Pregenerated sensors for FBXO48 (Homo sapiens)
Ensembl gene IDs: ENSG00000204923Ensembl transcript IDs: ENST00000377957.4
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACAGGCTGGAGAGGTAGGCCAGACCACATCATTAAAGGCCCTATaGGCTTTAGTGGGGAATTTTGATTTCTACCTGTATGCAGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: EQAGEVGQTTSLKAL*ALVGNFDFYLYAVR Trigger: CCTGACTGCATACAGGTAGAAATCAAAATTCCCCACTAAAGCCCATAGGGCCTTTAATGATGTGGTCTGGCCTACCTCTCCAGCCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR TCA 90 bp | GAGGTGGTCTTCAGTGCAAGCCTAGACTACAACTGGACTGTTCTGTaGCATAACAGAGATGCTATTAGTAGAAGTACAGGATTTCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: EVVFSASLDYNWTVL*HNRDAISRSTGFQL Trigger: AAGCTGAAATCCTGTACTTCTACTAATAGCATCTCTGTTATGTCACAGAACAGTCCAGTTGTAGTCTAGGCTTGCACTGAAGACCACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR CCA 90 bp | ATGTTGTTGGGTCTAGAAATTATACTCTATGATCATCAGTGGAATTaGAGAGAAGACATAGGAAGAGACAGGCTATCAGTCTTCAAATAT | + |
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Preference number: 1 (lower is better) Translates to: MLLGLEIILYDHQWN*REDIGRDRLSVFKY Trigger: ATATTTGAAGACTGATAGCCTGTCTCTTCCTATGTCTTCTCTCCAATTCCACTGATGATCATAGAGTATAATTTCTAGACCCAACAACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCAGGCTGGAGCGCAGTaGCGTGATCTCTGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQQAGAQ*RDLCSL Trigger: CAGTGAGCAGAGATCACGCCACTGCGCTCCAGCCTG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGACTGCGGACTGCAGTaGCGCAATCTCGGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQDCGLQ*RNLGSL Trigger: CAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGGCTGCTCGGGAGGCTaGCACAGAGAGTTGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQGCSGG*HRELLE Trigger: TTCAAGCAACTCTCTGTGTCAGCCTCCCGAGCAGCC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGACTTCTGACCTGAGGTaGTCCACCCACCTTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQTSDLR*STHLGL Trigger: GAGACCAAGGTGGGTGGATCACCTCAGGTCAGAAGT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGTGATCTCTGCTCACTaGAACCTCTGCCTGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQVISAH*NLCLPG Trigger: ACCTGGCAGGCAGAGGTTGCAGTGAGCAGAGATCAC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAGGTGGAGGTTGCAGTaGGCCAAGATCATGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQRWRLQ*AKIMPL Trigger: CAGTGGCATGATCTTGGCCCACTGCAACCTCCACCT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGACACAGAGAGTTGCTTaGACCTGGGAGGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQTQRVA*TWEVEV Trigger: AACCTCCACCTCCCAGGTTCAAGCAACTCTCTGTGT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGCTGACACAGAGAGTTaGTTGAACCTGGGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQADTES*LNLGGG Trigger: TCCACCTCCCAGGTTCAAGCAACTCTCTGTGTCAGC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTCAGGCCTCTTTCCCTaGAATTGTTCTTTCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQSGLFP*NCSFPW Trigger: CCAGGGGAAAGAACAATTGCAGGGAAAGAGGCCTGA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAAAATTAGCTGGGCATaGTGGCGGGCGCCTATAATC | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQKISWA*WRAPII Trigger: GATTATAGGCGCCCGCCACCATGCCCAGCTAATTTT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGCTGGGACCAGGGTCTaGAATATAATCAGGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQAGTRV*NIIRPL Trigger: AAGAGGCCTGATTATATTCCAGACCCTGGTCCCAGC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCTTACTTTCAGCTCCTaGGAGCCGTTCCAGGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQLTFSS*EPFQVY Trigger: