Pregenerated sensors for FBXO47 (Homo sapiens)
Ensembl gene IDs: ENSG00000204952Ensembl transcript IDs: ENST00000378079.3
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTaGACAGCTAACATTCTATTTTGGTTTGGTGTTAGGTTGACTAAA | + |
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Preference number: 1 (lower is better) Translates to: LLQKCIHTGWLVPDS*TANILFWFGVRLTK Trigger: TTTAGTCAACCTAACACCAAACCAAAATAGAATGTTAGCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACGGTTTGGTGTTAGGTTaGCTAAAACCCGGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SLASKMHTYRLAGPRFLNGLVLG*LKPGEA Trigger: TGCCTCTCCGGGTTTTAGTCAACCTAACACCAAACC...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| 3UTR-3UTR CCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGGCTAACATTCTATTTTaGTTTGGTGTTAGGTTGACT | + |
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Preference number: 2 (lower is better) Translates to: LHIPKHHIANLHKTFWAMANILF*FGVRLT Trigger: AGTCAACCTAACACCAAACCAAAATAGAATGTTAGC...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| 3UTR-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCTGGTTTGGTGTTAGGTaGACTAAAACCCGGAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LASKMHTYRLAGPRFLNSWFGVR*TKTRRG Trigger: GCCTCTCCGGGTTTTAGTCAACCTAACACCAAACCA...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| 3UTR-3UTR CAA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGAATCTCAGCACATTCTaGAGGCTGCCTGTTATTTTT | + |
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Preference number: 3 (lower is better) Translates to: LHIPKHHIANLHKTFWAMNLSTF*RLPVIF Trigger: AAAAATAACAGGCAGCCTCAAGAATGTGCTGAGATT...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCGCCTTGCCAGTTCAATaGTGCGTCCATTCACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LASKMHTYRLAGPRFLNSALPVQ*CVHSQL Trigger: AAGCTGTGAATGGACGCACCATTGAACTGGCAAGGC...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCAATGTTGATATGGGTTaGAAGCCTGAGCCAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LASKMHTYRLAGPRFLNSNVDMG*KPEPRV Trigger: GACCCTTGGCTCAGGCTTTCAACCCATATCAACATT...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACGGGCACTTCCTGGTTTaGTGCAGACAGCCATTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNGHFLV*CRQPFV Trigger: TACAAATGGCTGTCTGCAGCAAACCAGGAAGTGCCC...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAAAGACTACGAGCCTTaGCAGTTCAATGGTGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNKDYEP*QFNGAS Trigger: GGACGCACCATTGAACTGGCAAGGCTCGTAGTCTTT...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACCTGAGCCAAGGGTCTTaGAATAACAGCTGGTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNLSQGS*NNSWFD Trigger: GTCAAACCAGCTGTTATTCCAAGACCCTTGGCTCAG...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACTTTTTGGGCACTTCCTaGTTTGCTGCAGACAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNFLGTS*FAADSH Trigger: ATGGCTGTCTGCAGCAAACCAGGAAGTGCCCAAAAA...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCTACATACAGGTTGGCTaGTCCCAGATTCTTGAACAG | + |
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Preference number: 4 (lower is better) Translates to: LASKMHTYRLAGPRFLNSYIQVG*SQILEQ Trigger: CTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTA...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCCCATGCTTAGCATGCTaGTATCCTTCACTGACAAAT | + |
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Preference number: 4 (lower is better) Translates to: LASKMHTYRLAGPRFLNSPCLAC*YPSLTN Trigger: ATTTGTCAGTGAAGGATATCAGCATGCTAAGCATGG...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACCTTCGATGTGTCCAATaGTCAAGGAGGACATTCCTA | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNLRCVQ*SRRTFL Trigger: TAGGAATGTCCTCCTTGATCATTGGACACATCGAAG...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACTACAGTAATCTTGCCTaGTTCACCATTGGCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNYSNLA*FTIGHG Trigger: ACCATGGCCAATGGTGAATCAGGCAAGATTACTGTA...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACCACTTCCTGGTTTGCTaGAGACAGCCATTTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNHFLVC*RQPFVS Trigger: AGATACAAATGGCTGTCTGCAGCAAACCAGGAAGTG...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACTTGCCAGTTCAATGGTaGGTCCATTCACAGCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNLPVQW*VHSQLY Trigger: GTAAAGCTGTGAATGGACGCACCATTGAACTGGCAA...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCTTTATCCACAGATTTTaGCAGTTTTTCCGGCTACAG | + |
