RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO45 (Homo sapiens)

Ensembl gene IDs: ENSG00000174013

Ensembl transcript IDs: ENST00000311630.7, ENST00000440469.1

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGCTGGGTGTGGGCTGTTCCTAATAAAGGCTTCCAAGTGGTCCTaGTTATCTACCACAGTCCCAATTGTGGAACTGTGGTGGTCTCAA +
Preference number: 1 (lower is better)
Translates to: WAGCGLFLIKASKWS*LSTTVPIVELWWSQ
Trigger: TTGAGACCACCACAGTTCCACAATTGGGACTGTGGTAGATAATCAGGACCACTTGGAAGCCTTTATTAGGAACAGCCCACACCCAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR GCA 90 bp AACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTaGAACCCTGAGGATTTTTCTGGCCCAGTAGAAAGAGGAAACACG +
Preference number: 1 (lower is better)
Translates to: NIGCNMHMSTAHSTN*NPEDFSGPVERGNT
Trigger: CGTGTTTCCTCTTTCTACTGGGCCAGAAAAATCCTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 90 bp TTTGTCTTTCTCCGCAGTTCTTTCTCTGTTCCTTCAGCAAATATGTaGGCACCTGCCTATTGGGCTTACATGTTGTGGCACAAAGATGAG +
Preference number: 1 (lower is better)
Translates to: FVFLRSSFSVPSANM*APAYWAYMLWHKDE
Trigger: CTCATCTTTGTGCCACAACATGTAAGCCCAATAGGCAGGTGCTCACATATTTGCTGAAGGAACAGAGAAAGAACTGCGGAGAAAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR GCA 90 bp AAGACCATAGTAGGGATAATAGTAACGTCTGCTTCCACATCTGCATaGTTCGTTAACCAACCAAAGAAAGTGCTCCAGGTTTCCCAAGTC +
Preference number: 1 (lower is better)
Translates to: KTIVGIIVTSASTSA*FVNQPKKVLQVSQV
Trigger: GACTTGGGAAACCTGGAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTACTATTATCCCTACTATGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 90 bp CGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTaGTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTT +
Preference number: 1 (lower is better)
Translates to: RLLPHLHASLTNQRK*SRFPKSTKYTQLHF
Trigger: AAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR CCA 90 bp GCTGCTTCTCCAGTTTACGACTTCATGTGTTTTCAGGATGTTTCTTaGACATGCATGTGTGACAGTCACTTCATGGTTCTACTTCCCATA +
Preference number: 1 (lower is better)
Translates to: AASPVYDFMCFQDVS*TCMCDSHFMVLLPI
Trigger: TATGGGAAGTAGAACCATGAAGTGACTGTCACACATGCATGTCCAAGAAACATCCTGAAAACACATGAAGTCGTAAACTGGAGAAGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 90 bp TTACGACTTCATGTGTTTTCAGGATGTTTCTTGGACATGCATGTGTaGCAGTCACTTCATGGTTCTACTTCCCATAAGCAGATCTCTCCT +
Preference number: 1 (lower is better)
Translates to: LRLHVFSGCFLDMHV*QSLHGSTSHKQISP
Trigger: AGGAGAGATCTGCTTATGGGAAGTAGAACCATGAAGTGACTGTCACACATGCATGTCCAAGAAACATCCTGAAAACACATGAAGTCGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 90 bp TCTCCAGTTTACGACTTCATGTGTTTTCAGGATGTTTCTTGGACATaGATGTGTGACAGTCACTTCATGGTTCTACTTCCCATAAGCAGA +
Preference number: 1 (lower is better)
Translates to: SPVYDFMCFQDVSWT*MCDSHFMVLLPISR
Trigger: TCTGCTTATGGGAAGTAGAACCATGAAGTGACTGTCACACATGCATGTCCAAGAAACATCCTGAAAACACATGAAGTCGTAAACTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 90 bp CTTGTAAACTTTTCAGGTGGCAACAATAAATCTTTGTTCTATGGCTaGAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAA +
Preference number: 1 (lower is better)
Translates to: LVNFSGGNNKSLFYG*NPLLHRSIDNLNSQ
Trigger: TTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATTTATTGTTGCCACCTGAAAAGTTTACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 90 bp ATAGGAGTTAATGTTAAACTCTTCTACAACGAAACCTTCAAATATTaGCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCC +
Preference number: 1 (lower is better)
Translates to: IGVNVKLFYNETFKY*QPEVFSTRCCISSP
Trigger: GGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGAGTTTAACATTAACTCCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 90 bp TCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCCTaGTCATACTATGAATTGAAACAGAACACTCCTTTGACTTTTAAT +
Preference number: 1 (lower is better)
Translates to: SRFPKSTKYTQLHFP*SYYELKQNTPLTFN
Trigger: ATTAAAAGTCAAAGGAGTGTTCTGTTTCAATTCATAGTATGATCAGGGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp TTACACTCAATCTTCAGGCGCAACTGTCTTCTACCGAAATGCTCTCCTCAGCACAGAATCCCGGCCAGCTaGTGGGTGTCCCTAATCAGA +
Preference number: 2 (lower is better)
Translates to: LHSIFRRNCLLPKCSPQHRIPAS*WVSLIR
Trigger: TCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCT...GTGCTGAGGAGAGCATTTCGGTAGAAGACAGTTGCGCCTGAAGATTGAGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp CCTCAAGTTTGCAACCCTTTCCTTCCTGCTTCACTGGGACTAGAACAGAATTTCATTAGCCAGGTGTGGTaGCACATGCTACTCGGGAGG +
Preference number: 2 (lower is better)
Translates to: PQVCNPFLPASLGLEQNFISQVW*HMLLGR
Trigger: CCTCCCGAGTAGCATGTGCCACCACACCTGGCTAAT...GAAATTCTGTTCTAGTCCCAGTGAAGCAGGAAGGAAAGGGTTGCAAACTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR-3UTR TCA 90 bp TTAACTCCCAAGGAGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAAATATTGCCAACCTaGAGTTTTCAGCACAAGGTG +
Preference number: 2 (lower is better)
Translates to: LTPKEQSKNPGQLLGVPNQILPT*SFQHKV
Trigger: CACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTG...ATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCTCCTTGGGAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp ATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTGCAACCCTGAGCACGAAGATAATCTCTaGTGTAGAGCTGCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: IGCNMHMSTAHSTNCNPEHEDNL*CRAASP
Trigger: TGGAGAAGCAGCTCTACAGCAGAGATTATCTTCGTG...CTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCATCCCGGCCAGCTGCTaGGTGTCCCTAATCAGATTT +
Preference number: 2 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFIPASC*VSLIRF
Trigger: AAATCTGATTAGGGACACCCAGCAGCTGGCCGGGAT...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp TTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTTTGGACATGCATGTGTaGCAGTCACTTCATGGTTCT +
Preference number: 2 (lower is better)
Translates to: LETTSGATCICQLPTQPTLDMHV*QSLHGS
Trigger: AGAACCATGAAGTGACTGTCACACATGCATGTCCAA...AGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp TTACACTCAATCTTCAGGCGCAACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGTTCTGTGTTATaGGACACTTTCTTAGAAGGC +
Preference number: 2 (lower is better)
Translates to: LHSIFRRNCLLPKCSPQHQCSVL*DTFLEG
Trigger: GCCTTCTAAGAAAGTGTCTCATAACACAGAACATTG...GTGCTGAGGAGAGCATTTCGGTAGAAGACAGTTGCGCCTGAAGATTGAGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp TTCTGGCCCAGTAGAAAGAGGAAACACGAAGATAATCTCTGCTGTAGAGCTGCTGATGTTTCTTGGACATaGATGTGTGACAGTCACTTC +
Preference number: 2 (lower is better)
Translates to: FWPSRKRKHEDNLCCRAADVSWT*MCDSHF
Trigger: GAAGTGACTGTCACACATGCATGTCCAAGAAACATC...AGCAGCTCTACAGCAGAGATTATCTTCGTGTTTCCTCTTTCTACTGGGCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGACATGCATATGTCAACTaGCCACTCAACCAACTGCAA +
Preference number: 2 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGHAYVN*PLNQLQ
Trigger: TTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATG...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR CAA 90 bp ATAAATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATaGACAATCTTAACTCCCAAGGAGCAATCCAAGAATCCCGGCCAG +
Preference number: 2 (lower is better)
Translates to: INLCSMAEIPCFTGV*TILTPKEQSKNPGQ
Trigger: CTGGCCGGGATTCTTGGATTGCTCCTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCACATCGGGTGCAACATaGATATGTCAACTGCCCACT +
Preference number: 2 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSTSGAT*ICQLPT
Trigger: AGTGGGCAGTTGACATATGCATGTTGCACCCGATGT...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCACTTTTAGAGAAGTaGAGTCCAGGCAGACCATGC +
Preference number: 2 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLSLLEK*SPGRPC
Trigger: GCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGA...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCTTTCAGGATGTTTCTTaGACATGCATGTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFFQDVS*TCMCDS
Trigger: ACTGTCACACATGCATGTCCAAGAAACATCCTGAAA...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp GTAACGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTGCTCCAGGCAGTTGTAAAATaGGATCAGTCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: VTSASTSACFVNQPKKVLQAVVK*DQSSQT
Trigger: TGTTTGTGAAGACTGATCCCATTTTACAACTGCCTG...GAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR CAA 90 bp AAAGTGACTACAAAGTGTATACAGCCAACACTGAGAACCACTGGTTaGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTCTACCG +
Preference number: 2 (lower is better)
Translates to: KVTTKCIQPTLRTTG*NDLHSIFRRNCLLP
Trigger: CGGTAGAAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAGTGTTGGCTGTATACACTTTGTAGTCACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCGATATTCCATCTCCTTaGGCACTGCAGCAGTTTAAG +
Preference number: 2 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSDIPSP*ALQQFK
Trigger: CTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATC...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTGATGTTTCTTGGACATaGATGTGTGACAGTCACTTC +
Preference number: 2 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSDVSWT*MCDSHF
Trigger: GAAGTGACTGTCACACATGCATGTCCAAGAAACATC...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp GTAACGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTGCTCGAAACCTTCAAATATTaGCAACCTGAAGTTTTCAGC +
Preference number: 2 (lower is better)
Translates to: VTSASTSACFVNQPKKVLETFKY*QPEVFS
Trigger: GCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTC...GAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp TTAACCTGTTTCAGCTGGGTAAGTAAACGTTTTCTTTATAGCCCCAATAACGAGTTGGACATGCATGTGTaGCAGTCACTTCATGGTTCT +
Preference number: 2 (lower is better)
Translates to: LTCFSWVSKRFLYSPNNELDMHV*QSLHGS
Trigger: AGAACCATGAAGTGACTGTCACACATGCATGTCCAA...CTCGTTATTGGGGCTATAAAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTCCCAGATGCTCATGCTaGTCACTTCAATTGCATATG +
Preference number: 2 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTPRCSC*SLQLHM
Trigger: CATATGCAATTGAAGTGAGCAGCATGAGCATCTGGG...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTTTTCAGGATGTTTCTTaGACATGCATGTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLFQDVS*TCMCDS
