAAAGCCAGAAGAGGATACACCAGCTGGCTATCAAGGCATCATTaGCATCAGAACAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: SGRFSACRVKARRGYTSWLSRHH*HQNSQL
Trigger: CAGCTGACTGTTCTGATGCCAATGATGCCTTGATAG...CCAGCTGGTGTATCCTCTTCTGGCTTTTACCCGACAAGCACTGAACCTACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CAA 90 bp TGGCAGCCAACTATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTaGGGTCATACCACCCCTAGGGCTATAAATGTATCTCTTAAAAGG +
Preference number: 2 (lower is better)
Translates to: WQPTIPKANLVTEEP*GHTTPRAINVSLKR
Trigger: CCTTTTAAGAGATACATTTATAGCCCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAATAGTTGGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR CAA 90 bp CGATGGCAGGAGCATCACAAACCGCCCTTTCGGGGATTCTTTTCTTaGTATGTGCCTCTTCCTGTACAGTTCTTTCCAATCTGTGTCTTG +
Preference number: 2 (lower is better)
Translates to: RWQEHHKPPFRGFFS*YVPLPVQFFPICVL
Trigger: CAAGACACAGATTGGAAAGAACTGTACAGGAAGAGGCACATACAAAGAAAAGAATCCCCGAAAGGGCGGTTTGTGATGCTCCTGCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR GCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCGAAACCTGTGCCCTCTaGCATATGCGCATTATCTTG +
Preference number: 2 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPETCAL*HMRIIL
Trigger: CAAGATAATGCGCATATGGCAGAGGGCACAGGTTTC...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR GCA 90 bp ATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGGTGCAAGGGGTTGTCTTTTCTTTGTATGTaGCTCTTCCTGTACAGTTCT +
Preference number: 2 (lower is better)
Translates to: IIPGGRRELGNGLGCKGLSFLCM*LFLYSS
Trigger: AGAACTGTACAGGAAGAGGCACATACAAAGAAAAGA...CAACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp GAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATATGCCTGTCCTTGGAATaGATCACTTGGTTGTTCATC +
Preference number: 2 (lower is better)
Translates to: EVGRSVVSVPMGGRPTQICLSLE*ITWLFI
Trigger: GATGAACAACCAAGTGATTCATTCCAAGGACAGGCA...TATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
3UTR-3UTR TCA 90 bp CCTGACTCCAACATGAGAAGATGTATCAACACTATCAAGGCATCATTGGCATCAACAGAGCATGGGTTCTaGGGGATAGAAACCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PDSNMRRCINTIKASLASTEHGF*GIETCA
Trigger: GGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGT...TGATGCCAATGATGCCTTGATAGTGTTGATACATCTTCTCATGTTGGAGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAG +
Preference number: 2 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQQEQGD*QPTIPK
Trigger: CTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTG...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp TCTTTGGTCATATTCACCCCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAAGAACAGTCAGCTGATTaGTACAAGGTCTCTAATGAA +
Preference number: 2 (lower is better)
Translates to: SLVIFTPDNSWRKAGARKEQSAD*YKVSNE
Trigger: TTCATTAGAGACCTTGTATCAATCAGCTGACTGTTC...TTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTGAATATGACCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp GACGATGGCAGGAGCATCACAAACCGCCCTTTCGGGGATTCTTTTCTTTGTATGAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTG +
Preference number: 2 (lower is better)
Translates to: DDGRSITNRPFGDSFLCMRRESF*RSLYML
Trigger: CAACATATACAAAGATCTTCAGAAACTCTCTCGCCT...CATACAAAGAAAAGAATCCCCGAAAGGGCGGTTTGTGATGCTCCTGCCATCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp AAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGATTCACTACAGAGCATaGGTTCTGAGGGATAGAAAC +
Preference number: 2 (lower is better)
Translates to: KTERTSRSRKIRSFSSNGIHYRA*VLRDRN
Trigger: GTTTCTATCCCTCAGAACCCATGCTCTGTAGTGAAT...CCCATTGGAACTGAAACTACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR TCA 90 bp AGAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATTCAGCTTCAAAATTTTaGCTAGGCCCTAACATACTG +
Preference number: 2 (lower is better)
Translates to: RSRKIRSFSSNGRTTNPNSASKF*LGPNIL
Trigger: CAGTATGTTAGGGCCTAGTCAAAATTTTGAAGCTGA...ATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425028.5
3UTR-3UTR CCA 90 bp AAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTCTCTTAAAAGGTTTCTaGGAGTGCAACTCTCAACAC +
Preference number: 2 (lower is better)
Translates to: KTNFNLEENQEQGDWQPTLLKGF*ECNSQH
Trigger: GTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAG...AGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CCA 90 bp ATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAACAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAG +
Preference number: 2 (lower is better)
Translates to: MYLLKGFWECNSQHHNQKQEQGD*QPTIPK
Trigger: CTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTG...TTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR GCA 90 bp GGAGCTCCAGAAATGAAATTACAAATCAATCACATGAATGACAGCCGGCCATCAGATTCTGGTAGCAGCTaGAATCTTTTCACACTTCTA +
Preference number: 2 (lower is better)
Translates to: GAPEMKLQINHMNDSRPSDSGSS*NLFTLL
Trigger: TAGAAGTGTGAAAAGATTGCAGCTGCTACCAGAATC...TGATGGCCGGCTGTCATTCATGTGATTGATTTGTAATTTCATTTCTGGAGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 72 bp GGGGCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTaGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: GAASPWQDGVRS*KWANWIKAWSQ
Trigger: CTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CAA 90 bp CACCCCGCTCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCGTCACAGAGGAACCTTaGGGTCATACCACCCCTAGG +
Preference number: 3 (lower is better)
Translates to: HPAQLPLLRHGQCFGFGAVTEEP*GHTTPR
Trigger: CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGAC...GGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGAGCGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 72 bp TCTAAAGGGAAATCTGTCATTGGGGCCGCCTCGCCCTaGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAAC +
Preference number: 3 (lower is better)
Translates to: SKGKSVIGAASP*QDGVRSWKWAN
Trigger: GTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR GCA 72 bp GTAGCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTaGAGCTTATACACCCCGCTCAACTTCCACTTCTCC +
Preference number: 3 (lower is better)
Translates to: VAELPSQRGCMY*SLYTPLNFHFS
Trigger: GGAGAAGTGGAAGTTGAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR GCA 72 bp CAGGTGAGAGTAGCGGAGCTGCCCTCGCAGAGAGGATaGATGTACTGCAGCTTATACACCCCGCTCAACTTC +
Preference number: 3 (lower is better)
Translates to: QVRVAELPSQRG*MYCSLYTPLNF
Trigger: GAAGTTGAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCTACTCTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 72 bp CGCTCAACTTCCACTTCTCCGGCATGGACAGTGCTTTaGCTTCGGTGCCCTGAGGTATGTAACCTGACTCCA +
Preference number: 3 (lower is better)
Translates to: RSTSTSPAWTVL*LRCPEVCNLTP
Trigger: TGGAGTCAGGTTACATACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 72 bp TGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTaGATCAAAGCGTGGTCTCAGTGGAGGAAACTGGCT +
Preference number: 3 (lower is better)
Translates to: WQDGVRSWKWAN*IKAWSQWRKLA
Trigger: AGCCAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CAA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCGTCACAGAGGAACCTTaGGGTCATACCACCCCTAGG +
Preference number: 3 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVVTEEP*GHTTPR
Trigger: CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGAC...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR TCA 72 bp TTGCCCTTCCACCGATTCACTACAGAGCATGGGTTCTaGGGGATAGAAACCTGTGCCCTCTGCCATATGCGC +
Preference number: 3 (lower is better)
Translates to: LPFHRFTTEHGF*GIETCALCHMR
Trigger: GCGCATATGGCAGAGGGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGTAGTGAATCGGTGGAAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 72 bp GTGCAAGGGGTTGGGATAGAATGGAATGGTGTGAGTTaGCGATGGCAGGAGCATCACAAACCGCCCTTTCGG +
Preference number: 3 (lower is better)
Translates to: VQGVGIEWNGVS*RWQEHHKPPFR
Trigger: CCGAAAGGGCGGTTTGTGATGCTCCTGCCATCGTCAACTCACACCATTCCATTCTATCCCAACCCCTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 72 bp AAACTGGCTGGGCGTCTCCCCAGGACCAGGAATGAGTaGACTGATTGGGTCTCCAACATAGGGAAGTGTTGG +
Preference number: 3 (lower is better)
Translates to: KLAGRLPRTRNE*TDWVSNIGKCW
Trigger: CCAACACTTCCCTATGTTGGAGACCCAATCAGTTCACTCATTCCTGGTCCTGGGGAGACGCCCAGCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 72 bp CCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATaGCCTAGGGTGCAAGGGGTTGGGATAGAATGGAAT +
Preference number: 3 (lower is better)
Translates to: PDNSWRKAGARK*PRVQGVGIEWN
Trigger: ATTCCATTCTATCCCAACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 72 bp TGTTGGTCTTTGGTCATATTCACCCCCGATAATTCCTaGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGGTG +
Preference number: 3 (lower is better)
Translates to: CWSLVIFTPDNS*RKAGARKWPRV
Trigger: CACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTGAATATGACCAAAGACCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CAA 90 bp TCTGGTAGGTTCAGTGCTTGTCGGGTAAAAGCCAGAAGAGGATACACCAGCTGGCCAAGAGCAGGGAGATaGGCAGCCAACTATTCCCAA +
Preference number: 3 (lower is better)
Translates to: SGRFSACRVKARRGYTSWPRAGR*AANYSQ
Trigger: TTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGG...CCAGCTGGTGTATCCTCTTCTGGCTTTTACCCGACAAGCACTGAACCTACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 72 bp AGCTCCAGAAATGAAATTACAAATCAATCACATGAATaGCAGCCGGCCATCAGTTGGCCGACCCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: SSRNEITNQSHE*QPAISWPTPAG
Trigger: CCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGTCATTCATGTGATTGATTTGTAATTTCATTTCTGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CCA 72 bp GGCCCTAACATACTGTCGTCATTCCAAACACCAGACTaGGCTGCCTGTCCTTGGAATGAATCACTTGGTTGT +
Preference number: 3 (lower is better)
Translates to: GPNILSSFQTPD*AACPWNESLGC
Trigger: ACAACCAAGTGATTCATTCCAAGGACAGGCAGCCCAGTCTGGTGTTTGGAATGACGACAGTATGTTAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
3UTR-3UTR CAA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGGTCACAGAGGAACCTTaGGGTCATACCACCCCTAGG +
Preference number: 3 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQVTEEP*GHTTPR
Trigger: CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGAC...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CAA 90 bp CTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCAAGAGCAGGGAGATaGGCAGCCAACTATTCCCAA +
Preference number: 3 (lower is better)
Translates to: LGVQLSTPQSENNTRDQHPRAGR*AANYSQ
Trigger: TTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGG...GTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CAA 90 bp AGGTCACGACAAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGACTATCAAGGCATCATaGGCATCAGAACAGTCAGCT +
Preference number: 3 (lower is better)
Translates to: RSRQTADKDKTERTSRSRTIKAS*ASEQSA
Trigger: AGCTGACTGTTCTGATGCCAATGATGCCTTGATAGT...CCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTTGTCGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 72 bp ATTCCAAACACCAGACTGGGCTGCCTGTCCTTGGAATaGATCACTTGGTTGTTCATCCTGCATGCTAGTCTG +
Preference number: 3 (lower is better)
Translates to: IPNTRLGCLSLE*ITWLFILHASL
Trigger: CAGACTAGCATGCAGGATGAACAACCAAGTGATTCATTCCAAGGACAGGCAGCCCAGTCTGGTGTTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
3UTR CCA 72 bp AACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAGGCCAACCTTGTCACA +
Preference number: 3 (lower is better)
Translates to: NFNLEENQEQGD*QPTIPKANLVT
Trigger: TGTGACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR CCA 72 bp TCGTCATTCCAAACACCAGACTGGGCTGCCTGTCCTTaGAATGAATCACTTGGTTGTTCATCCTGCATGCTA +
Preference number: 3 (lower is better)
Translates to: SSFQTPDWAACP*NESLGCSSCML
Trigger: TAGCATGCAGGATGAACAACCAAGTGATTCATTCCAAGGACAGGCAGCCCAGTCTGGTGTTTGGAATGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