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Preference number: 4 (lower is better) Translates to: LASKMHTYRLAGPRFLNSFIHRF*QFFRLQ Trigger: CTGTAGCCGGAAAAACTGTCAAAATCTGTGGATAAA...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGGGTTTGGTGTTAGGTTaGCTAAAACCCGGAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMGLVLG*LKPGEA Trigger: TGCCTCTCCGGGTTTTAGTCAACCTAACACCAAACC...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACACAGAGGAGTATTCATaGTCAAATACAGGACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNTEEYS*SNTGPP Trigger: AGGAGGTCCTGTATTTGACCATGAATACTCCTCTGT...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGTATGGGTTGAAAGCCTaGGCCAAGGGTCTTGGAATA | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMYGLKA*AKGLGI Trigger: TATTCCAAGACCCTTGGCTCAGGCTTTCAACCCATA...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCTCTGTGAGTATCTTGTaGATGTATTTTAGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LASKMHTYRLAGPRFLNSSVSIL*MYFSLS Trigger: GGAAAGGCTAAAATACATTCACAAGATACTCACAGA...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACACATGCAAATGCATTTaGCACATTCTGCAGGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNTCKCI*HILQEV Trigger: AACTTCCTGCAGAATGTGGCAAATGCATTTGCATGT...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGAGAGTCACAGGAAAGTaGGAGTTAGTCGTTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMRVTGK*ELVVLP Trigger: GGGCAAAACGACTAACTCCCACTTTCCTGTGACTCT...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACTTCCAAATGTTGATATaGGTTGAAAGCCTGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNFQMLI*VESLSQ Trigger: TTGGCTCAGGCTTTCAACCCATATCAACATTTGGAA...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGTTAGCCTTTCCTTGGTaGGTAGCAGCAATGTGCATC | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMLAFPW*VAAMCI Trigger: GATGCACATTGCTGCTACCCACCAAGGAAAGGCTAA...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACGTTCTTTCTTTCCACTaGAGTGCTAAAGACTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNVLSFH*SAKDFA Trigger: TGCAAAGTCTTTAGCACTCCAGTGGAAAGAAAGAAC...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACTCCTACAGAAGAGTCTaGTTCTTAACTCCAGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNSYRRV*FLTPVF Trigger: AAAAACTGGAGTTAAGAATCAGACTCTTCTGTAGGA...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACGTCTCCAGACATAATTaGTTGCAGCATTTCCATTAT | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNVSRHN*LQHFHY Trigger: ATAATGGAAATGCTGCAATCAATTATGTCTGGAGAC...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACGTAGTAAAAGTCTTTTaGTTCCTGATGAGGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNVVKVF*FLMRLR Trigger: TCTCAACCTCATCAGGAAGCAAAAGACTTTTACTAC...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGGTTAATCCTAAACACTaGATAGGAGCTGCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMVNPKH*IGAAQP Trigger: TGGCTGTGCAGCTCCTATGCAGTGTTTAGGATTAAC...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACATCTTGAGGAGATATTaGCCCAAAGATGATATACAG | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNILRRY*PKDDIQ Trigger: CTGTATATCATCTTTGGGCCAATATCTCCTCAAGAT...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGGGCAGCTCAAGGTTATaGAAGTCCTGTAGTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMGSSRL*KSCSKS Trigger: ACTTTTACTACAGGACTTTCATAACCTTGAGCTGCC...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGTTATGGAAGTTAGCCTaGGCATGTACAAGATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMLWKLA*ACTRWN Trigger: GTTCCATCTTGTACATGCTCAGGCTAACTTCCATAA...