Trigger: ACTGTCACACATGCATGTCCAAGAAACATCCTGAAA...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTCAGGCAGTTGTAAAATaGGATCAGTCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLQAVVK*DQSSQT
Trigger: TGTTTGTGAAGACTGATCCCATTTTACAACTGCCTG...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGAATAGCTTTCATATTTaGGGCCTACAAGAGCAAATG +
Preference number: 2 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKNSFHI*GLQEQM
Trigger: CATTTGCTCTTGTAGGCCTCAAATATGAAAGCTATT...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTACACGAAGATAATCTCTaGTGTAGAGCTGCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILHEDNL*CRAASP
Trigger: TGGAGAAGCAGCTCTACAGCAGAGATTATCTTCGTG...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGAACATCGGGTGCAACATaGATATGTCAACTGCCCACT +
Preference number: 2 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRTSGAT*ICQLPT
Trigger: AGTGGGCAGTTGACATATGCATGTTGCACCCGATGT...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTCAATGTTCTGTGTTATaGGACACTTTCTTAGAAGGC +
Preference number: 2 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGQCSVL*DTFLEG
Trigger: GCCTTCTAAGAAAGTGTCTCATAACACAGAACATTG...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGATCTTTGTTCTATGGCTaGAATCCCTTGCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRSLFYG*NPLLHR
Trigger: CCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGA...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTTTAACCTGTTTCAGCTaGGTAAGTAAACGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLLTCFS*VSKRFL
Trigger: AAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTTCAGCTCATGTGGGTTaGATTATTAATTCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLSAHVG*IINSKA
Trigger: TGCTTTTGAATTAATAATCCAACCCACATGAGCTGA...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR GCA 90 bp CAATCTTTAGCCAGGAGACTGAGAGATCTTTACTATGATTTTGAGAGTAAAAACAGAGACAACATCGGGTaGAACATGCATATGTCAACT +
Preference number: 2 (lower is better)
Translates to: QSLARRLRDLYYDFESKNRDNIG*NMHMST
Trigger: AGTTGACATATGCATGTTGCACCCGATGTTGTCTCT...GTTTTTACTCTCAAAATCATAGTAAAGATCTCTCAGTCTCCTGGCTAAAGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGACACTTCAATTGCATATaGTTTGCGAATGGGACATTC +
Preference number: 2 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRHFNCI*FANGTF
Trigger: GAATGTCCCATTCGCAAATCATATGCAATTGAAGTG...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR TCA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGATCCAACATTCCAAAGTaGCTACAAAGTGTATACAGC +
Preference number: 2 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRSNIPK*LQSVYS
Trigger: GCTGTATACACTTTGTAGTCACTTTGGAATGTTGGA...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTGGTTTCTTCTTAACCTaGACATCGAAAAGAATCTTT +
Preference number: 2 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTGFFLT*TSKRIF
Trigger: AAAGATTCTTTTCGATGTCCAGGTTAAGAAGAAACC...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTCATATGATTTGCGAATaGGACATTCGGGAATTTAAA +
Preference number: 2 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTHMICE*DIREFK
Trigger: TTTAAATTCCCGAATGTCCCATTCGCAAATCATATG...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CCA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGAAACTCTCAGCTCATGTaGGTTGGATTATTAATTCAA +
Preference number: 2 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRNSQLM*VGLLIQ
Trigger: TTGAATTAATAATCCAACCCACATGAGCTGAGAGTT...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 72 bp AGGCACGAGAATTGCTTGAACCTGGGTGGCAAAGGTTaGAGTGAGTCAAGATCGTGCACTCCAGCCTGCGTG +
Preference number: 3 (lower is better)
Translates to: RHENCLNLGGKG*SESRSCTPACV
Trigger: CACGCAGGCTGGAGTGCACGATCTTGACTCACTGCAACCTTTGCCACCCAGGTTCAAGCAATTCTCGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR-3UTR CAA 90 bp CCTCAAGTTTGCAACCCTTTCCTTCCTGCTTCACTGGGACTAGAACAGAATTTCAGGCACGAGAATTGCTaGAACCTGGGTGGCAAAGGT +
Preference number: 3 (lower is better)
Translates to: PQVCNPFLPASLGLEQNFRHENC*NLGGKG
Trigger: ACCTTTGCCACCCAGGTTCAAGCAATTCTCGTGCCT...GAAATTCTGTTCTAGTCCCAGTGAAGCAGGAAGGAAAGGGTTGCAAACTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR TCA 72 bp CTCCGCAGTTCTTTCTCTGTTCCTTCAGCAAATATGTaGGCACCTGCCTATTGGGCTTACATGTTGTGGCAC +
Preference number: 3 (lower is better)
Translates to: LRSSFSVPSANM*APAYWAYMLWH
Trigger: GTGCCACAACATGTAAGCCCAATAGGCAGGTGCTCACATATTTGCTGAAGGAACAGAGAAAGAACTGCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR GCA 72 bp TGCAACATGCATATGTCAACTGCCCACTCAACCAACTaGAACCCTGAGGATTTTTCTGGCCCAGTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: CNMHMSTAHSTN*NPEDFSGPVER
Trigger: TCTTTCTACTGGGCCAGAAAAATCCTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 72 bp CACATTGCTAACTTAGAGACAACATCGGGTGCAACATaGATATGTCAACTGCCCACTCAACCAACTGCAACC +
Preference number: 3 (lower is better)
Translates to: HIANLETTSGAT*ICQLPTQPTAT
Trigger: GGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAAGTTAGCAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CAA 90 bp GTAACGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTGCTCTTTCAGCACAAGGTGTaGTATTTCAAGTCCCATGGG +
Preference number: 3 (lower is better)
Translates to: VTSASTSACFVNQPKKVLFQHKV*YFKSHG
Trigger: CCCATGGGACTTGAAATACAACACCTTGTGCTGAAA...GAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 72 bp AACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATaGCAAAGATATTCCATCTCCTTGAGCACTGCAGCA +
Preference number: 3 (lower is better)
Translates to: NCLLPKCSPQHQ*QRYSISLSTAA
Trigger: TGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 72 bp CCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTaGTCCAGGTTTCCCAAGTCAACAAAGTATACTCAG +
Preference number: 3 (lower is better)
Translates to: PHLHASLTNQRK*SRFPKSTKYTQ
Trigger: CTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR CCA 72 bp CCAAGTGGTCCTGATTATCTACCACAGTCCCAATTGTaGAACTGTGGTGGTCTCAATTTCTGGAAAGTAATC +
Preference number: 3 (lower is better)
Translates to: PSGPDYLPQSQL*NCGGLNFWKVI
Trigger: GATTACTTTCCAGAAATTGAGACCACCACAGTTCCACAATTGGGACTGTGGTAGATAATCAGGACCACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR-3UTR CAA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGAGCCCCAATAACGAGTTaGAGGCTTAGATTAGTTGCA +
Preference number: 3 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRAPITS*RLRLVA
Trigger: TGCAACTAATCTAAGCCTCAAACTCGTTATTGGGGC...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 72 bp CATGTGTTTTCAGGATGTTTCTTGGACATGCATGTGTaGCAGTCACTTCATGGTTCTACTTCCCATAAGCAG +
Preference number: 3 (lower is better)
Translates to: HVFSGCFLDMHV*QSLHGSTSHKQ
Trigger: CTGCTTATGGGAAGTAGAACCATGAAGTGACTGTCACACATGCATGTCCAAGAAACATCCTGAAAACACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 72 bp TACGACTTCATGTGTTTTCAGGATGTTTCTTGGACATaGATGTGTGACAGTCACTTCATGGTTCTACTTCCC +
Preference number: 3 (lower is better)
Translates to: YDFMCFQDVSWT*MCDSHFMVLLP
Trigger: GGGAAGTAGAACCATGAAGTGACTGTCACACATGCATGTCCAAGAAACATCCTGAAAACACATGAAGTCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 72 bp GCACCAATGACAAAGATATTCCATCTCCTTGAGCACTaGAGCAGTTTAAGATTTTGTAGAGCTACTACTGGG +
Preference number: 3 (lower is better)
Translates to: APMTKIFHLLEH*SSLRFCRATTG
Trigger: CCCAGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CAA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCTATTTCCTTATCCCTTaGACAGCATCTCTACAATCT +
Preference number: 3 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFYFLIP*TASLQS
Trigger: AGATTGTAGAGATGCTGTCAAAGGGATAAGGAAATA...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR CCA 72 bp CCAGTTTACGACTTCATGTGTTTTCAGGATGTTTCTTaGACATGCATGTGTGACAGTCACTTCATGGTTCTA +
Preference number: 3 (lower is better)
Translates to: PVYDFMCFQDVS*TCMCDSHFMVL
Trigger: TAGAACCATGAAGTGACTGTCACACATGCATGTCCAAGAAACATCCTGAAAACACATGAAGTCGTAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 72 bp ACTCTTCTACAACGAAACCTTCAAATATTGCCAACCTaGAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCC +
Preference number: 3 (lower is better)
Translates to: TLLQRNLQILPT*SFQHKVLYFKS
Trigger: GGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 72 bp AGATGCTCATGCTGCTCACTTCAATTGCATATGATTTaGGAATGGGACATTCGGGAATTTAAATCTTTGAGA +
Preference number: 3 (lower is better)
Translates to: RCSCCSLQLHMI*EWDIREFKSLR
Trigger: TCTCAAAGATTTAAATTCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 72 bp TTTTTCCTAGGCTCTATGACTAATAGCTTTCATATTTaGGGCCTACAAGAGCAAATGGCAATGTTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: FFLGSMTNSFHI*GLQEQMAMFCV
Trigger: AACACAGAACATTGCCATTTGCTCTTGTAGGCCTCAAATATGAAAGCTATTAGTCATAGAGCCTAGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR TCA 72 bp CCCAAGTCAACAAAGTATACTCAGTTACACTTTCCCTaGTCATACTATGAATTGAAACAGAACACTCCTTTG +
Preference number: 3 (lower is better)
Translates to: PKSTKYTQLHFP*SYYELKQNTPL
Trigger: CAAAGGAGTGTTCTGTTTCAATTCATAGTATGATCAGGGAAAGTGTAACTGAGTATACTTTGTTGACTTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CAA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGACTTTGCCGAACTGAGTaGTTCTACACCAAGAAAAAT +
Preference number: 3 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRLCRTE*FYTKKN
Trigger: ATTTTTCTTGGTGTAGAACAACTCAGTTCGGCAAAG...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR-3UTR CAA 90 bp CAATCTTTAGCCAGGAGACTGAGAGATCTTTACTATGATTTTGAGAGTAAAAACTATTTCCTTATCCCTTaGACAGCATCTCTACAATCT +
Preference number: 3 (lower is better)
Translates to: QSLARRLRDLYYDFESKNYFLIP*TASLQS
Trigger: AGATTGTAGAGATGCTGTCAAAGGGATAAGGAAATA...GTTTTTACTCTCAAAATCATAGTAAAGATCTCTCAGTCTCCTGGCTAAAGATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR GCA 72 bp AATGTTAAACTCTTCTACAACGAAACCTTCAAATATTaGCAACCTGAAGTTTTCAGCACAAGGTGTTGTATT +
Preference number: 3 (lower is better)
Translates to: NVKLFYNETFKY*QPEVFSTRCCI