3UTR-3UTR CAA 90 bp TCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGAAACTGGCTAGATCTTTGTATATGTaGGCTACATTTTCCCCTAGT +
Preference number: 3 (lower is better)
Translates to: SWKWANWIKAWSQWRKLARSLYM*ATFSPS
Trigger: ACTAGGGGAAAATGTAGCCAACATATACAAAGATCT...AGCCAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR-3UTR CAA 90 bp AAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGCTTGGAATGAATCACTaGGTTGTTCATCCTGCATGC +
Preference number: 3 (lower is better)
Translates to: KTERTSRSRKIRSFSSNGLGMNH*VVHPAC
Trigger: GCATGCAGGATGAACAACCAAGTGATTCATTCCAAG...CCCATTGGAACTGAAACTACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
3UTR TCA 72 bp CTTCGGTGCCCTGAGGTATGTAACCTGACTCCAACATaGGAAGATGTATCAACACTATCAAGGCATCATTGG +
Preference number: 3 (lower is better)
Translates to: LRCPEVCNLTPT*EDVSTLSRHHW
Trigger: CCAATGATGCCTTGATAGTGTTGATACATCTTCTCATGTTGGAGTCAGGTTACATACCTCAGGGCACCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR TCA 72 bp TACACCAGCTGGTCTTTAAAGAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTGGCTACATTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: YTSWSLKRRESF*RSLYMLATFSP
Trigger: AGGGGAAAATGTAGCCAACATATACAAAGATCTTCAGAAACTCTCTCGCCTCTTTAAAGACCAGCTGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGGCCGACCCCGAGAGCTaGAGGCGGGCAGGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: GVRSWKWANWIKAWSQWRADPES*RRAGGL
Trigger: TAGGCCGCCTGCCCGCCTCCAGCTCTCGGGGTCGGC...CCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420700.5
CDS-3UTR TCA 90 bp GCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCGGCGACTACCGGAGCTaGGGGGTAGCTGAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: AASPWQDGVRSWKWANWIGDYRS*GVAEAK
Trigger: TTTCGCCTCAGCTACCCCTCAGCTCCGGTAGTCGCC...GATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AGCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTAGAGCCCCGCCACAGTaGCCGCCCTGCCACTCGGTC +
Preference number: 4 (lower is better)
Translates to: SGAALAERMHVLQLIHPARAPPQ*PPCHSV
Trigger: GACCGAGTGGCAGGGCGGCCACTGTGGCGGGGCTCT...AGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGGTGCAAGGGAGAGCCCCGCCACAGTaGCCGCCCTGCCACTCGGTC +
Preference number: 4 (lower is better)
Translates to: PDNSWRKAGARKWPRVQGRAPPQ*PPCHSV
Trigger: GACCGAGTGGCAGGGCGGCCACTGTGGCGGGGCTCT...CCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AGCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTCAGCCGGCCATCAGTTaGCCGACCCCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SGAALAERMHVLQLIHPAQPAIS*PTPAGS
Trigger: AGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTG...AGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTCGTGCACAGCAGGGACTaGCTCAGGTGCGAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: AELPSQRGCMYCSLYTPLVHSRD*LRCERK
Trigger: TTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCAC...GAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTCAACTGTACCCCCAGGTaGACAGCAGGGACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: AELPSQRGCMYCSLYTPLNCTPR*TAGTAS
Trigger: TGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAGTT...GAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420700.5
CDS-3UTR CCA 90 bp GAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGCGACGACCCCGGACTaGCGACTACCGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EENQEQGDWQPTIPKANLATTPD*RLPELR
Trigger: CCTCAGCTCCGGTAGTCGCCAGTCCGGGGTCGTCGC...AAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGGGGGCCGCCTCGCCCTaGCAAGATGGGGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRGAASP*QDGVRS
Trigger: GGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCC...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGAGGGAAATCTGTCATTaGGGCCGCCTCGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PWQDGVRSWKWANWIKAWREICH*GRLALA
Trigger: TGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCT...CCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TCTGGTAGGTTCAGTGCTTGTCGGGTAAAAGCCAGAAGAGGATACACCAGCTGGCCTGAGGGCGCCTCCTaGAGCCGACCCCGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGRFSACRVKARRGYTSWPEGAS*SRPREL
Trigger: CAGCTCTCGGGGTCGGCTCCAGGAGGCGCCCTCAGG...CCAGCTGGTGTATCCTCTTCTGGCTTTTACCCGACAAGCACTGAACCTACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420700.5
CDS-3UTR TCA 90 bp GCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCCAGGAGTGGGTCATTTaGAGCAGTAAAGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: AASPWQDGVRSWKWANWIQEWVI*SSKEVT
Trigger: CGTGACCTCTTTACTGCTTCAAATGACCCACTCCTG...GATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATAGGGTCGGCCGATCGATaGCTCCGCGCGCAACGGCGC +
Preference number: 4 (lower is better)
Translates to: EVGRSVVSVPMGGRPTQIGSADR*LRAQRR
Trigger: GCGCCGTTGCGCGCGGAGTCATCGATCGGCCGACCC...TATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420700.5
CDS-3UTR GCA 90 bp AGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTAGGTGCGAGCGCAAATaGCCCAGCGTCGGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: RGEPRAGRLAANYSQGQPRCERK*PSVGSV
Trigger: GACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCT...AGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCGCGCTTCCCGTCGCCTaGACCCTCCGGCTCCGCGAC +
Preference number: 4 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPALPVA*TLRLRD
Trigger: GTCGCGGAGCCGGAGGGTGCAGGCGACGGGAAGCGC...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397426.5
CDS-3UTR CCA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGCAGCCGGCCATCAGTTaGCCGACCCCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRQPAIS*PTPAGS
Trigger: AGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTG...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CACTACAGAGCATGGGTTCTGAGGGATAGAAACCTGTGCCCTCTGCCATATGCGAGGGACTGCCTCAGGTaGGAGCGCAAATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HYRAWVLRDRNLCPLPYARDCLR*ERKCPS
Trigger: GCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCT...CGCATATGGCAGAGGGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGTAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp AATCACATGAATGACAGCCGGCCATCAGTTGGCCGACCCCTGCTGGGTCTAAAGCTCCGGCATGGACAGTaGTTTGGCTTCGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NHMNDSRPSVGRPLLGLKLRHGQ*FGFGAL
Trigger: CAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAG...CTTTAGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGTCATTCATGTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGCTCCGGCATGGACAGTaGTTTGGCTTCGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QDGVRSWKWANWIKAWSQLRHGQ*FGFGAL
Trigger: CAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAG...CTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAGCCGGCCATCAGTTGGCCGACCCCTGCTGGGTCTAAAGGGAAATCTGTCATTACCCCCGATAATTCCTaGAGGAAGGCGGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: QPAISWPTPAGSKGKSVITPDNS*RKAGAR
Trigger: CCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGT...AATGACAGATTTCCCTTTAGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCGACCCCTGCTGGGTCTAAAGGGAAATCTGTCATTGGGGCCGCCTCGCCCTGGAACTGGATCAAAGCGTaGTCTCAGTGGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: PTPAGSKGKSVIGAASPWNWIKA*SQWRKL
Trigger: CAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTT...CCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTAGACCCAGCAGGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CACTACAGAGCATGGGTTCTGAGGGATAGAAACCTGTGCCCTCTGCCATATGCGGTGCACAGCAGGGACTaGCTCAGGTGCGAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: HYRAWVLRDRNLCPLPYAVHSRD*LRCERK
Trigger: TTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCAC...CGCATATGGCAGAGGGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGTAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGCTCCGGCATGGACAGTaGTTTGGCTTCGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRLRHGQ*FGFGAL
Trigger: CAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAG...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CACCCCGCTCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCCCCTCGCAGAGAGGATaGATGTACTGCAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: HPAQLPLLRHGQCFGFGAPSQRG*MYCSLY
Trigger: GTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGG...GGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGAGCGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCCTATCAAGGCATCATTaGCATCAGAACAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AASPWQDGVRSWKWANWILSRHH*HQNSQL
Trigger: CAGCTGACTGTTCTGATGCCAATGATGCCTTGATAG...GATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTATGTAACCTGACTCCATCCACTTCTCCGGCATaGACAGTGCTTTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PAWTVLWLRCPEVCNLTPSTSPA*TVLWLR
Trigger: CCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGA...TGGAGTCAGGTTACATACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCGACCCCTGCTGGGTCTAAAGGGAAATCTGTCATTGGGGCCGCCTCGCCCTGGTGGGATAGAATGGAATaGTGTGAGTTGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: PTPAGSKGKSVIGAASPWWDRME*CELTMA
Trigger: TGCCATCGTCAACTCACACCATTCCATTCTATCCCA...CCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTAGACCCAGCAGGGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTAGCGGGAGCTAGGAAATaGCCTAGGGTGCAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: STSTSPAWTVLWLRCPEVAGARK*PRVQGV
Trigger: AACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGC...TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GCCGCCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCGGAAGTGTTGGTCTTTaGTCATATTCACCCCCGATA +
Preference number: 4 (lower is better)
Translates to: AASPWQDGVRSWKWANWIGSVGL*SYSPPI
Trigger: TATCGGGGGTGAATATGACCAAAGACCAACACTTCC...GATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CACTACAGAGCATGGGTTCTGAGGGATAGAAACCTGTGCCCTCTGCCATATGCGCTCAGTGGAGGAAACTaGCTGGGCGTCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HYRAWVLRDRNLCPLPYALSGGN*LGVSPG
Trigger: TCCTGGGGAGACGCCCAGCCAGTTTCCTCCACTGAG...CGCATATGGCAGAGGGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGTAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAAAGCGTGGTCTCAGTaGAGGAAACTGGCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: DGVRSWKWANWIKAWSQWKAWSQ*RKLAGR
Trigger: ACGCCCAGCCAGTTTCCTCCACTGAGACCACGCTTT...CCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGGGGGCCGCCTCGCCCTaGCAAGATGGGGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: KTERTSRSRKIRSFSSNGGAASP*QDGVRS
Trigger: GGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCC...CCCATTGGAACTGAAACTACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACTGCCACTCGGTCTCTaGAATAGAGCGCCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQLPLGL*NRAPAP
Trigger: AGGGGCGGGCGCTCTATTCCAGAGACCGAGTGGCAG...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCACAGTGGCCGCCCTaGCACTCGGTCTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQPQWPP*HSVSGI
Trigger: TATTCCAGAGACCGAGTGGCAGGGCGGCCACTGTGG...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAAGAGCCCCGCCACAGTaGCCGCCCTGCCACTCGGTC +
Preference number: 4 (lower is better)
Translates to: PQSENNTRDQHPKELTSVRAPPQ*PPCHSV
Trigger: GACCGAGTGGCAGGGCGGCCACTGTGGCGGGGCTCT...TACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGGCGACGACCCCGGACTaGCGACTACCGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKEATTPD*RLPELR
Trigger: CCTCAGCTCCGGTAGTCGCCAGTCCGGGGTCGTCGC...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGCGGGAGCTAGGAAATaGCCTAGGGTGCAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: EENQEQGDWQPTIPKANLAGARK*PRVQGV