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGTCTTCTATCATTTCCTaGCAAACCACCTGTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMSSIIS*QTTCPS Trigger: AGATGGACAGGTGGTTTGGCAGGAAATGATAGAAGA...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACGCTAACATTCTATTTTaGTTTGGTGTTAGGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: SLASKMHTYRLAGPRFLNANILF*FGVRLT Trigger: AGTCAACCTAACACCAAACCAAAATAGAATGTTAGC...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGACACTGCATAGGAGCTaGACAGCCATTGAATTTAAA | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMTLHRS*TAIEFK Trigger: TTTAAATTCAATGGCTGTGCAGCTCCTATGCAGTGT...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR GCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGACTGATAACATCATCTaGTGTCCACTCTTTAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMTDNII*CPLFSA Trigger: AGCACTAAAGAGTGGACAGCAGATGATGTTATCAGT...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGTCTTGGAATAACAGCTaGTTTGACGATTACTACGTC | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMSWNNS*FDDYYV Trigger: GACGTAGTAATCGTCAAACCAGCTGTTATTCCAAGA...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR TCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGATATTGGCCCAAAGATaGTATACAGTAATCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMILAQR*YTVILP Trigger: AGGCAAGATTACTGTATATCATCTTTGGGCCAATAT...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CCA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGCTACGTCTAAGTTTCTaGTTGGGAATCAAAGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LHIPKHHIANLHKTFWAMLRLSF*LGIKVK Trigger: TTTCACTTTGATTCCCAACCAGAAACTTAGACGTAG...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCTGGGCACTTCCTGGTTaGCTGCAGACAGCCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: LASKMHTYRLAGPRFLNSWALPG*LQTAIC Trigger: ACAAATGGCTGTCTGCAGCAAACCAGGAAGTGCCCA...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACCAGTATAGCAGAGTCTaGTCTCCTGTCAGGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SLASKMHTYRLAGPRFLNQYSRV*SPVRQL Trigger: GAGCTGCCTGACAGGAGACAAGACTCTGCTATACTG...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCGCTGCAGACAGCCATTaGTATCTTGCGGCAGAGATT | + |
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Preference number: 5 (lower is better) Translates to: LASKMHTYRLAGPRFLNSAADSH*YLAAEI Trigger: AATCTCTGCCGCAAGATACAAATGGCTGTCTGCAGC...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCAAAAGACTACGAGCCTaGCCAGTTCAATGGTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: LASKMHTYRLAGPRFLNSKRLRA*PVQWCV Trigger: GACGCACCATTGAACTGGCAAGGCTCGTAGTCTTTT...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS GCA 90 bp | GTACAGTTCTTTCTCACACACCAAAGCCAAAAAGACTACGAGCCTTaGCAGTTCAATGGTGCGTCCATTCACAGCTTTACTAGCCATGAA | + |
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Preference number: 5 (lower is better) Translates to: VQFFLTHQSQKDYEP*QFNGASIHSFTSHE Trigger: TTCATGGCTAGTAAAGCTGTGAATGGACGCACCATTGAACTGGCAAGGCTCGTAGTCTTTTTGGCTTTGGTGTGTGAGAAAGAACTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCATGCATACATACAGGTaGGCTGGTCCCAGATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LASKMHTYRLAGPRFLNSMHTYR*AGPRFL Trigger: CAAGAATCTGGGACCAGCCAACCTGTATGTATGCAT...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS TCA 90 bp | TCCAGTATAGCAGAGTCTTGTCTCCTGTCAGGCAGCTCAAGGTTATaGAAGTCCTGTAGTAAAAGTCTTTTGCTTCCTGATGAGGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSIAESCLLSGSSRL*KSCSKSLLLPDEVE Trigger: CTCAACCTCATCAGGAAGCAAAAGACTTTTACTACAGGACTTTCATAACCTTGAGCTGCCTGACAGGAGACAAGACTCTGCTATACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS TCA 90 bp | TTCGATGTGTCCAATGATCAAGGAGGACATTCCTACAGAAGAGTCTaGTTCTTAACTCCAGTTTTTGGGCACTTCCTGGTTTGCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: FDVSNDQGGHSYRRV*FLTPVFGHFLVCCR Trigger: TCTGCAGCAAACCAGGAAGTGCCCAAAAACTGGAGTTAAGAATCAGACTCTTCTGTAGGAATGTCCTCCTTGATCATTGGACACATCGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS TCA 90 bp | CCTGCCAAACCACCTGTCCATCTTGAGGAGATATTGGCCCAAAGATaGTATACAGTAATCTTGCCTGATTCACCATTGGCCATGGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: PAKPPVHLEEILAQR*YTVILPDSPLAMVL Trigger: TAAAACCATGGCCAATGGTGAATCAGGCAAGATTACTGTATATCATCTTTGGGCCAATATCTCCTCAAGATGGACAGGTGGTTTGGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACTGGGAGTTAGTCGTTTaGCCCCACCATCCTCAAATT | + |