Trigger: AATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGAGTTTAACATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR CCA 72 bp AAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATaGGGGCAATTATCTATAATGAGATTAAGAATATTC +
Preference number: 3 (lower is better)
Translates to: KFSAQGVVFQVP*GQLSIMRLRIF
Trigger: GAATATTCTTAATCTCATTATAGATAATTGCCCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTCACCGCCCCTGTCAGTaGCAACCGCCGGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LETTSGATCICQLPTQPTHRPCQ*QPPAPP
Trigger: TGGAGGCGCCGGCGGTTGGCACTGACAGGGGCGGTG...AGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp TTCTGGCCCAGTAGAAAGAGGAAACACGAAGATAATCTCTGCTGTAGAGCTGCTCCTCTTCTGCCAGGCTaGGGGCGCACAGGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FWPSRKRKHEDNLCCRAAPLLPG*GRTGSA
Trigger: GGCGGAGCCTGTGCGCCCGCAGCCTGGCAGAAGAGG...AGCAGCTCTACAGCAGAGATTATCTTCGTGTTTCCTCTTTCTACTGGGCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCCGCGCCCCGCCTCACTaGGGGCAGACGCACCGGCTG +
Preference number: 4 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSRAPPH*GQTHRL
Trigger: CAGCCGGTGCGTCTGCCCTCAGTGAGGCGGGGCGCG...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp GTAACGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTGCTCCTCCGCCATGCGGGTTaGGGGCACGAAGCAAGGGCG +
Preference number: 4 (lower is better)
Translates to: VTSASTSACFVNQPKKVLLRHAG*GHEARA
Trigger: CGCCCTTGCTTCGTGCCCTCAACCCGCATGGCGGAG...GAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440469.1
CDS-3UTR GCA 90 bp CCTCAAGTTTGCAACCCTTTCCTTCCTGCTTCACTGGGACTAGAACAGAATTTCCCAGCGGCTCCGCCATaGGGGTTGAGGGCACGAAGC +
Preference number: 4 (lower is better)
Translates to: PQVCNPFLPASLGLEQNFPAAPP*GLRARS
Trigger: GCTTCGTGCCCTCAACCCGCATGGCGGAGCCGCTGG...GAAATTCTGTTCTAGTCCCAGTGAAGCAGGAAGGAAAGGGTTGCAAACTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp ATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTGCAACCCTGAGCCACCACACTTCCCATaGATGGCGGCCCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: IGCNMHMSTAHSTNCNPEPPHFP*MAALTE
Trigger: TTCAGTGAGGGCCGCCATGCATGGGAAGTGTGGTGG...CTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TTAACTCCCAAGGAGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATGCACCATCAGTGCTCTaGGCAATGGGGTTTCGATGT +
Preference number: 4 (lower is better)
Translates to: LTPKEQSKNPGQLLGVPNAPSVL*AMGFRC
Trigger: ACATCGAAACCCCATTGCTCAGAGCACTGATGGTGC...ATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCTCCTTGGGAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGCCAGCGGCTCCGCCATaGGGGTTGAGGGCACGAAGC +
Preference number: 4 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKPAAPP*GLRARS
Trigger: GCTTCGTGCCCTCAACCCGCATGGCGGAGCCGCTGG...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTGCGCAGAGCCTCTTCTaGCAGGCTGCGGGCGCACAG +
Preference number: 4 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLAQSLF*QAAGAQ
Trigger: CTGTGCGCCCGCAGCCTGGCAGAAGAGGCTCTGCGC...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGAAGGCAGCGGTACCAGTaGTTGCACACCAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGRQRYQ*LHTRAQ
Trigger: CTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCT...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp TTACACTCAATCTTCAGGCGCAACTGTCTTCTACCGAAATGCTCTCCTCAGCACCGAGGTGGGTGGTGTTaGCCAGGAGTTCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: LHSIFRRNCLLPKCSPQHRGGWC*PGVQDQ
Trigger: CTGGTCTTGAACTCCTGGCCAACACCACCCACCTCG...GTGCTGAGGAGAGCATTTCGGTAGAAGACAGTTGCGCCTGAAGATTGAGTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTAAAGCACGTATCGGCTaGAGGGGCGTCCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLKARIG*RGVLRP
Trigger: GGGGCGGAGGACGCCCCTGCAGCCGATACGTGCTTT...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440469.1
CDS-3UTR CCA 90 bp CTTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACAACCTTGGCACTGCATaGGGGCCCGTTTTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LRDNIGCNMHMSTAHSTNNLGTA*GPVLWQ
Trigger: TTGCCACAAAACGGGCCCCCATGCAGTGCCAAGGTT...GTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TTAACTCCCAAGGAGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATTTGGACATGCATGTGTaGCAGTCACTTCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: LTPKEQSKNPGQLLGVPNLDMHV*QSLHGS
Trigger: AGAACCATGAAGTGACTGTCACACATGCATGTCCAA...ATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCTCCTTGGGAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CCTCAAGTTTGCAACCCTTTCCTTCCTGCTTCACTGGGACTAGAACAGAATTTCAGAATCCCGGCCAGCTaGTGGGTGTCCCTAATCAGA +
Preference number: 4 (lower is better)
Translates to: PQVCNPFLPASLGLEQNFRIPAS*WVSLIR
Trigger: TCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCT...GAAATTCTGTTCTAGTCCCAGTGAAGCAGGAAGGAAAGGGTTGCAAACTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCAGAATCCCGGCCAGCTaGTGGGTGTCCCTAATCAGA +
Preference number: 4 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFRIPAS*WVSLIR
Trigger: TCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCT...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACACCGGGAGGCAAAGGTTaGAGTGAACTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTPGGKG*SELRSH
Trigger: GTGTGATCTCAGTTCACTGCAACCTTTGCCTCCCGG...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACAGTGCTGAAGGCATGTTaGAAAGCACGTATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTVLKAC*KARILA
Trigger: GGCCAAGATACGTGCTTTTCAACATGCCTTCAGCAC...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp ATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTGCAACCCTGAGTCTCCTCAGCACCAATaGCAAAGATATTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: IGCNMHMSTAHSTNCNPESPQHQ*QRYSIS
Trigger: GGAGATGGAATATCTTTGTCATTGGTGCTGAGGAGA...CTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp GTAACGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTGCTCAAGGTTGCAGTGAACTaGGATCACACCACCGCACTC +
Preference number: 4 (lower is better)
Translates to: VTSASTSACFVNQPKKVLKVAVN*DHTTAL
Trigger: GAGTGCGGTGGTGTGATCTCAGTTCACTGCAACCTT...GAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACAGCTTCCAAGTGGTCCTaGTTATCTACCACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTASKWS*LSTTVP
Trigger: TGGGACTGTGGTAGATAATCAGGACCACTTGGAAGC...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp TTAACCTGTTTCAGCTGGGTAAGTAAACGTTTTCTTTATAGCCCCAATAACGAGAGCGGTACCAGTGCTTaGACACCAGGGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTCFSWVSKRFLYSPNNESGTSA*TPGRSS
Trigger: GGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCT...CTCGTTATTGGGGCTATAAAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTTGCACAGGATGTCCGTaGGCAGAGCCTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLCTGCP*AEPLLP
Trigger: TGGCAGAAGAGGCTCTGCGCACGGACATCCTGTGCA...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGACCACCACACTTCCCATaGATGGCGGCCCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRPPHFP*MAALTE
Trigger: TTCAGTGAGGGCCGCCATGCATGGGAAGTGTGGTGG...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TTAACTCCCAAGGAGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATATTTTGGTGCGTTGTTaGACTGTGGAAAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LTPKEQSKNPGQLLGVPNILVRC*TVENCH
Trigger: ATGGCAGTTTTCCACAGTGCAACAACGCACCAAAAT...ATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCTCCTTGGGAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTTCGTGCACTCCAGCCTaGGTGACTCTGTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LETTSGATCICQLPTQPTSCTPA*VTLSPK
Trigger: TTTTGGAGACAGAGTCACGCAGGCTGGAGTGCACGA...AGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp TTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTCTGGGTGGCAAAGGTTaGAGTGAGTCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: LETTSGATCICQLPTQPTLGGKG*SESRSC
Trigger: GCACGATCTTGACTCACTGCAACCTTTGCCACCCAG...AGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp GTAACGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTGCTCGGACAGCATTTGGGCTaGGTGTGGGCTGTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: VTSASTSACFVNQPKKVLGQHLG*VWAVPN
Trigger: ATTAGGAACAGCCCACACCCAGCCCAAATGCTGTCC...GAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGCATGGCGGCCCTCACTaGAACCAATCTTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKHGGPH*NQSWSL
Trigger: CAAGGACCAAGATTGGTTTCAGTGAGGGCCGCCATG...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGAGTGCTGAAGGCATGTTaGAAAGCACGTATCGGCTGC +
Preference number: 4 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGVLKAC*KARIGC
Trigger: GCAGCCGATACGTGCTTTTCAACATGCCTTCAGCAC...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440469.1
CDS-3UTR GCA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGAGCTTCCCGCCGTCTCTaGTCGGAAGGCCAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRASRRL*SEGQAS
Trigger: CGAGGCTTGGCCTTCCGAGCAGAGACGGCGGGAAGC...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCATCACTGCCCAGCAATaGCACATAACCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFITAQQ*HITLAL
Trigger: CAGTGCCAAGGTTATGTGGCATTGCTGGGCAGTGAT...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CTTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACACATCGGGTGCAACATaGATATGTCAACTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LRDNIGCNMHMSTAHSTNTSGAT*ICQLPT
Trigger: AGTGGGCAGTTGACATATGCATGTTGCACCCGATGT...GTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTTTCCAGCCCCAGCTCTaGTCATCACTGCCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLFQPQL*SSLPSN
Trigger: ATTGCTGGGCAGTGATGACCAGAGCTGGGGCTGGAA...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTACTGTTCTCATCGCCGTaGAGGCAGCGGTACCAGTGC +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILLFSSP*RQRYQC
Trigger: GCACTGGTACCGCTGCCTGCACGGCGATGAGAACAG...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTTGTAGCTGGGCAGGTTaGACAGGATGTCCGTGCGCA +
Preference number: 4 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGCSWAG*TGCPCA