Trigger: AACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGC...AAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCGCGGGAGCTAGGAAATaGCCTAGGGTGCAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVAGARK*PRVQGV
Trigger: AACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGC...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTATGTAACCTGACTCCAGTTAGGTCCTGGAAGTaGGCCAACTGGATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: PAWTVLWLRCPEVCNLTPVRSWK*ANWIKA
Trigger: CGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAAC...TGGAGTCAGGTTACATACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGGGGGCCGCCTCGCCCTaGCAAGATGGGGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKEGAASP*QDGVRS
Trigger: GGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCC...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AGGTCACGACAAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAGGGAAATCTGTCATTaGGGCCGCCTCGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RSRQTADKDKTERTSRSRREICH*GRLALA
Trigger: TGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCT...CCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTTGTCGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTCAATCACAGAGGAACCTTTaGGTCATACCACCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: GAALAERMHVLQLIHPAQSQRNL*VIPPLG
Trigger: CCCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGA...TTGAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CCGACCCCTGCTGGGTCTAAAGGGAAATCTGTCATTGGGGCCGCCTCGCCCTGGTCAGCTTCAAAATTTTaGCTAGGCCCTAACATACTG +
Preference number: 4 (lower is better)
Translates to: PTPAGSKGKSVIGAASPWSASKF*LGPNIL
Trigger: CAGTATGTTAGGGCCTAGTCAAAATTTTGAAGCTGA...CCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTAGACCCAGCAGGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425028.5
CDS-3UTR CCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCGCATGGACAGTGCTTTaGCTTCGGTGCCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVAWTVL*LRCPEV
Trigger: TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGC...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTCCACTTCTCCGGCATaGACAGTGCTTTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: RGEPRAGRLAANYSQGQPSTSPA*TVLWLR
Trigger: CCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGA...AGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGTCCACTTCTCCGGCATaGACAGTGCTTTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRSTSPA*TVLWLR
Trigger: CCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGA...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGAAAGCGTGGTCTCAGTaGAGGAAACTGGCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRKAWSQ*RKLAGR
Trigger: ACGCCCAGCCAGTTTCCTCCACTGAGACCACGCTTT...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGGGGCCGCCTCGCCCTaGCAAGATGGGGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASENKLQSRGEPRAGRLAGAASP*QDGVRS
Trigger: GGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCC...TGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAGCCGGCCATCAGTTaGCCGACCCCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KLQSRGEPRAGRLAANYSQPAIS*PTPAGS
Trigger: AGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTG...GGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR CAA 72 bp GGTGCAAGGGGTTGGGATAGAATGGAATGGTGTGAGTaGACGATGGCAGGAGCATCACAAACCGCCCTTTCG +
Preference number: 4 (lower is better)
Translates to: GARGWDRMEWCE*TMAGASQTALS
Trigger: CGAAAGGGCGGTTTGTGATGCTCCTGCCATCGTCAACTCACACCATTCCATTCTATCCCAACCCCTTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCACAGAGCATGGGTTCTaGGGGATAGAAACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVTEHGF*GIETCA
Trigger: GGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGT...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCTGGAATGGTGTGAGTTaGCGATGGCAGGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVWNGVS*RWQEHH
Trigger: GTGATGCTCCTGCCATCGTCAACTCACACCATTCCA...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp TCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTAAGGACCAGGAATGAGTaGACTGATTGGGTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: STSTSPAWTVLWLRCPEVRTRNE*TDWVSN
Trigger: GTTGGAGACCCAATCAGTTCACTCATTCCTGGTCCT...TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp AAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTACCACAGTGGCCGCCCTaGCACTCGGTCTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: KPQTKTRRNEHPEVGRSVPQWPP*HSVSGI
Trigger: TATTCCAGAGACCGAGTGGCAGGGCGGCCACTGTGG...TACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGAGGGACTGCCTCAGGTaGGAGCGCAAATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VQLSTPQSENNTRDQHPKRDCLR*ERKCPS
Trigger: GCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCT...CTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp AGCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTAATGAATGTGGCACTTaGCCTTCCACCGATTCACTA +
Preference number: 4 (lower is better)
Translates to: SGAALAERMHVLQLIHPANECGT*PSTDSL
Trigger: TAGTGAATCGGTGGAAGGGCAAGTGCCACATTCATT...AGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GACGATGGCAGGAGCATCACAAACCGCCCTTTCGGGGATTCTTTTCTTTGTATGATCTGTACCCCCAGGTaGACAGCAGGGACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: DDGRSITNRPFGDSFLCMICTPR*TAGTAS
Trigger: TGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAGAT...CATACAAAGAAAAGAATCCCCGAAAGGGCGGTTTGTGATGCTCCTGCCATCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425028.5
CDS-3UTR CCA 90 bp CCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGGTGCAAGGGCTATCAAGGCATCATTaGCATCAGAACAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PDNSWRKAGARKWPRVQGLSRHH*HQNSQL
Trigger: CAGCTGACTGTTCTGATGCCAATGATGCCTTGATAG...CCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GCTCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTGGGATAGAATGGAATaGTGTGAGTTGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: AQLPLLRHGQCFGFGALRWDRME*CELTMA
Trigger: TGCCATCGTCAACTCACACCATTCCATTCTATCCCA...CCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATACACTCAGTGGAGGAAACTaGCTGGGCGTCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SRKIRSFSSNGRTTNPNTLSGGN*LGVSPG
Trigger: TCCTGGGGAGACGCCCAGCCAGTTTCCTCCACTGAG...TGTATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGGAAGTGGGCCAACTaGATCAAAGCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RGEPRAGRLAANYSQGQPWKWAN*IKAWSQ
Trigger: CTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCA...AGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACGTTAGGTCCTGGAAGTaGGCCAACTGGATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: LEENQEQGDWQPTIPKANVRSWK*ANWIKA
Trigger: CGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAAC...GTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAGGGAAATCTGTCATTaGGGCCGCCTCGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPREICH*GRLALA
Trigger: TGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCT...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCAGCCGGCCATCAGTTaGCCGACCCCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQQPAIS*PTPAGS
Trigger: AGACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTG...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR CAA 72 bp AGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTaGTCACAGAGGAACCTTTGGGTCATACCACCCCTA +
Preference number: 4 (lower is better)
Translates to: REIGSQLFPRPT*SQRNLWVIPPL
Trigger: TAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAAGGTGCGAGCGCAAATaGCCCAGCGTCGGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTRCERK*PSVGSV
Trigger: GACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCT...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCTCCGGCATGGACAGTaGTTTGGCTTCGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGVQLSTPQSENNTRDQHLRHGQ*FGFGAL
Trigger: CAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAG...GTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACTCTGATTGGAGCTGGTaGCCAAAGAGGGTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LEENQEQGDWQPTIPKANSDWSW*PKRVAH
Trigger: ATGAGCAACCCTCTTTGGCCACCAGCTCCAATCAGA...GTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCACCCCCGATAATTCCTaGAGGAAGGCGGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPTPDNS*RKAGAR
Trigger: CCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGT...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTCAACATAGGGAAGTGTTaGTCTTTGGTCATATTCACC +
Preference number: 4 (lower is better)
Translates to: AELPSQRGCMYCSLYTPLNIGKC*SLVIFT
Trigger: GGTGAATATGACCAAAGACCAACACTTCCCTATGTT...GAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGCTCAGTGGAGGAAACTaGCTGGGCGTCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKELSGGN*LGVSPG
Trigger: TCCTGGGGAGACGCCCAGCCAGTTTCCTCCACTGAG...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGGTGCAAGGGCTCTTAAAAGGTTTCTaGGAGTGCAACTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: PDNSWRKAGARKWPRVQGLLKGF*ECNSQH
Trigger: GTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAG...CCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTCAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RGEPRAGRLAANYSQGQPQEQGD*QPTIPK
Trigger: CTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTG...AGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GCTCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGGAACAGTCAGCTGATTaGTACAAGGTCTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: AQLPLLRHGQCFGFGALREQSAD*YKVSNE
Trigger: TTCATTAGAGACCTTGTATCAATCAGCTGACTGTTC...CCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CCTCGCCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCTGTGTCTTGAACTCTaGCAGTATTGTCTCGAAAAT +
Preference number: 4 (lower is better)
Translates to: PRPGKMGLGPGSGPTGSKLCLEL*QYCLEN
Trigger: ATTTTCGAGACAATACTGTCAGAGTTCAAGACACAG...CTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp TCATTTGAAGCAGTAAAGAGGTCACGACAAACCGCAGACAAAGACAAGACGGAACCACAGTGGCCGCCCTaGCACTCGGTCTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: SFEAVKRSRQTADKDKTEPQWPP*HSVSGI
Trigger: TATTCCAGAGACCGAGTGGCAGGGCGGCCACTGTGG...TTCCGTCTTGTCTTTGTCTGCGGTTTGTCGTGACCTCTTTACTGCTTCAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGAAACCTGTGCCCTCTaGCATATGCGCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: EENQEQGDWQPTIPKANLETCAL*HMRIIL
Trigger: CAAGATAATGCGCATATGGCAGAGGGCACAGGTTTC...AAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCCTCGCAGAGAGGATaGATGTACTGCAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQPSQRG*MYCSLY
Trigger: GTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGG...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp AGCGGAGCTGCCCTCGCAGAGAGGATGCATGTACTGCAGCTTATACACCCCGCTGATTCTGGTAGCAGCTaGAATCTTTTCACACTTCTA +
Preference number: 4 (lower is better)
Translates to: SGAALAERMHVLQLIHPADSGSS*NLFTLL
Trigger: TAGAAGTGTGAAAAGATTGCAGCTGCTACCAGAATC...AGCGGGGTGTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGAGAGGATACACCAGCTaGTCTTTAAAGAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRRGYTS*SLKRRE
Trigger: CTCTCGCCTCTTTAAAGACCAGCTGGTGTATCCTCT...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAAAAGCGTGGTCTCAGTaGAGGAAACTGGCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: KPQTKTRRNEHPEVGRSVKAWSQ*RKLAGR
Trigger: ACGCCCAGCCAGTTTCCTCCACTGAGACCACGCTTT...TACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQQEQGD*QPTIPK