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Preference number: 5 (lower is better) Translates to: SLASKMHTYRLAGPRFLNWELVV*PHHPQI Trigger: AATTTGAGGATGGTGGGGCAAAACGACTAACTCCCA...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCTATTTTAGCCTTTCCTaGGTGGGTAGCAGCAATGTG | + |
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Preference number: 5 (lower is better) Translates to: LASKMHTYRLAGPRFLNSYFSLS*VGSSNV Trigger: CACATTGCTGCTACCCACCAAGGAAAGGCTAAAATA...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCACAGCCATTTGTATCTaGCGGCAGAGATTAGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LASKMHTYRLAGPRFLNSTAICI*RQRLVS Trigger: ACTGACTAATCTCTGCCGCAAGATACAAATGGCTGT...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | TCTCTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACGGAATAACAGCTGGTTaGACGATTACTACGTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: SLASKMHTYRLAGPRFLNGITAG*TITTSK Trigger: CTTAGACGTAGTAATCGTCAAACCAGCTGTTATTCC...GTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCTTGCCTGATTCACCATaGGCCATGGTTTTAATATTC | + |
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Preference number: 5 (lower is better) Translates to: LASKMHTYRLAGPRFLNSLPDSP*AMVLIF Trigger: GAATATTAAAACCATGGCCAATGGTGAATCAGGCAA...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTCAAAAATGCATACATACAGGTTGGCTGGTCCCAGATTCTTGAACAGCGGAGTGCTAAAGACTTaGCAGACTTTTTGCATCATT | + |
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Preference number: 5 (lower is better) Translates to: LASKMHTYRLAGPRFLNSGVLKT*QTFCII Trigger: AATGATGCAAAAAGTCTGCAAAGTCTTTAGCACTCC...GCTGTTCAAGAATCTGGGACCAGCCAACCTGTATGTATGCATTTTTGAAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGTGTTGGCTGACTGTTTaGGACACCATGCTTAGCATG | + |
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Preference number: 5 (lower is better) Translates to: LHIPKHHIANLHKTFWAMCWLTV*DTMLSM Trigger: CATGCTAAGCATGGTGTCCAAAACAGTCAGCCAACA...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGAACCACCTGTCCATCTaGAGGAGATATTGGCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LHIPKHHIANLHKTFWAMNHLSI*RRYWPK Trigger: TTTGGGCCAATATCTCCTCAAGATGGACAGGTGGTT...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS TCA 90 bp | GGAGTATTCATGGTCAAATACAGGACCTCCTTATGGAAGTTAGCCTaGGCATGTACAAGATGGAACAAATTCAAAAAGCTTCTGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: GVFMVKYRTSLWKLA*ACTRWNKFKKLLSS Trigger: AGATGACAGAAGCTTTTTGAATTTGTTCCATCTTGTACATGCTCAGGCTAACTTCCATAAGGAGGTCCTGTATTTGACCATGAATACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGCACATGCAAATGCATTaGCCACATTCTGCAGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LHIPKHHIANLHKTFWAMHMQMH*PHSAGS Trigger: ACTTCCTGCAGAATGTGGCAAATGCATTTGCATGTG...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS CCA 90 bp | TGCAAATGCATTTGCCACATTCTGCAGGAAGTTCTTTCTTTCCACTaGAGTGCTAAAGACTTTGCAGACTTTTTGCATCATTTTAACTGT | + |
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Preference number: 5 (lower is better) Translates to: CKCICHILQEVLSFH*SAKDFADFLHHFNC Trigger: ACAGTTAAAATGATGCAAAAAGTCTGCAAAGTCTTTAGCACTCCAGTGGAAAGAAAGAACTTCCTGCAGAATGTGGCAAATGCATTTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS GCA 90 bp | AAGTTCTTTCTTTCCACTGGAGTGCTAAAGACTTTGCAGACTTTTTaGATCATTTTAACTGTCCAATCCATGCAGTACAGTTCTTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: KFFLSTGVLKTLQTF*IILTVQSMQYSSFS Trigger: TGAGAAAGAACTGTACTGCATGGATTGGACAGTTAAAATGATGCAAAAAGTCTGCAAAGTCTTTAGCACTCCAGTGGAAAGAAAGAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS-3UTR CAA 90 bp | CTACACATTCCAAAACACCATATTGCAAATCTTCACAAAACATTCTGGGCTATGCGTCTAAGTTTCTGGTaGGGAATCAAAGTGAAATTT | + |