Trigger: TGCGCACGGACATCCTGTGCAACCTGCCCAGCTACA...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGTCCTTGCACCATCAGTaGTCTGAGCAATGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGSLHHQ*SEQWGF
Trigger: GAAACCCCATTGCTCAGAGCACTGATGGTGCAAGGA...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTGGCAATTCCAATCACTaGCACAGTGCCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTGNSNH*HSAQRA
Trigger: GGCCCTCTGGGCACTGTGGCAGTGATTGGAATTGCC...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTGGCAATTCCAATCACTaGCACAGTGCCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGGNSNH*HSAQRA
Trigger: GGCCCTCTGGGCACTGTGGCAGTGATTGGAATTGCC...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TTAACTCCCAAGGAGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATTATCTGATATTTTGGTaGGTTGTTGCACTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LTPKEQSKNPGQLLGVPNYLIFW*VVALWK
Trigger: TTTCCACAGTGCAACAACGCACCAAAATATCAGATA...ATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCTCCTTGGGAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CTTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACCACGAAGATAATCTCTaGTGTAGAGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRDNIGCNMHMSTAHSTNHEDNL*CRAASP
Trigger: TGGAGAAGCAGCTCTACAGCAGAGATTATCTTCGTG...GTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TTACACTCAATCTTCAGGCGCAACTGTCTTCTACCGAAATGCTCTCCTCAGCACCCCAGATGCTCATGCTaGTCACTTCAATTGCATATG +
Preference number: 4 (lower is better)
Translates to: LHSIFRRNCLLPKCSPQHPRCSC*SLQLHM
Trigger: CATATGCAATTGAAGTGAGCAGCATGAGCATCTGGG...GTGCTGAGGAGAGCATTTCGGTAGAAGACAGTTGCGCCTGAAGATTGAGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CCTCAAGTTTGCAACCCTTTCCTTCCTGCTTCACTGGGACTAGAACAGAATTTCCAGGAGTTCAAGACCTaGCTAGGCAGTAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: PQVCNPFLPASLGLEQNFQEFKT*LGSRVK
Trigger: TTTCACTCTACTGCCTAGGCAGGTCTTGAACTCCTG...GAAATTCTGTTCTAGTCCCAGTGAAGCAGGAAGGAAAGGGTTGCAAACTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTTCTTGGCCTTGTAGCTaGGCAGGTTGCACAGGATGT +
Preference number: 4 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSSWPCS*AGCTGC
Trigger: ACATCCTGTGCAACCTGCCCAGCTACAAGGCCAAGA...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTATCCCGGCCAGCTGCTaGGTGTCCCTAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSIPASC*VSLIRF
Trigger: AAATCTGATTAGGGACACCCAGCAGCTGGCCGGGAT...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTTTTGAGGACAGCATTTaGGCTGGGTGTGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSFEDSI*AGCGLF
Trigger: GAACAGCCCACACCCAGCCCAAATGCTGTCCTCAAA...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACACTTCCATGTCCAAGATaGCTCGAATTCTTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTLPCPR*LEFFLL
Trigger: TAGGAGAAAGAATTCGAGTCATCTTGGACATGGAAG...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCAGGCAAAGGTTGCAGTaGACTGAGATCACACCACCG +
Preference number: 4 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSRQRLQ*TEITPP
Trigger: CGGTGGTGTGATCTCAGTTCACTGCAACCTTTGCCT...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGACCAATCTTGGTCCTTaGACCATCAGTGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKTNLGP*TISALS
Trigger: GCTCAGAGCACTGATGGTGCAAGGACCAAGATTGGT...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGACATCGGGTGCAACATaGATATGTCAACTGCCCACT +
Preference number: 4 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGTSGAT*ICQLPT
Trigger: AGTGGGCAGTTGACATATGCATGTTGCACCCGATGT...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTAACCTTGGCACTGCATaGGGGCCCGTTTTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTNLGTA*GPVLWQ
Trigger: TTGCCACAAAACGGGCCCCCATGCAGTGCCAAGGTT...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CCTCAAGTTTGCAACCCTTTCCTTCCTGCTTCACTGGGACTAGAACAGAATTTCTGCGTTGTTGCACTGTaGAAAACTGCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: PQVCNPFLPASLGLEQNFCVVAL*KTAIDF
Trigger: GAAGTCAATGGCAGTTTTCCACAGTGCAACAACGCA...GAAATTCTGTTCTAGTCCCAGTGAAGCAGGAAGGAAAGGGTTGCAAACTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACATCCTATCTGATATTTTaGTGCGTTGTTGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTSYLIF*CVVALW
Trigger: CCACAGTGCAACAACGCACCAAAATATCAGATAGGA...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp TTAACTCCCAAGGAGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATTTAACCTGTTTCAGCTaGGTAAGTAAACGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LTPKEQSKNPGQLLGVPNLTCFS*VSKRFL
Trigger: AAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA...ATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCTCCTTGGGAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp ATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTGCAACCCTGAGGTATTTCAAGTCCCATaGGGGCAATTATCTATAATG +
Preference number: 4 (lower is better)
Translates to: IGCNMHMSTAHSTNCNPEVFQVP*GQLSIM
Trigger: CATTATAGATAATTGCCCCCATGGGACTTGAAATAC...CTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CTCACTTTTAGAGAAGTGCAGTCCAGGCAGACCATGCTTCTCAATATATTAAAAATTAGCCAGGTGTGGTaGCACATGCTACTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LTFREVQSRQTMLLNILKISQVW*HMLLGR
Trigger: CCTCCCGAGTAGCATGTGCCACCACACCTGGCTAAT...TTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTGCACCATCAGTGCTCTaGGCAATGGGGTTTCGATGT +
Preference number: 4 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGAPSVL*AMGFRC
Trigger: ACATCGAAACCCCATTGCTCAGAGCACTGATGGTGC...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGGATATTCCATCTCCTTaGGCACTGCAGCAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGDIPSP*ALQQFK
Trigger: CTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATC...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp CTTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTCCAACATTCCAAAGTaGCTACAAAGTGTATACAGC +
Preference number: 4 (lower is better)
Translates to: LRDNIGCNMHMSTAHSTNSNIPK*LQSVYS
Trigger: GCTGTATACACTTTGTAGTCACTTTGGAATGTTGGA...GTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTACTGAGGAATGTTTTTaGGGACAGCATTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSTEECF*GQHLGW
Trigger: CCAGCCCAAATGCTGTCCTCAAAAACATTCCTCAGT...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTATCACTGCCCAGCAATaGCACATAACCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLITAQQ*HITLAL
Trigger: CAGTGCCAAGGTTATGTGGCATTGCTGGGCAGTGAT...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTAGCTCTGGTCATCACTaGCCAGCAATGCCACATAAC +
Preference number: 4 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLSSGHH*PAMPHN
Trigger: GTTATGTGGCATTGCTGGGCAGTGATGACCAGAGCT...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGCACGAAGATAATCTCTaGTGTAGAGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGHEDNL*CRAASP
Trigger: TGGAGAAGCAGCTCTACAGCAGAGATTATCTTCGTG...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATCACTTTTAGAGAAGTaGAGTCCAGGCAGACCATGC +
Preference number: 4 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRSLLEK*SPGRPC
Trigger: GCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGA...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGCCCAGATGCTCATGCTaGTCACTTCAATTGCATATG +
Preference number: 4 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGPRCSC*SLQLHM
Trigger: CATATGCAATTGAAGTGAGCAGCATGAGCATCTGGG...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGAACCAACCAAAGAAAGTaGTCCAGGTTTCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGTNQRK*SRFPKS
Trigger: TGACTTGGGAAACCTGGAGCACTTTCTTTGGTTGGT...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CTTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACCAGGCAGTTGTAAAATaGGATCAGTCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: LRDNIGCNMHMSTAHSTNQAVVK*DQSSQT
Trigger: TGTTTGTGAAGACTGATCCCATTTTACAACTGCCTG...GTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp ATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTGCAACCCTGAGTTAACCTGTTTCAGCTaGGTAAGTAAACGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IGCNMHMSTAHSTNCNPELTCFS*VSKRFL
Trigger: AAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA...CTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTATCCCGGCCAGCTGCTaGGTGTCCCTAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGIPASC*VSLIRF
Trigger: AAATCTGATTAGGGACACCCAGCAGCTGGCCGGGAT...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCTTGAGTAGAGGGGAGTaGCTAAATGCATTCACAGTA +
Preference number: 4 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFLSRGE*LNAFTV
Trigger: TACTGTGAATGCATTTAGCCACTCCCCTCTACTCAA...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR CAA 72 bp CTTCCAAGTGGTCCTGATTATCTACCACAGTCCCAATaGTGGAACTGTGGTGGTCTCAATTTCTGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LPSGPDYLPQSQ*WNCGGLNFWKV
Trigger: TACTTTCCAGAAATTGAGACCACCACAGTTCCACAATTGGGACTGTGGTAGATAATCAGGACCACTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTTCTTTGTTCTATGGCTaGAATCCCTTGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLSLFYG*NPLLHR
Trigger: CCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGA...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TTCTGGCCCAGTAGAAAGAGGAAACACGAAGATAATCTCTGCTGTAGAGCTGCTTCCAACATTCCAAAGTaGCTACAAAGTGTATACAGC +
Preference number: 4 (lower is better)
Translates to: FWPSRKRKHEDNLCCRAASNIPK*LQSVYS
Trigger: GCTGTATACACTTTGTAGTCACTTTGGAATGTTGGA...AGCAGCTCTACAGCAGAGATTATCTTCGTGTTTCCTCTTTCTACTGGGCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACAACCTTGGCAGCATATTaGAATGACCAGAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTTLAAY*NDQKVF
Trigger: AAAAACTTTCTGGTCATTTCAATATGCTGCCAAGGT...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TTCTGGCCCAGTAGAAAGAGGAAACACGAAGATAATCTCTGCTGTAGAGCTGCTTCCCTGATCATACTATaGATTGAAACAGAACACTCC +
Preference number: 4 (lower is better)
Translates to: FWPSRKRKHEDNLCCRAASLIIL*IETEHS