Trigger: CTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTG...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCTGCCTGTCCTTGGAATaGATCACTTGGTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVCLSLE*ITWLFI
Trigger: GATGAACAACCAAGTGATTCATTCCAAGGACAGGCA...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGCTGTGTCTTGAACTCTaGCAGTATTGTCTCGAAAAT +
Preference number: 4 (lower is better)
Translates to: DGVRSWKWANWIKAWSQWLCLEL*QYCLEN
Trigger: ATTTTCGAGACAATACTGTCAGAGTTCAAGACACAG...CCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAGTGCACAGCAGGGACTaGCTCAGGTGCGAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTVHSRD*LRCERK
Trigger: TTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCAC...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAAACTGTACCCCCAGGTaGACAGCAGGGACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PQSENNTRDQHPKELTSVNCTPR*TAGTAS
Trigger: TGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAGTT...TACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000420700.5
CDS-3UTR GCA 90 bp GAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTGGCCAAAGAGGGTTaGTCATTATTCTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: EENQEQGDWQPTIPKANLVAKEG*SLFWSE
Trigger: TTCACTCCAGAATAATGAGCAACCCTCTTTGGCCAC...AAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CACTACAGAGCATGGGTTCTGAGGGATAGAAACCTGTGCCCTCTGCCATATGCGTTCTGGAGTGAAGAATaGTCTGAATCTGTACCCCCA +
Preference number: 4 (lower is better)
Translates to: HYRAWVLRDRNLCPLPYAFWSEE*SESVPP
Trigger: TGGGGGTACAGATTCAGAGCATTCTTCACTCCAGAA...CGCATATGGCAGAGGGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGTAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425028.5
CDS-3UTR CCA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGCTATCAAGGCATCATTaGCATCAGAACAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRLSRHH*HQNSQL
Trigger: CAGCTGACTGTTCTGATGCCAATGATGCCTTGATAG...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGGCGGGAGCTAGGAAATaGCCTAGGGTGCAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQAGARK*PRVQGV
Trigger: AACCCCTTGCACCCTAGGCCATTTCCTAGCTCCCGC...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTACCCCCGATAATTCCTaGAGGAAGGCGGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: TPQSENNTRDQHPKELTSTPDNS*RKAGAR
Trigger: CCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGT...AGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCGGAAGTGTTGGTCTTTaGTCATATTCACCCCCGATA +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVGSVGL*SYSPPI
Trigger: TATCGGGGGTGAATATGACCAAAGACCAACACTTCC...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGAAAGCGTGGTCTCAGTaGAGGAAACTGGCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKEKAWSQ*RKLAGR
Trigger: ACGCCCAGCCAGTTTCCTCCACTGAGACCACGCTTT...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGGTTAGGTCCTGGAAGTaGGCCAACTGGATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: KTERTSRSRKIRSFSSNGVRSWK*ANWIKA
Trigger: CGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAAC...CCCATTGGAACTGAAACTACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAAGGGAAATCTGTCATTaGGGCCGCCTCGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTREICH*GRLALA
Trigger: TGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCT...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATGGCGACTACCGGAGCTaGGGGGTAGCTGAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENGDYRS*GVAEAK
Trigger: TTTCGCCTCAGCTACCCCTCAGCTCCGGTAGTCGCC...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp ATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAGGCGACTACCGGAGCTaGGGGGTAGCTGAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: MYLLKGFWECNSQHHNQKGDYRS*GVAEAK
Trigger: TTTCGCCTCAGCTACCCCTCAGCTCCGGTAGTCGCC...TTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp TCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTAGAACAGTCAGCTGATTaGTACAAGGTCTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: STSTSPAWTVLWLRCPEVEQSAD*YKVSNE
Trigger: TTCATTAGAGACCTTGTATCAATCAGCTGACTGTTC...TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp TCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTAAACCTGACTCCAACATaGGAAGATGTATCAACACTA +
Preference number: 4 (lower is better)
Translates to: STSTSPAWTVLWLRCPEVNLTPT*EDVSTL
Trigger: TAGTGTTGATACATCTTCTCATGTTGGAGTCAGGTT...TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACTGAGGTATGTAACCTaGCTCCAACATGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQLRYVT*LQHEKM
Trigger: CATCTTCTCATGTTGGAGTCAGGTTACATACCTCAG...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GATACAAGGTCTCTAATGAATGTGGCACTTGCCCTTCCACCGATTCACTACAGATGGAATGGTGTGAGTTaGCGATGGCAGGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: DTRSLMNVALALPPIHYRWNGVS*RWQEHH
Trigger: GTGATGCTCCTGCCATCGTCAACTCACACCATTCCA...TCTGTAGTGAATCGGTGGAAGGGCAAGTGCCACATTCATTAGAGACCTTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATACAAGGACCAGGAATGAGTaGACTGATTGGGTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SRKIRSFSSNGRTTNPNTRTRNE*TDWVSN
Trigger: GTTGGAGACCCAATCAGTTCACTCATTCCTGGTCCT...TGTATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAATACAAATCAATCACATaGATGACAGCCGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQYKSIT*MTAGHQ
Trigger: CTGATGGCCGGCTGTCATTCATGTGATTGATTTGTA...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp TCTTTGGTCATATTCACCCCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAAGAAACCTGTGCCCTCTaGCATATGCGCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: SLVIFTPDNSWRKAGARKETCAL*HMRIIL
Trigger: CAAGATAATGCGCATATGGCAGAGGGCACAGGTTTC...TTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTGAATATGACCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATACCCTCGCAGAGAGGATaGATGTACTGCAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: EVGRSVVSVPMGGRPTQIPSQRG*MYCSLY
Trigger: GTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGG...TATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTATTCACTACAGAGCATaGGTTCTGAGGGATAGAAAC +
Preference number: 4 (lower is better)
Translates to: EENQEQGDWQPTIPKANLIHYRA*VLRDRN
Trigger: GTTTCTATCCCTCAGAACCCATGCTCTGTAGTGAAT...AAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGCATGGACAGTGCTTTaGCTTCGGTGCCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PQSENNTRDQHPKELTSVAWTVL*LRCPEV
Trigger: TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGC...TACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TCATATTCACCCCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGAAGTGTTGGTCTTTaGTCATATTCACCCCCGATA +
Preference number: 4 (lower is better)
Translates to: SYSPPIIPGGRRELGNGLGSVGL*SYSPPI
Trigger: TATCGGGGGTGAATATGACCAAAGACCAACACTTCC...TAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTGAATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGTCACAGAGGAACCTTTaGGTCATACCACCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: VQLSTPQSENNTRDQHPKSQRNL*VIPPLG
Trigger: CCCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGA...CTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGTCACAGAGGAACCTTTaGGTCATACCACCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LSTPQSENNTRDQHPKELSQRNL*VIPPLG
Trigger: CCCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGA...CAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATCTGCCACTCGGTCTCTaGAATAGAGCGCCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENLPLGL*NRAPAP
Trigger: AGGGGCGGGCGCTCTATTCCAGAGACCGAGTGGCAG...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CAA 72 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATaGGCAGCCAACTATTCCCAAGGCCAACCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KLQSRGEPRAGR*AANYSQGQPCH
Trigger: GTGACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCTCAGCTTCAAAATTTTaGCTAGGCCCTAACATACTG +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVSASKF*LGPNIL
Trigger: CAGTATGTTAGGGCCTAGTCAAAATTTTGAAGCTGA...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAACAGAGCATGGGTTCTaGGGGATAGAAACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ASENKLQSRGEPRAGRLATEHGF*GIETCA
Trigger: GGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGT...TGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGACAGAGCATGGGTTCTaGGGGATAGAAACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQTEHGF*GIETCA
Trigger: GGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGT...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCGAACAGTCAGCTGATTaGTACAAGGTCTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVEQSAD*YKVSNE
Trigger: TTCATTAGAGACCTTGTATCAATCAGCTGACTGTTC...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGAACCTGACTCCAACATaGGAAGATGTATCAACACTA +
Preference number: 4 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRNLTPT*EDVSTL
Trigger: TAGTGTTGATACATCTTCTCATGTTGGAGTCAGGTT...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTCTGTGTCTTGAACTCTaGCAGTATTGTCTCGAAAAT +
Preference number: 4 (lower is better)
Translates to: RGEPRAGRLAANYSQGQPLCLEL*QYCLEN
Trigger: ATTTTCGAGACAATACTGTCAGAGTTCAAGACACAG...AGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTTGGAATGGTGTGAGTTaGCGATGGCAGGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: KTNFNLEENQEQGDWQPTWNGVS*RWQEHH
Trigger: GTGATGCTCCTGCCATCGTCAACTCACACCATTCCA...AGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AGAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATAATCAATCACATGAATaGCAGCCGGCCATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RSRKIRSFSSNGRTTNPNNQSHE*QPAISW
Trigger: CCAACTGATGGCCGGCTGTCATTCATGTGATTGATT...ATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAAGGGACTGCCTCAGGTaGGAGCGCAAATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YLLKGFWECNSQHHNQKIRDCLR*ERKCPS
Trigger: GCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCT...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTTTCTGGAGTGAAGAATaGTCTGAATCTGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: EENQEQGDWQPTIPKANLFWSEE*SESVDE
Trigger: TTCATCCACAGATTCAGAGCATTCTTCACTCCAGAA...AAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000397426.5
CDS-3UTR GCA 90 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCAGAGGATGCATGTACTaGAGCTTATACACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KLQSRGEPRAGRLAANYSRGCMY*SLYTPL
Trigger: GAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCT...GGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GTCTCCAACATAGGGAAGTGTTGGTCTTTGGTCATATTCACCCCCGATAATTCCAGAGGATGCATGTACTaGAGCTTATACACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VSNIGKCWSLVIFTPDNSRGCMY*SLYTPL
Trigger: GAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCT...GGAATTATCGGGGGTGAATATGACCAAAGACCAACACTTCCCTATGTTGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGCCCTCGCAGAGAGGATaGATGTACTGCAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: LSTPQSENNTRDQHPKELPSQRG*MYCSLY
Trigger: GTATAAGCTGCAGTACATGCATCCTCTCTGCGAGGG...CAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCGGTTGCTCATTATTCTaGAGTGAAGAATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVGCSLF*SEECSE
Trigger: TTCAGAGCATTCTTCACTCCAGAATAATGAGCAACC...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCTGGGCTGCCTGTCCTTaGAATGAATCACTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPWAACP*NESLGC
Trigger: ACAACCAAGTGATTCATTCCAAGGACAGGCAGCCCA...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAAATTCACTACAGAGCATaGGTTCTGAGGGATAGAAAC +
Preference number: 4 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQIHYRA*VLRDRN