ATAAACCTGGAACGGCTCTCAGGAGCTGAAAGTAAG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGGACACTTGACTGCCTaGTTTTCAAGGACTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQGHLTA*FSRTLP Trigger: TGGAAGAGTCCTTGAAAATCAGGCAGTCAAGTGTCC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAGAGGTGGTCTTCAGTaGAAGCCTAGACTACAACTG | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQRGGLQ*KPRLQL Trigger: CAGTTGTAGTCTAGGCTTGCACTGAAGACCACCTCT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTCATGTTTCCATCCTTaGACTAAACACGGAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQSCFHP*TKHGGW Trigger: CCAGCCTCCGTGTTTAGTCCAAGGATGGAAACATGA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCAGATAAGGAATGGCTaGGACCAGGGTCTGGAATAT | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQQIRNG*DQGLEY Trigger: ATATTCCAGACCCTGGTCCCAGCCATTCCTTATCTG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTGTTCTTTCCCCTGGTaGCTCCACATTCTCTTACTT | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQCSFPW*LHILLL Trigger: AAGTAAGAGAATGTGGAGCCACCAGGGGAAAGAACA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTTTACCAGGCTAGTGTaGCATTCTGATGGTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQFTRLV*HSDGKV Trigger: CACTTTACCATCAGAATGCCACACTAGCCTGGTAAA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTCCGTTTTCTTTGTGTaGCAGGGAACAGTTTCATCA | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQSVFFV*QGTVSS Trigger: TGATGAAACTGTTCCCTGCCACACAAAGAAAACGGA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAATTGTTCTTTCCCCTaGTGGCTCCACATTCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQNCSFP*WLHILL Trigger: TAAGAGAATGTGGAGCCACCAGGGGAAAGAACAATT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAATGGGAATCTCAATTaGACAAACTTTAGCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQNGNLN*TNFSPE Trigger: CTCAGGGCTAAAGTTTGTCCAATTGAGATTCCCATT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGATCATCAGTGGAATTaGAGAGAAGACATAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQDHQWN*REDIGR Trigger: TCTTCCTATGTCTTCTCTCCAATTCCACTGATGATC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGACTAAACACGGAGGCTaGGAAAAACAGGATAATGTA | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQTKHGG*EKQDNV Trigger: TACATTATCCTGTTTTTCCCAGCCTCCGTGTTTAGT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR CAA 90 bp | TGTGACATAACAGAGATGCTATTAGTAGAAGTACAGGATTTCAGCTaGGGCTGGCTGACTGACAGTGTTCCTATTGAGAAAATTACTGAA | + |
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Preference number: 2 (lower is better) Translates to: CDITEMLLVEVQDFS*GWLTDSVPIEKITE Trigger: TTCAGTAATTTTCTCAATAGGAACACTGTCAGTCAGCCAGCCCAAGCTGAAATCCTGTACTTCTACTAATAGCATCTCTGTTATGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCTCTATGATCATCAGTaGAATTGGAGAGAAGACATA | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQLYDHQ*NWREDI Trigger: TATGTCTTCTCTCCAATTCCACTGATGATCATAGAG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGATGGTAAAGTGTTCTaGAAACTTTCCACTTACTTT | + |
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Preference number: 2 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQDGKVF*KLSTYF Trigger: AAAGTAAGTGGAAAGTTTCCAGAACACTTTACCATC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR CAA 90 bp | AGCCCCTTTCTTTTGTTAAGAGTAAATGGGCAGAAGAGAATGTTGTaGGGTCTAGAAATTATACTCTATGATCATCAGTGGAATTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SPFLLLRVNGQKRML*GLEIILYDHQWNWR Trigger: TCTCCAATTCCACTGATGATCATAGAGTATAATTTCTAGACCCAACAACATTCTCTTCTGCCCATTTACTCTTAACAAAAGAAAGGGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR GCA 72 bp | CGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTaGAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: RTADCSGAISAH*KLRLPGSRHSP Trigger: AGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR TCA 72 bp | GTGGCGGGCGCCTATAATCCTGGCTGCTCGGGAGGCTaGCACAGAGAGTTGCTTGAACCTGGGAGGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: VAGAYNPGCSGG*HRELLEPGRWR Trigger: CCTCCACCTCCCAGGTTCAAGCAACTCTCTGTGTCAGCCTCCCGAGCAGCCAGGATTATAGGCGCCCGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCCTGGGAGGTGGAGGTaGCAGTGGGCCAAGATCATG | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQPGRWR*QWAKIM Trigger: CATGATCTTGGCCCACTGCAACCTCCACCTCCCAGG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGACACAGAGAGTTGCTaGAACCTGGGAGGTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQDTESC*NLGGGG Trigger: ACCTCCACCTCCCAGGTTCAAGCAACTCTCTGTGTC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCCTCTTTCCCTGCAATaGTTCTTTCCCCTGGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQPLSLQ*FFPLVA Trigger: AGCCACCAGGGGAAAGAACAATTGCAGGGAAAGAGG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR TCA 72 bp | ACGGACATAGACGGCATTAGCACCAACAATGGTAGCTaGCATAGGAGTTGTAGATGGGATCACCAAGGATGT | + |
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Preference number: 3 (lower is better) Translates to: TDIDGISTNNGS*HRSCRWDHQGC Trigger: ACATCCTTGGTGATCCCATCTACAACTCCTATGTCAGCTACCATTGTTGGTGCTAATGCCGTCTATGTCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAAACCACACACTTGGTaGGAAGTGAGAAGGGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQKPHTW*EVRRVS Trigger: ACTCACCCTTCTCACTTCCAACCAAGTGTGTGGTTT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCACAGCCCCTTTCTTTaGTTAAGAGTAAATGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQHSPFL*LRVNGQ Trigger: CTGCCCATTTACTCTTAACAAAAGAAAGGGGCTGTG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCAAGATCCGTTTTCTTaGTGTGGCAGGGAACAGTTT | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQQDPFS*CGREQF Trigger: AAACTGTTCCCTGCCACACAAAGAAAACGGATCTTG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR TCA 72 bp | TTCAGTGCAAGCCTAGACTACAACTGGACTGTTCTGTaGCATAACAGAGATGCTATTAGTAGAAGTACAGGA | + |
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Preference number: 3 (lower is better) Translates to: FSASLDYNWTVL*HNRDAISRSTG Trigger: TCCTGTACTTCTACTAATAGCATCTCTGTTATGTCACAGAACAGTCCAGTTGTAGTCTAGGCTTGCACTGAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR CCA 72 bp | CATGGCGCACAGCCCCTTTCTTTTGTTAAGAGTAAATaGGCAGAAGAGAATGTTGTTGGGTCTAGAAATTAT | + |
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Preference number: 3 (lower is better) Translates to: HGAQPLSFVKSK*AEENVVGSRNY Trigger: ATAATTTCTAGACCCAACAACATTCTCTTCTGCCCATTTACTCTTAACAAAAGAAAGGGGCTGTGCGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR CCA 72 bp | ACATATTTGAAAAATGGGCAACGAAACCACATCAGGTaGGGGTCCCAGTATGATGGTGAAACTCAATTTGAA | + |
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Preference number: 3 (lower is better) Translates to: TYLKNGQRNHIR*GSQYDGETQFE Trigger: TTCAAATTGAGTTTCACCATCATACTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGGAGCTGAAAGTCCTTaGTCTTGCTATCTAAGAATA | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQGAESP*SCYLRI Trigger: TATTCTTAGATAGCAAGACAAAGGACTTTCAGCTCC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGGGCAGAAGAGAATGTaGTTGGGTCTAGAAATTATA | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQGQKRM*LGLEII Trigger: TATAATTTCTAGACCCAACAACATTCTCTTCTGCCC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTTCAACATACAGAATTaGCATATAGTGGGGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQFNIQN*HIVGHL Trigger: AAGATGCCCCACTATATGCAAATTCTGTATGTTGAA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR TCA 72 bp | GAAGAGAATGTTGTTGGGTCTAGAAATTATACTCTATaGTCATCAGTGGAATTGGAGAGAAGACATAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: EENVVGSRNYTL*SSVELERRHRK Trigger: CTTCCTATGTCTTCTCTCCAATTCCACTGATGATCATAGAGTATAATTTCTAGACCCAACAACATTCTCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR TCA 72 bp | TGTAATTTGGATACCAACAGTTTCAACCATATGGAGTaGTGGCCATATTATAGCAGATTAAGACTGACTGGT | + |