Trigger: GGAGTGTTCTGTTTCAATTCATAGTATGATCAGGGA...AGCAGCTCTACAGCAGAGATTATCTTCGTGTTTCCTCTTTCTACTGGGCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CTCACTTTTAGAGAAGTGCAGTCCAGGCAGACCATGCTTCTCAATATATTAAAAACCAATCTTGGTCCTTaGACCATCAGTGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LTFREVQSRQTMLLNILKTNLGP*TISALS
Trigger: GCTCAGAGCACTGATGGTGCAAGGACCAAGATTGGT...TTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGGATGTTTCTTGGACATaGATGTGTGACAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGDVSWT*MCDSHF
Trigger: GAAGTGACTGTCACACATGCATGTCCAAGAAACATC...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTCATGCATATGTCAACTaGCCACTCAACCAACTGCAA +
Preference number: 4 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLHAYVN*PLNQLQ
Trigger: TTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATG...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCCAATTGCATATGATTTaGGAATGGGACATTCGGGAA +
Preference number: 4 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFQLHMI*EWDIRE
Trigger: TTCCCGAATGTCCCATTCGCAAATCATATGCAATTG...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCCAACCCTTTCCTTCCTaGTTCACTGGGACTAGAACA +
Preference number: 4 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSQPFPS*FTGTRT
Trigger: TGTTCTAGTCCCAGTGAAGCAGGAAGGAAAGGGTTG...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR GCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCTACCAGCCTCAAGTTTaGAACCCTTTCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSYQPQV*NPFLPA
Trigger: AGCAGGAAGGAAAGGGTTGCAAACTTGAGGCTGGTA...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp TTCTGGCCCAGTAGAAAGAGGAAACACGAAGATAATCTCTGCTGTAGAGCTGCTTTTCAGGATGTTTCTTaGACATGCATGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: FWPSRKRKHEDNLCCRAAFQDVS*TCMCDS
Trigger: ACTGTCACACATGCATGTCCAAGAAACATCCTGAAA...AGCAGCTCTACAGCAGAGATTATCTTCGTGTTTCCTCTTTCTACTGGGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGAAGTGGTTCTCAACCTTaGCAGCATATTGAAATGACC +
Preference number: 4 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGSGSQP*QHIEMT
Trigger: GGTCATTTCAATATGCTGCCAAGGTTGAGAACCACT...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTCATTTGGGCTGGGTGTaGGCTGTTCCTAATAAAGGC +
Preference number: 4 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGHLGWV*AVPNKG
Trigger: GCCTTTATTAGGAACAGCCCACACCCAGCCCAAATG...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
3UTR CAA 72 bp TTCACAGTAATTATTTCTTCCTTACCAGCCTCAAGTTaGCAACCCTTTCCTTCCTGCTTCACTGGGACTAGA +
Preference number: 4 (lower is better)
Translates to: FTVIISSLPASS*QPFPSCFTGTR
Trigger: TCTAGTCCCAGTGAAGCAGGAAGGAAAGGGTTGCAAACTTGAGGCTGGTAAGGAAGAAATAATTACTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGAGTGGAAAACTGCCATTaGCTTCTCCATTATGTAGTA +
Preference number: 4 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGVENCH*LLHYVV
Trigger: TACTACATAATGGAGAAGTCAATGGCAGTTTTCCAC...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACTATTCTTTCTCCTATCTaGTATTTTGGTGCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LETTSGATCICQLPTQPTILSPI*YFGALL
Trigger: CAACAACGCACCAAAATATCAGATAGGAGAAAGAAT...AGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGACTTCCATGTCCAAGATaGCTCGAATTCTTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRLPCPR*LEFFLL
Trigger: TAGGAGAAAGAATTCGAGTCATCTTGGACATGGAAG...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGCAAATATTGCCAACCTaGAGTTTTCAGCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKQILPT*SFQHKV
Trigger: CACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTG...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGACACTTCAATTGCATATaGTTTGCGAATGGGACATTC +
Preference number: 4 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGHFNCI*FANGTF
Trigger: GAATGTCCCATTCGCAAATCATATGCAATTGAAGTG...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp GTAACGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTGCTCACCTTGGCAGCATATTaGAATGACCAGAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: VTSASTSACFVNQPKKVLTLAAY*NDQKVF
Trigger: AAAAACTTTCTGGTCATTTCAATATGCTGCCAAGGT...GAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTATCCTTGCACCATCAGTaGTCTGAGCAATGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILSLHHQ*SEQWGF
Trigger: GAAACCCCATTGCTCAGAGCACTGATGGTGCAAGGA...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCGAAACCTTCAAATATTaGCAACCTGAAGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFETFKY*QPEVFS
Trigger: GCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTC...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCACCAACCAAAGAAAGTaGTCCAGGTTTCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSTNQRK*SRFPKS
Trigger: TGACTTGGGAAACCTGGAGCACTTTCTTTGGTTGGT...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAGAAAAGCACGTATCTTaGCCTTGTAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILEKHVS*PCSWAG
Trigger: ACCTGCCCAGCTACAAGGCCAAGATACGTGCTTTTC...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTTCCTATCTGATATTTTaGTGCGTTGTTGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSSYLIF*CVVALW
Trigger: CCACAGTGCAACAACGCACCAAAATATCAGATAGGA...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR CAA 72 bp TGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATaGACAATCTTAACTCCCAAGGAGCAATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: CSMAEIPCFTGV*TILTPKEQSKN
Trigger: ATTCTTGGATTGCTCCTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
3UTR CAA 72 bp ACAAAGTGTATACAGCCAACACTGAGAACCACTGGTTaGAATGATTTACACTCAATCTTCAGGCGCAACTGT +
Preference number: 4 (lower is better)
Translates to: TKCIQPTLRTTG*NDLHSIFRRNC
Trigger: ACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAGTGTTGGCTGTATACACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTCAATGTTCTGTGTTATaGGACACTTTCTTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSQCSVL*DTFLEG
Trigger: GCCTTCTAAGAAAGTGTCTCATAACACAGAACATTG...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTCAAATATTGCCAACCTaGAGTTTTCAGCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLQILPT*SFQHKV
Trigger: CACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTG...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TTAACCTGTTTCAGCTGGGTAAGTAAACGTTTTCTTTATAGCCCCAATAACGAGTCTTTGTTCTATGGCTaGAATCCCTTGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LTCFSWVSKRFLYSPNNESLFYG*NPLLHR
Trigger: CCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGA...CTCGTTATTGGGGCTATAAAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGAAGCTCTGGTCATCACTaGCCAGCAATGCCACATAAC +
Preference number: 4 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRSSGHH*PAMPHN
Trigger: GTTATGTGGCATTGCTGGGCAGTGATGACCAGAGCT...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CTCACTTTTAGAGAAGTGCAGTCCAGGCAGACCATGCTTCTCAATATATTAAAACATGCATATGTCAACTaGCCACTCAACCAACTGCAA +
Preference number: 4 (lower is better)
Translates to: LTFREVQSRQTMLLNILKHAYVN*PLNQLQ
Trigger: TTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATG...TTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTGCTTCCACATCTGCATaGTTCGTTAACCAACCAAAG +
Preference number: 4 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTASTSA*FVNQPK
Trigger: CTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGC...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CTCACTTTTAGAGAAGTGCAGTCCAGGCAGACCATGCTTCTCAATATATTAAAATGCGTTGTTGCACTGTaGAAAACTGCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: LTFREVQSRQTMLLNILKCVVAL*KTAIDF
Trigger: GAAGTCAATGGCAGTTTTCCACAGTGCAACAACGCA...TTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGTTTCAGGATGTTTCTTaGACATGCATGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKFQDVS*TCMCDS
Trigger: ACTGTCACACATGCATGTCCAAGAAACATCCTGAAA...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CAAATTTACGTAAATGAAGGCCCTCATGACCCAGATGCTCATGCTGCTCACTTCAACTCTCAGCTCATGTaGGTTGGATTATTAATTCAA +
Preference number: 4 (lower is better)
Translates to: QIYVNEGPHDPDAHAAHFNSQLM*VGLLIQ
Trigger: TTGAATTAATAATCCAACCCACATGAGCTGAGAGTT...GAAGTGAGCAGCATGAGCATCTGGGTCATGAGGGCCTTCATTTACGTAAATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTCAACAAAATTCGGAATaGCCACATCACAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLQQNSE*PHHNLK
Trigger: TTTCAGGTTGTGATGTGGCCATTCCGAATTTTGTTG...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGATTGTGGAACTGTGGTaGTCTCAATTTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKIVELW*SQFLES
Trigger: ACTTTCCAGAAATTGAGACCACCACAGTTCCACAAT...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTACCACAGTCCCAATTGTaGAACTGTGGTGGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILPQSQL*NCGGLN
Trigger: ATTGAGACCACCACAGTTCCACAATTGGGACTGTGG...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp CTCACTTTTAGAGAAGTGCAGTCCAGGCAGACCATGCTTCTCAATATATTAAAATGGGCTTACATGTTGTaGCACAAAGATGAGTCCGTT +
Preference number: 4 (lower is better)
Translates to: LTFREVQSRQTMLLNILKWAYML*HKDESV
Trigger: AACGGACTCATCTTTGTGCCACAACATGTAAGCCCA...TTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTAATAGCTTTCATATTTaGGGCCTACAAGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLNSFHI*GLQEQM
Trigger: CATTTGCTCTTGTAGGCCTCAAATATGAAAGCTATT...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTCACTTCAATTGCATATaGTTTGCGAATGGGACATTC +
Preference number: 4 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLHFNCI*FANGTF
Trigger: GAATGTCCCATTCGCAAATCATATGCAATTGAAGTG...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTATCTCCTCAGCACCAATaGCAAAGATATTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILSPQHQ*QRYSIS
Trigger: GGAGATGGAATATCTTTGTCATTGGTGCTGAGGAGA...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGAAACCACTGGTTTGAATaGTTTACACTCAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRNHWFE*FTLNLQ