Trigger: GTTTCTATCCCTCAGAACCCATGCTCTGTAGTGAAT...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAGCATGGACAGTGCTTTaGCTTCGGTGCCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTAWTVL*LRCPEV
Trigger: TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGC...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAAGAGGATACACCAGCTaGTCTTTAAAGAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: KPQTKTRRNEHPEVGRSVRGYTS*SLKRRE
Trigger: CTCTCGCCTCTTTAAAGACCAGCTGGTGTATCCTCT...TACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCAACATAGGGAAGTGTTaGTCTTTGGTCATATTCACC +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVNIGKC*SLVIFT
Trigger: GGTGAATATGACCAAAGACCAACACTTCCCTATGTT...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATCTCAGTGGAGGAAACTaGCTGGGCGTCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENLSGGN*LGVSPG
Trigger: TCCTGGGGAGACGCCCAGCCAGTTTCCTCCACTGAG...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAGCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGTGGAAGTGGGCCAACTaGATCAAAGCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: QHQKTNFNLEENQEQGDWWKWAN*IKAWSQ
Trigger: CTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCA...CCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAGCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGTCACAGAGGAACCTTTaGGTCATACCACCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: QHQKTNFNLEENQEQGDWSQRNL*VIPPLG
Trigger: CCCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGA...CCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGTCTCTTCATCTCCAGTaGGGGGATCCTTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSTPQSENNTRDQHPKELSLHLQ*GDPCSS
Trigger: TGAACTACAAGGATCCCCTCACTGGAGATGAAGAGA...CAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000397426.5
CDS-3UTR TCA 90 bp GTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGTCTCTTCATCTCCAGTaGGGGGATCCTTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: VQLSTPQSENNTRDQHPKSLHLQ*GDPCSS
Trigger: TGAACTACAAGGATCCCCTCACTGGAGATGAAGAGA...CTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000397426.5
CDS-3UTR TCA 90 bp GAAGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATACTGAGGTATGTAACCTaGCTCCAACATGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: EVGRSVVSVPMGGRPTQILRYVT*LQHEKM
Trigger: CATCTTCTCATGTTGGAGTCAGGTTACATACCTCAG...TATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CAGCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGGAGTGGGTCATTTaGAGCAGTAAAGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: QHQKTNFNLEENQEQGDWQEWVI*SSKEVT
Trigger: CGTGACCTCTTTACTGCTTCAAATGACCCACTCCTG...CCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTCAGGAGTGGGTCATTTaGAGCAGTAAAGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: KTNFNLEENQEQGDWQPTQEWVI*SSKEVT
Trigger: CGTGACCTCTTTACTGCTTCAAATGACCCACTCCTG...AGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGAGGACCAGGAATGAGTaGACTGATTGGGTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQRTRNE*TDWVSN
Trigger: GTTGGAGACCCAATCAGTTCACTCATTCCTGGTCCT...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACAATCAATCACATGAATaGCAGCCGGCCATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LGVQLSTPQSENNTRDQHNQSHE*QPAISW
Trigger: CCAACTGATGGCCGGCTGTCATTCATGTGATTGATT...GTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCAATCAATCACATGAATaGCAGCCGGCCATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: KLQSRGEPRAGRLAANYSNQSHE*QPAISW
Trigger: CCAACTGATGGCCGGCTGTCATTCATGTGATTGATT...GGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCGTGGCCAAAGAGGGTTaGTCATTATTCTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPVAKEG*SLFWSE
Trigger: TTCACTCCAGAATAATGAGCAACCCTCTTTGGCCAC...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGAGAGGATGCATGTACTaGAGCTTATACACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQRGCMY*SLYTPL
Trigger: GAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCT...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp TCATATTCACCCCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATGGCCTAGATTCTGGTAGCAGCTaGAATCTTTTCACACTTCTA +
Preference number: 4 (lower is better)
Translates to: SYSPPIIPGGRRELGNGLDSGSS*NLFTLL
Trigger: TAGAAGTGTGAAAAGATTGCAGCTGCTACCAGAATC...TAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTGAATATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCTCTTTTCTTTGTATGTaGCTCTTCCTGTACAGTTCT +
Preference number: 4 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVSFLCM*LFLYSS
Trigger: AGAACTGTACAGGAAGAGGCACATACAAAGAAAAGA...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGAGAGGATACACCAGCTaGTCTTTAAAGAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKERGYTS*SLKRRE
Trigger: CTCTCGCCTCTTTAAAGACCAGCTGGTGTATCCTCT...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGAACTGGATCAAAGCGTaGTCTCAGTGGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKENWIKA*SQWRKL
Trigger: CAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTT...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAGTTAGGTCCTGGAAGTaGGCCAACTGGATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTVRSWK*ANWIKA
Trigger: CGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAAC...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR CAA 72 bp ACTGATTGGGTCTCCAACATAGGGAAGTGTTGGTCTTaGGTCATATTCACCCCCGATAATTCCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TDWVSNIGKCWS*VIFTPDNSWRK
Trigger: CTTCCTCCAGGAATTATCGGGGGTGAATATGACCAAAGACCAACACTTCCCTATGTTGGAGACCCAATCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCTGAGGTATGTAACCTaGCTCCAACATGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LGVQLSTPQSENNTRDQHLRYVT*LQHEKM
Trigger: CATCTTCTCATGTTGGAGTCAGGTTACATACCTCAG...GTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACACAGGAGTGGGTCATTTaGAGCAGTAAAGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTQEWVI*SSKEVT
Trigger: CGTGACCTCTTTACTGCTTCAAATGACCCACTCCTG...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGAAACCTGTGCCCTCTaGCATATGCGCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: ASENKLQSRGEPRAGRLAETCAL*HMRIIL
Trigger: CAAGATAATGCGCATATGGCAGAGGGCACAGGTTTC...TGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp AAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTGAAACCTGTGCCCTCTaGCATATGCGCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: KTNFNLEENQEQGDWQPTETCAL*HMRIIL
Trigger: CAAGATAATGCGCATATGGCAGAGGGCACAGGTTTC...AGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGAATGAATGTGGCACTTaGCCTTCCACCGATTCACTA +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKENECGT*PSTDSL
Trigger: TAGTGAATCGGTGGAAGGGCAAGTGCCACATTCATT...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCAATGAATGTGGCACTTaGCCTTCCACCGATTCACTA +
Preference number: 4 (lower is better)
Translates to: KLQSRGEPRAGRLAANYSNECGT*PSTDSL
Trigger: TAGTGAATCGGTGGAAGGGCAAGTGCCACATTCATT...GGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAGCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGTGGGCTGCCTGTCCTTaGAATGAATCACTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: QHQKTNFNLEENQEQGDWWAACP*NESLGC
Trigger: ACAACCAAGTGATTCATTCCAAGGACAGGCAGCCCA...CCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATTCCACTTCTCCGGCATaGACAGTGCTTTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENSTSPA*TVLWLR
Trigger: CCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGA...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CACTACAGAGCATGGGTTCTGAGGGATAGAAACCTGTGCCCTCTGCCATATGCGGATCTTTGTATATGTTaGCTACATTTTCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: HYRAWVLRDRNLCPLPYADLCIC*LHFPLV
Trigger: AACTAGGGGAAAATGTAGCCAACATATACAAAGATC...CGCATATGGCAGAGGGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAAGAGGATACACCAGCTaGTCTTTAAAGAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: PQSENNTRDQHPKELTSVRGYTS*SLKRRE
Trigger: CTCTCGCCTCTTTAAAGACCAGCTGGTGTATCCTCT...TACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTAACTGGATCAAAGCGTaGTCTCAGTGGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: TPQSENNTRDQHPKELTSNWIKA*SQWRKL
Trigger: CAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTT...AGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTAACTGGATCAAAGCGTaGTCTCAGTGGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: KTNFNLEENQEQGDWQPTNWIKA*SQWRKL
Trigger: CAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTT...AGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTACTCTTAAAAGGTTTCTaGGAGTGCAACTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: KPQTKTRRNEHPEVGRSVLLKGF*ECNSQH
Trigger: GTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAG...TACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
3UTR CAA 72 bp GAGCATCACAAACCGCCCTTTCGGGGATTCTTTTCTTaGTATGTGCCTCTTCCTGTACAGTTCTTTCCAATC +
Preference number: 4 (lower is better)
Translates to: EHHKPPFRGFFS*YVPLPVQFFPI
Trigger: GATTGGAAAGAACTGTACAGGAAGAGGCACATACAAAGAAAAGAATCCCCGAAAGGGCGGTTTGTGATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGAGAAACAATCCCATATaGAGCCAAGGTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VQLSTPQSENNTRDQHPKRNNPI*SQGLFI
Trigger: GATGAAGAGACCTTGGCTTCATATGGGATTGTTTCT...CTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000397426.5
CDS-3UTR TCA 90 bp ACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTTGCCTGTCCTTGGAATaGATCACTTGGTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: TPQSENNTRDQHPKELTSCLSLE*ITWLFI
Trigger: GATGAACAACCAAGTGATTCATTCCAAGGACAGGCA...AGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATACAGAGCATGGGTTCTaGGGGATAGAAACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENTEHGF*GIETCA
Trigger: GGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGT...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AGGAGCATCACAAACCGCCCTTTCGGGGATTCTTTTCTTTGTATGTGCCTCTTCAACCTGACTCCAACATaGGAAGATGTATCAACACTA +
Preference number: 4 (lower is better)
Translates to: RSITNRPFGDSFLCMCLFNLTPT*EDVSTL
Trigger: TAGTGTTGATACATCTTCTCATGTTGGAGTCAGGTT...GAAGAGGCACATACAAAGAAAAGAATCCCCGAAAGGGCGGTTTGTGATGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTACTGAGGTATGTAACCTaGCTCCAACATGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: PQSENNTRDQHPKELTSVLRYVT*LQHEKM
Trigger: CATCTTCTCATGTTGGAGTCAGGTTACATACCTCAG...TACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTG +
Preference number: 4 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPRRESF*RSLYML
Trigger: CAACATATACAAAGATCTTCAGAAACTCTCTCGCCT...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAATGGAATGGTGTGAGTTaGCGATGGCAGGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: NVSLKRFLGVQLSTPQSEWNGVS*RWQEHH
Trigger: GTGATGCTCCTGCCATCGTCAACTCACACCATTCCA...TTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CAGCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGTACAAATCAATCACATaGATGACAGCCGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: QHQKTNFNLEENQEQGDWYKSIT*MTAGHQ
Trigger: CTGATGGCCGGCTGTCATTCATGTGATTGATTTGTA...CCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GATACAAGGTCTCTAATGAATGTGGCACTTGCCCTTCCACCGATTCACTACAGATCAGCTTCAAAATTTTaGCTAGGCCCTAACTGTACC +
Preference number: 4 (lower is better)
Translates to: DTRSLMNVALALPPIHYRSASKF*LGPNCT
Trigger: GGTACAGTTAGGGCCTAGTCAAAATTTTGAAGCTGA...TCTGTAGTGAATCGGTGGAAGGGCAAGTGCCACATTCATTAGAGACCTTGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420700.5
CDS-3UTR GCA 90 bp AAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTAATGAATGTGGCACTTaGCCTTCCACCGATTCACTA +