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Preference number: 5 (lower is better) Translates to: LHIPKHHIANLHKTFWAMRLSFW*GIKVKF Trigger: AAATTTCACTTTGATTCCCAACCAGAAACTTAGACG...CATAGCCCAGAATGTTTTGTGAAGATTTGCAATATGGTGTTTTGGAATGTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS CAA 72 bp | CTTTCTCACACACCAAAGCCAAAAAGACTACGAGCCTaGCCAGTTCAATGGTGCGTCCATTCACAGCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: LSHTPKPKRLRA*PVQWCVHSQLY Trigger: GTAAAGCTGTGAATGGACGCACCATTGAACTGGCAAGGCTCGTAGTCTTTTTGGCTTTGGTGTGTGAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS TCA 72 bp | CCACCTGTCCATCTTGAGGAGATATTGGCCCAAAGATaGTATACAGTAATCTTGCCTGATTCACCATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PPVHLEEILAQR*YTVILPDSPLA Trigger: GGCCAATGGTGAATCAGGCAAGATTACTGTATATCATCTTTGGGCCAATATCTCCTCAAGATGGACAGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS TCA 72 bp | GCAGAGTCTTGTCTCCTGTCAGGCAGCTCAAGGTTATaGAAGTCCTGTAGTAAAAGTCTTTTGCTTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: AESCLLSGSSRL*KSCSKSLLLPD Trigger: ATCAGGAAGCAAAAGACTTTTACTACAGGACTTTCATAACCTTGAGCTGCCTGACAGGAGACAAGACTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS CAA 72 bp | GCACTTCCTGGTTTGCTGCAGACAGCCATTTGTATCTaGCGGCAGAGATTAGTCAGTTCGCATAAGAAATTA | + |
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Preference number: 6 (lower is better) Translates to: ALPGLLQTAICI*RQRLVSSHKKL Trigger: TAATTTCTTATGCGAACTGACTAATCTCTGCCGCAAGATACAAATGGCTGTCTGCAGCAAACCAGGAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS CAA 90 bp | GTGCGTCCATTCACAGCTTTACTAGCCATGAAACTGAAACAGATGTaGTTTCCACTTAGCATTAGGAGACGTGCATTATTCTCTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: VRPFTALLAMKLKQM*FPLSIRRRALFSRS Trigger: GCTTCTAGAGAATAATGCACGTCTCCTAATGCTAAGTGGAAACAACATCTGTTTCAGTTTCATGGCTAGTAAAGCTGTGAATGGACGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS CAA 90 bp | ACATTCTGCAGGAAGTTCTTTCTTTCCACTGGAGTGCTAAAGACTTaGCAGACTTTTTGCATCATTTTAACTGTCCAATCCATGCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: TFCRKFFLSTGVLKT*QTFCIILTVQSMQY Trigger: GTACTGCATGGATTGGACAGTTAAAATGATGCAAAAAGTCTGCAAAGTCTTTAGCACTCCAGTGGAAAGAAAGAACTTCCTGCAGAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS CCA 72 bp | ATTTGCCACATTCTGCAGGAAGTTCTTTCTTTCCACTaGAGTGCTAAAGACTTTGCAGACTTTTTGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: ICHILQEVLSFH*SAKDFADFLHH Trigger: ATGATGCAAAAAGTCTGCAAAGTCTTTAGCACTCCAGTGGAAAGAAAGAACTTCCTGCAGAATGTGGCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS CAA 90 bp | GAAGTTCTTTCTTTCCACTGGAGTGCTAAAGACTTTGCAGACTTTTaGCATCATTTTAACTGTCCAATCCATGCAGTACAGTTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: EVLSFHWSAKDFADF*HHFNCPIHAVQFFL Trigger: GAGAAAGAACTGTACTGCATGGATTGGACAGTTAAAATGATGCAAAAAGTCTGCAAAGTCTTTAGCACTCCAGTGGAAAGAAAGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS TCA 72 bp | TTGAATTTAAAGCAGGAAACTTCTGTGAGTATCTTGTaGATGTATTTTAGCCTTTCCTTGGTGGGTAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LNLKQETSVSIL*MYFSLSLVGSS Trigger: GCTGCTACCCACCAAGGAAAGGCTAAAATACATTCACAAGATACTCACAGAAGTTTCCTGCTTTAAATTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS TCA 72 bp | ATGGTCAAATACAGGACCTCCTTATGGAAGTTAGCCTaGGCATGTACAAGATGGAACAAATTCAAAAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: MVKYRTSLWKLA*ACTRWNKFKKL Trigger: AAGCTTTTTGAATTTGTTCCATCTTGTACATGCTCAGGCTAACTTCCATAAGGAGGTCCTGTATTTGACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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| CDS GCA 72 bp | CTGTCATCTTCATCACGGTCTCCAGACATAATTGATTaGAGCATTTCCATTATAACACATGCAAATGCATTT | + |
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Preference number: 6 (lower is better) Translates to: LSSSSRSPDIID*SISIITHANAF Trigger: AAATGCATTTGCATGTGTTATAATGGAAATGCTGCAATCAATTATGTCTGGAGACCGTGATGAAGATGACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378079.3 |
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