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Preference number: 3 (lower is better) Translates to: CNLDTNSFNHME*WPYYSRLRLTG Trigger: ACCAGTCAGTCTTAATCTGCTATAATATGGCCATCACTCCATATGGTTGAAACTGTTGGTATCCAAATTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR CCA 72 bp | TTTACAATAGATTTTTGCCAAGAAAAGAATCAATGGTaGGGATTACTCCAGGTATATCAAACAGCCTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: FTIDFCQEKNQW*GLLQVYQTACA Trigger: TGCACAGGCTGTTTGATATACCTGGAGTAATCCCCACCATTGATTCTTTTCTTGGCAAAAATCTATTGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGGTGGCTCCCATTCATaGTCCAGATTAGCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQGGSHS*SRLAVV Trigger: CACCACAGCTAATCTGGATCATGAATGGGAGCCACC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCTATGTTTTCGGACTTaGCAAGACCACGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQLCFRT*QDHGGS Trigger: GGAGCCACCGTGGTCTTGGCAAGTCCGAAAACATAG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTTGCCAAGACCACGGTaGCTCCCATTCATGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQLPRPR*LPFMIQ Trigger: CTGGATCATGAATGGGAGCCACCGTGGTCTTGGCAA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCGAAACCACATCAGGTaGGGGTCCCAGTATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQRNHIR*GSQYDG Trigger: ACCATCATACTGGGACCCCCACCTGATGTGGTTTCG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR CAA 72 bp | AGGGTCTGGAATATAATCAGGCCTCTTTCCCTGCAATaGTTCTTTCCCCTGGTGGCTCCACATTCTCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: RVWNIIRPLSLQ*FFPLVAPHSLT Trigger: AGTAAGAGAATGTGGAGCCACCAGGGGAAAGAACAATTGCAGGGAAAGAGGCCTGATTATATTCCAGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTGTGGTGGCTGGAACTaGAGTCTGTGTTCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQCGGWN*SLCSTE Trigger: CTCTGTTGAACACAGACTGCAGTTCCAGCCACCACA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTATAGGGTGGGACAGTaGTTAGAGAACAGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQYRVGQ*LENRLE Trigger: CTCCAGCCTGTTCTCTAACCACTGTCCCACCCTATA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCATCTCATGGAGATCTaGTGTTGGGACACGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQHLMEI*CWDTDI Trigger: TATGTCCGTGTCCCAACATCAGATCTCCATGAGATG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGATGTCAATGAAGCCCTaGACAGACTCCGAATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQMSMKP*TDSECP Trigger: TGGACATTCGGAGTCTGTGCAGGGCTTCATTGACAT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAGGAAAGCGAGTCTTTaGAGGAAACTGAGAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQRKASL*RKLRRR Trigger: CCGTCTTCTCAGTTTCCTCCAAAGACTCGCTTTCCT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGGCTTCCCAAATCAGTTaGAAGCATGACTGGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQASQIS*KHDWVH Trigger: ATGTACCCAGTCATGCTTTCAACTGATTTGGGAAGC...