Preference number: 4 (lower is better)
Translates to: KTNFNLEENQEQGDWQPTNECGT*PSTDSL
Trigger: TAGTGAATCGGTGGAAGGGCAAGTGCCACATTCATT...AGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCATTCACTACAGAGCATaGGTTCTGAGGGATAGAAAC +
Preference number: 4 (lower is better)
Translates to: KLQSRGEPRAGRLAANYSIHYRA*VLRDRN
Trigger: GTTTCTATCCCTCAGAACCCATGCTCTGTAGTGAAT...GGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTCTATCAAGGCATCATTaGCATCAGAACAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPQSENNTRDQHPKELTSLSRHH*HQNSQL
Trigger: CAGCTGACTGTTCTGATGCCAATGATGCCTTGATAG...AGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAGCATGGACAGTGCTTTaGCTTCGGTGCCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: YLLKGFWECNSQHHNQKIAWTVL*LRCPEV
Trigger: TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGC...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAAGATCCGTAAACATAGGGAAGTGTTaGTCTTTGGTCATATTCACC +
Preference number: 4 (lower is better)
Translates to: KPQTKTRRNEHPEVGRSVNIGKC*SLVIFT
Trigger: GGTGAATATGACCAAAGACCAACACTTCCCTATGTT...TACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATTGGAAGTGGGCCAACTaGATCAAAGCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENWKWAN*IKAWSQ
Trigger: CTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCA...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
3UTR CAA 72 bp GTGCCTCTTCCTGTACAGTTCTTTCCAATCTGTGTCTaGAACTCTGACAGTATTGTCTCGAAAATCACGCAG +
Preference number: 4 (lower is better)
Translates to: VPLPVQFFPICV*NSDSIVSKITQ
Trigger: CTGCGTGATTTTCGAGACAATACTGTCAGAGTTCAAGACACAGATTGGAAAGAACTGTACAGGAAGAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CAGCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGAGAAACAATCCCATATaGAGCCAAGGTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QHQKTNFNLEENQEQGDWRNNPI*SQGLFI
Trigger: GATGAAGAGACCTTGGCTTCATATGGGATTGTTTCT...CCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000397426.5
CDS-3UTR TCA 90 bp GGAGCTCCAGAAATGAAATTACAAATCAATCACATGAATGACAGCCGGCCATCATGCCTGTCCTTGGAATaGATCACTTGGTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: GAPEMKLQINHMNDSRPSCLSLE*ITWLFI
Trigger: GATGAACAACCAAGTGATTCATTCCAAGGACAGGCA...TGATGGCCGGCTGTCATTCATGTGATTGATTTGTAATTTCATTTCTGGAGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
CDS-3UTR TCA 90 bp CTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACGAACAGTCAGCTGATTaGTACAAGGTCTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: LGVQLSTPQSENNTRDQHEQSAD*YKVSNE
Trigger: TTCATTAGAGACCTTGTATCAATCAGCTGACTGTTC...GTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTG +
Preference number: 4 (lower is better)
Translates to: KLQSRGEPRAGRLAANYSRRESF*RSLYML
Trigger: CAACATATACAAAGATCTTCAGAAACTCTCTCGCCT...GGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTG +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKERRESF*RSLYML
Trigger: CAACATATACAAAGATCTTCAGAAACTCTCTCGCCT...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGCTGTGTCTTGAACTCTaGCAGTATTGTCTCGAAAAT +
Preference number: 4 (lower is better)
Translates to: QLSTPQSENNTRDQHPKELCLEL*QYCLEN
Trigger: ATTTTCGAGACAATACTGTCAGAGTTCAAGACACAG...CTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CCTGACTCCAACATGAGAAGATGTATCAACACTATCAAGGCATCATTGGCATCAGTGGCCAAAGAGGGTTaGTCATTATTCTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PDSNMRRCINTIKASLASVAKEG*SLFWSE
Trigger: TTCACTCCAGAATAATGAGCAACCCTCTTTGGCCAC...TGATGCCAATGATGCCTTGATAGTGTTGATACATCTTCTCATGTTGGAGTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
CDS-3UTR GCA 90 bp ATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAAGAGGATGCATGTACTaGAGCTTATACACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: MYLLKGFWECNSQHHNQKRGCMY*SLYTPL
Trigger: GAGCGGGGTGTATAAGCTGCAGTACATGCATCCTCT...TTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACGGTTGCTCATTATTCTaGAGTGAAGAATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LGVQLSTPQSENNTRDQHGCSLF*SEECSE
Trigger: TTCAGAGCATTCTTCACTCCAGAATAATGAGCAACC...GTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAATCTGATTGGAGCTGGTaGCCAAAGAGGGTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: NVSLKRFLGVQLSTPQSESDWSW*PKRVAH
Trigger: ATGAGCAACCCTCTTTGGCCACCAGCTCCAATCAGA...TTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TTTTCTTTGTATGTGCCTCTTCCTGTACAGTTCTTTCCAATCTGTGTCTTGAACTCTGATTGGAGCTGGTaGCCAAAGAGGGTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FSLYVPLPVQFFPICVLNSDWSW*PKRVAH
Trigger: ATGAGCAACCCTCTTTGGCCACCAGCTCCAATCAGA...GTTCAAGACACAGATTGGAAAGAACTGTACAGGAAGAGGCACATACAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425028.5
CDS-3UTR CCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACATGGGATAGAATGGAATaGTGTGAGTTGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTWDRME*CELTMA
Trigger: TGCCATCGTCAACTCACACCATTCCATTCTATCCCA...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATATGGAAGTGGGCCAACTaGATCAAAGCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: YLLKGFWECNSQHHNQKIWKWAN*IKAWSQ
Trigger: CTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCA...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTCTCTTAAAAGGTTTCTaGGAGTGCAACTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: TPQSENNTRDQHPKELTSLLKGF*ECNSQH
Trigger: GTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAG...AGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATCAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAG +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENQEQGD*QPTIPK
Trigger: CTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTG...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TTTTCTTTGTATGTGCCTCTTCCTGTACAGTTCTTTCCAATCTGTGTCTTGAACCAAGAGCAGGGAGATTaGCAGCCAACTATTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FSLYVPLPVQFFPICVLNQEQGD*QPTIPK
Trigger: CTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTG...GTTCAAGACACAGATTGGAAAGAACTGTACAGGAAGAGGCACATACAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGAACCTGACTCCAACATaGGAAGATGTATCAACACTA +
Preference number: 4 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQNLTPT*EDVSTL
Trigger: TAGTGTTGATACATCTTCTCATGTTGGAGTCAGGTT...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp ACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTG +
Preference number: 4 (lower is better)
Translates to: TPQSENNTRDQHPKELTSRRESF*RSLYML
Trigger: CAACATATACAAAGATCTTCAGAAACTCTCTCGCCT...AGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAAGGACCAGGAATGAGTaGACTGATTGGGTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: YLLKGFWECNSQHHNQKIRTRNE*TDWVSN
Trigger: GTTGGAGACCCAATCAGTTCACTCATTCCTGGTCCT...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp ACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGATTCTGGTAGCAGCTaGAATCTTTTCACACTTCTA +
Preference number: 4 (lower is better)
Translates to: TPQSENNTRDQHPKELTSDSGSS*NLFTLL
Trigger: TAGAAGTGTGAAAAGATTGCAGCTGCTACCAGAATC...AGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGTCTTTTCTTTGTATGTaGCTCTTCCTGTACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSTPQSENNTRDQHPKELSFLCM*LFLYSS
Trigger: AGAACTGTACAGGAAGAGGCACATACAAAGAAAAGA...CAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGGTTGCTCATTATTCTaGAGTGAAGAATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PQSENNTRDQHPKELTSVGCSLF*SEECSE
Trigger: TTCAGAGCATTCTTCACTCCAGAATAATGAGCAACC...TACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAATTCACTACAGAGCATaGGTTCTGAGGGATAGAAAC +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTIHYRA*VLRDRN
Trigger: GTTTCTATCCCTCAGAACCCATGCTCTGTAGTGAAT...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAAATCAATCACATGAATaGCAGCCGGCCATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: YLLKGFWECNSQHHNQKINQSHE*QPAISW
Trigger: CCAACTGATGGCCGGCTGTCATTCATGTGATTGATT...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATTACAAATCAATCACATaGATGACAGCCGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENYKSIT*MTAGHQ
Trigger: CTGATGGCCGGCTGTCATTCATGTGATTGATTTGTA...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACATTCTGGAGTGAAGAATaGTCTGAATCTGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: HSRSAPQGVDICSLETKTFWSEE*SESVDE
Trigger: TTCATCCACAGATTCAGAGCATTCTTCACTCCAGAA...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000397426.5
CDS-3UTR GCA 90 bp CCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTATCTTTTCTTTGTATGTaGCTCTTCCTGTACAGTTCT +
Preference number: 4 (lower is better)
Translates to: PQSENNTRDQHPKELTSVSFLCM*LFLYSS
Trigger: AGAACTGTACAGGAAGAGGCACATACAAAGAAAAGA...TACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTAGGTATATTAGGCGCTaGAATGTCATCTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: KTNFNLEENQEQGDWQPTRYIRR*NVILKN
Trigger: ATTCTTCAAGATGACATTCCAGCGCCTAATATACCT...AGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000397426.5
CDS-3UTR CCA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGAGGTATATTAGGCGCTaGAATGTCATCTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQRYIRR*NVILKN
Trigger: ATTCTTCAAGATGACATTCCAGCGCCTAATATACCT...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266087.12
ENST00000397426.5
CDS-3UTR CCA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATATGGGCTGCCTGTCCTTaGAATGAATCACTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: YLLKGFWECNSQHHNQKIWAACP*NESLGC
Trigger: ACAACCAAGTGATTCATTCCAAGGACAGGCAGCCCA...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCGATCTTTGTATATGTTaGCTACATTTTCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: KLQSRGEPRAGRLAANYSDLCIC*LHFPLV
Trigger: AACTAGGGGAAAATGTAGCCAACATATACAAAGATC...GGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp AATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAATGGGATAGAATGGAATaGTGTGAGTTGACGATGGCA +
Preference number: 4 (lower is better)
Translates to: NVSLKRFLGVQLSTPQSEWDRME*CELTMA
Trigger: TGCCATCGTCAACTCACACCATTCCATTCTATCCCA...TTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp CAGCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGGATCTTTGTATATGTTaGCTACATTTTCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: QHQKTNFNLEENQEQGDWDLCIC*LHFPLV
Trigger: AACTAGGGGAAAATGTAGCCAACATATACAAAGATC...CCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR TCA 90 bp AATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAATCAGCTTCAAAATTTTaGCTAGGCCCTAACATACTG +
Preference number: 4 (lower is better)
Translates to: NVSLKRFLGVQLSTPQSESASKF*LGPNIL
Trigger: CAGTATGTTAGGGCCTAGTCAAAATTTTGAAGCTGA...TTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATGATTCTGGTAGCAGCTaGAATCTTTTCACACTTCTA +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENDSGSS*NLFTLL
Trigger: TAGAAGTGTGAAAAGATTGCAGCTGCTACCAGAATC...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp ATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAAACATAGGGAAGTGTTaGTCTTTGGTCATATTCACC +
Preference number: 4 (lower is better)
Translates to: MYLLKGFWECNSQHHNQKNIGKC*SLVIFT
Trigger: GGTGAATATGACCAAAGACCAACACTTCCCTATGTT...TTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATACTCTTAAAAGGTTTCTaGGAGTGCAACTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: YLLKGFWECNSQHHNQKILLKGF*ECNSQH
Trigger: GTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAG...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR GCA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATTCTTTTCTTTGTATGTaGCTCTTCCTGTACAGTTCT +