Trigger: CTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTT...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTGATGTTTCTTGGACATaGATGTGTGACAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGDVSWT*MCDSHF
Trigger: GAAGTGACTGTCACACATGCATGTCCAAGAAACATC...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CTCACTTTTAGAGAAGTGCAGTCCAGGCAGACCATGCTTCTCAATATATTAAAAAGAGACAACATCGGGTaGAACATGCATATGTCAACT +
Preference number: 4 (lower is better)
Translates to: LTFREVQSRQTMLLNILKRDNIG*NMHMST
Trigger: AGTTGACATATGCATGTTGCACCCGATGTTGTCTCT...TTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCAAATATGTGAGCACCTaGCTATTGGGCTTACATGTT +
Preference number: 4 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSKYVST*LLGLHV
Trigger: AACATGTAAGCCCAATAGGCAGGTGCTCACATATTT...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCCAGGCAGTTGTAAAATaGGATCAGTCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSQAVVK*DQSSQT
Trigger: TGTTTGTGAAGACTGATCCCATTTTACAACTGCCTG...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGGTATTTCAAGTCCCATaGGGGCAATTATCTATAATG +
Preference number: 4 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKVFQVP*GQLSIM
Trigger: CATTATAGATAATTGCCCCCATGGGACTTGAAATAC...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCCAACAAAATTCGGAATaGCCACATCACAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSQQNSE*PHHNLK
Trigger: TTTCAGGTTGTGATGTGGCCATTCCGAATTTTGTTG...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CTCACTTTTAGAGAAGTGCAGTCCAGGCAGACCATGCTTCTCAATATATTAAAAAGTGGTTCTCAACCTTaGCAGCATATTGAAATGACC +
Preference number: 4 (lower is better)
Translates to: LTFREVQSRQTMLLNILKSGSQP*QHIEMT
Trigger: GGTCATTTCAATATGCTGCCAAGGTTGAGAACCACT...TTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp CAATCTTTAGCCAGGAGACTGAGAGATCTTTACTATGATTTTGAGAGTAAAAACTTGGACATGCATGTGTaGCAGTCACTTCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: QSLARRLRDLYYDFESKNLDMHV*QSLHGS
Trigger: AGAACCATGAAGTGACTGTCACACATGCATGTCCAA...GTTTTTACTCTCAAAATCATAGTAAAGATCTCTCAGTCTCCTGGCTAAAGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTCAATGTTCTGTGTTATaGGACACTTTCTTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTQCSVL*DTFLEG
Trigger: GCCTTCTAAGAAAGTGTCTCATAACACAGAACATTG...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTAACCACTGGTTTGAATaGTTTACACTCAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLNHWFE*FTLNLQ
Trigger: CTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTT...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTTCCCTGATCATACTATaGATTGAAACAGAACACTCC +
Preference number: 4 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTSLIIL*IETEHS
Trigger: GGAGTGTTCTGTTTCAATTCATAGTATGATCAGGGA...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAATTTTGGTGCGTTGTTaGACTGTGGAAAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILILVRC*TVENCH
Trigger: ATGGCAGTTTTCCACAGTGCAACAACGCACCAAAAT...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAAGAGACAACATCGGGTaGAACATGCATATGTCAACT +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILRDNIG*NMHMST
Trigger: AGTTGACATATGCATGTTGCACCCGATGTTGTCTCT...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CAATCTTTAGCCAGGAGACTGAGAGATCTTTACTATGATTTTGAGAGTAAAAACGCTTCCACATCTGCATaGTTCGTTAACCAACCAAAG +
Preference number: 4 (lower is better)
Translates to: QSLARRLRDLYYDFESKNASTSA*FVNQPK
Trigger: CTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGC...GTTTTTACTCTCAAAATCATAGTAAAGATCTCTCAGTCTCCTGGCTAAAGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTTCAGCTCATGTGGGTTaGATTATTAATTCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSSAHVG*IINSKA
Trigger: TGCTTTTGAATTAATAATCCAACCCACATGAGCTGA...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGAAACTCTCAGCTCATGTaGGTTGGATTATTAATTCAA +
Preference number: 4 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRNSQLM*VGLLIQ
Trigger: TTGAATTAATAATCCAACCCACATGAGCTGAGAGTT...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp TCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAACTCCCAAGCATATGATTTGCGAATaGGACATTCGGGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: SMAEIPCFTGVLTILTPKHMICE*DIREFK
Trigger: TTTAAATTCCCGAATGTCCCATTCGCAAATCATATG...CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTGTAGTAGTTTCTTTATaGTTTAGGGCTCTGCTATTT +
Preference number: 4 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSVVVSL*FRALLF
Trigger: AAATAGCAGAGCCCTAAACCATAAAGAAACTACTAC...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTAATAGCTTTCATATTTaGGGCCTACAAGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGNSFHI*GLQEQM
Trigger: CATTTGCTCTTGTAGGCCTCAAATATGAAAGCTATT...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp TTAACCTGTTTCAGCTGGGTAAGTAAACGTTTTCTTTATAGCCCCAATAACGAGAGGGGAGTGGCTAAATaGATTCACAGTAATTATTTC +
Preference number: 4 (lower is better)
Translates to: LTCFSWVSKRFLYSPNNERGVAK*IHSNYF
Trigger: GAAATAATTACTGTGAATGCATTTAGCCACTCCCCT...CTCGTTATTGGGGCTATAAAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR TCA 90 bp CAGAAAGTTTTTAAAAATCCTTATGACCAGCTCATATTCCAGACCAACATCAGAGTGGAAAACTGCCATTaGCTTCTCCATTATGTAGTA +
Preference number: 4 (lower is better)
Translates to: QKVFKNPYDQLIFQTNIRVENCH*LLHYVV
Trigger: TACTACATAATGGAGAAGTCAATGGCAGTTTTCCAC...TCTGATGTTGGTCTGGAATATGAGCTGGTCATAAGGATTTTTAAAAACTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAGAAACCTTCAAATATTaGCAACCTGAAGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILETFKY*QPEVFS
Trigger: GCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTC...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp ATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATTTTGTAGAGCTACTACTTCAGCTCATGTGGGTTaGATTATTAATTCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: IFHLLEHCSSLRFCRATTSAHVG*IINSKA
Trigger: TGCTTTTGAATTAATAATCCAACCCACATGAGCTGA...AGTAGTAGCTCTACAAAATCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp CTCACTTTTAGAGAAGTGCAGTCCAGGCAGACCATGCTTCTCAATATATTAAAAGGTTTCTTCTTAACCTaGACATCGAAAAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: LTFREVQSRQTMLLNILKGFFLT*TSKRIF
Trigger: AAAGATTCTTTTCGATGTCCAGGTTAAGAAGAAACC...TTTTAATATATTGAGAAGCATGGTCTGCCTGGACTGCACTTCTCTAAAAGTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR TCA 90 bp CAATCTTTAGCCAGGAGACTGAGAGATCTTTACTATGATTTTGAGAGTAAAAACATTCTTTCTCCTATCTaGTATTTTGGTGCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: QSLARRLRDLYYDFESKNILSPI*YFGALL
Trigger: CAACAACGCACCAAAATATCAGATAGGAGAAAGAAT...GTTTTTACTCTCAAAATCATAGTAAAGATCTCTCAGTCTCCTGGCTAAAGATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR GCA 90 bp CAATCTTTAGCCAGGAGACTGAGAGATCTTTACTATGATTTTGAGAGTAAAAACTATCTGATATTTTGGTaGGTTGTTGCACTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: QSLARRLRDLYYDFESKNYLIFW*VVALWK
Trigger: TTTCCACAGTGCAACAACGCACCAAAATATCAGATA...GTTTTTACTCTCAAAATCATAGTAAAGATCTCTCAGTCTCCTGGCTAAAGATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAGGTTTCTTCTTAACCTaGACATCGAAAAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILGFFLT*TSKRIF
Trigger: AAAGATTCTTTTCGATGTCCAGGTTAAGAAGAAACC...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CCA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTACATATGATTTGCGAATaGGACATTCGGGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILHMICE*DIREFK
Trigger: TTTAAATTCCCGAATGTCCCATTCGCAAATCATATG...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS GCA 90 bp GCCCGACTCGCCCGGCCTCTCCGCGGCGCGCCAGCGGCTCCGCCATaGGGGTTGAGGGCACGAAGCAAGGGCGCACGCCCAGCTCGTTCG +
Preference number: 5 (lower is better)
Translates to: ARLARPLRGAPAAPP*GLRARSKGARPARS
Trigger: CGAACGAGCTGGGCGTGCGCCCTTGCTTCGTGCCCTCAACCCGCATGGCGGAGCCGCTGGCGCGCCGCGGAGAGGCCGGGCGAGTCGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440469.1
CDS TCA 90 bp TCGCCCGGCCTCTCCGCGGCGCGCCAGCGGCTCCGCCATGCGGGTTaGGGGCACGAAGCAAGGGCGCACGCCCAGCTCGTTCGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: SPGLSAARQRLRHAG*GHEARAHAQLVRGS
Trigger: GGAACCGCGAACGAGCTGGGCGTGCGCCCTTGCTTCGTGCCCTCAACCCGCATGGCGGAGCCGCTGGCGCGCCGCGGAGAGGCCGGGCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440469.1
CDS GCA 90 bp CTGCGGGCGCACAGGCTCCGCCACACCTCGCTGTTCTCATCGCCGTaGAGGCAGCGGTACCAGTGCTTGCACACCAGGGCGCAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: LRAHRLRHTSLFSSP*RQRYQCLHTRAQLR
Trigger: GCGGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTGCACGGCGATGAGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 90 bp CGCCACACCTCGCTGTTCTCATCGCCGTGCAGGCAGCGGTACCAGTaGTTGCACACCAGGGCGCAGCTCCGCAGCTCGGACAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RHTSLFSSPCRQRYQ*LHTRAQLRSSDSSR
Trigger: CCTGGAGCTGTCCGAGCTGCGGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTGCACGGCGATGAGAACAGCGAGGTGTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 90 bp GCAGGTTGCACAGGATGTCCGTGCGCAGAGCCTCTTCTGCCAGGCTaGGGGCGCACAGGCTCCGCCACACCTCGCTGTTCTCATCGCCGT +
Preference number: 5 (lower is better)
Translates to: AGCTGCPCAEPLLPG*GRTGSATPRCSHRR
Trigger: ACGGCGATGAGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAGCCTGGCAGAAGAGGCTCTGCGCACGGACATCCTGTGCAACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 90 bp GTAGCTGGGCAGGTTGCACAGGATGTCCGTGCGCAGAGCCTCTTCTaGCAGGCTGCGGGCGCACAGGCTCCGCCACACCTCGCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: VAGQVAQDVRAQSLF*QAAGAQAPPHLAVL
Trigger: GAGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAGCCTGGCAGAAGAGGCTCTGCGCACGGACATCCTGTGCAACCTGCCCAGCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 90 bp CACGTATCTTGGCCTTGTAGCTGGGCAGGTTGCACAGGATGTCCGTaGGCAGAGCCTCTTCTGCCAGGCTGCGGGCGCACAGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: HVSWPCSWAGCTGCP*AEPLLPGCGRTGSA
Trigger: GGCGGAGCCTGTGCGCCCGCAGCCTGGCAGAAGAGGCTCTGCGCACGGACATCCTGTGCAACCTGCCCAGCTACAAGGCCAAGATACGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 90 bp ACACCTCGCTGTTCTCATCGCCGTGCAGGCAGCGGTACCAGTGCTTaGACACCAGGGCGCAGCTCCGCAGCTCGGACAGCTCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: TPRCSHRRAGSGTSA*TPGRSSAARTAPGK