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCATGTAATGAGTAGGTaGAGGAAAGCGAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQHVMSR*RKASLW Trigger: CCAAAGACTCGCTTTCCTTCACCTACTCATTACATG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAGTATAGAGACGAGATaGCAACAGGTGGAACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQSIETR*QQVELW Trigger: CCAAAGTTCCACCTGTTGTCATCTCGTCTCTATACT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGACCAACAATGGTAGCTaGCATAGGAGTTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQTNNGS*HRSCRW Trigger: CCATCTACAACTCCTATGTCAGCTACCATTGTTGGT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTTTTATAACGGGGGTTaGTTGTGCAAGAGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQFYNGG*LCKRRG Trigger: ACCTCTCCTCTTGCACAACCAACCCCCGTTATAAAA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| 3UTR CAA 72 bp | ACAGAGATGCTATTAGTAGAAGTACAGGATTTCAGCTaGGGCTGGCTGACTGACAGTGTTCCTATTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEMLLVEVQDFS*GWLTDSVPIEK Trigger: TTTCTCAATAGGAACACTGTCAGTCAGCCAGCCCAAGCTGAAATCCTGTACTTCTACTAATAGCATCTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCTTACAGTCATGCAGTaGGGTTTCCATAAAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQLTVMQ*GFHKES Trigger: TGACTCTTTATGGAAACCTCACTGCATGACTGTAAG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAAATCAAGTAAGAATTaGCTCGGCTGGACTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQKSSKN*LGWTWR Trigger: TCTCCAAGTCCAGCCGAGTCAATTCTTACTTGATTT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCAGCTCTTACAGTCATaGAGTGAGGTTTCCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQQLLQS*SEVSIK Trigger: CTTTATGGAAACCTCACTGCATGACTGTAAGAGCTG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGATATCAAACAGCCTGTaGAAAGGCAGAGAAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQISNSL*KGREVR Trigger: TCTCACTTCTCTGCCTTTGCACAGGCTGTTTGATAT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAGAGCATCTAGTGTGTaGCAGGTTTTGAAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQRASSV*QVLKTQ Trigger: TTGTGTCTTCAAAACCTGGCACACACTAGATGCTCT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTTCTGGAACATCTCATaGAGATCTGATGTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQFWNIS*RSDVGT Trigger: TGTCCCAACATCAGATCTCCATGAGATGTTCCAGAA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTTCAACCATATGGAGTaGTGGCCATATTATAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQFNHME*WPYYSR Trigger: TCTGCTATAATATGGCCATCACTCCATATGGTTGAA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR GCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAAATGTTGCTGTATCTaGCACTTAGCCATTCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQKCCCI*HLAIRV Trigger: AACACGAATGGCTAAGTGGCAGATACAGCAACATTT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGCAAGAAAAGAATCAATaGTGGGGATTACTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQQEKNQ*WGLLQV Trigger: TACCTGGAGTAATCCCCACCATTGATTCTTTTCTTG...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR TCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTTTAGTGGGGAATTTTaGTTTCTACCTGTATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQFSGEF*FLPVCS Trigger: ACTGCATACAGGTAGAAATCAAAATTCCCCACTAAA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTACATATTTGAAAAATaGGCAACGAAACCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQYIFEK*ATKPHQ Trigger: CTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CCA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAAGTCACTTGTAATTTaGATACCAACAGTTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQKSLVI*IPTVST Trigger: GGTTGAAACTGTTGGTATCCAAATTACAAGTGACTT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS TCA 90 bp | CAGCTATGTTTTCGGACTTGCCAAGACCACGGTGGCTCCCATTCATaGTCCAGATTAGCTGTGGTGGCTGGAACTGCAGTCTGTGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QLCFRTCQDHGGSHS*SRLAVVAGTAVCVQ Trigger: TTGAACACAGACTGCAGTTCCAGCCACCACAGCTAATCTGGATCATGAATGGGAGCCACCGTGGTCTTGGCAAGTCCGAAAACATAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS GCA 90 bp | GTTTCCATAAAGAGTCACTGTTTCTTATTGTGTCATTCCAGCTCCTaGATGTCAATGAAGCCCTGCACAGACTCCGAATGTCCAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSIKSHCFLLCHSSS*MSMKPCTDSECPAD Trigger: GTCAGCTGGACATTCGGAGTCTGTGCAGGGCTTCATTGACATGCAGGAGCTGGAATGACACAATAAGAAACAGTGACTCTTTATGGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTATAACGGGGGTTGGTaGTGCAAGAGGAGAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQYNGGW*CKRRGL Trigger: CAAACCTCTCCTCTTGCACAACCAACCCCCGTTATA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTTGACTCGGCTGGACTaGGAGAATGATGGAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQLTRLD*ENDGEK Trigger: CTTTTCTCCATCATTCTCCAAGTCCAGCCGAGTCAA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAGTCACTGTTTCTTATaGTGTCATTCCAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQSHCFL*CHSSSC Trigger: GCAGGAGCTGGAATGACACAATAAGAAACAGTGACT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGATGGGAGAACAAATGTaGCTGTATCTGCCACTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQMGEQM*LYLPLS Trigger: GCTAAGTGGCAGATACAGCAACATTTGTTCTCCCAT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS TCA 90 bp | TCATCATCTATTTCTCTTCGGCACACAGCTCTTACAGTCATGCAGTaGGGTTTCCATAAAGAGTCACTGTTTCTTATTGTGTCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSISLRHTALTVMQ*GFHKESLFLIVSFQ Trigger: CTGGAATGACACAATAAGAAACAGTGACTCTTTATGGAAACCTCACTGCATGACTGTAAGAGCTGTGTGCCGAAGAGAAATAGATGATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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| CDS-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGAGTAGAAGTTATGGATaGTTTCCAGGCCAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQSRSYG*FPGQDD Trigger: ATCATCTTGGCCTGGAAACAATCCATAACTTCTACT...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS GCA 90 bp | CTAGATCATCATCTATTTCTCTTCGGCACACAGCTCTTACAGTCATaGAGTGAGGTTTCCATAAAGAGTCACTGTTTCTTATTGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LDHHLFLFGTQLLQS*SEVSIKSHCFLLCH Trigger: ATGACACAATAAGAAACAGTGACTCTTTATGGAAACCTCACTGCATGACTGTAAGAGCTGTGTGCCGAAGAGAAATAGATGATGATCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS-3UTR CAA 90 bp | AATAATACATATTTGAAAAATGGGCAACGAAACCACATCAGGTGGGGGTCCCAGTGTCATATGACAGTTTaGAGAGAGGTCTATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NNTYLKNGQRNHIRWGSQCHMTV*REVYTK Trigger: CTTTGTATAGACCTCTCTCAAAACTGTCATATGACA...CTGGGACCCCCACCTGATGTGGTTTCGTTGCCCATTTTTCAAATATGTATTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS GCA 72 bp | CCATTCATGATCCAGATTAGCTGTGGTGGCTGGAACTaGAGTCTGTGTTCAACAGAGGTCTTTAGGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PFMIQISCGGWN*SLCSTEVFRPR Trigger: CCGCGGCCTAAAGACCTCTGTTGAACACAGACTGCAGTTCCAGCCACCACAGCTAATCTGGATCATGAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS CCA 72 bp | TACTCAGCTATGTTTTCGGACTTGCCAAGACCACGGTaGCTCCCATTCATGATCCAGATTAGCTGTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: YSAMFSDLPRPR*LPFMIQISCGG Trigger: GCCACCACAGCTAATCTGGATCATGAATGGGAGCCACCGTGGTCTTGGCAAGTCCGAAAACATAGCTGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377957.4 |
||
| CDS GCA 72 bp | AAGAGTCACTGTTTCTTATTGTGTCATTCCAGCTCCTaGATGTCAATGAAGCCCTGCACAGACTCCGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: KSHCFLLCHSSS*MSMKPCTDSEC Trigger: ACATTCGGAGTCTGTGCAGGGCTTCATTGACATGCAGGAGCTGGAATGACACAATAAGAAACAGTGACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377957.4 |
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