Preference number: 4 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENSFLCM*LFLYSS
Trigger: AGAACTGTACAGGAAGAGGCACATACAAAGAAAAGA...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CCA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAGATCTTTGTATATGTTaGCTACATTTTCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: YLLKGFWECNSQHHNQKIDLCIC*LHFPLV
Trigger: AACTAGGGGAAAATGTAGCCAACATATACAAAGATC...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS GCA 90 bp CTCCAGGAGCCGGACCCCAGCCGACCACCCGCGCTTCCCGTCGCCTaGACCCTCCGGCTCCGCGACGCCCGGAAGAGCCCGGGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: LQEPDPSRPPALPVA*TLRLRDARKSPGLP
Trigger: CGGGAGGCCCGGGCTCTTCCGGGCGTCGCGGAGCCGGAGGGTGCAGGCGACGGGAAGCGCGGGTGGTCGGCTGGGGTCCGGCTCCTGGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397426.5
ENST00000452138.3
CDS TCA 90 bp CCTCCAGCGGCCAGGTCCGCTTCAGAAGCCGCACCCGCAGCCTCATaGCGGCGGCAGGCGGCCCGAGGGGCCTGGACCCGGAAGCGGCGA +
Preference number: 5 (lower is better)
Translates to: PPAARSASEAAPAAS*RRQAARGAWTRKRR
Trigger: TCGCCGCTTCCGGGTCCAGGCCCCTCGGGCCGCCTGCCGCCGTCATGAGGCTGCGGGTGCGGCTTCTGAAGCGGACCTGGCCGCTGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
CDS GCA 90 bp TACCCCCAGGTGCACAGCAGGGACTGCCTCAGGTGCGAGCGCAAATaGCCCAGCGTCGGCTCCGTCTCGGGCACCTCCAGCGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: YPQVHSRDCLRCERK*PSVGSVSGTSSGQV
Trigger: GACCTGGCCGCTGGAGGTGCCCGAGACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCACCTGGGGGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
ENST00000492535.1
CDS GCA 90 bp GTATTAGAACTGTACCCCCAGGTGCACAGCAGGGACTGCCTCAGGTaGGAGCGCAAATGCCCCAGCGTCGGCTCCGTCTCGGGCACCTCC +
Preference number: 5 (lower is better)
Translates to: VLELYPQVHSRDCLR*ERKCPSVGSVSGTS
Trigger: GGAGGTGCCCGAGACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAGTTCTAATAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266087.12
CDS GCA 90 bp GTGAAGAATGCTCTGAATCTGTACCCCCAGGTGCACAGCAGGGACTaGCTCAGGTGCGAGCGCAAATGCCCCAGCGTCGGCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: VKNALNLYPQVHSRD*LRCERKCPSVGSVS
Trigger: CGAGACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAGATTCAGAGCATTCTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425028.5
ENST00000492535.1
CDS GCA 90 bp GTAAATCGGGTATTAGAACTGTACCCCCAGGTGCACAGCAGGGACTaGCTCAGGTGCGAGCGCAAATGCCCCAGCGTCGGCTCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: VNRVLELYPQVHSRD*LRCERKCPSVGSVS
Trigger: CGAGACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAGTTCTAATACCCGATTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266087.12
CDS-3UTR CAA 90 bp CTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACACAGCCGGCCATCAGTaGGCCGACCCCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LEENQEQGDWQPTIPKANTAGHQ*ADPCWV
Trigger: GACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGT...GTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp ATGTACTGCAGCTTATACACCCCGCTCAACTTCCACTTCTCCGGCATGGACAGTACAGCCGGCCATCAGTaGGCCGACCCCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: MYCSLYTPLNFHFSGMDSTAGHQ*ADPCWV
Trigger: GACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGT...ACTGTCCATGCCGGAGAAGTGGAAGTTGAGCGGGGTGTATAAGCTGCAGTACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp GATGGCAGGAGCATCACAAACCGCCCTTTCGGGGATTCTTTTCTTTGTATGTGCACAGCCGGCCATCAGTaGGCCGACCCCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: DGRSITNRPFGDSFLCMCTAGHQ*ADPCWV
Trigger: GACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGT...GCACATACAAAGAAAAGAATCCCCGAAAGGGCGGTTTGTGATGCTCCTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS TCA 90 bp CTTTTCGGCGGCGAAGTCCAAGCGCTCACCGCGGTGCTCGGCGCATaGACACAACAGAATCTAAAATTGTTGCCGCTTCACAGCAGCGAT +
Preference number: 5 (lower is better)
Translates to: LFGGEVQALTAVLGA*TQQNLKLLPLHSSD
Trigger: ATCGCTGCTGTGAAGCGGCAACAATTTTAGATTCTGTTGTGTTCATGCGCCGAGCACCGCGGTGAGCGCTTGGACTTCGCCGCCGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444207.1
CDS-3UTR CAA 90 bp GGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGGGGAAGTGTTGGTCTTaGGTCATATTCACCCCCGAT +
Preference number: 5 (lower is better)
Translates to: GVRSWKWANWIKAWSQWRGKCWS*VIFTPD
Trigger: ATCGGGGGTGAATATGACCAAAGACCAACACTTCCC...CCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp GATGGCAGGAGCATCACAAACCGCCCTTTCGGGGATTCTTTTCTTTGTATGTGCAAGGGAAATCTGTCATaGGGGCCGCCTCGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: DGRSITNRPFGDSFLCMCKGNLS*GPPRPG
Trigger: GCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTT...GCACATACAAAGAAAAGAATCCCCGAAAGGGCGGTTTGTGATGCTCCTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp AAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCACAGCCGGCCATCAGTaGGCCGACCCCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: KLQSRGEPRAGRLAANYSTAGHQ*ADPCWV
Trigger: GACCCAGCAGGGGTCGGCCAACTGATGGCCGGCTGT...GGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp TCAACTTCCACTTCTCCGGCATGGACAGTGCTTTGGCTTCGGTGCCCTGAGGTACCAAGAGCAGGGAGATaGGCAGCCAACTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: STSTSPAWTVLWLRCPEVPRAGR*AANYSQ
Trigger: TTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGG...TACCTCAGGGCACCGAAGCCAAAGCACTGTCCATGCCGGAGAAGTGGAAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAATGGCCTAGGGTGCAAGGGCTTGGAATGAATCACTaGGTTGTTCATCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: PDNSWRKAGARKWPRVQGLGMNH*VVHPAC
Trigger: GCATGCAGGATGAACAACCAAGTGATTCATTCCAAG...CCCTTGCACCCTAGGCCATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425028.5
CDS-3UTR CAA 90 bp GTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGAAGGGAAATCTGTCATaGGGGCCGCCTCGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: VQLSTPQSENNTRDQHPKKGNLS*GPPRPG
Trigger: GCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTT...CTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACATGGAATGGTGTGAGTaGACGATGGCAGGAGCATCA +
Preference number: 5 (lower is better)
Translates to: LEENQEQGDWQPTIPKANMEWCE*TMAGAS
Trigger: TGATGCTCCTGCCATCGTCAACTCACACCATTCCAT...GTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp AGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTGGGAAGTGTTGGTCTTaGGTCATATTCACCCCCGAT +
Preference number: 5 (lower is better)
Translates to: RGEPRAGRLAANYSQGQPGKCWS*VIFTPD
Trigger: ATCGGGGGTGAATATGACCAAAGACCAACACTTCCC...AGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp TCTTTGGTCATATTCACCCCCGATAATTCCTGGAGGAAGGCGGGAGCTAGGAAAGTCACAGAGGAACCTTaGGGTCATACCACCCCTAGG +
Preference number: 5 (lower is better)
Translates to: SLVIFTPDNSWRKAGARKVTEEP*GHTTPR
Trigger: CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGAC...TTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTGAATATGACCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp TCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAAATGGAATGGTGTGAGTaGACGATGGCAGGAGCATCA +
Preference number: 5 (lower is better)
Translates to: SRGEPRAGRLAANYSQGQMEWCE*TMAGAS
Trigger: TGATGCTCCTGCCATCGTCAACTCACACCATTCCAT...TTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAAAGGGAAATCTGTCATaGGGGCCGCCTCGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: HSRSAPQGVDICSLETKTKGNLS*GPPRPG
Trigger: GCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTT...TGTTTTTGTTTCTAAACTACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp GGAGCTCCAGAAATGAAATTACAAATCAATCACATGAATGACAGCCGGCCATCAAAGGGAAATCTGTCATaGGGGCCGCCTCGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GAPEMKLQINHMNDSRPSKGNLS*GPPRPG
Trigger: GCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTT...TGATGGCCGGCTGTCATTCATGTGATTGATTTGTAATTTCATTTCTGGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CGATGGCAGGAGCATCACAAACCGCCCTTTCGGGGATTCTTTTCTTTGTATGTGCCAAGAGCAGGGAGATaGGCAGCCAACTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: RWQEHHKPPFRGFFSLYVPRAGR*AANYSQ
Trigger: TTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGG...CACATACAAAGAAAAGAATCCCCGAAAGGGCGGTTTGTGATGCTCCTGCCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS TCA 90 bp GTCACCACACTGCTACTCAACATGTGGGCGACAGATCACCAGAACTaGCAATACCTGGAACTGTTTAGAACTACTGAATCTCAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: VTTLLLNMWATDHQN*QYLELFRTTESQAP
Trigger: GGGGGCCTGAGATTCAGTAGTTCTAAACAGTTCCAGGTATTGTCAGTTCTGGTGATCTGTCGCCCACATGTTGAGTAGCAGTGTGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS CCA 90 bp GGGCCACTGGCACTCCTTTCCTTCTACTACAAGAGGAGCATGTCCTaGATAAAGACAACTCCTTCAGCCAAAGCAAACCCACACACAACA +
Preference number: 5 (lower is better)
Translates to: GPLALLSFYYKRSMS*IKTTPSAKANPHTT
Trigger: TGTTGTGTGTGGGTTTGCTTTGGCTGAAGGAGTTGTCTTTATCCAGGACATGCTCCTCTTGTAGTAGAAGGAAAGGAGTGCCAGTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS-3UTR CAA 90 bp AGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTCTTGGAATGAATCACTaGGTTGTTCATCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: RGEPRAGRLAANYSQGQPLGMNH*VVHPAC
Trigger: GCATGCAGGATGAACAACCAAGTGATTCATTCCAAG...AGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CCCTGGCAAGATGGGGTTAGGTCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGAGATCTTTGTATATGTaGGCTACATTTTCCCCTAGT +
Preference number: 5 (lower is better)
Translates to: PWQDGVRSWKWANWIKAWRSLYM*ATFSPS
Trigger: ACTAGGGGAAAATGTAGCCAACATATACAAAGATCT...CCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCCATCTTGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS CCA 90 bp TGCTACTCAACATGTGGGCGACAGATCACCAGAACTGACAATACCTaGAACTGTTTAGAACTACTGAATCTCAGGCCCCCACAGACCTAC +
Preference number: 5 (lower is better)
Translates to: CYSTCGRQITRTDNT*NCLELLNLRPPQTY
Trigger: GTAGGTCTGTGGGGGCCTGAGATTCAGTAGTTCTAAACAGTTCCAGGTATTGTCAGTTCTGGTGATCTGTCGCCCACATGTTGAGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS-3UTR CAA 90 bp AGTCGGAAGATCCGTAGTTTCAGTTCCAATGGGAGGACGACCAACCCAAATACAGGGAAGTGTTGGTCTTaGGTCATATTCACCCCCGAT +
Preference number: 5 (lower is better)
Translates to: SRKIRSFSSNGRTTNPNTGKCWS*VIFTPD
Trigger: ATCGGGGGTGAATATGACCAAAGACCAACACTTCCC...TGTATTTGGGTTGGTCGTCCTCCCATTGGAACTGAAACTACGGATCTTCCGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp GCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGTCACAGAGGAACCTTaGGGTCATACCACCCCTAGG +
Preference number: 5 (lower is better)
Translates to: ASENKLQSRGEPRAGRLAVTEEP*GHTTPR
Trigger: CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGAC...TGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp TCCTGGAAGTGGGCCAACTGGATCAAAGCGTGGTCTCAGTGGAGGAAACTGGCTTCCCCTAGTTTCTCTTaGCAAATAAAAGATTCTGGT +
Preference number: 5 (lower is better)
Translates to: SWKWANWIKAWSQWRKLASPSFS*QIKDSG
Trigger: ACCAGAATCTTTTATTTGCAAAGAGAAACTAGGGGA...AGCCAGTTTCCTCCACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CTGGGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACGGGAAGTGTTGGTCTTaGGTCATATTCACCCCCGAT +
Preference number: 5 (lower is better)
Translates to: LGVQLSTPQSENNTRDQHGKCWS*VIFTPD
Trigger: ATCGGGGGTGAATATGACCAAAGACCAACACTTCCC...GTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCAGCCAAGAGCAGGGAGATaGGCAGCCAACTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: HQKTNFNLEENQEQGDWQPRAGR*AANYSQ
Trigger: TTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGG...CTGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS TCA 90 bp CTGCATCCTGTGCCATCCATCCTCTCTCACTGTTCTCTATTCACATaGGCTTTCCATCCGTTCCAAAAAGCAGATCAACTTCATTGCAGC +
Preference number: 5 (lower is better)
Translates to: LHPVPSILSHCSLFT*AFHPFQKADQLHCS