Trigger: CTTACCTGGAGCTGTCCGAGCTGCGGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTGCACGGCGATGAGAACAGCGAGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 90 bp ACCTTGGCACTGCATGGGGGCCCGTTTTGTGGCAATTCCAATCACTaGCACAGTGCCCAGAGGGCCCTCCCACCACACTTCCCATGCATG +
Preference number: 5 (lower is better)
Translates to: TLALHGGPFCGNSNH*HSAQRALPPHFPCM
Trigger: CATGCATGGGAAGTGTGGTGGGAGGGCCCTCTGGGCACTGTGGCAGTGATTGGAATTGCCACAAAACGGGCCCCCATGCAGTGCCAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS TCA 90 bp CCAGAGGGCCCTCCCACCACACTTCCCATGCATGGCGGCCCTCACTaGAACCAATCTTGGTCCTTGCACCATCAGTGCTCTGAGCAATGG +
Preference number: 5 (lower is better)
Translates to: PEGPPTTLPMHGGPH*NQSWSLHHQCSEQW
Trigger: CCATTGCTCAGAGCACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGAGGGCCGCCATGCATGGGAAGTGTGGTGGGAGGGCCCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS GCA 90 bp AGGCATGTTGAAAAGCACGTATCTTGGCCTTGTAGCTGGGCAGGTTaGACAGGATGTCCGTGCGCAGAGCCTCTTCTGCCAGGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: RHVEKHVSWPCSWAG*TGCPCAEPLLPGCG
Trigger: CCCGCAGCCTGGCAGAAGAGGCTCTGCGCACGGACATCCTGTGCAACCTGCCCAGCTACAAGGCCAAGATACGTGCTTTTCAACATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 90 bp GTAGATTATTGTCCACCAGATTCCAGCCCCAGCTCTGGTCATCACTaGCCAGCAATGCCACATAACCTTGGCACTGCATGGGGGCCCGTT +
Preference number: 5 (lower is better)
Translates to: VDYCPPDSSPSSGHH*PAMPHNLGTAWGPV
Trigger: AACGGGCCCCCATGCAGTGCCAAGGTTATGTGGCATTGCTGGGCAGTGATGACCAGAGCTGGGGCTGGAATCTGGTGGACAATAATCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS CCA 90 bp TCTGGTCATCACTGCCCAGCAATGCCACATAACCTTGGCACTGCATaGGGGCCCGTTTTGTGGCAATTCCAATCACTGCCACAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: SGHHCPAMPHNLGTA*GPVLWQFQSLPQCP
Trigger: TGGGCACTGTGGCAGTGATTGGAATTGCCACAAAACGGGCCCCCATGCAGTGCCAAGGTTATGTGGCATTGCTGGGCAGTGATGACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGAGCTCCGCCATGCGGGTaGAGGGCACGAAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRAPPCG*RARSKG
Trigger: GCCCTTGCTTCGTGCCCTCAACCCGCATGGCGGAGC...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CTTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACGCGAGGTGGGTGGTGTaGGCCAGGAGTTCAAGACCA +
Preference number: 5 (lower is better)
Translates to: LRDNIGCNMHMSTAHSTNARWVV*ARSSRP
Trigger: TGGTCTTGAACTCCTGGCCAACACCACCCACCTCGC...GTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGACAGCGGTACCAGTGCTaGCACACCAGGGCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRQRYQC*HTRAQL
Trigger: GAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTG...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACAGCATGGGGGCCCGTTTaGTGGCAATTCCAATCACTG +
Preference number: 5 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTAWGPV*WQFQSL
Trigger: CAGTGATTGGAATTGCCACAAAACGGGCCCCCATGC...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGACAATGCCACATAACCTaGGCACTGCATGGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRQCHIT*ALHGGP
Trigger: CGGGCCCCCATGCAGTGCCAAGGTTATGTGGCATTG...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CAATCTTTAGCCAGGAGACTGAGAGATCTTTACTATGATTTTGAGAGTAAAAACGCTCCGCCATGCGGGTaGAGGGCACGAAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: QSLARRLRDLYYDFESKNAPPCG*RARSKG
Trigger: GCCCTTGCTTCGTGCCCTCAACCCGCATGGCGGAGC...GTTTTTACTCTCAAAATCATAGTAAAGATCTCTCAGTCTCCTGGCTAAAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TTAACTCCCAAGGAGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATTTATGTAGTAGATTATaGTCCACCAGATTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LTPKEQSKNPGQLLGVPNLCSRL*STRFQP
Trigger: GGGCTGGAATCTGGTGGACAATAATCTACTACATAA...ATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCTCCTTGGGAGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGAGGCACGAGAATTGCTaGAACCTGGGTGGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGRHENC*NLGGKG
Trigger: ACCTTTGCCACCCAGGTTCAAGCAATTCTCGTGCCT...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGAACCAATCTTGGTCCTaGCACCATCAGTGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGNQSWS*HHQCSE
Trigger: CTCAGAGCACTGATGGTGCAAGGACCAAGATTGGTT...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCGCATGGGGGCCCGTTTaGTGGCAATTCCAATCACTG +
Preference number: 5 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSAWGPV*WQFQSL
Trigger: CAGTGATTGGAATTGCCACAAAACGGGCCCCCATGC...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTACAATGCCACATAACCTaGGCACTGCATGGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILQCHIT*ALHGGP
Trigger: CGGGCCCCCATGCAGTGCCAAGGTTATGTGGCATTG...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TTACACTCAATCTTCAGGCGCAACTGTCTTCTACCGAAATGCTCTCCTCAGCACCTCCTATCTGATATTTaGGTGCGTTGTTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LHSIFRRNCLLPKCSPQHLLSDI*VRCCTV
Trigger: CACAGTGCAACAACGCACCAAAATATCAGATAGGAG...GTGCTGAGGAGAGCATTTCGGTAGAAGACAGTTGCGCCTGAAGATTGAGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CTTAGAGACAACATCGGGTGCAACATGCATATGTCAACTGCCCACTCAACCAACGCCCCAATAACGAGTTaGAGGCTTAGATTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: LRDNIGCNMHMSTAHSTNAPITS*RLRLVA
Trigger: TGCAACTAATCTAAGCCTCAAACTCGTTATTGGGGC...GTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCACCCGATGTTGTCTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGACTACCACAGTCCCAATaGTGGAACTGTGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRLPQSQ*WNCGGL
Trigger: GAGACCACCACAGTTCCACAATTGGGACTGTGGTAG...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGATCACTGAAACCAATCTaGGTCCTTGCACCATCAGTG +
Preference number: 5 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGSLKPI*VLAPSV
Trigger: CACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGA...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TTCTGGCCCAGTAGAAAGAGGAAACACGAAGATAATCTCTGCTGTAGAGCTGCTTTTCAGCACAAGGTGTaGTATTTCAAGTCCCATGGG +
Preference number: 5 (lower is better)
Translates to: FWPSRKRKHEDNLCCRAAFQHKV*YFKSHG
Trigger: CCCATGGGACTTGAAATACAACACCTTGTGCTGAAA...AGCAGCTCTACAGCAGAGATTATCTTCGTGTTTCCTCTTTCTACTGGGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACATGCTTCACAGGAGTATaGACAATCTTAACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTCFTGV*TILTPK
Trigger: CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCA...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTGTGAGCACCTGCCTATaGGGCTTACATGTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLVSTCL*GLHVVA
Trigger: TGCCACAACATGTAAGCCCAATAGGCAGGTGCTCAC...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGAAGTGCTGAAGGCATGTaGAAAAGCACGTATCGGCTG +
Preference number: 5 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRSAEGM*KSTYRL
Trigger: CAGCCGATACGTGCTTTTCAACATGCCTTCAGCACT...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440469.1
CDS-3UTR CAA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGTTTCAGCACAAGGTGTaGTATTTCAAGTCCCATGGG +
Preference number: 5 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGFQHKV*YFKSHG
Trigger: CCCATGGGACTTGAAATACAACACCTTGTGCTGAAA...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp AGCAATCCAAGAATCCCGGCCAGCTGCTGGGTGTCCCTAATCAGATTTAAAACACTGAGAACCACTGGTTaGAATGATTTACACTCAATC +
Preference number: 5 (lower is better)
Translates to: SNPRIPASCWVSLIRFKTLRTTG*NDLHSI
Trigger: GATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG...TGTTTTAAATCTGATTAGGGACACCCAGCAGCTGGCCGGGATTCTTGGATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTCTCCTATCTGATATTTaGGTGCGTTGTTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLLLSDI*VRCCTV
Trigger: CACAGTGCAACAACGCACCAAAATATCAGATAGGAG...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp GTAACGTCTGCTTCCACATCTGCATGCTTCGTTAACCAACCAAAGAAAGTGCTCAAAGTCACTTCTGTGTaGCCATATACAGCAGAAACT +
Preference number: 5 (lower is better)
Translates to: VTSASTSACFVNQPKKVLKVTSV*PYTAET
Trigger: AGTTTCTGCTGTATATGGCAACACAGAAGTGACTTT...GAGCACTTTCTTTGGTTGGTTAACGAAGCATGCAGATGTGGAAGCAGACGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTTATTGGGCTTACATGTaGTGGCACAAAGATGAGTCC +
Preference number: 5 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSYWAYM*WHKDES
Trigger: GGACTCATCTTTGTGCCACAACATGTAAGCCCAATA...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTTCACTGAAACCAATCTaGGTCCTTGCACCATCAGTG +
Preference number: 5 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGSLKPI*VLAPSV
Trigger: CACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGA...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp ATGCTCATGCTGCTCACTTCAATTGCATATGATTTGCGAATGGGACATTCGGGAAAAGTCACTTCTGTGTaGCCATATACAGCAGAAACT +
Preference number: 5 (lower is better)
Translates to: MLMLLTSIAYDLRMGHSGKVTSV*PYTAET
Trigger: AGTTTCTGCTGTATATGGCAACACAGAAGTGACTTT...TCCCGAATGTCCCATTCGCAAATCATATGCAATTGAAGTGAGCAGCATGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTGCCCCAATAACGAGTTaGAGGCTTAGATTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLAPITS*RLRLVA
Trigger: TGCAACTAATCTAAGCCTCAAACTCGTTATTGGGGC...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp ACTGTCTTCTACCGAAATGCTCTCCTCAGCACCAATGACAAAGATATTCCATCTTCAATTGCATATGATTaGCGAATGGGACATTCGGGA +
Preference number: 5 (lower is better)
Translates to: TVFYRNALLSTNDKDIPSSIAYD*RMGHSG
Trigger: TCCCGAATGTCCCATTCGCAAATCATATGCAATTGA...AGATGGAATATCTTTGTCATTGGTGCTGAGGAGAGCATTTCGGTAGAAGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATCAATTGCATATGATTaGCGAATGGGACATTCGGGA +
Preference number: 5 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRSIAYD*RMGHSG
Trigger: TCCCGAATGTCCCATTCGCAAATCATATGCAATTGA...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TCAGCACCAATGACAAAGATATTCCATCTCCTTGAGCACTGCAGCAGTTTAAGATGCTGCTCACTTCAATaGCATATGATTTGCGAATGG +