Trigger: GCTGCAATGAAGTTGATCTGCTTTTTGGAACGGATGGAAAGCTCATGTGAATAGAGAACAGTGAGAGAGGATGGATGGCACAGGATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465418.1
CDS GCA 90 bp GAGCTGGTGGCCAAAGAGGGTTGCTCATTATTCTGGAGTGAAGAATaGTCTGAATCTGTGGATGAAGGTATATTAGGCGCTGGAATGTCA +
Preference number: 5 (lower is better)
Translates to: ELVAKEGCSLFWSEE*SESVDEGILGAGMS
Trigger: TGACATTCCAGCGCCTAATATACCTTCATCCACAGATTCAGAGCATTCTTCACTCCAGAATAATGAGCAACCCTCTTTGGCCACCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000444207.1
ENST00000465418.1
CDS-3UTR CAA 90 bp GGAGTGCAACTCTCAACACCACAATCAGAAAATAACACTCGAGATCAGCACCCCACTATCAAGGCATCATaGGCATCAGAACAGTCAGCT +
Preference number: 5 (lower is better)
Translates to: GVQLSTPQSENNTRDQHPTIKAS*ASEQSA
Trigger: AGCTGACTGTTCTGATGCCAATGATGCCTTGATAGT...GGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGGTGTTGAGAGTTGCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp GAGAACCAAGAGCAGGGAGATTGGCAGCCAACTATTCCCAAGGCCAACCTTGTCTCCCCTAGTTTCTCTTaGCAAATAAAAGATTCTGGT +
Preference number: 5 (lower is better)
Translates to: ENQEQGDWQPTIPKANLVSPSFS*QIKDSG
Trigger: ACCAGAATCTTTTATTTGCAAAGAGAAACTAGGGGA...GACAAGGTTGGCCTTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CACTACAGAGCATGGGTTCTGAGGGATAGAAACCTGTGCCCTCTGCCATATGCGTCCCCTAGTTTCTCTTaGCAAATAAAAGATTCTGGT +
Preference number: 5 (lower is better)
Translates to: HYRAWVLRDRNLCPLPYASPSFS*QIKDSG
Trigger: ACCAGAATCTTTTATTTGCAAAGAGAAACTAGGGGA...CGCATATGGCAGAGGGCACAGGTTTCTATCCCTCAGAACCCATGCTCTGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp ATTCCCAAGGCCAACCTTGTCACAGAGGAACCTTTGGGTCATACCACCCCTAGGAGATCTTTGTATATGTaGGCTACATTTTCCCCTAGT +
Preference number: 5 (lower is better)
Translates to: IPKANLVTEEPLGHTTPRRSLYM*ATFSPS
Trigger: ACTAGGGGAAAATGTAGCCAACATATACAAAGATCT...CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGACAAGGTTGGCCTTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp AGGTCACGACAAACCGCAGACAAAGACAAGACGGAACGAACATCCAGAAGTCGGAGATCTTTGTATATGTaGGCTACATTTTCCCCTAGT +
Preference number: 5 (lower is better)
Translates to: RSRQTADKDKTERTSRSRRSLYM*ATFSPS
Trigger: ACTAGGGGAAAATGTAGCCAACATATACAAAGATCT...CCGACTTCTGGATGTTCGTTCCGTCTTGTCTTTGTCTGCGGTTTGTCGTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp GGAGCTCCAGAAATGAAATTACAAATCAATCACATGAATGACAGCCGGCCATCAATGGAATGGTGTGAGTaGACGATGGCAGGAGCATCA +
Preference number: 5 (lower is better)
Translates to: GAPEMKLQINHMNDSRPSMEWCE*TMAGAS
Trigger: TGATGCTCCTGCCATCGTCAACTCACACCATTCCAT...TGATGGCCGGCTGTCATTCATGTGATTGATTTGTAATTTCATTTCTGGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp AATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAGTCACAGAGGAACCTTaGGGTCATACCACCCCTAGG +
Preference number: 5 (lower is better)
Translates to: NVSLKRFLGVQLSTPQSEVTEEP*GHTTPR
Trigger: CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGAC...TTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp GTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATGTCACAGAGGAACCTTaGGGTCATACCACCCCTAGG +
Preference number: 5 (lower is better)
Translates to: VSLKRFLGVQLSTPQSENVTEEP*GHTTPR
Trigger: CCTAGGGGTGGTATGACCCAAAGGTTCCTCTGTGAC...ATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp GCATCAGAAAACAAACTTCAATCTAGAGGAGAACCAAGAGCAGGGAGATTGGCACTTGGAATGAATCACTaGGTTGTTCATCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: ASENKLQSRGEPRAGRLALGMNH*VVHPAC
Trigger: GCATGCAGGATGAACAACCAAGTGATTCATTCCAAG...TGCCAATCTCCCTGCTCTTGGTTCTCCTCTAGATTGAAGTTTGTTTTCTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000425028.5
CDS-3UTR CAA 90 bp ATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAACCAAGAGCAGGGAGATaGGCAGCCAACTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: MYLLKGFWECNSQHHNQKPRAGR*AANYSQ
Trigger: TTGGGAATAGTTGGCTGCCAATCTCCCTGCTCTTGG...TTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp AATGTATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAACTATCAAGGCATCATaGGCATCAGAACAGTCAGCT +
Preference number: 5 (lower is better)
Translates to: NVSLKRFLGVQLSTPQSETIKAS*ASEQSA
Trigger: AGCTGACTGTTCTGATGCCAATGATGCCTTGATAGT...TTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS-3UTR CAA 90 bp CCACAATCAGAAAATAACACTCGAGATCAGCACCCCAAGGAGTTGACATCTGTAAGATCTTTGTATATGTaGGCTACATTTTCCCCTAGT +
Preference number: 5 (lower is better)
Translates to: PQSENNTRDQHPKELTSVRSLYM*ATFSPS
Trigger: ACTAGGGGAAAATGTAGCCAACATATACAAAGATCT...TACAGATGTCAACTCCTTGGGGTGCTGATCTCGAGTGTTATTTTCTGATTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS TCA 90 bp AGAAGAGGATACACCAGCTGGTCTTTAAAGAGGCGAGAGAGTTTCTaGAGATCTTTGTATATGTTGGCTACATTTTCCCCTAGAATATTT +
Preference number: 5 (lower is better)
Translates to: RRGYTSWSLKRRESF*RSLYMLATFSPRIF
Trigger: AAATATTCTAGGGGAAAATGTAGCCAACATATACAAAGATCTTCAGAAACTCTCTCGCCTCTTTAAAGACCAGCTGGTGTATCCTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS-3UTR CAA 90 bp TATCTCTTAAAAGGTTTCTGGGAGTGCAACTCTCAACACCACAATCAGAAAATATCCCCTAGTTTCTCTTaGCAAATAAAAGATTCTGGT +
Preference number: 5 (lower is better)
Translates to: YLLKGFWECNSQHHNQKISPSFS*QIKDSG
Trigger: ACCAGAATCTTTTATTTGCAAAGAGAAACTAGGGGA...TATTTTCTGATTGTGGTGTTGAGAGTTGCACTCCCAGAAACCTTTTAAGAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000420700.5
ENST00000425028.5
CDS GCA 72 bp CCGGACCCCAGCCGACCACCCGCGCTTCCCGTCGCCTaGACCCTCCGGCTCCGCGACGCCCGGAAGAGCCCG +
Preference number: 6 (lower is better)
Translates to: PDPSRPPALPVA*TLRLRDARKSP
Trigger: CGGGCTCTTCCGGGCGTCGCGGAGCCGGAGGGTGCAGGCGACGGGAAGCGCGGGTGGTCGGCTGGGGTCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397426.5
ENST00000452138.3
CDS CCA 72 bp AGCCCCGCCACAGTGGCCGCCCTGCCACTCGGTCTCTaGAATAGAGCGCCCGCCCCTCTCCTGAGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: SPATVAALPLGL*NRAPAPLLRAP
Trigger: AGGCGCCCTCAGGAGAGGGGCGGGCGCTCTATTCCAGAGACCGAGTGGCAGGGCGGCCACTGTGGCGGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420700.5
CDS GCA 72 bp GTGCACAGCAGGGACTGCCTCAGGTGCGAGCGCAAATaGCCCAGCGTCGGCTCCGTCTCGGGCACCTCCAGC +
Preference number: 6 (lower is better)
Translates to: VHSRDCLRCERK*PSVGSVSGTSS
Trigger: GCTGGAGGTGCCCGAGACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
ENST00000492535.1
CDS GCA 72 bp CTGTACCCCCAGGTGCACAGCAGGGACTGCCTCAGGTaGGAGCGCAAATGCCCCAGCGTCGGCTCCGTCTCG +
Preference number: 6 (lower is better)
Translates to: LYPQVHSRDCLR*ERKCPSVGSVS
Trigger: CGAGACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000420700.5
ENST00000425028.5
ENST00000492535.1
CDS GCA 72 bp GCTCTGAATCTGTACCCCCAGGTGCACAGCAGGGACTaGCTCAGGTGCGAGCGCAAATGCCCCAGCGTCGGC +
Preference number: 6 (lower is better)
Translates to: ALNLYPQVHSRD*LRCERKCPSVG
Trigger: GCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAGATTCAGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425028.5
ENST00000492535.1
CDS GCA 72 bp GTATTAGAACTGTACCCCCAGGTGCACAGCAGGGACTaGCTCAGGTGCGAGCGCAAATGCCCCAGCGTCGGC +
Preference number: 6 (lower is better)
Translates to: VLELYPQVHSRD*LRCERKCPSVG
Trigger: GCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCAGTCCCTGCTGTGCACCTGGGGGTACAGTTCTAATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266087.12
CDS TCA 72 bp GGCGAAGTCCAAGCGCTCACCGCGGTGCTCGGCGCATaGACACAACAGAATCTAAAATTGTTGCCGCTTCAC +
Preference number: 6 (lower is better)
Translates to: GEVQALTAVLGA*TQQNLKLLPLH
Trigger: GTGAAGCGGCAACAATTTTAGATTCTGTTGTGTTCATGCGCCGAGCACCGCGGTGAGCGCTTGGACTTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444207.1
CDS CCA 72 bp ACAGGTCAAGGTACAGAAAGCCTGTCCAAGGCCCCATaGTTAGTGGCAGAACAGTGCACAAACCCAAGTCCG +
Preference number: 6 (lower is better)
Translates to: TGQGTESLSKAP*LVAEQCTNPSP
Trigger: CGGACTTGGGTTTGTGCACTGTTCTGCCACTAACCATGGGGCCTTGGACAGGCTTTCTGTACCTTGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS CCA 72 bp TTGGAGCTGGTGGCCAAAGAGGGTTGCTCATTATTCTaGAGTGAAGAATGCTCTGAATCGAGGAGGGGACCA +
Preference number: 6 (lower is better)
Translates to: LELVAKEGCSLF*SEECSESRRGP
Trigger: TGGTCCCCTCCTCGATTCAGAGCATTCTTCACTCCAGAATAATGAGCAACCCTCTTTGGCCACCAGCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452138.3
CDS CCA 72 bp TTGGAGCTGGTGGCCAAAGAGGGTTGCTCATTATTCTaGAGTGAAGAATGCTCTGAATCTGTACCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: LELVAKEGCSLF*SEECSESVPPG
Trigger: ACCTGGGGGTACAGATTCAGAGCATTCTTCACTCCAGAATAATGAGCAACCCTCTTTGGCCACCAGCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425028.5
ENST00000492535.1
CDS CCA 72 bp ACATGTGGGCGACAGATCACCAGAACTGACAATACCTaGAACTGTTTAGAACTACTGAATCTCAGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: TCGRQITRTDNT*NCLELLNLRPP
Trigger: TGGGGGCCTGAGATTCAGTAGTTCTAAACAGTTCCAGGTATTGTCAGTTCTGGTGATCTGTCGCCCACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS CCA 72 bp TTGGAGCTGGTGGCCAAAGAGGGTTGCTCATTATTCTaGAGTGAAGAATGCTCTGAATCTGTGGATGAAGGT +
Preference number: 6 (lower is better)
Translates to: LELVAKEGCSLF*SEECSESVDEG
Trigger: ACCTTCATCCACAGATTCAGAGCATTCTTCACTCCAGAATAATGAGCAACCCTCTTTGGCCACCAGCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266087.12
ENST00000397426.5
ENST00000444207.1
ENST00000465418.1
CDS CCA 72 bp GCACTCCTTTCCTTCTACTACAAGAGGAGCATGTCCTaGATAAAGACAACTCCTTCAGCCAAAGCAAACCCA +
Preference number: 6 (lower is better)
Translates to: ALLSFYYKRSMS*IKTTPSAKANP
Trigger: TGGGTTTGCTTTGGCTGAAGGAGTTGTCTTTATCCAGGACATGCTCCTCTTGTAGTAGAAGGAAAGGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS CAA 90 bp ATTCACATGAGCTTTCCATCCGTTCCAAAAAGCAGATCAACTTCATaGCAGCCTTCGGGCCTCTCCGTTTGTTCTTCCAGATCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: IHMSFPSVPKSRSTS*QPSGLSVCSSRSSN
Trigger: ATTTGAAGATCTGGAAGAACAAACGGAGAGGCCCGAAGGCTGCAATGAAGTTGATCTGCTTTTTGGAACGGATGGAAAGCTCATGTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465418.1
CDS TCA 72 bp CTGCTACTCAACATGTGGGCGACAGATCACCAGAACTaGCAATACCTGGAACTGTTTAGAACTACTGAATCT +
Preference number: 6 (lower is better)
Translates to: LLLNMWATDHQN*QYLELFRTTES
Trigger: AGATTCAGTAGTTCTAAACAGTTCCAGGTATTGTCAGTTCTGGTGATCTGTCGCCCACATGTTGAGTAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS GCA 72 bp CAACAATGTCAATCTAGCCAGCCTTTCCTAAAGGACTaGTATAAATGCCATCTTCCCATTGTACCACAACAT +
Preference number: 6 (lower is better)
Translates to: QQCQSSQPFLKD*YKCHLPIVPQH
Trigger: ATGTTGTGGTACAATGGGAAGATGGCATTTATAGCAGTCCTTTAGGAAAGGCTGGCTAGATTGACATTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS CAA 72 bp TATATTTGTGGTATGAAATTTCATGAAGGAGAGAGATaGAGGGGAAAATCTCCAACGGCTCCTTTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: YICGMKFHEGER*RGKSPTAPLGS
Trigger: ACTTCCCAAAGGAGCCGTTGGAGATTTTCCCCTCAATCTCTCTCCTTCATGAAATTTCATACCACAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS CAA 90 bp AACTTGACATTGAATTACTTTCATGAAACACAGATCCCCTCCATATaGGTTAAATACCAATATGGAGATCTCAATAGGGAGATCTCCAAA +
Preference number: 6 (lower is better)
Translates to: NLTLNYFHETQIPSI*VKYQYGDLNREISK
Trigger: TTTGGAGATCTCCCTATTGAGATCTCCATATTGGTATTTAACCAATATGGAGGGGATCTGTGTTTCATGAAAGTAATTCAATGTCAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS CCA 72 bp TATATTCCCTACCTTCAAGGTATTCCCAACCTTAGGTaGAAAGAAATCATATCAACAATTATAGTCCATGGA +
Preference number: 6 (lower is better)
Translates to: YIPYLQGIPNLR*KEIISTIIVHG
Trigger: TCCATGGACTATAATTGTTGATATGATTTCTTTCCACCTAAGGTTGGGAATACCTTGAAGGTAGGGAATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492535.1
CDS CAA 72 bp TTGAATTACTTTCATGAAACACAGATCCCCTCCATATaGGTTAAATACCAATATGGAGATCTCAATAGGGAG +
Preference number: 6 (lower is better)
Translates to: LNYFHETQIPSI*VKYQYGDLNRE
Trigger: CTCCCTATTGAGATCTCCATATTGGTATTTAACCAATATGGAGGGGATCTGTGTTTCATGAAAGTAATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492535.1