Preference number: 5 (lower is better)
Translates to: SAPMTKIFHLLEHCSSLRCCSLQ*HMICEW
Trigger: CCATTCGCAAATCATATGCAATTGAAGTGAGCAGCA...TCTTAAACTGCTGCAGTGCTCAAGGAGATGGAATATCTTTGTCATTGGTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CTGAGAACCACTGGTTTGAATGATTTACACTCAATCTTCAGGCGCAACTGTCTTTGCTGCTCACTTCAATaGCATATGATTTGCGAATGG +
Preference number: 5 (lower is better)
Translates to: LRTTGLNDLHSIFRRNCLCCSLQ*HMICEW
Trigger: CCATTCGCAAATCATATGCAATTGAAGTGAGCAGCA...AAGACAGTTGCGCCTGAAGATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTATTACCAGCCTCAAGTTaGCAACCCTTTCCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILLPASS*QPFPSC
Trigger: GCAGGAAGGAAAGGGTTGCAAACTTGAGGCTGGTAA...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS TCA 90 bp CTATCTGATATTTTGGTGCGTTGTTGCACTGTGGAAAACTGCCATTaGCTTCTCCATTATGTAGTAGATTATTGTCCACCAGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSDILVRCCTVENCH*LLHYVVDYCPPDSS
Trigger: GCTGGAATCTGGTGGACAATAATCTACTACATAATGGAGAAGTCAATGGCAGTTTTCCACAGTGCAACAACGCACCAAAATATCAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTAAGTGCTGAAGGCATGTaGAAAAGCACGTATCTTGGC +
Preference number: 5 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILSAEGM*KSTYLG
Trigger: GCCAAGATACGTGCTTTTCAACATGCCTTCAGCACT...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp TATTGCCAACCTGAAGTTTTCAGCACAAGGTGTTGTATTTCAAGTCCCATGGGGTATTTCCTTATCCCTTaGACAGCATCTCTACAATCT +
Preference number: 5 (lower is better)
Translates to: YCQPEVFSTRCCISSPMGYFLIP*TASLQS
Trigger: AGATTGTAGAGATGCTGTCAAAGGGATAAGGAAATA...CCCCATGGGACTTGAAATACAACACCTTGTGCTGAAAACTTCAGGTTGGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TTAACCTGTTTCAGCTGGGTAAGTAAACGTTTTCTTTATAGCCCCAATAACGAGTGCTTCACAGGAGTATaGACAATCTTAACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: LTCFSWVSKRFLYSPNNECFTGV*TILTPK
Trigger: CTTGGGAGTTAAGATTGTCAATACTCCTGTGAAGCA...CTCGTTATTGGGGCTATAAAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CCAAAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTCTTTGCCGAACTGAGTaGTTCTACACCAAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: PKKVLQVSQVNKVYSVTLLCRTE*FYTKKN
Trigger: ATTTTTCTTGGTGTAGAACAACTCAGTTCGGCAAAG...AAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp AAGAAAGTGCTCCAGGTTTCCCAAGTCAACAAAGTATACTCAGTTACACTTTCCCTGAGAACCACTGGTTaGAATGATTTACACTCAATC +
Preference number: 5 (lower is better)
Translates to: KKVLQVSQVNKVYSVTLSLRTTG*NDLHSI
Trigger: GATTGAGTGTAAATCATTCAAACCAGTGGTTCTCAG...GGAAAGTGTAACTGAGTATACTTTGTTGACTTGGGAAACCTGGAGCACTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TTAACCTGTTTCAGCTGGGTAAGTAAACGTTTTCTTTATAGCCCCAATAACGAGAGGGCTCTGCTATTTTaGAAACTCTTTCTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: LTCFSWVSKRFLYSPNNERALLF*KLFLQS
Trigger: TGACTGGAGAAAGAGTTTCAAAAATAGCAGAGCCCT...CTCGTTATTGGGGCTATAAAGAAAACGTTTACTTACCCAGCTGAAACAGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTATTATGTAGTAGATTATaGTCCACCAGATTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILLCSRL*STRFQP
Trigger: GGGCTGGAATCTGGTGGACAATAATCTACTACATAA...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp TCTTCTACAACGAAACCTTCAAATATTGCCAACCTGAAGTTTTCAGCACAAGGTCTTTGCCGAACTGAGTaGTTCTACACCAAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: SSTTKPSNIANLKFSAQGLCRTE*FYTKKN
Trigger: ATTTTTCTTGGTGTAGAACAACTCAGTTCGGCAAAG...ACCTTGTGCTGAAAACTTCAGGTTGGCAATATTTGAAGGTTTCGTTGTAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS-3UTR CAA 90 bp CAATCTTTAGCCAGGAGACTGAGAGATCTTTACTATGATTTTGAGAGTAAAAACACTTCAGAGGAGCTTTaGTCTTTCTCCGCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: QSLARRLRDLYYDFESKNTSEEL*SFSAVL
Trigger: AAGAACTGCGGAGAAAGACAAAAGCTCCTCTGAAGT...GTTTTTACTCTCAAAATCATAGTAAAGATCTCTCAGTCTCCTGGCTAAAGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS-3UTR CAA 90 bp AATCTTTGTTCTATGGCTGAAATCCCTTGCTTCACAGGAGTATTGACAATCTTATATTTCCTTATCCCTTaGACAGCATCTCTACAATCT +
Preference number: 5 (lower is better)
Translates to: NLCSMAEIPCFTGVLTILYFLIP*TASLQS
Trigger: AGATTGTAGAGATGCTGTCAAAGGGATAAGGAAATA...TAAGATTGTCAATACTCCTGTGAAGCAAGGGATTTCAGCCATAGAACAAAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS GCA 72 bp GCCCGGCCTCTCCGCGGCGCGCCAGCGGCTCCGCCATaGGGGTTGAGGGCACGAAGCAAGGGCGCACGCCCA +
Preference number: 6 (lower is better)
Translates to: ARPLRGAPAAPP*GLRARSKGARP
Trigger: TGGGCGTGCGCCCTTGCTTCGTGCCCTCAACCCGCATGGCGGAGCCGCTGGCGCGCCGCGGAGAGGCCGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440469.1
CDS CAA 90 bp CTCGCCCGGCCTCTCCGCGGCGCGCCAGCGGCTCCGCCATGCGGGTaGAGGGCACGAAGCAAGGGCGCACGCCCAGCTCGTTCGCGGTTC +
Preference number: 6 (lower is better)
Translates to: LARPLRGAPAAPPCG*RARSKGARPARSRF
Trigger: GAACCGCGAACGAGCTGGGCGTGCGCCCTTGCTTCGTGCCCTCAACCCGCATGGCGGAGCCGCTGGCGCGCCGCGGAGAGGCCGGGCGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440469.1
CDS GCA 72 bp CGGAGACCGGAGCGGCTCGCTCACCGCCCCTGTCAGTaGCAACCGCCGGCGCCTCCACCACTCCCGCCCCTG +
Preference number: 6 (lower is better)
Translates to: RRPERLAHRPCQ*QPPAPPPLPPL
Trigger: CAGGGGCGGGAGTGGTGGAGGCGCCGGCGGTTGGCACTGACAGGGGCGGTGAGCGAGCCGCTCCGGTCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 72 bp TCGCTGTTCTCATCGCCGTGCAGGCAGCGGTACCAGTaGTTGCACACCAGGGCGCAGCTCCGCAGCTCGGAC +
Preference number: 6 (lower is better)
Translates to: SLFSSPCRQRYQ*LHTRAQLRSSD
Trigger: GTCCGAGCTGCGGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTGCACGGCGATGAGAACAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 72 bp CACAGGCTCCGCCACACCTCGCTGTTCTCATCGCCGTaGAGGCAGCGGTACCAGTGCTTGCACACCAGGGCG +
Preference number: 6 (lower is better)
Translates to: HRLRHTSLFSSP*RQRYQCLHTRA
Trigger: CGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTGCACGGCGATGAGAACAGCGAGGTGTGGCGGAGCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 72 bp ACAGGATGTCCGTGCGCAGAGCCTCTTCTGCCAGGCTaGGGGCGCACAGGCTCCGCCACACCTCGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: TGCPCAEPLLPG*GRTGSATPRCS
Trigger: AGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAGCCTGGCAGAAGAGGCTCTGCGCACGGACATCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS CAA 72 bp CTGTTCTCATCGCCGTGCAGGCAGCGGTACCAGTGCTaGCACACCAGGGCGCAGCTCCGCAGCTCGGACAGC +
Preference number: 6 (lower is better)
Translates to: LFSSPCRQRYQC*HTRAQLRSSDS
Trigger: GCTGTCCGAGCTGCGGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTGCACGGCGATGAGAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 72 bp TGTTCTCATCGCCGTGCAGGCAGCGGTACCAGTGCTTaGACACCAGGGCGCAGCTCCGCAGCTCGGACAGCT +
Preference number: 6 (lower is better)
Translates to: CSHRRAGSGTSA*TPGRSSAARTA
Trigger: AGCTGTCCGAGCTGCGGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTGCACGGCGATGAGAACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS GCA 72 bp ATTCCAGCCCCAGCTCTGGTCATCACTGCCCAGCAATaGCACATAACCTTGGCACTGCATGGGGGCCCGTTT +
Preference number: 6 (lower is better)
Translates to: IPAPALVITAQQ*HITLALHGGPF
Trigger: AAACGGGCCCCCATGCAGTGCCAAGGTTATGTGGCATTGCTGGGCAGTGATGACCAGAGCTGGGGCTGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS TCA 72 bp CCTCCCACCACACTTCCCATGCATGGCGGCCCTCACTaGAACCAATCTTGGTCCTTGCACCATCAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: PPTTLPMHGGPH*NQSWSLHHQCS
Trigger: AGAGCACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGAGGGCCGCCATGCATGGGAAGTGTGGTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS GCA 72 bp GAAAAGCACGTATCTTGGCCTTGTAGCTGGGCAGGTTaGACAGGATGTCCGTGCGCAGAGCCTCTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: EKHVSWPCSWAG*TGCPCAEPLLP
Trigger: TGGCAGAAGAGGCTCTGCGCACGGACATCCTGTGCAACCTGCCCAGCTACAAGGCCAAGATACGTGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS CAA 72 bp GCTCTGGTCATCACTGCCCAGCAATGCCACATAACCTaGGCACTGCATGGGGGCCCGTTTTGTGGCAATTCC +
Preference number: 6 (lower is better)
Translates to: ALVITAQQCHIT*ALHGGPFCGNS
Trigger: GGAATTGCCACAAAACGGGCCCCCATGCAGTGCCAAGGTTATGTGGCATTGCTGGGCAGTGATGACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS CCA 72 bp AGGCATGTTGAAAAGCACGTATCTTGGCCTTGTAGCTaGGCAGGTTGCACAGGATGTCCGTGCGCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: RHVEKHVSWPCS*AGCTGCPCAEP
Trigger: AGGCTCTGCGCACGGACATCCTGTGCAACCTGCCCAGCTACAAGGCCAAGATACGTGCTTTTCAACATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS CCA 72 bp CACTGCCCAGCAATGCCACATAACCTTGGCACTGCATaGGGGCCCGTTTTGTGGCAATTCCAATCACTGCCA +
Preference number: 6 (lower is better)
Translates to: HCPAMPHNLGTA*GPVLWQFQSLP
Trigger: TGGCAGTGATTGGAATTGCCACAAAACGGGCCCCCATGCAGTGCCAAGGTTATGTGGCATTGCTGGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS GCA 72 bp TGCATGGCGGCCCTCACTGAAACCAATCTTGGTCCTTaGACCATCAGTGCTCTGAGCAATGGGGTTTCGATG +
Preference number: 6 (lower is better)
Translates to: CMAALTETNLGP*TISALSNGVSM
Trigger: CATCGAAACCCCATTGCTCAGAGCACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGAGGGCCGCCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS CAA 72 bp GACATTCCTGGAGCAGTCATTAGTGCTGAAGGCATGTaGAAAAGCACGTATCTTGGCCTTGTAGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: DIPGAVISAEGM*KSTYLGLVAGQ
Trigger: CTGCCCAGCTACAAGGCCAAGATACGTGCTTTTCAACATGCCTTCAGCACTAATGACTGCTCCAGGAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311630.7
CDS CAA 90 bp CACTGTGGAAAACTGCCATTGACTTCTCCATTATGTAGTAGATTATaGTCCACCAGATTCCAGCCCCAGCTCTGGTCATCACTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: HCGKLPLTSPLCSRL*STRFQPQLWSSLPS
Trigger: GCTGGGCAGTGATGACCAGAGCTGGGGCTGGAATCTGGTGGACAATAATCTACTACATAATGGAGAAGTCAATGGCAGTTTTCCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1
CDS TCA 72 bp ATTTTGGTGCGTTGTTGCACTGTGGAAAACTGCCATTaGCTTCTCCATTATGTAGTAGATTATTGTCCACCA +
Preference number: 6 (lower is better)
Translates to: ILVRCCTVENCH*LLHYVVDYCPP
Trigger: TGGTGGACAATAATCTACTACATAATGGAGAAGTCAATGGCAGTTTTCCACAGTGCAACAACGCACCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311630.7
ENST00000440469.1